BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 011268
         (489 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 497

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/488 (83%), Positives = 441/488 (90%), Gaps = 1/488 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MAD+YRL SI+ELPSHLI EIL +GRLSA DL  LELTSKTFGGSHGLYP KF+SLVD A
Sbjct: 1   MADKYRLVSIDELPSHLILEILMTGRLSATDLVCLELTSKTFGGSHGLYPHKFKSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           A QLCA HS+Y GM  N Q ELL+RC GNWKRVLRFL +VE SS +VETSAGN MQITTG
Sbjct: 61  AFQLCASHSVYTGMLWNAQKELLDRCGGNWKRVLRFLLAVEESSGMVETSAGN-MQITTG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           RYHTLLISNSSV+SCGSSLCGVLGHGPETTQCVSF+RI FPS A VVQVSAS NHAA++L
Sbjct: 120 RYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNHAAYIL 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           +SG+VFTCGDNSSFCCGH+DT+RPIFRPR VEALKGVPCKQV AGLNFT FLT  GHV++
Sbjct: 180 ESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYS 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CG+NTHGQLGHGDTLDRPTPK I   E +GSV QIAAGPSY+LAVT +GVVYSFGSGSNF
Sbjct: 240 CGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNF 299

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQH+E  PRAIQTFRRK +HVVRVSAGDEHVVALDSSG+VYTWGKGYCGALGHGD
Sbjct: 300 CLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGD 359

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           EIDKTLPEPL+SLKSHLAVQVCARKRKTFVLVD G V+GFGWMGFGSLGFPDRGVSDKV+
Sbjct: 360 EIDKTLPEPLNSLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVM 419

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
           RPRILDSLRAH VSQISTGLYHTV VT +G++FGFGDNERAQLGHDTLRGCLEPTEIF+Q
Sbjct: 420 RPRILDSLRAHRVSQISTGLYHTVAVTSQGQVFGFGDNERAQLGHDTLRGCLEPTEIFLQ 479

Query: 481 EMEEDTGL 488
           E   DTG+
Sbjct: 480 EFGHDTGI 487


>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
 gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  819 bits (2115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/479 (82%), Positives = 431/479 (89%), Gaps = 1/479 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MAD+ R  SIE+LPSHLIFEILT+GRLSAVDLA LELTS+TFGGSHGLYPQKFRSLVD A
Sbjct: 1   MADKNRSVSIEDLPSHLIFEILTTGRLSAVDLACLELTSRTFGGSHGLYPQKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           A QLC  H +Y+GM  N Q  L  RC GNWKRVLRFLQ+VE SS +V+TSA N MQ+TTG
Sbjct: 61  AYQLCVSHRVYSGMGWNAQKGLFGRCEGNWKRVLRFLQAVEESSGMVKTSASN-MQVTTG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           RYHTLLI +SSV+SCGSSLCGVLGHG ETTQCV+FTRI FPS A+V+QVSAS NHAAFVL
Sbjct: 120 RYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHNHAAFVL 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           QSG+VFTCGDNSSFCCGH DTNRPIFRPRLVEALKGVPCKQV  GLNFT FLT +G ++T
Sbjct: 180 QSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYT 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CG+NTHGQLGHGDT DRPTPK I  LE VGSVVQIAAGPSY+LAVT NGVVYSFGSGSN 
Sbjct: 240 CGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNL 299

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQHDE +PRAIQTFRRK IHVV VSAGDEH VALDSSG+VY+WGKGYCGALGHGD
Sbjct: 300 CLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGD 359

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           EIDKTLP  ++ LKSHLAVQVCARKRKTFVLVD GSVYGFGWMGFGSLGFPDRG+SDKV+
Sbjct: 360 EIDKTLPALVNCLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVM 419

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           RPR+LDSLRA HVSQISTGLYHTVVVT++G++FGFGDNERAQLGHDTLRGCL+PTEIF+
Sbjct: 420 RPRVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEIFV 478


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  815 bits (2106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/487 (81%), Positives = 431/487 (88%), Gaps = 1/487 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RY   S EELPSHLI EIL+SGRLSAVDL  LELTS+TFG SHGLYP KFRSLVD A
Sbjct: 1   MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           A QLC  H IYA +S N Q +L +RC  NWKRVLRFLQSVE SS I ETSAGN MQITTG
Sbjct: 61  AFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGN-MQITTG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           RYHTLLI +SSV+SCGSSLCGVLGHGPETTQCV+F+RINFP  AHV QVSAS NHAAFV+
Sbjct: 120 RYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVM 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           QSG+VFTCGDNSSFCCGH DT RPIFRPRLVEALKGVPCKQV AGL+FT FLT++GHV+T
Sbjct: 180 QSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYT 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CG+NTHGQLGHGDT+DR TPK +  LE VG VVQIAAGPSY +AVT +G V+SFGSGSNF
Sbjct: 240 CGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNF 299

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQH+EL+PRAIQ+FRRK IHVVR+SAGDEHVVALDSSG+VYTWGKGYCGALGHGD
Sbjct: 300 CLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGD 359

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           EIDKT PE LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG SDKV+
Sbjct: 360 EIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVM 419

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
           RP ILDSLR H++SQISTGLYHTV V ++G++FGFGDNERAQLGHDTLRGC  PTEIF+Q
Sbjct: 420 RPWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVPTEIFVQ 479

Query: 481 EMEEDTG 487
           E  +D G
Sbjct: 480 EATDDAG 486


>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
 gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/488 (80%), Positives = 430/488 (88%), Gaps = 1/488 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RYRL SIE+ PSHLIFEILT GRLSA DL  LELTS+TFG SHGLYPQKFRSLVD A
Sbjct: 1   MANRYRLASIEDFPSHLIFEILTIGRLSAADLVCLELTSRTFGASHGLYPQKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           A QLC  H +Y GM  N Q EL +RC GNWKRVLRFLQ+VE SS +V+TSA N MQ+TTG
Sbjct: 61  AHQLCVSHRVYGGMGWNAQKELFDRCGGNWKRVLRFLQAVEESSGMVKTSACN-MQVTTG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           RYHTLLI +SSV+SCGSSLCGVLGHG ETTQCV+FTRI FPS A+VVQVSAS NHAAFVL
Sbjct: 120 RYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLANVVQVSASHNHAAFVL 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           QSG+VFTCGDNSSFCCGH+DTNRPIFRPRLVEALK V CKQV+ GLNFT FLT +G ++T
Sbjct: 180 QSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYT 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CGSNTHGQLGHGDTLDRPTPK I  LE +G VVQIAAGPSY+LAVT NGVVYSFG GSNF
Sbjct: 240 CGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNF 299

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQHDE QPRAIQTFRRK IHVV VSAGDEH VALDSSG+VY+WGKGYCGALGHGD
Sbjct: 300 CLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGD 359

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           EIDKTLP  ++ LKS LAVQ CARKRKTFVLVD GSVYGFG MGFGSLGFPDR +++KV+
Sbjct: 360 EIDKTLPSLVNCLKSRLAVQACARKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVM 419

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
            PR+LDSLRAH VSQISTGLYHTVVVT++G++FGFGDNER QLGHDTLRGCL+PTEIF+Q
Sbjct: 420 TPRVLDSLRAHRVSQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEIFVQ 479

Query: 481 EMEEDTGL 488
           E  +DTGL
Sbjct: 480 ETADDTGL 487


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/489 (80%), Positives = 430/489 (87%), Gaps = 5/489 (1%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA+RY   S EELPSHLI EIL+SGRLSAVDL  LELTS+TFG SHGLYP KFRSLVD A
Sbjct: 1   MANRYWSVSFEELPSHLILEILSSGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           A QLC  H IYA +S N Q +L +RC  NWKRVLRFLQSVE SS I ETSAGN MQITTG
Sbjct: 61  AFQLCGSHPIYAALSLNAQKDLFDRCGENWKRVLRFLQSVEQSSYISETSAGN-MQITTG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           RYHTLLI +SSV+SCGSSLCGVLGHGPETTQCV+F+RINFP  AHV QVSAS NHAAFV+
Sbjct: 120 RYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVM 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           QSG+VFTCGDNSSFCCGH DT RPIFRPRLVEALKGVPCKQV AGL+FT FLT++GHV+T
Sbjct: 180 QSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYT 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CG+NTHGQLGHGDT+DR TPK +  LE VG VVQIAAGPSY +AVT +G V+SFGSGSNF
Sbjct: 240 CGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNF 299

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQH+EL+PRAIQ+FRRK IHVVR+SAGDEHVVALDSSG+VYTWGKGYCGALGHGD
Sbjct: 300 CLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGD 359

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           EIDKT PE LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG SDKV+
Sbjct: 360 EIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVM 419

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF-- 478
           RP ILDSLR H++SQISTGLYHTV V ++G++FGFGDNERAQLGHDTLRGC  PTEIF  
Sbjct: 420 RPWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEIFAS 479

Query: 479 --IQEMEED 485
             + EME D
Sbjct: 480 PTVAEMERD 488


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/485 (80%), Positives = 426/485 (87%), Gaps = 4/485 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M +R R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLV  A
Sbjct: 1   MGERCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           A QLCA H  YA M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS+GN MQITTG
Sbjct: 61  AFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGN-MQITTG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           +YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+FP  A VV VSAS NHAAFV+
Sbjct: 120 KYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVM 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           QSG+VFTCGDNSS CCGHRDT RPIFRPRLVE+LKG+PCKQV AGLNFT FLT +GHV+T
Sbjct: 180 QSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYT 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CG+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NF
Sbjct: 240 CGTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANF 296

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQHDELQPRAIQ FRRKGIH+VRVSAGDEH VALDS+GYVYTWGKGYCGALGHGD
Sbjct: 297 CLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGD 356

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           EI+KT PE L+SLK+ L VQVCARKRKTFVLVD+GSVYGFG MGFGSLGF DR VSDKVL
Sbjct: 357 EIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVL 416

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
           +PRILD+LR HHVSQISTGLYHTVV+T RG++FGFGDNERAQLGHDTLR CLEPTEIFI+
Sbjct: 417 KPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEIFIK 476

Query: 481 EMEED 485
           ++ ED
Sbjct: 477 DVSED 481


>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/485 (79%), Positives = 424/485 (87%), Gaps = 4/485 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M +R R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLV  A
Sbjct: 1   MGERCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           A QLCA H  YA M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS+GN MQITTG
Sbjct: 61  AFQLCASHVTYARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGN-MQITTG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           +YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+FP  A VV VSAS NHAAFV+
Sbjct: 120 KYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVM 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           QSG+VFTCGDNSS CCGHRDT RPIF+PRLVE+LKG+PCKQV AGLNFT FLT +GHV+T
Sbjct: 180 QSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYT 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CG+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NF
Sbjct: 240 CGTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANF 296

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQHDELQPRAIQ FRRKGIH+VRVSAGDEH VALDS+GYVYTWGKGYCGALGHGD
Sbjct: 297 CLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGD 356

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           EI+KT PE L+SLK+ L VQVCARKRKTFVLVD+GSVYGFG MGFGSLGF DR VS KVL
Sbjct: 357 EIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKVL 416

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
           +PRILD+LR HHVSQISTGLYHTVV+T RG++FGFGDNERAQLGHD LR CLEPTEIFI+
Sbjct: 417 KPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDILRSCLEPTEIFIK 476

Query: 481 EMEED 485
           ++ ED
Sbjct: 477 DVFED 481


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/485 (79%), Positives = 424/485 (87%), Gaps = 4/485 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           M DR R FSIEELPSHL+ EIL SGRLSA+DL  LELTSKTFGGSHGL+P KF+SLVD A
Sbjct: 1   MGDRCRHFSIEELPSHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           A QLCA H  +A M  N Q EL +RC GNWKRVLRFLQSVE SS +VETS GN MQITTG
Sbjct: 61  AFQLCASHVTFARMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSLGN-MQITTG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           +YHTLLISNSSV+SCGS LCGVLG G ETTQCV+FTRI+ P    VV VSAS NHAAFV+
Sbjct: 120 KYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFNHAAFVM 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           QSG+VFTCGDNSS CCGHRDT RPIFRPRLVE+LKG+PCKQV AGLNFT FLT +GHV+T
Sbjct: 180 QSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYT 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CG+NTHGQLGHGDT DRPTPK I   E + SVVQIAAGPSY+L+VT NG VYSFGSG+NF
Sbjct: 240 CGTNTHGQLGHGDTQDRPTPKMI---EVLSSVVQIAAGPSYILSVTENGTVYSFGSGANF 296

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQHDELQPR IQ FRRKGIH+VRVSAGDEH VALDS+G+VYTWGKGYCGALGHGD
Sbjct: 297 CLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGD 356

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           EI+KT PE L+SLK+ LAVQVCARKRKTFVLV++GSVYGFG MGFGSLGF DR VSDKVL
Sbjct: 357 EIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVL 416

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
           +PRILD+LRAHHVSQISTGLYHTVV+T RG++FGFGDNERAQLGHDTLR CLEPT+IFI+
Sbjct: 417 KPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTQIFIK 476

Query: 481 EMEED 485
           +  ED
Sbjct: 477 DTSED 481


>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/486 (76%), Positives = 418/486 (86%), Gaps = 1/486 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MA      +  +LPSHLI E+LTSGRL+A DL  LELT K FGGSH LYP KFRSLVD A
Sbjct: 1   MAKWLHSTTFVDLPSHLILEVLTSGRLNAHDLVCLELTCKLFGGSHELYPLKFRSLVDFA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           A QLC  HS Y+GM  + Q +L +RC G WKRV RFLQ VE SS+IVETS GN MQI TG
Sbjct: 61  AFQLCISHSTYSGMGEDSQRQLFDRCQGKWKRVFRFLQLVEKSSNIVETSEGN-MQIATG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           RYHTLLISN SV+SCGSSLCGVLGHG ETTQCV+FTRINFP + +V QVSAS NHAAFV 
Sbjct: 120 RYHTLLISNGSVYSCGSSLCGVLGHGSETTQCVTFTRINFPPSIYVEQVSASHNHAAFVT 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           QSGQVFTCGDNSSFCCGHRDT+  IFRPRLVEAL G+PCKQV+ G NF+ FLT +GHV+T
Sbjct: 180 QSGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYT 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CG+NT+GQLGHG+TL+ PTPK +  L E+GSV+QIAAGPSY+LAV  +G VYSFGSGSNF
Sbjct: 240 CGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVVNDGRVYSFGSGSNF 299

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQH+E QPR +QTFR K IHVV VSAGDEH VALDS+G VYTWGKGYCGALGHGD
Sbjct: 300 CLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGD 359

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           EIDKT+P+PL+SLK+HLAVQVCARKRKTFVLVDTG VYGFGWMGFGSLGFPDRGVSDKVL
Sbjct: 360 EIDKTIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSDKVL 419

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
           RPR LDSLR H VSQISTGLYHTVVVT++G++FGFGDNERAQLGH++LRGCLEPTEIFI 
Sbjct: 420 RPRSLDSLRVHRVSQISTGLYHTVVVTEKGKIFGFGDNERAQLGHESLRGCLEPTEIFIH 479

Query: 481 EMEEDT 486
           ++++++
Sbjct: 480 DLDDES 485


>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
 gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
 gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
 gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 488

 Score =  754 bits (1947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/479 (75%), Positives = 404/479 (84%), Gaps = 1/479 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSGRLSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNCLISFEDLPSHLILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           ASQLC++H +Y GM    Q EL   C GNWKR+  FLQSVE SSD+VETS G +MQI TG
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQG-KMQIATG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           +YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP  A V QVSA++NH+AFVL
Sbjct: 120 KYHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVL 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           QSGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+  GH +T
Sbjct: 180 QSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYT 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CGSNTHGQLGHGDTLDRP PK +  L+ +G VVQIAAGPSY+LAVT +G VYSFGSGSNF
Sbjct: 240 CGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNF 299

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCGALGHGD
Sbjct: 300 CLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGD 359

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           E DK  P+ L +L + LAVQVCARKRKTFVLV+ G +YGFGWMGFGSLGFPDRGVSDKVL
Sbjct: 360 ENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVL 419

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           RPR+L+ L+ H VSQ+STGLYHT+VVT RGR+FGFGDNERAQLGHD+LRGCLEPTEIF+
Sbjct: 420 RPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEIFL 478


>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
          Length = 488

 Score =  753 bits (1944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/479 (75%), Positives = 404/479 (84%), Gaps = 1/479 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSGRLSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNCLISFEDLPSHLILEVLTSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           ASQLC++H +Y GM    Q EL   C GNWKR+  FLQSVE SSD+VETS G +MQI TG
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQG-KMQIATG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           +YHTLLI+NS V+SCG SL GVL HG ETTQCV+FT I FP  A V QVSA++NH+AFVL
Sbjct: 120 KYHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVL 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           QSGQV TCGDNSS CCGH DT+RPIFRP+LVEALKG PCKQV AGL+FT FL+  GH +T
Sbjct: 180 QSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYT 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CGSNTHGQLGHGDTLDRP PK +  L+ +G VVQIAAGPSY+LA+T +G VYSFGSGSNF
Sbjct: 240 CGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQDGSVYSFGSGSNF 299

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCGALGHGD
Sbjct: 300 CLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGD 359

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           E DK  P+ L +L + LAVQVCARKRKTFVLV+ G +YGFGWMGFGSLGFPDRGVSDKVL
Sbjct: 360 ENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVL 419

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           RPR+L+ L+ H VSQ+STGLYHT+VVT RGR+FGFGDNERAQLGHD+LRGCLEPTEIF+
Sbjct: 420 RPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEIFL 478


>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 488

 Score =  752 bits (1941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/479 (74%), Positives = 405/479 (84%), Gaps = 1/479 (0%)

Query: 1   MADRYRLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLA 60
           MADR  L S E+LPSHLI E+LTSG+LSAVDL  LELTSK FGGSHG YP KFRSL D A
Sbjct: 1   MADRNWLISFEDLPSHLILEVLTSGKLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYA 60

Query: 61  ASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG 120
           ASQLC++H +Y GM    Q EL   C GNWKR+L FLQSVE SSD+VETS G +MQI TG
Sbjct: 61  ASQLCSMHPVYVGMGLTTQKELFANCEGNWKRLLSFLQSVEQSSDMVETSQG-KMQIATG 119

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           +YHTLLI+NS V+SCG SL GVL HGPETTQCV+FT I FP  A V QVSA++NH+AFVL
Sbjct: 120 KYHTLLINNSKVYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVL 179

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           QSG+V TCGDNSS CCGH DT+RPIFRP+LVE LKG PCKQV AGL+FT FL+  GH +T
Sbjct: 180 QSGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYT 239

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           CGSNTHGQLGHGDT+DRP PK +  L+ +G VVQIAAGPSY+LAVT +G VYSFGSGSNF
Sbjct: 240 CGSNTHGQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNF 299

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHGEQ DELQPR IQ F+RKGIH++RVSAGDEH VALDS+G VYTWGKGYCGALGHGD
Sbjct: 300 CLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGD 359

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           E DK  P+ L +LK+ LAVQVCARKRKTFVLV+ G +YGFGWMGFGSLGFPDRGVSDKVL
Sbjct: 360 ENDKITPQVLVNLKNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVL 419

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           RPR+L+ L+ H VSQ+STGLYHT+VVT  GR+FGFGDNERAQLGH++LRGCLEPTEIF+
Sbjct: 420 RPRVLECLKPHRVSQVSTGLYHTIVVTQGGRIFGFGDNERAQLGHNSLRGCLEPTEIFL 478


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/484 (67%), Positives = 384/484 (79%), Gaps = 12/484 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GN MQ+ TGRYHTL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGN-MQVATGRYHTL 116

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L+ +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+V
Sbjct: 117 LVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEV 176

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           FTCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNT
Sbjct: 177 FTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNT 236

Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           HGQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG
Sbjct: 237 HGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHG 296

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           +QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT
Sbjct: 297 DQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKT 356

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            PE +SSLKS +AVQVCARKRKTFVL D GSV+ FGWMGFGSLGFPDRG SDKV+RPR+L
Sbjct: 357 SPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVL 416

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 485
           DSLR H+VSQISTGLYHTV VT+RG +FGFGDNERAQLG + +RGCL+PTEI  Q+  E+
Sbjct: 417 DSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEE 476

Query: 486 TGLA 489
             +A
Sbjct: 477 IVIA 480


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/484 (67%), Positives = 384/484 (79%), Gaps = 12/484 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GN MQ+ TGRYHTL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGN-MQVATGRYHTL 116

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L+ +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+V
Sbjct: 117 LVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEV 176

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           FTCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNT
Sbjct: 177 FTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNT 236

Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           HGQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG
Sbjct: 237 HGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHG 296

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           +QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT
Sbjct: 297 DQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKT 356

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            PE +SSLKS +AVQVCARKRKTFVL D GSV+ FGWMGFGSLGFPDRG SDKV+RPR+L
Sbjct: 357 SPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVL 416

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 485
           DSLR H+VSQISTGLYHTV VT+RG +FGFGDNERAQLG + +RGCL+PTEI  Q+  E+
Sbjct: 417 DSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEE 476

Query: 486 TGLA 489
             +A
Sbjct: 477 IVIA 480


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/484 (67%), Positives = 383/484 (79%), Gaps = 12/484 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+L 
Sbjct: 9   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLW 57

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTL 125
           A  + +A M    + ELL RC G+WK+VLRFLQSVE SS  V TS+GN MQ+ TGRYHTL
Sbjct: 58  AARAAFAAMGPAARGELLERCGGSWKKVLRFLQSVEQSSGTVHTSSGN-MQVATGRYHTL 116

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L+ +SSV+SCGSSLCGVLGHGP+TTQC +F+R+ FPS + VV +SAS NHAAFV + G+V
Sbjct: 117 LVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNHAAFVTELGEV 176

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           FTCGDNSS CCGH +  R IFRP  ++ALKG+ CKQV  GL+FT  LT  G V+TCGSNT
Sbjct: 177 FTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNT 236

Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           HGQLGHGDT+DR TPK +   E +  VVQ+AAG SY  AVT +G VYSFGS +NFCLGHG
Sbjct: 237 HGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHG 296

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           +QHDEL+PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT
Sbjct: 297 DQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKT 356

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            PE +SSLKS +AVQVCARKRKTFVL D GSV+ FGWMGFGSLGFPDRG SDKV+RPR+L
Sbjct: 357 SPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVL 416

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 485
           DSLR H+VSQISTGLYHTV VT+RG +FGFGDNERAQLG + +RGCL+PTEI  Q+  E+
Sbjct: 417 DSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSMEE 476

Query: 486 TGLA 489
             +A
Sbjct: 477 IVIA 480


>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|223950263|gb|ACN29215.1| unknown [Zea mays]
 gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 483

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/484 (67%), Positives = 381/484 (78%), Gaps = 12/484 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FSIEELP HLI E+LTSG L+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFSIEELPGHLIGEVLTSGGLAAADLARLEATCRAL-----------RPLAEYAASKLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTL 125
           A  + +A M    + ELL RC G+WKRVLRFLQSVE SS  VETS+G+ MQ+ TGRYHTL
Sbjct: 57  AARAAFAAMGPAARGELLERCGGSWKRVLRFLQSVEQSSGTVETSSGS-MQVATGRYHTL 115

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L+ +SSV+SCGSSLCGVLGHGP+TTQC +F+R++FPS + V+ +SAS NHAAFV +SG+V
Sbjct: 116 LVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHNHAAFVTESGEV 175

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           FTCGDNSS CCGH +  R IFRP  VEALKG+PCKQV  GL+FT  LT  G V+TCGSNT
Sbjct: 176 FTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNT 235

Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           HGQLGHGDT+DR TPK I   E    VVQIAAG SY  AVT +G V+SFGS +NFCLGHG
Sbjct: 236 HGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHG 295

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           +QHDEL PRAIQ+F+R+ IHVVRVSAGDEH VALD+ G+VYTWG+GYCGALGHGDE DKT
Sbjct: 296 DQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKT 355

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            PE + SLK  +AVQVCARKRKTFVL D GSV  FGWMGFGSLGF DRG SDKV+RPR+L
Sbjct: 356 SPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVL 415

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 485
           +SL+ H+VSQISTGLYHTV VT++G +FGFGDNERAQLG + +RGCL+PTEI  Q+  ED
Sbjct: 416 ESLQDHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQKSIED 475

Query: 486 TGLA 489
             +A
Sbjct: 476 IPIA 479


>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 485

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/485 (66%), Positives = 378/485 (77%), Gaps = 13/485 (2%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R FS+EELP HLI E+LTSGRL+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFSMEELPGHLIGEVLTSGRLAAGDLARLEATCRAL-----------RPLAEHAASRLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTL 125
              + +A M    + ELL RC G+WK+VLRFLQSVE SSD VETS+GN MQ+ TGRYHTL
Sbjct: 57  EARTAFAVMGPAARGELLARCGGSWKKVLRFLQSVEQSSDTVETSSGN-MQVATGRYHTL 115

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L+ +SSV+SCGSSLCGVLGHGP+TTQCV+F+R++FP+ + VV +SA  NHAAFV ++GQV
Sbjct: 116 LVHDSSVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHNHAAFVTETGQV 175

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           FTCGDNSS CCGH D  R IFRP  +EALKG  CKQV  GL+FT  LT  G V+TCGSNT
Sbjct: 176 FTCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATGLSFTVILTREGQVYTCGSNT 235

Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           HGQLGHGDT+DR  PK I   E    VVQ+AAG SY  AVT +G V+SFGS +NFCLGHG
Sbjct: 236 HGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTDDGTVHSFGSCTNFCLGHG 295

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           +QH+EL PRAIQ+F+R+ IHVVRVSAGDEH VALD+ GYVYTWG+GYCGALGHGDE DKT
Sbjct: 296 DQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKT 355

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            PE + SLK  +AVQVCARKRKTFVL D GSV  FGWMGFGSLGFPDR  SDKV++P +L
Sbjct: 356 SPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVL 415

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-FIQEMEE 484
           DSLR H+VSQISTGLYHTV VT++G +FGFGDNERAQLG + +RGCL+PTEI F +   E
Sbjct: 416 DSLRGHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCLKPTEIMFHKSSME 475

Query: 485 DTGLA 489
           D  +A
Sbjct: 476 DIAIA 480


>gi|414589113|tpg|DAA39684.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 371

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/347 (63%), Positives = 262/347 (75%), Gaps = 12/347 (3%)

Query: 6   RLFSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           R F IEELP HLI E+LTSG L+A DLA LE T +             R L + AAS+LC
Sbjct: 8   RAFPIEELPGHLIGEVLTSGGLAAADLARLEATCRAL-----------RPLAEYAASKLC 56

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTL 125
           A  + +A M    +  LL RC G+WK+VLRFLQSVE SS  VET++G+ MQ+ TGRYHTL
Sbjct: 57  AARAAFAAMGPAARGGLLERCGGSWKKVLRFLQSVEQSSGTVETTSGS-MQVATGRYHTL 115

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L+ +SSV+SCGSSLCGVLGHGP+TTQC +F+R++FPS + V+ +SAS NHAAFVL+SG+V
Sbjct: 116 LVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHNHAAFVLESGEV 175

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           FTCGDNSS CCGH +  R IFRP  VEALKG+PCKQV  GL+FT  LT  G V+TCGSNT
Sbjct: 176 FTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNT 235

Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           HGQLGHGDT+DR TPK I   E    VVQIAAG SY  AVT +G V+SFGS +NFCLGHG
Sbjct: 236 HGQLGHGDTIDRATPKLIELFEGSTPVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHG 295

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +QHDEL PRAIQ+F+ + IHVVRVSAGDEH VALD+ GYV+  G+ Y
Sbjct: 296 DQHDELLPRAIQSFKWRNIHVVRVSAGDEHAVALDALGYVWCSGERY 342



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 109/223 (48%), Gaps = 7/223 (3%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V++CGS+  G LGHG    +    S      +  V+ I+A  ++   V  +G V++ G  
Sbjct: 122 VYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASHNHAAFVLESGEVFTCGDN 181

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
           S+ C GHGE    +  R +Q    KGI   +V+ G    V L   G VYT G    G LG
Sbjct: 182 SSLCCGHGEVGRTIF-RPMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLG 240

Query: 358 HGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           HGD ID+  P+ +   + S   VQ+ A    TF + D G+V+ FG      LG  D+   
Sbjct: 241 HGDTIDRATPKLIELFEGSTPVVQIAAGASYTFAVTDDGTVHSFGSCTNFCLGHGDQ--H 298

Query: 417 DKVLRPRILDSL--RAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           D++L PR + S   R  HV ++S G  H V +   G ++  G+
Sbjct: 299 DELL-PRAIQSFKWRNIHVVRVSAGDEHAVALDALGYVWCSGE 340



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 93/220 (42%), Gaps = 9/220 (4%)

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
           +S   +E     +Q+A G  + L V  +  VYS GS     LGHG    +    +  +F 
Sbjct: 93  QSSGTVETTSGSMQVATGRYHTLLVH-DSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFP 151

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL--SSLKSHLA 378
                V+ +SA   H   +  SG V+T G       GHG E+ +T+  P+   +LK    
Sbjct: 152 SLSC-VINISASHNHAAFVLESGEVFTCGDNSSLCCGHG-EVGRTIFRPMQVEALKGIPC 209

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR-AHHVSQIS 437
            QV      T +L   G VY  G    G LG  D    D+   P++++    +  V QI+
Sbjct: 210 KQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGD--TIDRA-TPKLIELFEGSTPVVQIA 266

Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            G  +T  VTD G +  FG      LGH      L P  I
Sbjct: 267 AGASYTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAI 306



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 6/155 (3%)

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARK 385
           ++V+ G  H + +  S  VY+ G   CG LGHG +  +       S  S    + + A  
Sbjct: 105 MQVATGRYHTLLVHDSS-VYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSCVINISASH 163

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
                ++++G V+  G     SL      V   + RP  +++L+     Q++TGL  TV+
Sbjct: 164 NHAAFVLESGEVFTCG--DNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVI 221

Query: 446 VTDRGRLFGFGDNERAQLGH-DTL-RGCLEPTEIF 478
           +T  G+++  G N   QLGH DT+ R   +  E+F
Sbjct: 222 LTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELF 256


>gi|168058994|ref|XP_001781490.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667031|gb|EDQ53670.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 489

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/477 (44%), Positives = 303/477 (63%), Gaps = 9/477 (1%)

Query: 10  IEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHS 69
           IE LP  ++ +IL +GRL  VDLA LE +S  F  + G+ P +F+S+ +LAA   C +H 
Sbjct: 5   IEMLPPCILQDILYNGRLGPVDLASLEASSYMFRAASGIAPYRFKSIAELAAHHSCQMHP 64

Query: 70  IYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISN 129
           ++       ++ELL RC GNWK VL FL S++ SS +    +G  + +  GRYHTLL+  
Sbjct: 65  VFENFPPRARLELLARCEGNWKLVLHFLNSLQRSSGLSVGGSGRDVLVAAGRYHTLLVDR 124

Query: 130 S-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFVLQSGQVFT 187
              +++CG+    VLG  P  +       I  P+AA  +VQ+SA+ NHAAFV +SGQV+T
Sbjct: 125 KGELYACGTG-GSVLGQNPAVSNLQRPASIPLPAAATRIVQISANFNHAAFVTESGQVYT 183

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            GDN S CCG  ++ +PI +P LV  L+  PC+QV+ G  +T  LT  G + + G N+HG
Sbjct: 184 FGDNVSCCCGVGESGQPISKPTLVTTLERNPCQQVSTGQGYTVALTRNGELFSWGCNSHG 243

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
           QLG G+T ++  P+ I    E   V Q++AG  + LAVT +G ++S+G GSN+CLGH + 
Sbjct: 244 QLGQGNTQEQFRPRQIEEFNESNPVAQVSAGICHTLAVTKSGQLFSWGYGSNYCLGHDDF 303

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             EL+P+ ++      + ++  +AGDEH  A+DS GYVYTWGKGYCGALGHG   D+  P
Sbjct: 304 LTELRPKRVEHGGFDDLFIISAAAGDEHSAAIDSLGYVYTWGKGYCGALGHGAGTDQRTP 363

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD- 426
             +++LKS  AVQV AR+RKTFVL D G+V+ FGWM + SLG   +  SD V+ P+ LD 
Sbjct: 364 LVVAALKSTRAVQVVARRRKTFVLGDNGTVHSFGWMAYHSLGVQGKSASDTVVSPQSLDL 423

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG-----HDTLRGCLEPTEIF 478
           +L  H VS I+ G+YHT+V+T +G +FGFGDN+ +QLG     ++T      P E+F
Sbjct: 424 ALHGHKVSTIAAGMYHTLVITRKGAIFGFGDNDSSQLGPVSVTNETPLAVRIPAEVF 480


>gi|356510726|ref|XP_003524086.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 291

 Score =  348 bits (892), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 161/207 (77%), Positives = 183/207 (88%)

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
           PSY+L+   NG VYSFGSG+NFCLGHG+QHDELQP  IQ FRRKGIH+VR+SAGDEH VA
Sbjct: 81  PSYILSAIENGTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVA 140

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +DS+G+VYTWGKGYCGALGHGDEID T P+ L+SLK+ L VQVC RKRKTFVLV++GS+Y
Sbjct: 141 VDSNGFVYTWGKGYCGALGHGDEIDNTTPKLLTSLKNQLVVQVCVRKRKTFVLVNSGSMY 200

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           GFG MGFGSLGF DR VSDKVL+PRILD+LRAHHVSQISTGLYHT+V+T RG +FGFGDN
Sbjct: 201 GFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMVITSRGHIFGFGDN 260

Query: 459 ERAQLGHDTLRGCLEPTEIFIQEMEED 485
           ERAQLGHDTL  CLEPT+IFI+   ED
Sbjct: 261 ERAQLGHDTLTSCLEPTQIFIKHTYED 287



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 9/184 (4%)

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGH 237
           +++G V++ G  ++FC GH D +  + +P  ++    KG+   +++AG      +   G 
Sbjct: 88  IENGTVYSFGSGANFCLGHGDQHDEL-QPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGF 146

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS- 296
           V+T G    G LGHGD +D  TPK +  L+    VVQ+         +  +G +Y FGS 
Sbjct: 147 VYTWGKGYCGALGHGDEIDNTTPKLLTSLKN-QLVVQVCVRKRKTFVLVNSGSMYGFGSM 205

Query: 297 --GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
             GS   L        L+PR + T R    HV ++S G  H + + S G+++ +G     
Sbjct: 206 GFGSLGFLDRRVSDKVLKPRILDTLRAH--HVSQISTGLYHTMVITSRGHIFGFGDNERA 263

Query: 355 ALGH 358
            LGH
Sbjct: 264 QLGH 267



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 5/144 (3%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           ++I+ G  H + + SN  V++ G   CG LGHG E          +  +   VVQV   +
Sbjct: 129 VRISAGDEHAVAVDSNGFVYTWGKGYCGALGHGDEIDNTTPKLLTSLKNQL-VVQVCVRK 187

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
                ++ SG ++  G       G   R  +  + +PR+++ L+     Q++ GL  T  
Sbjct: 188 RKTFVLVNSGSMYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMV 247

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTL 255
           +T RGH+   G N   QLGH DTL
Sbjct: 248 ITSRGHIFGFGDNERAQLGH-DTL 270



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 79/193 (40%), Gaps = 4/193 (2%)

Query: 127 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQV 185
           I N +V+S GS     LGHG +  +        F     H+V++SA + HA  V  +G V
Sbjct: 88  IENGTVYSFGSGANFCLGHGDQHDELQPHPIQKFRRKGIHIVRISAGDEHAVAVDSNGFV 147

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           +T G       GH D       P+L+ +LK     QV      T  L   G ++  GS  
Sbjct: 148 YTWGKGYCGALGHGDEIDNT-TPKLLTSLKNQLVVQVCVRKRKTFVLVNSGSMYGFGSMG 206

Query: 246 HGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
            G LG  D    D+     I        V QI+ G  + + +T  G ++ FG      LG
Sbjct: 207 FGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTMVITSRGHIFGFGDNERAQLG 266

Query: 304 HGEQHDELQPRAI 316
           H      L+P  I
Sbjct: 267 HDTLTSCLEPTQI 279


>gi|147858211|emb|CAN79677.1| hypothetical protein VITISV_011751 [Vitis vinifera]
          Length = 454

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/344 (39%), Positives = 179/344 (52%), Gaps = 42/344 (12%)

Query: 145 HGPETTQCVSFTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFC----CGH 198
           H P  T  + F  + + +    HV++V   EN        G V     +  +       +
Sbjct: 138 HHPSHTYTILFLSMRYVTRYRRHVMKVEPFENEQVAAASMGTVKNWAISFEYMEIILPAN 197

Query: 199 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 258
            +  +P      +      P  QV+   N   F+   G   TCG+ +  + GHGDT+   
Sbjct: 198 DNETKPCMAFSKINFPSLAPVTQVSTSHNHAAFVMQSGEASTCGNYSSFRCGHGDTV--- 254

Query: 259 TP----KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 314
            P      +  L+EV    Q+ A  S+   +   G V++ G   +  LG+G+  D     
Sbjct: 255 CPMFRLDFVEALKEV-PYKQVVARFSFAAFLPIKGHVFACGMNIHGQLGYGDTVD----- 308

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
                 R+ + +V +  G + V                 GAL HGDEI KT PE LSSLK
Sbjct: 309 ------RRTLKIVELLEGVDPV-----------------GALDHGDEIGKTAPEILSSLK 345

Query: 375 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
           SHLAVQVC  KRKTFVLVDTGS YG G MGFGS GFPDRG SDKV RP ILD+LR H++S
Sbjct: 346 SHLAVQVCVWKRKTFVLVDTGSAYGLGQMGFGSFGFPDRGDSDKVTRPWILDNLRGHYIS 405

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           Q+STGLY T+ V ++G++FG GDNER +LGHDTLRG  E  EIF
Sbjct: 406 QMSTGLYRTITVINKGQVFGLGDNERVRLGHDTLRGSPELAEIF 449


>gi|115488190|ref|NP_001066582.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|77554669|gb|ABA97465.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554670|gb|ABA97466.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862484|gb|ABA97467.2| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113649089|dbj|BAF29601.1| Os12g0284000 [Oryza sativa Japonica Group]
 gi|215694343|dbj|BAG89336.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694576|dbj|BAG89767.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704369|dbj|BAG93803.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222616915|gb|EEE53047.1| hypothetical protein OsJ_35777 [Oryza sativa Japonica Group]
          Length = 534

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 167/503 (33%), Positives = 237/503 (47%), Gaps = 50/503 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T   F       P    S+ +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M++  +     RC G+WK VLRF+ + E            + Q   G  H++ +
Sbjct: 108 RAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGE------ACCRREKSQAIAGPGHSIAV 161

Query: 128 SNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           + S +V++ GS+  G LGHG       P   + +   RI        +Q +A       V
Sbjct: 162 TTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--------IQAAAGAGRTMLV 213

Query: 180 LQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
             +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+  GHV
Sbjct: 214 SDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSREGHV 273

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGVVYSF 294
           +T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+        VYS 
Sbjct: 274 YTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGMSVYSV 332

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG G  G
Sbjct: 333 GCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWGRYG 392

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF---- 410
            LGHG+E  +++P+ + SL +  AV V      TFV+ D G VY FG     SLG     
Sbjct: 393 CLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTIT 452

Query: 411 PDRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQL 463
                   VL P ++ SL+     V+QIS    +Y   HT  +TD G+L+ FG  ++ QL
Sbjct: 453 EGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQL 512

Query: 464 GHDTLRGCLEPTEIFIQEMEEDT 486
           G          TE+  QE E  T
Sbjct: 513 G----------TELVAQESERGT 525


>gi|297814848|ref|XP_002875307.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321145|gb|EFH51566.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 533

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 164/484 (33%), Positives = 231/484 (47%), Gaps = 35/484 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT  RL   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 47  FPLAANPS-IVLHVLTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNK 105

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
             I+  M+   + E+  RC G+WK VLRFL + E            + Q   G  H++ +
Sbjct: 106 RVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGE------ACCRREKSQAVAGPGHSIAV 159

Query: 128 -SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
            S   V++ G +  G LGHG  T +      +       ++Q +A       +   G+V+
Sbjct: 160 TSKGEVYTFGYNNSGQLGHG-HTEEQARIQPVRSLQGIRIIQAAAGAARTMLISDDGKVY 218

Query: 187 TCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T    
Sbjct: 219 ACGKESFGEAEYGGQGT-QPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWG 277

Query: 245 THGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSG 297
             G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+    NG+ VYS G G
Sbjct: 278 NDGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGCG 333

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LGHG + DE  PR I+ F+   +    V+AG  H   +   G V TWG G  G LG
Sbjct: 334 LGGKLGHGSRTDEKYPRVIEQFKILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 393

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPDR 413
           HG+E  +++P+ +  L    AV V      TFV+ D G VY FG     SLG    F ++
Sbjct: 394 HGNEECESVPKVVEGLNHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQ 453

Query: 414 GVS-DKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLGH 465
           G     VL P ++ SL+     V QIS    +Y   HT  +T+ G+L+ FG  ++ QLG 
Sbjct: 454 GNRHANVLSPAVVTSLKQANERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDQGQLGA 513

Query: 466 DTLR 469
           +  R
Sbjct: 514 ELDR 517



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           AG  H +A+ S G VYT+G    G LGHG   ++   +P+ SL+    +Q  A   +T +
Sbjct: 151 AGPGHSIAVTSKGEVYTFGYNNSGQLGHGHTEEQARIQPVRSLQGIRIIQAAAGAARTML 210

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           + D G VY  G   FG   +  +G +  V  P+++ SL+   V Q + G Y T V++  G
Sbjct: 211 ISDDGKVYACGKESFGEAEYGGQG-TQPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 269

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           +++ F      +LGH T    +EP  + 
Sbjct: 270 KVYTFSWGNDGRLGHQTEAADVEPRPLL 297


>gi|356511051|ref|XP_003524245.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 534

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 155/475 (32%), Positives = 231/475 (48%), Gaps = 27/475 (5%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F + + PS ++  +LT+  L A DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSDNPS-IVLHVLTTCNLYAQDLAKLEATCSFFKRPANFDPDFDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M+   +  L  RC G+WK VLRFL + E            + Q+  G  H++ +
Sbjct: 107 RAIFNPMTTEQRQHLKQRCGGSWKLVLRFLLAGE------ACYRREKSQVIAGPGHSIAV 160

Query: 128 -SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
            S   V+S GS+  G LGHG  T        I       ++Q +A+      +  SGQV+
Sbjct: 161 TSKGVVYSFGSNSSGQLGHG-TTEDGWQPRPIRALQGIRIIQATAATGRTMLISDSGQVY 219

Query: 187 TCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
             G    FC      + ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T    
Sbjct: 220 AFG-KQYFCENEIGNEGSKMVTTPQLVESLKNIFVVQAAIGNYFTAVLSREGRVYTFSWG 278

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFC 301
           + G+L H    +   P+ +    E   VVQIAAG  Y+L  A   +G+ VYS G G    
Sbjct: 279 SDGKLCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCGMGGK 338

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGHG + DE  PR I+ F+   +  + ++AG  H   +   G V TWG G  G LGHG+E
Sbjct: 339 LGHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWGWGRHGCLGHGNE 398

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK--- 418
               +P+ +  LK+  AV V A    TFV+ D+G  Y FG+   G+LG        +   
Sbjct: 399 ECALVPKVVEELKNVKAVHVAAGDYTTFVVSDSGDAYSFGYGESGTLGHDPENPEQEHMH 458

Query: 419 --VLRPRILDSLRAHH--VSQIST-----GLYHTVVVTDRGRLFGFGDNERAQLG 464
             VL P+++ S++ ++  V QIS       + HT  +T+ G+L+ FG  ++ QLG
Sbjct: 459 ADVLTPKLVTSMKQNYERVIQISLTNSVYWIAHTFALTESGKLYAFGAGDKGQLG 513



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 146/306 (47%), Gaps = 13/306 (4%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           QV A   H+  V   G V++ G NSS   GH  T    ++PR + AL+G+   Q TA   
Sbjct: 149 QVIAGPGHSIAVTSKGVVYSFGSNSSGQLGH-GTTEDGWQPRPIRALQGIRIIQATAATG 207

Query: 228 FTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            T  ++  G V+  G       ++G+  +    TP+ +  L+ +  VVQ A G  +   +
Sbjct: 208 RTMLISDSGQVYAFGKQYFCENEIGNEGSKMVTTPQLVESLKNI-FVVQAAIGNYFTAVL 266

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---DSS 342
           +  G VY+F  GS+  L H    ++++PR +     + I VV+++AG  +++ L    S 
Sbjct: 267 SREGRVYTFSWGSDGKLCHQTDPNDVEPRPL-LGALEHIPVVQIAAGFCYLLCLACQPSG 325

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK--SHLAVQVCARKRKTFVLVDTGSVYGF 400
             VY+ G G  G LGHG E D+  P  +   +  +   + + A      V+   G V  +
Sbjct: 326 MSVYSVGCGMGGKLGHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTW 385

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW   G LG    G  +  L P++++ L+      ++ G Y T VV+D G  + FG  E 
Sbjct: 386 GWGRHGCLG---HGNEECALVPKVVEELKNVKAVHVAAGDYTTFVVSDSGDAYSFGYGES 442

Query: 461 AQLGHD 466
             LGHD
Sbjct: 443 GTLGHD 448



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 4/160 (2%)

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
           +RR+   V+   AG  H +A+ S G VY++G    G LGHG   D   P P+ +L+    
Sbjct: 143 YRREKSQVI---AGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDGWQPRPIRALQGIRI 199

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
           +Q  A   +T ++ D+G VY FG   F      + G S  V  P++++SL+   V Q + 
Sbjct: 200 IQATAATGRTMLISDSGQVYAFGKQYFCENEIGNEG-SKMVTTPQLVESLKNIFVVQAAI 258

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           G Y T V++  GR++ F      +L H T    +EP  + 
Sbjct: 259 GNYFTAVLSREGRVYTFSWGSDGKLCHQTDPNDVEPRPLL 298



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 101/258 (39%), Gaps = 59/258 (22%)

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
           Q+ AGP + +AVT  GVVYSFGS S+  LGHG   D  QPR I+    +GI +++ +A  
Sbjct: 149 QVIAGPGHSIAVTSKGVVYSFGSNSSGQLGHGTTEDGWQPRPIRAL--QGIRIIQATAAT 206

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDK--TLPEPLSSLKSHLAVQVCARKRKTFVL 391
              + +  SG VY +GK Y      G+E  K  T P+ + SLK+   VQ       T VL
Sbjct: 207 GRTMLISDSGQVYAFGKQYFCENEIGNEGSKMVTTPQLVESLKNIFVVQAAIGNYFTAVL 266

Query: 392 VDTGSVY--------------------------------------GFGWM---------- 403
              G VY                                      GF ++          
Sbjct: 267 SREGRVYTFSWGSDGKLCHQTDPNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGM 326

Query: 404 -----GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRGRLFGFG 456
                G G  G    G       PR+++  +  ++    I+ G +H  VV   GR+  +G
Sbjct: 327 SVYSVGCGMGGKLGHGTETDEKYPRLIEQFQLLNLQPMVIAAGSWHAAVVGQDGRVCTWG 386

Query: 457 DNERAQLGHDTLRGCLEP 474
                 LGH      L P
Sbjct: 387 WGRHGCLGHGNEECALVP 404


>gi|218186674|gb|EEC69101.1| hypothetical protein OsI_38005 [Oryza sativa Indica Group]
          Length = 534

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 166/502 (33%), Positives = 238/502 (47%), Gaps = 51/502 (10%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T   F       P    S+ +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLEPDDLAHLEATCSFFRKPANFPPDFQLSMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSA----GNQMQITTGRYH 123
            +I+  M++  +     RC G+WK VLRF+ + E      ++ A    G+ + +TTG   
Sbjct: 108 RAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGEACCRREKSQAIAGPGHSIAVTTG--- 164

Query: 124 TLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHA 176
                  +V++ GS+  G LGHG       P   + +   RI        +Q +A     
Sbjct: 165 ------GAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--------IQAAAGAGRT 210

Query: 177 AFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
             V  +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G  FT  L+  
Sbjct: 211 MLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGNFFTAVLSRE 270

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGVV 291
           GHV+T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+        V
Sbjct: 271 GHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLALACQPSGMSV 329

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           YS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG G
Sbjct: 330 YSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKDGRVCTWGWG 389

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF- 410
             G LGHG+E  +++P+ + SL +  A+ V      TFV+ D G VY FG     SLG  
Sbjct: 390 RYGCLGHGNEECESVPKVVESLVNVRAIHVATGDYTTFVVSDKGDVYSFGCGESSSLGHN 449

Query: 411 ---PDRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNER 460
                      VL P ++ SL+     V+QIS    +Y   HT  +TD G+L+ FG  ++
Sbjct: 450 TITEGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGKLYAFGAGDK 509

Query: 461 AQLGHDTL-----RGCLEPTEI 477
            QLG + +     RG  E  EI
Sbjct: 510 GQLGTELVAQQSERGTPERVEI 531


>gi|42572533|ref|NP_974362.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9279617|dbj|BAB01075.1| unnamed protein product [Arabidopsis thaliana]
 gi|110740358|dbj|BAF02074.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643596|gb|AEE77117.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 532

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 163/481 (33%), Positives = 229/481 (47%), Gaps = 35/481 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT  RL   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 46  FPLAANPS-IVLHVLTECRLDPRDLANLEATCSFFSQPANFAPDINLSLSELAALDMCNK 104

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
             I+  M+   + E+  RC G+WK VLRFL + E            + Q   G  H++ +
Sbjct: 105 RVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGE------ACCRREKSQAVAGPGHSVAV 158

Query: 128 -SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
            S   V++ G +  G LGHG  T        +       ++Q +A       +   G+V+
Sbjct: 159 TSKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVY 217

Query: 187 TCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T    
Sbjct: 218 ACGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWG 276

Query: 245 THGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSG 297
             G+LGH     D   RP    + PLE V  VVQIAAG  Y+LA+    NG+ VYS G G
Sbjct: 277 NDGRLGHQTEAADVEPRPL---LGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGCG 332

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LGHG + DE  PR I+ F+   +    V+AG  H   +   G V TWG G  G LG
Sbjct: 333 LGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 392

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPDR 413
           HG+E  +++P+ +  L    AV V      TFV+ D G VY FG     SLG    F ++
Sbjct: 393 HGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQ 452

Query: 414 GVS-DKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLGH 465
           G     VL P ++ SL+     + QIS    +Y   HT  +T+ G+LF FG  ++ QLG 
Sbjct: 453 GNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGT 512

Query: 466 D 466
           +
Sbjct: 513 E 513



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           AG  H VA+ S G VYT+G    G LGHG   D+   +P+ SL+    +Q  A   +T +
Sbjct: 150 AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 209

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           + D G VY  G   FG   +  +G +  V  P+++ SL+   V Q + G Y T V++  G
Sbjct: 210 ISDDGKVYACGKESFGEAEYGGQG-TKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 268

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           +++ F      +LGH T    +EP  + 
Sbjct: 269 KVYTFSWGNDGRLGHQTEAADVEPRPLL 296


>gi|356525411|ref|XP_003531318.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           1 [Glycine max]
          Length = 539

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 163/497 (32%), Positives = 240/497 (48%), Gaps = 38/497 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 51  FPLSANPS-IVLHVLTTCNLYPQDLAKLEATCSFFKQPANFAPDFDLSLSELAALDMCQK 109

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M+   +  L  RC G+WK VLRFL + E      E S     Q+  G  H++ +
Sbjct: 110 RAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKS-----QVIAGPGHSIAV 164

Query: 128 -SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQV 185
            S   V+S GS+  G LGHG  TT+ V   R I       ++Q +A       +  SGQ 
Sbjct: 165 TSKGVVYSFGSNSSGQLGHG--TTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQA 222

Query: 186 FTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           +  G  S    G  +T     ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T
Sbjct: 223 YVFGKESF---GEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYT 279

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSG 297
                 G+L H    +   P+ +    E   VVQIAAG  Y+L  A   +G+ VYS G G
Sbjct: 280 FSWGCVGKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCG 339

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LGHG + +E  PR I+ F+   +  + ++AG  H   +   G V TWG G  G LG
Sbjct: 340 LGGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLG 399

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG-FPD---- 412
           HG+E  + +P+ +  L++  AV V      TFV+ D+G VY FG+   GSLG  P+    
Sbjct: 400 HGNEECELVPKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQ 459

Query: 413 RGVSDKVLRPRILDSLRA--HHVSQISTGLY-----HTVVVTDRGRLFGFGDNERAQLG- 464
             + + VL P+++  ++     V QIS   +     HT  +T+ G+L+ FG  ++ QLG 
Sbjct: 460 EDMHENVLTPKLVTWMKQINERVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLGV 519

Query: 465 ----HDTLRGCLEPTEI 477
               H T +G  E  +I
Sbjct: 520 ELGAHQTEKGKPERVDI 536


>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 535

 Score =  197 bits (501), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 160/477 (33%), Positives = 229/477 (48%), Gaps = 31/477 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 49  FPLSASPS-IVLHVLTSCNLDPQDLAKLEATCSFFRQPANFAPDFALSLAELAAFDMCMK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M+   + +L  RC G+WK VLR+L + E            + Q   G  H++ +
Sbjct: 108 RAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGE------ACCRREKSQAIAGPGHSIAV 161

Query: 128 -SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
            S   V+S GS+  G LGHG  T +      I       ++Q +A       +  SGQV+
Sbjct: 162 TSKGDVYSFGSNSSGQLGHG-TTEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDSGQVY 220

Query: 187 TCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
             G +S     +    ++ +  PRLVE+LK +   Q   G  FT  L+  G V+T    +
Sbjct: 221 AFGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGS 280

Query: 246 HGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFC 301
            G+LGH  D+ D      +  LE++  VVQIAAG  Y+L  A   +G+ VYS G G    
Sbjct: 281 DGKLGHHTDSNDMEPHPLLGALEDI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGK 339

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGHG + DE  PR I+ F+   +  + +SAG  H   +   G V TWG G  G LGHG+E
Sbjct: 340 LGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNE 399

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD---- 417
             +  P+ + +L +  AV V      TFV+ + G VY FG     SLG     V D    
Sbjct: 400 ECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASLGH--NAVIDAEGN 457

Query: 418 ---KVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG 464
               VL P ++ SL+     V QIS    +Y   HT  +T+ G+L+ FG  ++ QLG
Sbjct: 458 RHANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG 514



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 149/309 (48%), Gaps = 15/309 (4%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           Q  A   H+  V   G V++ G NSS   GH  T    +RP+ +  L+G+   Q  AG  
Sbjct: 150 QAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEE-WRPKPIRTLQGIRIIQAAAGAG 208

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            T  +T  G V+  G ++ G+  +G    +    P+ +  L+ +  VVQ A G  +   +
Sbjct: 209 RTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNI-FVVQAAIGNFFTAVL 267

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---DSS 342
           +  G VY+F  GS+  LGH    ++++P  +     + I VV+++AG  +++ L    S 
Sbjct: 268 SREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLG-ALEDIPVVQIAAGYCYLLCLACQPSG 326

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---VCARKRKTFVLVDTGSVYG 399
             VY+ G G  G LGHG   D+  P  +   ++ L +Q   + A      V+   G V  
Sbjct: 327 MSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQT-LNLQPMVISAGAWHAAVVGRDGRVCT 385

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +GW  +G LG    G  +    P+++D+L       ++TG Y T VV + G ++ FG  E
Sbjct: 386 WGWGRYGCLG---HGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGE 442

Query: 460 RAQLGHDTL 468
            A LGH+ +
Sbjct: 443 SASLGHNAV 451



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%)

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           AG  H +A+ S G VY++G    G LGHG   ++  P+P+ +L+    +Q  A   +T +
Sbjct: 153 AGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTML 212

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           + D+G VY FG   FG   +  +G S  V+ PR+++SL+   V Q + G + T V++  G
Sbjct: 213 ITDSGQVYAFGKDSFGEAEYGGQG-SKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREG 271

Query: 451 RLFGFGDNERAQLGHDTLRGCLEP 474
           R++ F      +LGH T    +EP
Sbjct: 272 RVYTFSWGSDGKLGHHTDSNDMEP 295


>gi|356525413|ref|XP_003531319.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
           2 [Glycine max]
          Length = 535

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 161/497 (32%), Positives = 241/497 (48%), Gaps = 42/497 (8%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE +++         P    SL +LAA  +C  
Sbjct: 51  FPLSANPS-IVLHVLTTCNLYPQDLAKLEASAQ----PANFAPDFDLSLSELAALDMCQK 105

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M+   +  L  RC G+WK VLRFL + E      E S     Q+  G  H++ +
Sbjct: 106 RAIFKPMTTEQRQHLKQRCGGSWKLVLRFLLAGEACCRRREKS-----QVIAGPGHSIAV 160

Query: 128 -SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQV 185
            S   V+S GS+  G LGHG  TT+ V   R I       ++Q +A       +  SGQ 
Sbjct: 161 TSKGVVYSFGSNSSGQLGHG--TTEDVWQPRPIRALQGIRIIQATAMTGRTMLISDSGQA 218

Query: 186 FTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           +  G  S    G  +T     ++ +  P+LVE+LK +   Q   G  FT  L+  G V+T
Sbjct: 219 YVFGKES---FGEVETIVNRGSKIVTTPQLVESLKNIFVVQAAMGNYFTAVLSREGRVYT 275

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSG 297
                 G+L H    +   P+ +    E   VVQIAAG  Y+L  A   +G+ VYS G G
Sbjct: 276 FSWGCVGKLCHQTDQNDVEPRPLLGALEHIPVVQIAAGFCYLLCLACQPSGMSVYSVGCG 335

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LGHG + +E  PR I+ F+   +  + ++AG  H   +   G V TWG G  G LG
Sbjct: 336 LGGKLGHGTKTNEEYPRLIEQFQLLNLQPMAIAAGSWHAAVVGQDGRVCTWGWGSYGCLG 395

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG-FPD---- 412
           HG+E  + +P+ +  L++  AV V      TFV+ D+G VY FG+   GSLG  P+    
Sbjct: 396 HGNEECELVPKVVEELRNVKAVHVATGDFTTFVVSDSGDVYSFGYGESGSLGHVPENHEQ 455

Query: 413 RGVSDKVLRPRILDSLRA--HHVSQISTGLY-----HTVVVTDRGRLFGFGDNERAQLG- 464
             + + VL P+++  ++     V QIS   +     HT  +T+ G+L+ FG  ++ QLG 
Sbjct: 456 EDMHENVLTPKLVTWMKQINERVVQISLTNFIYWNAHTFALTESGKLYAFGAGDKGQLGV 515

Query: 465 ----HDTLRGCLEPTEI 477
               H T +G  E  +I
Sbjct: 516 ELGAHQTEKGKPERVDI 532


>gi|356567464|ref|XP_003551939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 535

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 163/494 (32%), Positives = 235/494 (47%), Gaps = 33/494 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSANPS-IVLHVLTACNLEPQDLAKLEATCSFFRQPANFAPDLDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M+   + +L  RC G+WK  LR+L + E            + Q   G  H++ +
Sbjct: 107 RAIFKPMTTEQRQDLKLRCGGSWKLALRYLMAGE------ACCRREKSQAIAGPGHSIAV 160

Query: 128 -SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
            S   V+S GS+  G LGHG  T +      I       ++Q +A       V  SGQV+
Sbjct: 161 TSKGVVYSFGSNSSGQLGHG-TTDEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQVY 219

Query: 187 TCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
             G +S     +    ++ +  P++VE+LK +   Q   G  FT  L+  G V+T    +
Sbjct: 220 AFGKDSFGEAEYGVQGSKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGS 279

Query: 246 HGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFC 301
            G+LGH  D  D      +  LE +  VVQIAAG  Y+L  A   +G+ VYS G G    
Sbjct: 280 DGKLGHHTDQSDVEPHPLLGALENI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGK 338

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGHG + DE  PR I+ F    +  + V+AG  H   +   G V TWG G  G LGHG+E
Sbjct: 339 LGHGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNE 398

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK--- 418
             +++P+ + +L +  AV V      TFV+ D G VY FG     SLG    G  ++   
Sbjct: 399 ECESVPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNAAGNDEQGNR 458

Query: 419 ---VLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG---- 464
              VL P ++ SL+     V QIS    +Y   HT  +T+ G+L+ FG  ++ QLG    
Sbjct: 459 HANVLSPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELV 518

Query: 465 -HDTLRGCLEPTEI 477
            + T RG  E  EI
Sbjct: 519 ANQTERGNPERVEI 532


>gi|356540207|ref|XP_003538581.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 530

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 164/494 (33%), Positives = 235/494 (47%), Gaps = 38/494 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    SL +LAA  +C  
Sbjct: 48  FPLSANPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDSDLSLSELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M+   + +L  RC G+WK VLR+L + E            + Q   G  H++ +
Sbjct: 107 RAIFKPMTTEQRQDLKLRCGGSWKLVLRYLMAGE------ACCRREKSQAIAGPGHSIAV 160

Query: 128 SNSS-VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQV 185
           ++   V+S GS+  G LGHG  TT+     R I       ++Q +A       V  SGQV
Sbjct: 161 TSKGIVYSFGSNSSGQLGHG--TTEEEWRPRPIRTLQGIRIIQAAAGAGRTMLVSDSGQV 218

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           +  G+      G    ++ +  P++VE+LK +   Q   G  FT  L+  G V+T    +
Sbjct: 219 YAFGEAEYGVQG----SKTVAAPQIVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGS 274

Query: 246 HGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSGSNFC 301
             +LGH  D  D      +  LE +  VVQIAAG  Y+L  A   +G+ VYS G G    
Sbjct: 275 DEKLGHHTDQSDVEPHPLLGALENI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGK 333

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGHG + DE  PR I+ F    +  + V+AG  H   +   G V TWG G  G LGHG+E
Sbjct: 334 LGHGSRTDEEYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNE 393

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD---- 417
             +++P+ + +L +  AV V      TFV+ D G VY FG     SLG    G  +    
Sbjct: 394 ECESVPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGQSASLGHNAAGNDEQGNR 453

Query: 418 --KVLRPRILDSLRA--HHVSQIST-----GLYHTVVVTDRGRLFGFGDNERAQLG---- 464
             KVL P ++ SL+     V QIS         HT  +T+ G+L+ FG  ++ QLG    
Sbjct: 454 HAKVLDPELVTSLKQINERVVQISLTNCNYWNAHTFALTESGKLYAFGAGDKGQLGIELV 513

Query: 465 -HDTLRGCLEPTEI 477
            + T RG  E  EI
Sbjct: 514 ANQTERGNPERVEI 527


>gi|449435009|ref|XP_004135288.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
 gi|449494867|ref|XP_004159669.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 534

 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 160/492 (32%), Positives = 234/492 (47%), Gaps = 30/492 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    S+ +LAA  +C  
Sbjct: 48  FPLAANPS-IVLHVLTACNLDPQDLAKLEATCSFFRQPANFAPDYELSISELAALDMCRK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M+      +  RC G+WK VLRFL + E      ++     M I    +   + 
Sbjct: 107 RAIFKPMTPEQHEAMKQRCGGSWKLVLRFLVAGESCCRREKS-----MAIAGPGHSIAVT 161

Query: 128 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 186
           S  +V+S GS+  G LGHG  TT+  S  R I       ++Q +A       +  +G V+
Sbjct: 162 SKGAVYSFGSNSSGQLGHG--TTEEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVY 219

Query: 187 TCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
             G +S     +     + +  P+LVE+LK +   Q   G  FT  L+  G V+T    T
Sbjct: 220 AFGKDSFGEAEYGAQGAQVVTTPKLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGT 279

Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFGSGSNFCL 302
             +LGH    +   P+ +    E   VVQIAAG  Y+LA+        VYS G G    L
Sbjct: 280 DSRLGHHTEPNDLEPRPLKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKL 339

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           GHG + DE  PR I+ F+   +  V V+AG  H   +   G V TWG G  G LGHG+E 
Sbjct: 340 GHGSRTDEKHPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNED 399

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPDRGVSDK 418
            ++ P+ + +L +  AV V      TFV+ D G VY FG     SLG     P+   + +
Sbjct: 400 CESSPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNVVLPEEEGNRQ 459

Query: 419 --VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG----H 465
             VL+P ++ SL+  +  V QIS    +Y   HT  +T+ G+L+ FG  ++ QLG    +
Sbjct: 460 PHVLKPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELAN 519

Query: 466 DTLRGCLEPTEI 477
            T RG  E  +I
Sbjct: 520 QTERGNPELVDI 531


>gi|326526993|dbj|BAK00885.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 534

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 159/500 (31%), Positives = 235/500 (47%), Gaps = 47/500 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  L   DLAHLE T K F       P     + +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNLYPEDLAHLEATCKFFRKPANFPPDFLLPMSELAALDMCQK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  MS   +     RC G+WK VLRF+ + E            + Q   G  H++ +
Sbjct: 108 RAIFKPMSTQEREMFKQRCGGSWKLVLRFIMAGE------ACCRREKSQAIAGPGHSIAV 161

Query: 128 SNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           S S + ++ GS+  G LGH        P   + +   RI        +Q +A       V
Sbjct: 162 STSGAAYTFGSNNSGQLGHASLEEEWRPRPVRSLQGIRI--------IQAAAGAGRTMLV 213

Query: 180 LQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             +G+V+  G +S      G++ + R +  P++VE+LK +   Q   G  FT  L+  G 
Sbjct: 214 SDAGRVYAFGKDSFGEVEFGNQGS-RAVATPQMVESLKDIYIVQAAIGNFFTAVLSREGC 272

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVT---GNGVVYS 293
           V+T    +  +LGH    +   P  +  PLE +  VVQIAAG  Y+LA+        VYS
Sbjct: 273 VYTFSWGSDMKLGHQTEPNDVQPHLLTGPLENI-PVVQIAAGYCYLLALACQPSGMSVYS 331

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            G G    LGHG + DE  PR I+ F+   I  + V+AG  H   +   G V TWG G  
Sbjct: 332 VGCGLGGKLGHGTRTDEKYPRLIEQFQTLNIQPIVVAAGAWHAAVVGKDGRVCTWGWGRY 391

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---- 409
           G LGHG+E  +++P+ + +L S  AV V      TF++   G VY FG     SLG    
Sbjct: 392 GCLGHGNEECESVPKVVEALSSVKAVYVATGDYTTFIVSCKGDVYSFGCGESSSLGHNTT 451

Query: 410 FPDRGVSDKVLRPRILDSLRAHH--VSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQ 462
                    VL P ++ SL++ +  V Q+S    +Y   HT  +T+ G+L+ FG  ++ Q
Sbjct: 452 IEGNNRHSNVLSPELVTSLQSKNEKVVQVSLTNSVYWNAHTFALTESGKLYAFGAGDKGQ 511

Query: 463 LG-----HDTLRGCLEPTEI 477
           LG      ++ RG  E  EI
Sbjct: 512 LGSELVSQESERGTPERVEI 531


>gi|357160277|ref|XP_003578713.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 534

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 159/499 (31%), Positives = 233/499 (46%), Gaps = 45/499 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LTS  +   DLAHLE T K F       P     + +LAA  +C  
Sbjct: 49  FPLAANPS-IVLHVLTSCNVEPEDLAHLEATCKFFRKPANFPPDFQLPMSELAALDMCHK 107

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M+   +     RC G+WK VLRF+ + E            + Q   G  H++ +
Sbjct: 108 RAIFKHMTTQEREMFKQRCGGSWKLVLRFIMAGE------ACCRREKSQAIAGPGHSIAV 161

Query: 128 SNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           + S +V++ GS+  G LGH        P   + +   RI        +Q +A       V
Sbjct: 162 TTSGAVYTFGSNNSGQLGHDGLEEEWRPRPIRSLQGIRI--------IQAAAGAGRTMLV 213

Query: 180 LQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
             +G+V+  G +S     +    +R +  P++VE+LK +   Q   G  FT  L+  G V
Sbjct: 214 SDAGRVYAFGKDSFGEVEYGVQGSRVVTTPQMVESLKDIYIVQAAIGNFFTAVLSREGCV 273

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVT---GNGVVYSF 294
           +T    +  +LGH    +   P  +  PLE +  VVQIAAG  Y+LA+        VYS 
Sbjct: 274 YTFSWGSDMKLGHQTEPNDVQPHLLTGPLENI-PVVQIAAGYCYLLALACQPSGMSVYSV 332

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   G V TWG G  G
Sbjct: 333 GCGLGGKLGHGSRTDEKYPRLIEQFQTLNIQPVVVAAGAWHAAVVSKDGRVCTWGWGRYG 392

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----F 410
            LGHG+E  +++P+ + +L S  AV V      TFV+ D G VY FG     SLG     
Sbjct: 393 CLGHGNEECESVPKVVEALGSVKAVHVATGDYTTFVVSDKGDVYSFGCGESSSLGHNTII 452

Query: 411 PDRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQL 463
                   VL P ++ SL+     V Q+S    +Y   HT  +T+ G+L+ FG  ++ QL
Sbjct: 453 EGNNRHSNVLSPELVTSLKRTNERVVQVSLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 512

Query: 464 GHDTL-----RGCLEPTEI 477
           G + +     RG  E  EI
Sbjct: 513 GTELVAQQNERGAPERVEI 531


>gi|224135099|ref|XP_002321983.1| predicted protein [Populus trichocarpa]
 gi|222868979|gb|EEF06110.1| predicted protein [Populus trichocarpa]
          Length = 538

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 160/497 (32%), Positives = 231/497 (46%), Gaps = 36/497 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKT----FGGSHGLYPQKFRSLVDLAASQ 63
           F +   PS ++  +LT+  L   DLA LE  S      F       P    S+ +LAA  
Sbjct: 48  FPLAANPS-IVLHVLTTCNLDPQDLAKLEAKSIATCSFFRQPASFAPDYELSMSELAALD 106

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYH 123
           +C   +I+  M+   + +L  RC G+WK VLRFL + E            + Q   G  H
Sbjct: 107 MCQKRAIFKPMTPEERQDLKQRCGGSWKLVLRFLLAGE------ACCRRERSQAIAGPGH 160

Query: 124 TLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 182
           ++ + SN   +S GS+  G LGHG  T +     +I       ++Q +A       +  +
Sbjct: 161 SIAVTSNGVAYSFGSNSSGQLGHG-TTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDA 219

Query: 183 GQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           G+V+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T
Sbjct: 220 GEVYAFGKDSFGEAEYGVQGT-KTVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYT 278

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFGSG 297
                 G+LGH    +   P  +    E   VVQIAAG  Y+LA+        VYS G G
Sbjct: 279 FSWGNDGKLGHQTEPNDVVPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCG 338

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG G  G LG
Sbjct: 339 LGGKLGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLG 398

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           HG+E  +++P+ + +L    AV V      TFV+ D G VY FG     SLG    G   
Sbjct: 399 HGNEECESVPKVVDALSKVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNGDGDGQ 458

Query: 418 -----KVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG- 464
                 VL P ++ SL+     V QIS    +Y   HT  +T+ G+LF FG  ++ QLG 
Sbjct: 459 GNRHTNVLSPELVTSLKEVKERVVQISLTNSVYWNAHTFALTESGKLFAFGAGDKGQLGM 518

Query: 465 ----HDTLRGCLEPTEI 477
               + T RG  E  ++
Sbjct: 519 ELVNNQTERGNPEQVDV 535


>gi|225424560|ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
           [Vitis vinifera]
 gi|296081404|emb|CBI16837.3| unnamed protein product [Vitis vinifera]
          Length = 534

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 162/494 (32%), Positives = 237/494 (47%), Gaps = 34/494 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE T   F       P    S+ +LAA  +C  
Sbjct: 48  FPLAANPS-IVLHVLTACNLEPQDLAKLEATCSFFRQPAHFAPDFELSISELAALDMCLK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M    +  L  RC G+WK VLRFL + E            + Q   G  H++ +
Sbjct: 107 RAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGE------ACCRREKSQAIAGPGHSIAV 160

Query: 128 S-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
           +   +V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQV+
Sbjct: 161 TVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQVY 219

Query: 187 TCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
             G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T    
Sbjct: 220 AFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGSNFC 301
              +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+ VYS G G    
Sbjct: 279 NDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGK 338

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGHG + DE  PR I+ FR   +  + V+AG  H   +   G V TWG G  G LGHG+E
Sbjct: 339 LGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNE 398

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF---PDRGVSDK 418
             +++P+ + +L +  AV V      TFV+ D G VY FG     SLG    PD G  ++
Sbjct: 399 ECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPD-GQGNR 457

Query: 419 ---VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG---- 464
              +L P ++ SL+     + QIS    +Y   HT  +T+ G+L+ FG  ++ QLG    
Sbjct: 458 HANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLGVELV 517

Query: 465 -HDTLRGCLEPTEI 477
            + T RG  E  +I
Sbjct: 518 ANQTERGNPERVDI 531


>gi|255547958|ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
 gi|223546087|gb|EEF47590.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
          Length = 537

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 159/496 (32%), Positives = 234/496 (47%), Gaps = 36/496 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT+  L   DLA LE ++     ++   P    S+ +LAA  +C  
Sbjct: 49  FPLAASPS-IVLHVLTTCNLDPQDLAKLEASALLLQPAN-FAPDYELSISELAALDMCQK 106

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M+   + +L  RC G+WK VLRFL + E              Q   G  H++ +
Sbjct: 107 RAIFKPMTSEERRDLKQRCGGSWKLVLRFLLAGE------ACCRRENSQAIAGPGHSIAV 160

Query: 128 -SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
            S   V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQV+
Sbjct: 161 TSKGVVYSFGSNSSGQLGHG-NTEEEWRPRQIRSLQGIRIIQAAAGPGRTMLISDAGQVY 219

Query: 187 TCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
             G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T    
Sbjct: 220 AFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWG 278

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---GNGVVYSFGSGSNFC 301
           + G+LGH        P  +    E   VVQIAAG  Y+LA+        VYS G G    
Sbjct: 279 SDGKLGHQTEPTDVEPHPLLGALENIPVVQIAAGYCYLLALACQPSGMSVYSVGCGLGGK 338

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG G  G LGHG+E
Sbjct: 339 LGHGSRTDEKYPRLIEQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNE 398

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--------FPDR 413
             +++P+ + +L +  AV V      TFV+ + G VY FG     SLG           +
Sbjct: 399 ECESVPKVVDALSNIKAVHVATGDYTTFVVSEEGDVYSFGCGESASLGHNAAAAANADGQ 458

Query: 414 GVSDKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG-- 464
           G    VL P ++ SL+     V QIS    +Y   HT  +TD G+L+ FG  ++ QLG  
Sbjct: 459 GRHANVLSPELVTSLKEVNERVVQISLTNSIYWNAHTFALTDSGKLYAFGAGDKGQLGTE 518

Query: 465 ---HDTLRGCLEPTEI 477
              + T RG  E  +I
Sbjct: 519 LVNNQTERGNPERVDI 534


>gi|302812094|ref|XP_002987735.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
 gi|300144627|gb|EFJ11310.1| hypothetical protein SELMODRAFT_426505 [Selaginella moellendorffii]
          Length = 539

 Score =  184 bits (468), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 159/489 (32%), Positives = 230/489 (47%), Gaps = 46/489 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT   L   DLA LE T   F  +    P    SL +LAA  +C  
Sbjct: 52  FPLATNPS-IVLHVLTECCLDPQDLARLEATCSFFRHAANFTPDVTLSLSELAALDMCKR 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M+   +  L   C G+WK VLRFL++ E            ++Q   G  H++++
Sbjct: 111 RAIFRPMTSEERESLKESCGGSWKLVLRFLKAGELCYRR------EKIQAIAGPGHSIVV 164

Query: 128 SNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           + + +V++ GSS  G LGHG       P   + +   RI        +Q +A       +
Sbjct: 165 TKTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI--------IQATAGVGRTMLI 216

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
             +G+V+  G +S    G  +   P    I  P++VE+L G+   Q   G  FT  L+  
Sbjct: 217 SDTGRVYAFGKDS---FGDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSRE 273

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG---VVY 292
           G V+T       +LGH    +   P+ +    E   VVQIAAG  Y+LA+T       VY
Sbjct: 274 GRVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVY 333

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           S G G    LGHG + DE  P+ I+ F+   +  + V+AG  H   +   G V TWG G 
Sbjct: 334 SVGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVCTWGWGR 393

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-- 410
            G LGHG+E  + LP+ + SL+   AV V      TFV+ D G V+  G     SLG   
Sbjct: 394 YGCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFSCGCGESSSLGHLS 453

Query: 411 -PDRGVSDK---VLRPRILDSL--RAHHVSQIS-----TGLYHTVVVTDRGRLFGFGDNE 459
               G +++   VLRP ++ SL  R   V QIS     T   HT  + D GRLF FG  +
Sbjct: 454 GATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFALCDSGRLFAFGAGD 513

Query: 460 RAQLGHDTL 468
           + QLG + L
Sbjct: 514 KGQLGTELL 522


>gi|302811669|ref|XP_002987523.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
 gi|300144677|gb|EFJ11359.1| hypothetical protein SELMODRAFT_126315 [Selaginella moellendorffii]
          Length = 508

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 159/489 (32%), Positives = 230/489 (47%), Gaps = 46/489 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +LT   L   DLA LE T   F  +    P    SL +LAA  +C  
Sbjct: 21  FPLATNPS-IVLHVLTECCLDPQDLARLEATCSFFRHAANFTPDVTLSLSELAALDMCKR 79

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +I+  M+   +  L   C G+WK VLRFL++ E            ++Q   G  H++++
Sbjct: 80  RAIFRPMTSEERESLKESCGGSWKLVLRFLKAGELCYRR------EKIQAIAGPGHSIVV 133

Query: 128 SNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           + + +V++ GSS  G LGHG       P   + +   RI        +Q +A       +
Sbjct: 134 TKTGAVYTFGSSSSGQLGHGSLDEEWRPRLLRSLQGVRI--------IQATAGVGRTMLI 185

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
             +G+V+  G +S    G  +   P    I  P++VE+L G+   Q   G  FT  L+  
Sbjct: 186 SDTGRVYAFGKDSF---GDPEYGGPGSKNINTPQIVESLNGIFVVQAAIGNFFTAVLSRE 242

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG---VVY 292
           G V+T       +LGH    +   P+ +    E   VVQIAAG  Y+LA+T       VY
Sbjct: 243 GRVYTFSWGADAKLGHQTEPEDQKPQLLRGALENKPVVQIAAGYCYLLALTCQSTGMAVY 302

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           S G G    LGHG + DE  P+ I+ F+   +  + V+AG  H   +   G V TWG G 
Sbjct: 303 SVGCGLGGKLGHGTRSDERWPKMIEHFQHLRLQPIAVAAGAWHAAVVSEDGRVCTWGWGR 362

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-- 410
            G LGHG+E  + LP+ + SL+   AV V      TFV+ D G V+  G     SLG   
Sbjct: 363 YGCLGHGNEDCELLPKVVESLQGVKAVHVATGDYTTFVVTDAGEVFSCGCGESSSLGHLS 422

Query: 411 -PDRGVSDK---VLRPRILDSL--RAHHVSQIS-----TGLYHTVVVTDRGRLFGFGDNE 459
               G +++   VLRP ++ SL  R   V QIS     T   HT  + D GRLF FG  +
Sbjct: 423 GATEGQANRHANVLRPELVSSLKQRNEKVLQISLTNSVTWNAHTFALCDSGRLFAFGAGD 482

Query: 460 RAQLGHDTL 468
           + QLG + L
Sbjct: 483 KGQLGTELL 491


>gi|77554672|gb|ABA97468.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|77554673|gb|ABA97469.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862485|gb|ABG21962.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
 gi|108862486|gb|ABG21963.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 439

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 150/455 (32%), Positives = 216/455 (47%), Gaps = 49/455 (10%)

Query: 56  LVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQM 115
           + +LAA  +C   +I+  M++  +     RC G+WK VLRF+ + E            + 
Sbjct: 1   MSELAALDMCQKRAIFKPMTQQEREMFKQRCGGSWKLVLRFIMAGE------ACCRREKS 54

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
           Q   G  H++ ++ S +V++ GS+  G LGHG       P   + +   RI        +
Sbjct: 55  QAIAGPGHSIAVTTSGAVYTFGSNSSGQLGHGSLEEEWRPRIIRSLQGIRI--------I 106

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGL 226
           Q +A       V  +G+V+  G +S     +    +R +  P+LVE+LK +   Q   G 
Sbjct: 107 QAAAGAGRTMLVSDAGRVYAFGKDSFGEVEYAAQGSRVVTTPQLVESLKDIYIVQAAIGN 166

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAV 285
            FT  L+  GHV+T       +LGH    +   P  +A PLE +  VVQIAAG  Y+LA+
Sbjct: 167 FFTAVLSREGHVYTFSWGNDMKLGHQTEPNDVQPHLLAGPLENI-PVVQIAAGYCYLLAL 225

Query: 286 T---GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
                   VYS G G    LGHG + DE  PR I+ F+   I  V V+AG  H   +   
Sbjct: 226 ACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLIEQFQALNIQPVVVAAGAWHAAVVGKD 285

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V TWG G  G LGHG+E  +++P+ + SL +  AV V      TFV+ D G VY FG 
Sbjct: 286 GRVCTWGWGRYGCLGHGNEECESVPKVVESLVNVRAVHVATGDYTTFVVSDKGDVYSFGC 345

Query: 403 MGFGSLGF----PDRGVSDKVLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGR 451
               SLG             VL P ++ SL+     V+QIS    +Y   HT  +TD G+
Sbjct: 346 GESSSLGHNTITEGNNRHTNVLSPELVTSLKRTNERVAQISLTNSIYWNAHTFALTDSGK 405

Query: 452 LFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 486
           L+ FG  ++ QLG          TE+  QE E  T
Sbjct: 406 LYAFGAGDKGQLG----------TELVAQESERGT 430


>gi|242065672|ref|XP_002454125.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
 gi|241933956|gb|EES07101.1| hypothetical protein SORBIDRAFT_04g024990 [Sorghum bicolor]
          Length = 535

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 156/487 (32%), Positives = 224/487 (45%), Gaps = 42/487 (8%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA+LE T   F       P    SL +LAA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSACDLDPKDLANLEATCTFFSKPANFAPNFALSLPELAAFDMCQK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +++  M +  Q  L  RC G+WK VL+++   E           N  ++  G  H+++I
Sbjct: 111 RTMFKLMKQEDQECLKQRCGGSWKHVLKYILVREK----------NGSRVIAGPGHSIVI 160

Query: 128 S-NSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSG 183
           S N  V+S G++  G LG G    +   C+    I       + Q +        V  +G
Sbjct: 161 SSNGDVYSFGANCSGQLGLGDSEDRFRPCI----IRSLQGIRITQAAVGSRWTMLVSDTG 216

Query: 184 QVFTCG-DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
            V+  G DN        D +  I  P++VE+LKGV   Q   G  F+  L+  G V+T  
Sbjct: 217 SVYAFGKDNFRGAEVVDDAHIQITTPKIVESLKGVFVVQAAIGGYFSAVLSREGRVYTFS 276

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSN 299
                +LGH        P+ ++ LE+V  V  I+AG  Y  MLA   NG+ VYS G G  
Sbjct: 277 WGKEERLGHSSDPSDVEPRLLSGLEDV-PVAYISAGNCYLLMLAYQPNGMSVYSVGCGLG 335

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LGHG + ++  P+ I+ F+      V ++AG  H  AL + G V TWG G+ G LGHG
Sbjct: 336 GKLGHGCKTNKGMPKLIEQFQSLSFKPVSIAAGTWHAAALGADGRVCTWGWGHTGCLGHG 395

Query: 360 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK- 418
           DE  K +P  +  L+   AV +   +  TFV+ + G VY FG     SL F +   +++ 
Sbjct: 396 DEEYKAVPTLVEGLRDVKAVHLSTGEYTTFVVAENGDVYSFG--SGESLVFQEDDEAEEG 453

Query: 419 --VLRPRILDSLRA--HHVSQIS-----------TGLYHTVVVTDRGRLFGFGDNERAQL 463
                P I+ SL+A    V QIS            G  HT  V D G L  FG   R QL
Sbjct: 454 PDFSTPSIVSSLKALNKKVVQISPTNASYWLNSEMGHPHTFAVMDSGDLCAFGGGIRGQL 513

Query: 464 GHDTLRG 470
           G   L G
Sbjct: 514 GVKLLEG 520



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 260 PKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           PK +A LE   +     A   P++ L++            + F L   E  + L+ R   
Sbjct: 72  PKDLANLEATCTFFSKPANFAPNFALSLPELAAFDMCQKRTMFKLMKQEDQECLKQRCGG 131

Query: 318 TFRRKGIHVV-------RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
           +++    +++       RV AG  H + + S+G VY++G    G LG GD  D+  P  +
Sbjct: 132 SWKHVLKYILVREKNGSRVIAGPGHSIVISSNGDVYSFGANCSGQLGLGDSEDRFRPCII 191

Query: 371 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRPRILDSLR 429
            SL+     Q     R T ++ DTGSVY FG   F G+    D  +  ++  P+I++SL+
Sbjct: 192 RSLQGIRITQAAVGSRWTMLVSDTGSVYAFGKDNFRGAEVVDDAHI--QITTPKIVESLK 249

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
              V Q + G Y + V++  GR++ F   +  +LGH +    +EP
Sbjct: 250 GVFVVQAAIGGYFSAVLSREGRVYTFSWGKEERLGHSSDPSDVEP 294


>gi|147784312|emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 156/478 (32%), Positives = 230/478 (48%), Gaps = 31/478 (6%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLEL--TSKTFGGSHGLYPQKFRSLVDLAASQLC 65
           F +   PS ++  +LT+  L   DLA LE   T   F       P    S+ +LAA  +C
Sbjct: 48  FPLAANPS-IVLHVLTACNLEPQDLAKLEASATCSFFRQPAHFAPDFELSISELAALDMC 106

Query: 66  ALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTL 125
              +I+  M    +  L  RC G+WK VLRFL + E            + Q   G  H++
Sbjct: 107 LKRAIFRPMXLEEREVLKQRCGGSWKLVLRFLLAGE------ACCRREKSQAIAGPGHSI 160

Query: 126 LIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
            ++   +V+S GS+  G LGHG  T +     +I       ++Q +A       +  +GQ
Sbjct: 161 AVTVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGAGRTMLISDAGQ 219

Query: 185 VFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           V+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  L+  G V+T  
Sbjct: 220 VYAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFS 278

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGSGSN 299
                +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG+ VYS G G  
Sbjct: 279 WGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNGMSVYSVGCGLG 338

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LGHG + DE  PR I+ F+   +  + V+AG  H   +   G V TWG G  G LGHG
Sbjct: 339 GKLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHG 398

Query: 360 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF---PDRGVS 416
           +E  +++P+ + +L +  AV V      TFV+ D G VY FG     SLG    PD G  
Sbjct: 399 NEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSLGHNNGPD-GQG 457

Query: 417 DK---VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG 464
           ++   +L P ++ SL+     + QIS    +Y   HT  +T+ G+L+ FG  ++ QLG
Sbjct: 458 NRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAFGAGDKGQLG 515



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 152/307 (49%), Gaps = 13/307 (4%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           Q  A   H+  V   G V++ G NSS   GH  T+   +RPR + +L+G+   Q  AG  
Sbjct: 151 QAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEE-WRPRQIRSLEGIRIIQAAAGAG 209

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            T  ++  G V+  G ++ G+  +G   T    TP+ +  L+ +  VVQ A G  +   +
Sbjct: 210 RTMLISDAGQVYAFGKDSFGEAEYGVQGTKLVTTPQLVESLKNI-FVVQAAIGNFFTAVL 268

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---DSS 342
           +  G VY+F  G++  LGH  + ++L+P  +     + I VV+++AG  +++AL    + 
Sbjct: 269 SREGRVYTFSWGNDAKLGHQTEANDLEPHPL-LGALENIPVVQIAAGYCYLLALACQPNG 327

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK--SHLAVQVCARKRKTFVLVDTGSVYGF 400
             VY+ G G  G LGHG   D+  P  +   +  +   + V A      V+   G V  +
Sbjct: 328 MSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFQILNLQPMVVAAGAWHAAVVGRDGRVCTW 387

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G LG    G  +    P+++++L       ++TG Y T VV+D G ++ FG  E 
Sbjct: 388 GWGRYGCLG---HGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGES 444

Query: 461 AQLGHDT 467
           + LGH+ 
Sbjct: 445 SSLGHNN 451



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 1/144 (0%)

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           AG  H +A+   G VY++G    G LGHG   ++  P  + SL+    +Q  A   +T +
Sbjct: 154 AGPGHSIAVTVKGAVYSFGSNSSGQLGHGTTDEEWRPRQIRSLEGIRIIQAAAGAGRTML 213

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           + D G VY FG   FG   +  +G +  V  P++++SL+   V Q + G + T V++  G
Sbjct: 214 ISDAGQVYAFGKDSFGEAEYGVQG-TKLVTTPQLVESLKNIFVVQAAIGNFFTAVLSREG 272

Query: 451 RLFGFGDNERAQLGHDTLRGCLEP 474
           R++ F     A+LGH T    LEP
Sbjct: 273 RVYTFSWGNDAKLGHQTEANDLEP 296


>gi|18404804|ref|NP_566789.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|14334716|gb|AAK59536.1| unknown protein [Arabidopsis thaliana]
 gi|16323434|gb|AAL15211.1| unknown protein [Arabidopsis thaliana]
 gi|332643597|gb|AEE77118.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 432

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 141/422 (33%), Positives = 202/422 (47%), Gaps = 28/422 (6%)

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYH 123
           +C    I+  M+   + E+  RC G+WK VLRFL + E            + Q   G  H
Sbjct: 1   MCNKRVIFKPMNEEERQEMKRRCGGSWKLVLRFLLAGE------ACCRREKSQAVAGPGH 54

Query: 124 TLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 182
           ++ + S   V++ G +  G LGHG  T        +       ++Q +A       +   
Sbjct: 55  SVAVTSKGEVYTFGYNNSGQLGHG-HTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDD 113

Query: 183 GQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           G+V+ CG  S      G + T +P+  P+LV +LK +   Q   G  FT  L+  G V+T
Sbjct: 114 GKVYACGKESFGEAEYGGQGT-KPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYT 172

Query: 241 CGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVT--GNGV-VYSFGS 296
                 G+LGH        P+ +  PLE V  VVQIAAG  Y+LA+    NG+ VYS G 
Sbjct: 173 FSWGNDGRLGHQTEAADVEPRPLLGPLENV-PVVQIAAGYCYLLALACQPNGMSVYSVGC 231

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           G    LGHG + DE  PR I+ F+   +    V+AG  H   +   G V TWG G  G L
Sbjct: 232 GLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCL 291

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPD 412
           GHG+E  +++P+ +  L    AV V      TFV+ D G VY FG     SLG    F +
Sbjct: 292 GHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDE 351

Query: 413 RGVS-DKVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQLG 464
           +G     VL P ++ SL+     + QIS    +Y   HT  +T+ G+LF FG  ++ QLG
Sbjct: 352 QGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLG 411

Query: 465 HD 466
            +
Sbjct: 412 TE 413



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 1/148 (0%)

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           AG  H VA+ S G VYT+G    G LGHG   D+   +P+ SL+    +Q  A   +T +
Sbjct: 50  AGPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTML 109

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           + D G VY  G   FG   +  +G +  V  P+++ SL+   V Q + G Y T V++  G
Sbjct: 110 ISDDGKVYACGKESFGEAEYGGQG-TKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREG 168

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           +++ F      +LGH T    +EP  + 
Sbjct: 169 KVYTFSWGNDGRLGHQTEAADVEPRPLL 196


>gi|222623170|gb|EEE57302.1| hypothetical protein OsJ_07379 [Oryza sativa Japonica Group]
          Length = 609

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 218/478 (45%), Gaps = 34/478 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 124 FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 182

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
             +   M++  + +L  RC G+WK V +++ + E           N  +I  G  H++++
Sbjct: 183 RPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARER----------NYSRIVAGPGHSIVV 232

Query: 128 SNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
           +     +S G++  G LG G +T        I    +  + Q +        V  +G V+
Sbjct: 233 TTKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVY 291

Query: 187 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
             G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T      
Sbjct: 292 AFGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRT 351

Query: 247 GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCL 302
            +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    L
Sbjct: 352 ERLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKL 410

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           GHG ++++  P+ I+ F     + V V+AG  H  AL   G V TWG G+ G LGHGDE 
Sbjct: 411 GHGCKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEE 470

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR- 421
            + LP  +  L +  AV V   +  TFV+ D G  Y FG     ++GF +   +      
Sbjct: 471 YRVLPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADF 530

Query: 422 --PRILDSLRA--HHVSQIST-----------GLYHTVVVTDRGRLFGFGDNERAQLG 464
             P +++SL+       QIST           G  HT  + + G+L+ FG   + QLG
Sbjct: 531 STPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLG 588



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 15/253 (5%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           ++ AG   +  +T +G  ++ G+N  GQLG GDT DR  P  I  L+ +  + Q A G  
Sbjct: 221 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSI-KITQAAVGSR 279

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             + V+  G VY+FG GS       +  D +  P+ +++   KG+ VV+ + G      L
Sbjct: 280 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESL--KGVFVVQAAIGGYFSAFL 337

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DTG- 395
              G VYT   G    LGH  +     P  LS  L+  L  Q+ A      +L    TG 
Sbjct: 338 SREGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGM 397

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRL 452
           SVY  G    G LG    G  +    P++++   +L  + VS ++ G +H   + D GR+
Sbjct: 398 SVYSVGCGLGGKLG---HGCKNNKGTPKLIEHFLTLSFNPVS-VAAGTWHAAALGDDGRV 453

Query: 453 FGFGDNERAQLGH 465
             +G      LGH
Sbjct: 454 CTWGWGHTGCLGH 466



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 2/147 (1%)

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
           R+ AG  H + + + G  Y++G    G LG GD  D+  P  + SL+S    Q     R+
Sbjct: 221 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQ 280

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T ++ DTGSVY FG   F      D   +D +  P+I++SL+   V Q + G Y +  ++
Sbjct: 281 TMLVSDTGSVYAFGKGSFVWEELSD--AADHITTPKIVESLKGVFVVQAAIGGYFSAFLS 338

Query: 448 DRGRLFGFGDNERAQLGHDTLRGCLEP 474
             G+++        +LGH +    +EP
Sbjct: 339 REGQVYTISWGRTERLGHSSDPSDVEP 365


>gi|115447089|ref|NP_001047324.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|47847831|dbj|BAD21626.1| rjs-like protein [Oryza sativa Japonica Group]
 gi|113536855|dbj|BAF09238.1| Os02g0597000 [Oryza sativa Japonica Group]
 gi|215717087|dbj|BAG95450.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 537

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 218/478 (45%), Gaps = 34/478 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
             +   M++  + +L  RC G+WK V +++ + E           N  +I  G  H++++
Sbjct: 111 RPMVKLMAQQEREQLKQRCGGSWKLVFKYIVARER----------NYSRIVAGPGHSIVV 160

Query: 128 SNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
           +     +S G++  G LG G +T        I    +  + Q +        V  +G V+
Sbjct: 161 TTKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQSIKITQAAVGSRQTMLVSDTGSVY 219

Query: 187 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
             G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T      
Sbjct: 220 AFGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRT 279

Query: 247 GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCL 302
            +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    L
Sbjct: 280 ERLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKL 338

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           GHG ++++  P+ I+ F     + V V+AG  H  AL   G V TWG G+ G LGHGDE 
Sbjct: 339 GHGCKNNKGTPKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEE 398

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR- 421
            + LP  +  L +  AV V   +  TFV+ D G  Y FG     ++GF +   +      
Sbjct: 399 YRVLPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADF 458

Query: 422 --PRILDSLRA--HHVSQIST-----------GLYHTVVVTDRGRLFGFGDNERAQLG 464
             P +++SL+       QIST           G  HT  + + G+L+ FG   + QLG
Sbjct: 459 STPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLG 516



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 116/253 (45%), Gaps = 15/253 (5%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           ++ AG   +  +T +G  ++ G+N  GQLG GDT DR  P  I  L+ +  + Q A G  
Sbjct: 149 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSI-KITQAAVGSR 207

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             + V+  G VY+FG GS       +  D +  P+ +++   KG+ VV+ + G      L
Sbjct: 208 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESL--KGVFVVQAAIGGYFSAFL 265

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DTG- 395
              G VYT   G    LGH  +     P  LS  L+  L  Q+ A      +L    TG 
Sbjct: 266 SREGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGM 325

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRL 452
           SVY  G    G LG    G  +    P++++   +L  + VS ++ G +H   + D GR+
Sbjct: 326 SVYSVGCGLGGKLG---HGCKNNKGTPKLIEHFLTLSFNPVS-VAAGTWHAAALGDDGRV 381

Query: 453 FGFGDNERAQLGH 465
             +G      LGH
Sbjct: 382 CTWGWGHTGCLGH 394



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 2/147 (1%)

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
           R+ AG  H + + + G  Y++G    G LG GD  D+  P  + SL+S    Q     R+
Sbjct: 149 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQSIKITQAAVGSRQ 208

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T ++ DTGSVY FG   F      D   +D +  P+I++SL+   V Q + G Y +  ++
Sbjct: 209 TMLVSDTGSVYAFGKGSFVWEELSD--AADHITTPKIVESLKGVFVVQAAIGGYFSAFLS 266

Query: 448 DRGRLFGFGDNERAQLGHDTLRGCLEP 474
             G+++        +LGH +    +EP
Sbjct: 267 REGQVYTISWGRTERLGHSSDPSDVEP 293


>gi|359473138|ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 2
           [Vitis vinifera]
          Length = 526

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 148/447 (33%), Positives = 218/447 (48%), Gaps = 33/447 (7%)

Query: 55  SLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQ 114
           S+ +LAA  +C   +I+  M    +  L  RC G+WK VLRFL + E            +
Sbjct: 86  SISELAALDMCLKRAIFRPMMLEEREVLKQRCGGSWKLVLRFLLAGE------ACCRREK 139

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            Q   G  H++ ++   +V+S GS+  G LGHG  T +     +I       ++Q +A  
Sbjct: 140 SQAIAGPGHSIAVTVKGAVYSFGSNSSGQLGHG-TTDEEWRPRQIRSLEGIRIIQAAAGA 198

Query: 174 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
                +  +GQV+  G +S      G + T + +  P+LVE+LK +   Q   G  FT  
Sbjct: 199 GRTMLISDAGQVYAFGKDSFGEAEYGVQGT-KLVTTPQLVESLKNIFVVQAAIGNFFTAV 257

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--GNG 289
           L+  G V+T       +LGH    +   P  +    E   VVQIAAG  Y+LA+    NG
Sbjct: 258 LSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGALENIPVVQIAAGYCYLLALACQPNG 317

Query: 290 V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           + VYS G G    LGHG + DE  PR I+ FR   +  + V+AG  H   +   G V TW
Sbjct: 318 MSVYSVGCGLGGKLGHGTRTDEKHPRLIEQFRILNLQPMVVAAGAWHAAVVGRDGRVCTW 377

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G G  G LGHG+E  +++P+ + +L +  AV V      TFV+ D G VY FG     SL
Sbjct: 378 GWGRYGCLGHGNEECESVPKVVEALINVKAVHVATGDYTTFVVSDDGDVYSFGCGESSSL 437

Query: 409 GF---PDRGVSDK---VLRPRILDSLR--AHHVSQIS--TGLY---HTVVVTDRGRLFGF 455
           G    PD G  ++   +L P ++ SL+     + QIS    +Y   HT  +T+ G+L+ F
Sbjct: 438 GHNNGPD-GQGNRHANILSPELVTSLKQIKERMVQISLTNSIYWNAHTFALTETGKLYAF 496

Query: 456 GDNERAQLG-----HDTLRGCLEPTEI 477
           G  ++ QLG     + T RG  E  +I
Sbjct: 497 GAGDKGQLGVELVANQTERGNPERVDI 523


>gi|226501958|ref|NP_001145799.1| uncharacterized protein LOC100279306 [Zea mays]
 gi|194702102|gb|ACF85135.1| unknown [Zea mays]
 gi|194704788|gb|ACF86478.1| unknown [Zea mays]
 gi|195621478|gb|ACG32569.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
 gi|219884475|gb|ACL52612.1| unknown [Zea mays]
 gi|223949899|gb|ACN29033.1| unknown [Zea mays]
 gi|224030775|gb|ACN34463.1| unknown [Zea mays]
 gi|413922916|gb|AFW62848.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922917|gb|AFW62849.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
 gi|413922918|gb|AFW62850.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 3 [Zea mays]
          Length = 535

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 151/479 (31%), Positives = 214/479 (44%), Gaps = 38/479 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L+S  L   DLA+LE T   FG      P    SL +LAA  +C  
Sbjct: 52  FPLAVSPS-IVLHVLSSCDLGPKDLANLEATCVFFGKPASFAPDFALSLPELAAFDMCQK 110

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
            +++  M +  Q  L  RC G+WK VL ++   E           N  ++  G  H+++I
Sbjct: 111 RTMFKQMKQEDQECLKQRCGGSWKHVLGYILVREK----------NGSRVIAGPGHSIII 160

Query: 128 -SNSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSG 183
            SN  V+S G++  G LG G    +   CV    I       + Q +        V  +G
Sbjct: 161 TSNGDVYSFGANCSGQLGLGDSEDRFKPCV----IRSLQGIRITQAAVGSRCTMLVSDTG 216

Query: 184 QVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
            V++ G          D  +  I  PR+ E+LKGV   Q   G  F+  L+  G V+T  
Sbjct: 217 SVYSFGKEDFRVAELVDGAHFQITTPRIEESLKGVFVVQAAIGGYFSAVLSREGRVYTFS 276

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSN 299
                +LGH        P+ +  LE+V  V  I+AG  Y  MLA   NG+ VYS G G  
Sbjct: 277 WGKAERLGHSSDPSDVEPRLLPGLEDV-PVAYISAGNCYLLMLAYQPNGMSVYSVGCGLG 335

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LGHG + +   P+ ++ F+      V ++AG  H VAL + G V TWG G+ G LGHG
Sbjct: 336 GKLGHGCKTNNGMPKLVEQFQSMSFKPVSIAAGTWHAVALGADGRVCTWGWGHTGCLGHG 395

Query: 360 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-K 418
           DE  + +P  +  L+   AV V   +  TFV+ + G VY FG     +    D    +  
Sbjct: 396 DEECRAVPTVVEGLRDVKAVHVSTGEYTTFVVAENGDVYSFGSGESLAFQLDDEAEEEPD 455

Query: 419 VLRPRILDSLR--AHHVSQIS-----------TGLYHTVVVTDRGRLFGFGDNERAQLG 464
              P I+ SL+     V QIS            G  HT  V D G +  FG   R QLG
Sbjct: 456 SSTPSIVSSLKDLNKKVVQISHTNASYWMNSEMGHPHTFAVMDSGDVCAFGGGVRGQLG 514



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 1/147 (0%)

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
           RV AG  H + + S+G VY++G    G LG GD  D+  P  + SL+     Q     R 
Sbjct: 149 RVIAGPGHSIIITSNGDVYSFGANCSGQLGLGDSEDRFKPCVIRSLQGIRITQAAVGSRC 208

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T ++ DTGSVY FG   F      D G   ++  PRI +SL+   V Q + G Y + V++
Sbjct: 209 TMLVSDTGSVYSFGKEDFRVAELVD-GAHFQITTPRIEESLKGVFVVQAAIGGYFSAVLS 267

Query: 448 DRGRLFGFGDNERAQLGHDTLRGCLEP 474
             GR++ F   +  +LGH +    +EP
Sbjct: 268 REGRVYTFSWGKAERLGHSSDPSDVEP 294



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 107/253 (42%), Gaps = 15/253 (5%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           +V AG   +  +T  G V++ G+N  GQLG GD+ DR  P  I  L+ +  + Q A G  
Sbjct: 149 RVIAGPGHSIIITSNGDVYSFGANCSGQLGLGDSEDRFKPCVIRSLQGI-RITQAAVGSR 207

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
             + V+  G VYSFG   +F +     G       PR  ++   KG+ VV+ + G     
Sbjct: 208 CTMLVSDTGSVYSFGK-EDFRVAELVDGAHFQITTPRIEESL--KGVFVVQAAIGGYFSA 264

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV---DT 394
            L   G VYT+  G    LGH  +     P  L  L+      + A      +L    + 
Sbjct: 265 VLSREGRVYTFSWGKAERLGHSSDPSDVEPRLLPGLEDVPVAYISAGNCYLLMLAYQPNG 324

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 452
            SVY  G    G LG    G       P++++  ++     +S   G +H V +   GR+
Sbjct: 325 MSVYSVGCGLGGKLG---HGCKTNNGMPKLVEQFQSMSFKPVSIAAGTWHAVALGADGRV 381

Query: 453 FGFGDNERAQLGH 465
             +G      LGH
Sbjct: 382 CTWGWGHTGCLGH 394


>gi|218191099|gb|EEC73526.1| hypothetical protein OsI_07916 [Oryza sativa Indica Group]
          Length = 634

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 217/478 (45%), Gaps = 34/478 (7%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCAL 67
           F +   PS ++  +L++  L   DLA LE T   F       P    SL ++AA  +C  
Sbjct: 149 FPLAVSPS-IVLHVLSTCELDPKDLAALEATCTFFSKPANFEPNFALSLPEVAAFDMCHK 207

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
             +   M++  + +L  RC G+WK VL+++ + E           N  +I  G  H++++
Sbjct: 208 RPMVKLMAQQEREQLKQRCGGSWKLVLKYIVARER----------NYSRIVAGPGHSIVV 257

Query: 128 SNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
           +     +S G++  G LG G +T        I       + Q +        V  +G V+
Sbjct: 258 TTKGDAYSFGANCWGQLGLG-DTEDRFKPCLIRSLQGIKITQAAVGSRQTMLVSDTGSVY 316

Query: 187 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
             G  S       D    I  P++VE+LKGV   Q   G  F+ FL+  G V+T      
Sbjct: 317 AFGKGSFVWEELSDAADHITTPKIVESLKGVFVVQAAIGGYFSAFLSREGQVYTISWGRT 376

Query: 247 GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY--MLAVTGNGV-VYSFGSGSNFCL 302
            +LGH        P+ ++ PLE V  V QI+AG  Y  MLA    G+ VYS G G    L
Sbjct: 377 ERLGHSSDPSDVEPRLLSGPLEGV-LVAQISAGNCYLLMLAYQPTGMSVYSVGCGLGGKL 435

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           GHG ++++   + I+ F     + V V+AG  H  AL   G V TWG G+ G LGHGDE 
Sbjct: 436 GHGCKNNKGTTKLIEHFLTLSFNPVSVAAGTWHAAALGDDGRVCTWGWGHTGCLGHGDEE 495

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR- 421
            + LP  +  L +  AV V   +  TFV+ D G  Y FG     ++GF +   +      
Sbjct: 496 YRVLPTVVQGLSNVKAVHVSTGEYTTFVVSDNGDTYSFGSAESLNIGFQEDEEAADDADF 555

Query: 422 --PRILDSLRA--HHVSQIST-----------GLYHTVVVTDRGRLFGFGDNERAQLG 464
             P +++SL+       QIST           G  HT  + + G+L+ FG   + QLG
Sbjct: 556 STPSLVESLKVLNDKAVQISTTNSSYWLNSEMGYPHTFALMESGKLYAFGGGIKGQLG 613



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 115/253 (45%), Gaps = 15/253 (5%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           ++ AG   +  +T +G  ++ G+N  GQLG GDT DR  P  I  L+ +  + Q A G  
Sbjct: 246 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQGI-KITQAAVGSR 304

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             + V+  G VY+FG GS       +  D +  P+ +++   KG+ VV+ + G      L
Sbjct: 305 QTMLVSDTGSVYAFGKGSFVWEELSDAADHITTPKIVESL--KGVFVVQAAIGGYFSAFL 362

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DTG- 395
              G VYT   G    LGH  +     P  LS  L+  L  Q+ A      +L    TG 
Sbjct: 363 SREGQVYTISWGRTERLGHSSDPSDVEPRLLSGPLEGVLVAQISAGNCYLLMLAYQPTGM 422

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRL 452
           SVY  G    G LG    G  +     ++++   +L  + VS ++ G +H   + D GR+
Sbjct: 423 SVYSVGCGLGGKLG---HGCKNNKGTTKLIEHFLTLSFNPVS-VAAGTWHAAALGDDGRV 478

Query: 453 FGFGDNERAQLGH 465
             +G      LGH
Sbjct: 479 CTWGWGHTGCLGH 491



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 2/147 (1%)

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
           R+ AG  H + + + G  Y++G    G LG GD  D+  P  + SL+     Q     R+
Sbjct: 246 RIVAGPGHSIVVTTKGDAYSFGANCWGQLGLGDTEDRFKPCLIRSLQGIKITQAAVGSRQ 305

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T ++ DTGSVY FG   F      D   +D +  P+I++SL+   V Q + G Y +  ++
Sbjct: 306 TMLVSDTGSVYAFGKGSFVWEELSD--AADHITTPKIVESLKGVFVVQAAIGGYFSAFLS 363

Query: 448 DRGRLFGFGDNERAQLGHDTLRGCLEP 474
             G+++        +LGH +    +EP
Sbjct: 364 REGQVYTISWGRTERLGHSSDPSDVEP 390


>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 432

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 140/421 (33%), Positives = 204/421 (48%), Gaps = 30/421 (7%)

Query: 64  LCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYH 123
           +C   +I+  M+   + +L  RC G+WK VLR+L + E            + Q   G  H
Sbjct: 1   MCMKRAIFKPMTTEERQDLKQRCGGSWKLVLRYLLAGE------ACCRREKSQAIAGPGH 54

Query: 124 TLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 182
           ++ + S   V+S GS+  G LGHG  T +      I       ++Q +A       +  S
Sbjct: 55  SIAVTSKGDVYSFGSNSSGQLGHGT-TEEEWRPKPIRTLQGIRIIQAAAGAGRTMLITDS 113

Query: 183 GQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
           GQV+  G +S     +    ++ +  PRLVE+LK +   Q   G  FT  L+  G V+T 
Sbjct: 114 GQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREGRVYTF 173

Query: 242 GSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML--AVTGNGV-VYSFGSG 297
              + G+LGH  D+ D      +  LE++  VVQIAAG  Y+L  A   +G+ VYS G G
Sbjct: 174 SWGSDGKLGHHTDSNDMEPHPLLGALEDI-PVVQIAAGYCYLLCLACQPSGMSVYSVGCG 232

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LGHG + DE  PR I+ F+   +  + +SAG  H   +   G V TWG G  G LG
Sbjct: 233 LGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCLG 292

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           HG+E  +  P+ + +L +  AV V      TFV+ + G VY FG     SLG     V D
Sbjct: 293 HGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGESASLGH--NAVID 350

Query: 418 -------KVLRPRILDSLRA--HHVSQIS--TGLY---HTVVVTDRGRLFGFGDNERAQL 463
                   VL P ++ SL+     V QIS    +Y   HT  +T+ G+L+ FG  ++ QL
Sbjct: 351 AEGNRHANVLNPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 410

Query: 464 G 464
           G
Sbjct: 411 G 411



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 148/309 (47%), Gaps = 15/309 (4%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           Q  A   H+  V   G V++ G NSS   GH  T    +RP+ +  L+G+   Q  AG  
Sbjct: 47  QAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEE-WRPKPIRTLQGIRIIQAAAGAG 105

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            T  +T  G V+  G ++ G+  +G    +    P+ +  L+ +  VVQ A G  +   +
Sbjct: 106 RTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLVESLKNI-FVVQAAIGNFFTAVL 164

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---DSS 342
           +  G VY+F  GS+  LGH    ++++P  +       I VV+++AG  +++ L    S 
Sbjct: 165 SREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALED-IPVVQIAAGYCYLLCLACQPSG 223

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---VCARKRKTFVLVDTGSVYG 399
             VY+ G G  G LGHG   D+  P  +   ++ L +Q   + A      V+   G V  
Sbjct: 224 MSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQT-LNLQPMVISAGAWHAAVVGRDGRVCT 282

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +GW  +G LG    G  +    P+++D+L       ++TG Y T VV + G ++ FG  E
Sbjct: 283 WGWGRYGCLG---HGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDGDVYSFGCGE 339

Query: 460 RAQLGHDTL 468
            A LGH+ +
Sbjct: 340 SASLGHNAV 348



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%)

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           AG  H +A+ S G VY++G    G LGHG   ++  P+P+ +L+    +Q  A   +T +
Sbjct: 50  AGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIRTLQGIRIIQAAAGAGRTML 109

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           + D+G VY FG   FG   +  +G S  V+ PR+++SL+   V Q + G + T V++  G
Sbjct: 110 ITDSGQVYAFGKDSFGEAEYGGQG-SKTVIAPRLVESLKNIFVVQAAIGNFFTAVLSREG 168

Query: 451 RLFGFGDNERAQLGHDTLRGCLEP 474
           R++ F      +LGH T    +EP
Sbjct: 169 RVYTFSWGSDGKLGHHTDSNDMEP 192


>gi|374921939|gb|AFA26147.1| E3 ubiquitin-protein ligase HERC2-like protein, partial [Lolium
           perenne]
          Length = 102

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 77/102 (75%), Positives = 88/102 (86%)

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
           QVCARKRKTFVL D GSV  FGWMGFGSLGFPDRG SDKV++PR+LDSLR H+VSQISTG
Sbjct: 1   QVCARKRKTFVLTDEGSVIAFGWMGFGSLGFPDRGSSDKVMQPRVLDSLRGHYVSQISTG 60

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           LYHTV VT++G +FGFGDNERAQLG + +R CL+PTEI   +
Sbjct: 61  LYHTVAVTNKGIVFGFGDNERAQLGQEYIRECLKPTEIMFHK 102


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/353 (33%), Positives = 181/353 (51%), Gaps = 14/353 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H++ L+S + V S G    G LGHG +    +S T ++      VV V+   +H
Sbjct: 21  ISAGASHSVALLSGNVVCSWGRGEDGQLGHG-DAEDRLSPTYLSALDGHEVVSVTCGADH 79

Query: 176 AAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
                +S  QV++ G       GH +++  +F P+ ++AL G+  KQ+  G +    +T+
Sbjct: 80  TTAYSESFTQVYSWGWGDFGRLGHGNSS-DLFTPQPIKALHGLRIKQIACGDSHCLAVTM 138

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG G T D   P+ I   + V SV  +AAG  +  AVT +G +Y +
Sbjct: 139 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SVKMVAAGAEHTAAVTEDGELYGW 197

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G+++D L P  + T   +G+ +V+V+ G  H +++ SSG +YT+G    G
Sbjct: 198 GWGRYGNLGLGDRNDRLVPEKVSTV--EGVKMVKVACGWRHTISVSSSGGLYTYGWSKYG 255

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D   P  L +L+ +L  ++    R T  L   G +YG+GW  FG +     G
Sbjct: 256 QLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQV-----G 310

Query: 415 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           V D V    P  +       V  IS G  HT+ VT+R  +F +G     QLGH
Sbjct: 311 VGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGH 363



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 7/257 (2%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           ++AG + +  L     V + G    GQLGHGD  DR +P  ++ L+    VV +  G  +
Sbjct: 21  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGH-EVVSVTCGADH 79

Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             A + +   VYS+G G    LGHG   D   P+ I+     G+ + +++ GD H +A+ 
Sbjct: 80  TTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALH--GLRIKQIACGDSHCLAVT 137

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G V +WG+   G LG G   D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 138 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGW 197

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DR   +  L P  + ++    + +++ G  HT+ V+  G L+ +G ++ 
Sbjct: 198 GWGRYGNLGLGDR---NDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKY 254

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH      L P ++
Sbjct: 255 GQLGHGDFEDHLTPHKL 271



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 6/261 (2%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  V+A   
Sbjct: 125 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSVKMVAAGAE 183

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G+++  G       G  D N  +  P  V  ++GV   +V  G   T  ++ 
Sbjct: 184 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSTVEGVKMVKVACGWRHTISVSS 242

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++T G + +GQLGHGD  D  TP  +  L+E   + +I+ G  + +A+T +G +Y +
Sbjct: 243 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQE-NLISEISGGWRHTMALTSDGKLYGW 301

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      +G G+  D   P  ++    +   VV +S G  H +A+     V++WG+G  G
Sbjct: 302 GWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSWGRGTNG 359

Query: 355 ALGHGDEIDKTLPEPLSSLKS 375
            LGHG+ ID+ +P+ +  L +
Sbjct: 360 QLGHGESIDRNIPKMIEVLSA 380



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 6/211 (2%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V+ I+AG S+ +A+    VV S+G G +  LGHG+  D L P  +      G  VV V+ 
Sbjct: 18  VLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSAL--DGHEVVSVTC 75

Query: 332 GDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           G +H  A   S   VY+WG G  G LGHG+  D   P+P+ +L      Q+         
Sbjct: 76  GADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLA 135

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V  +G    G LG    G ++  L P+ + + +   V  ++ G  HT  VT+ G
Sbjct: 136 VTMDGEVQSWGRNQNGQLGL---GTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDG 192

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            L+G+G      LG       L P ++   E
Sbjct: 193 ELYGWGWGRYGNLGLGDRNDRLVPEKVSTVE 223



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G    + V   +++      +V+V+    H
Sbjct: 178 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSTVEGVKMVKVACGWRH 236

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EAL+     +++ G   T  LT  
Sbjct: 237 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEALQENLISEISGGWRHTMALTSD 295

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G GD +D  +P  +  P E+   VV I+ G  + LAVT    V+S+
Sbjct: 296 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSW 353

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 354 GRGTNGQLGHGESIDRNIPKMIEVLSADG 382



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 4/167 (2%)

Query: 107 VETSAGNQM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V T  G +M ++  G  HT+ +S+S  +++ G S  G LGHG +    ++  ++      
Sbjct: 219 VSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG-DFEDHLTPHKLEALQEN 277

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            + ++S    H   +   G+++  G N     G  D N     P  V+         ++ 
Sbjct: 278 LISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISC 336

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
           G   T  +T R +V + G  T+GQLGHG+++DR  PK I  L   GS
Sbjct: 337 GWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 383


>gi|357164242|ref|XP_003579993.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
           [Brachypodium distachyon]
          Length = 548

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 222/478 (46%), Gaps = 35/478 (7%)

Query: 17  LIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSR 76
           ++  +L+S  L   DLA LE T K F       P    SL +LAA  +C   +++  M  
Sbjct: 60  VLLRVLSSCELDPKDLAALEATCKFFRDPANFPPDLALSLPELAAFDMCQERAMFKPMKP 119

Query: 77  NVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSC 135
             +  L  RC G+WK VLR++   E      +     + Q+  G  H+++++    V+S 
Sbjct: 120 KEKEWLKQRCGGSWKLVLRYILVGE------KNYRREKSQVIAGPGHSIVVTAKGDVYSF 173

Query: 136 GSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG-DN 191
           G +  G LG G    +   C+    I+      + Q +        V  +G V+T G D 
Sbjct: 174 GVNCSGQLGLGDRENKFKPCL----ISSLQGIRITQAAVGLRRTMLVSDTGSVYTFGLDT 229

Query: 192 SSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
             +   +  +N   +  P+L+E+LKGV   Q + G  F+  L+  G V+T       +LG
Sbjct: 230 FGWLDQYGGSNGNCVNSPKLLESLKGVFVVQASIGGYFSAVLSREGRVYTFSWGRAERLG 289

Query: 251 HGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV---VYSFGSGSNFCLGHGE 306
           H   L    P+ ++ PL++V  V QIAAG  Y+L ++ +     VYS G G    LGHG 
Sbjct: 290 HSSELSDVEPRLLSGPLDDV-LVAQIAAGNCYLLLLSYHPTGMSVYSLGCGLGGKLGHGN 348

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KT 365
           +  E  P+ I  F+   I  + +SAG  H   +   G V+TWG    G LGHGD  D  T
Sbjct: 349 KDFEGVPKLIGHFQAFNIRPMSISAGAWHAAVMCRDGRVFTWGWNSSGCLGHGDSEDCVT 408

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK-VLRPR- 423
           LP  +  L +  AV V A +  TFV+ D G VY FG+ G  +LGF D    ++ VL P+ 
Sbjct: 409 LPRAVEGLNNVKAVHVSAGEWCTFVVADNGDVYSFGFRGSHNLGFQDNDAENEDVLPPKP 468

Query: 424 --ILDSLRAHHVSQISTGLY---------HTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             +L  L    V    T  Y         HTV + + G ++ FG     QLG   + G
Sbjct: 469 ATLLADLNERFVQISPTSAYNWNNAEQPHHTVALAESGIVYAFGGGSMGQLGVKLVEG 526



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 3/158 (1%)

Query: 317 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
           + +RR+   V+   AG  H + + + G VY++G    G LG GD  +K  P  +SSL+  
Sbjct: 145 KNYRREKSQVI---AGPGHSIVVTAKGDVYSFGVNCSGQLGLGDRENKFKPCLISSLQGI 201

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
              Q     R+T ++ DTGSVY FG   FG L        + V  P++L+SL+   V Q 
Sbjct: 202 RITQAAVGLRRTMLVSDTGSVYTFGLDTFGWLDQYGGSNGNCVNSPKLLESLKGVFVVQA 261

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           S G Y + V++  GR++ F      +LGH +    +EP
Sbjct: 262 SIGGYFSAVLSREGRVYTFSWGRAERLGHSSELSDVEP 299



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 119/261 (45%), Gaps = 15/261 (5%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           QV AG   +  +T +G V++ G N  GQLG GD  ++  P  I+ L+ +  + Q A G  
Sbjct: 153 QVIAGPGHSIVVTAKGDVYSFGVNCSGQLGLGDRENKFKPCLISSLQGI-RITQAAVGLR 211

Query: 281 YMLAVTGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
             + V+  G VY+FG  +   L   G    +    P+ +++   KG+ VV+ S G     
Sbjct: 212 RTMLVSDTGSVYTFGLDTFGWLDQYGGSNGNCVNSPKLLESL--KGVFVVQASIGGYFSA 269

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV--DT 394
            L   G VYT+  G    LGH  E+    P  LS  L   L  Q+ A      +L    T
Sbjct: 270 VLSREGRVYTFSWGRAERLGHSSELSDVEPRLLSGPLDDVLVAQIAAGNCYLLLLSYHPT 329

Query: 395 G-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTDRGR 451
           G SVY  G    G LG  ++   D    P+++   +A ++    IS G +H  V+   GR
Sbjct: 330 GMSVYSLGCGLGGKLGHGNK---DFEGVPKLIGHFQAFNIRPMSISAGAWHAAVMCRDGR 386

Query: 452 LFGFGDNERAQLGHDTLRGCL 472
           +F +G N    LGH     C+
Sbjct: 387 VFTWGWNSSGCLGHGDSEDCV 407


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 181/354 (51%), Gaps = 15/354 (4%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 173
           ++ G  H++ L+S+ +V S G    G LGHG    + V    +  + P  A VV +  ++
Sbjct: 25  VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVV-ICGAD 83

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +  A+  +  Q+++ G       GH +++  +F P+ +EAL+G+  KQ+  G +    +T
Sbjct: 84  HTTAYSDEQMQLYSWGWGDFGRLGHGNSSD-VFHPQPIEALQGIKIKQIACGDSHCLAVT 142

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G VH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  A+  +G +Y 
Sbjct: 143 DAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGV-CVKMIAAGAEHTAAILEDGDLYG 201

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G G    LG G+++D L P  + +   +G  +V V+ G  H V + SSG +YT+G    
Sbjct: 202 WGWGQYGNLGLGDRNDRLVPEKVSSV--EGEKMVLVACGWRHTVTVSSSGDLYTYGWSKY 259

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LGHGD  D  +P  L +LK     Q+    R T  +   G +YG+GW  FG +     
Sbjct: 260 GQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQV----- 314

Query: 414 GVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           GV+D V    P  +       V+Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 315 GVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGH 368



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 164/322 (50%), Gaps = 12/322 (3%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEA--LKGVPCKQV 222
           V  VSA  NH+  +L S  V + G       GH D  +RP+  P L+    + G+    +
Sbjct: 22  VALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV--PTLLSGFDVPGIASVVI 79

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
               + T +   +  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 80  CGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGI-KIKQIACGDSHC 138

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           LAVT  G V+S+G   N  LG G   D L P+ I  F  +G+ V  ++AG EH  A+   
Sbjct: 139 LAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAF--EGVCVKMIAAGAEHTAAILED 196

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G +Y WG G  G LG GD  D+ +PE +SS++    V V    R T  +  +G +Y +GW
Sbjct: 197 GDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGW 256

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
             +G LG  D    +  L P  L++L+   +SQI+ G  HT+ V   G+L+G+G N+  Q
Sbjct: 257 SKYGQLGHGDF---EDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQ 313

Query: 463 LG-HDTLRGCLEPTEIFIQEME 483
           +G  D +  C     IF  E +
Sbjct: 314 VGVADNVDHCSPVQVIFPDEQK 335



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 6/259 (2%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++++  V S G +  G LG G  T   +   +I+      V  ++A   
Sbjct: 130 QIACGDSHCLAVTDAGQVHSWGRNQNGQLGLG-NTEDSLLPQKIHAFEGVCVKMIAAGAE 188

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A +L+ G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 189 HTAAILEDGDLYGWGWGQYGNLGLGDRNDRLV-PEKVSSVEGEKMVLVACGWRHTVTVSS 247

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++T G + +GQLGHGD  D   P  +  L++   + QIA G  + +AV G+G +Y +
Sbjct: 248 SGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDR-FISQIAGGWRHTMAVAGDGKLYGW 306

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      +G  +  D   P  +Q        V +V+ G  H +AL  +  V++WG+G  G
Sbjct: 307 GWNKFGQVGVADNVDHCSP--VQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSG 364

Query: 355 ALGHGDEIDKTLPEPLSSL 373
            LGHG+ ID+  P+ + +L
Sbjct: 365 QLGHGEIIDRNTPKMIDAL 383



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 3/214 (1%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           +V  ++AG ++ +A+  +  V S+G G +  LGHG+  D   P  +  F   GI  V + 
Sbjct: 21  TVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVIC 80

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
             D      D    +Y+WG G  G LGHG+  D   P+P+ +L+     Q+         
Sbjct: 81  GADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHCLA 140

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           + D G V+ +G    G LG    G ++  L P+ + +     V  I+ G  HT  + + G
Sbjct: 141 VTDAGQVHSWGRNQNGQLGL---GNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDG 197

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
            L+G+G  +   LG       L P ++   E E+
Sbjct: 198 DLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEK 231



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 183 IAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVP-EKVSSVEGEKMVLVACGWRH 241

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EALK     Q+  G   T  +   
Sbjct: 242 TVTVSSSGDLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDRFISQIAGGWRHTMAVAGD 300

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G  D +D  +P + I P E+   V Q+A G  + LA+T N  V+S+
Sbjct: 301 GKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQ--KVAQVACGWRHTLALTENKNVFSW 358

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G++  LGHGE  D   P+ I      G
Sbjct: 359 GRGTSGQLGHGEIIDRNTPKMIDALSLDG 387


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 175/354 (49%), Gaps = 12/354 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 171
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 30  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 89

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 90  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 148

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 149 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 207

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 208 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 265

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G  
Sbjct: 266 KYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVG 325

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           D   ++    P  ++      V Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 326 D---NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGH 376



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 156/303 (51%), Gaps = 10/303 (3%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 221
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 27  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 86

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 87  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 145

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 146 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 203

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +  +GS+Y +G
Sbjct: 204 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYG 263

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
           W  +G LG  D    +  L P  L++L+   +SQIS G  HT+ +   G+L+G+G N+  
Sbjct: 264 WSKYGQLGHGDF---EDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFG 320

Query: 462 QLG 464
           Q+G
Sbjct: 321 QVG 323



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 12/273 (4%)

Query: 212 EALKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLE 267
           EA+   P + V   +AG + +  L   G V + G    GQLGHGD  DRP P  + A  +
Sbjct: 17  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFD 76

Query: 268 EV--GSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
           +   G    +  G  +  A +   + +YS+G G    LGHG   D   P+ IQ    +G+
Sbjct: 77  DAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQAL--QGV 134

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
            + +++ GD H +A+  +G+V++WG+   G LG G+  D  LP+ + + +      + A 
Sbjct: 135 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAG 194

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              T  + + G +YG+GW  +G+LG  DR   D  L P  + S+    +  ++ G  HT+
Sbjct: 195 AEHTAAVTEDGDLYGWGWGRYGNLGLGDR---DDRLIPEKVSSVNGQKMVLVACGWRHTI 251

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            V+  G ++ +G ++  QLGH      L P ++
Sbjct: 252 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 284



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 10/263 (3%)

Query: 116 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 138 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 196

Query: 175 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 197 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 253

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+  +G +Y
Sbjct: 254 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQISGGWRHTMALAADGKLY 312

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G      +G G+  D   P  +Q        VV+V+ G  H +AL  +  V++WG+G 
Sbjct: 313 GWGWNKFGQVGVGDNEDHCSP--VQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGT 370

Query: 353 CGALGHGDEIDKTLPEPLSSLKS 375
            G LGHG+ +D+ +P+ + +L S
Sbjct: 371 SGQLGHGEIVDRNIPKMIDALSS 393



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 191 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 249

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  L   
Sbjct: 250 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAAD 308

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G  + LA+T    V+S+
Sbjct: 309 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTLALTEAKNVFSW 366

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G++  LGHGE  D   P+ I      G
Sbjct: 367 GRGTSGQLGHGEIVDRNIPKMIDALSSDG 395



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 3/159 (1%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT+ +S+S S+++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 243 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDTTISQISGGWRH 301

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              +   G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 302 TMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 360

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            +V + G  T GQLGHG+ +DR  PK I  L   GS  +
Sbjct: 361 KNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACK 399


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 175/354 (49%), Gaps = 12/354 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 171
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 85  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 144 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 202

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 203 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 260

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G  
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVG 320

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           D   ++    P  ++      V Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 321 D---NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGH 371



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 156/303 (51%), Gaps = 10/303 (3%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 221
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 140

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 198

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +  +GS+Y +G
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYG 258

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
           W  +G LG  D    +  L P  L++L+   +SQIS G  HT+ +   G+L+G+G N+  
Sbjct: 259 WSKYGQLGHGDF---EDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFG 315

Query: 462 QLG 464
           Q+G
Sbjct: 316 QVG 318



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 12/273 (4%)

Query: 212 EALKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLE 267
           EA+   P + V   +AG + +  L   G V + G    GQLGHGD  DRP P  + A  +
Sbjct: 12  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFD 71

Query: 268 EV--GSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
           +   G    +  G  +  A +   + +YS+G G    LGHG   D   P+ IQ    +G+
Sbjct: 72  DAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQAL--QGV 129

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
            + +++ GD H +A+  +G+V++WG+   G LG G+  D  LP+ + + +      + A 
Sbjct: 130 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAG 189

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              T  + + G +YG+GW  +G+LG  DR   D  L P  + S+    +  ++ G  HT+
Sbjct: 190 AEHTAAVTEDGDLYGWGWGRYGNLGLGDR---DDRLIPEKVSSVNGQKMVLVACGWRHTI 246

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            V+  G ++ +G ++  QLGH      L P ++
Sbjct: 247 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 279



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 10/263 (3%)

Query: 116 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 191

Query: 175 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 248

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+  +G +Y
Sbjct: 249 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQISGGWRHTMALAADGKLY 307

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G      +G G+  D   P  +Q        VV+V+ G  H +AL  +  V++WG+G 
Sbjct: 308 GWGWNKFGQVGVGDNEDHCSP--VQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGT 365

Query: 353 CGALGHGDEIDKTLPEPLSSLKS 375
            G LGHG+ +D+ +P+ + +L S
Sbjct: 366 SGQLGHGEIVDRNIPKMIDALSS 388



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 244

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  L   
Sbjct: 245 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQISGGWRHTMALAAD 303

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G  + LA+T    V+S+
Sbjct: 304 GKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGWRHTLALTEAKNVFSW 361

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G++  LGHGE  D   P+ I      G
Sbjct: 362 GRGTSGQLGHGEIVDRNIPKMIDALSSDG 390



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 3/159 (1%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT+ +S+S S+++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDTTISQISGGWRH 296

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              +   G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 297 TMALAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 355

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            +V + G  T GQLGHG+ +DR  PK I  L   GS  +
Sbjct: 356 KNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACK 394


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 116/324 (35%), Positives = 166/324 (51%), Gaps = 17/324 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+ +SA  +H+  +L    V + G       GH D    +  P  + AL G     VT G
Sbjct: 10  VLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDGHEIVSVTCG 68

Query: 226 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            + T  +   R  V++ G    G+LGHG++ D  TPK I  L  +  + QIA G S+ LA
Sbjct: 69  ADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGL-KIRQIACGDSHCLA 127

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI +  V+AG EH  A+   G 
Sbjct: 128 VTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--EGISIKMVAAGAEHTAAVTEDGE 185

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           ++ WG G  G LG GD  D+ +P+ +SS+     V V    R T  +   G +Y +GW  
Sbjct: 186 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 245

Query: 405 FGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
           +G LG   F DR      L P  L++LR  ++SQIS G  HT+ +T  G+L+G+G N+  
Sbjct: 246 YGQLGHGDFEDR------LVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFG 299

Query: 462 QLGH-DTLRGCLEPTEI-FIQEME 483
           Q+G  D +  C  P +I F Q+ +
Sbjct: 300 QVGAGDNIDHC-SPIQIKFPQDQK 322



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 180/351 (51%), Gaps = 10/351 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H++ L+S + V S G    G LGHG +    +S T+++      +V V+   +H
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDGHEIVSVTCGADH 71

Query: 176 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
             A+ +   +V++ G       GH +++  +  P+ ++AL G+  +Q+  G +    +T+
Sbjct: 72  TTAYSVARTEVYSWGWGDFGRLGHGNSS-DLLTPKPIKALHGLKIRQIACGDSHCLAVTM 130

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG G T D   P+ I   E + S+  +AAG  +  AVT +G ++ +
Sbjct: 131 EGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGI-SIKMVAAGAEHTAAVTEDGELFGW 189

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G+++D L P+ + +    G  +V V+ G  H +++ S G +YT+G    G
Sbjct: 190 GWGRYGNLGLGDRNDRLVPQKVSSV--DGDKMVMVACGWRHTISVSSLGGLYTYGWSKYG 247

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D+ +P  L +L+     Q+    R T  L   G +YG+GW  FG +G  D  
Sbjct: 248 QLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD-- 305

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            +     P  +   +   V QIS G  HT+ VTD+  +F +G     QLGH
Sbjct: 306 -NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGH 355



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 6/259 (2%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++    V S G +  G LG G  T   +   +I       +  V+A   
Sbjct: 117 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-TTEDSLVPQKIQAFEGISIKMVAAGAE 175

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G++F  G       G  D N  +  P+ V ++ G     V  G   T  ++ 
Sbjct: 176 HTAAVTEDGELFGWGWGRYGNLGLGDRNDRLV-PQKVSSVDGDKMVMVACGWRHTISVSS 234

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++T G + +GQLGHGD  DR  P  +  L    ++ QI+ G  + +A+T +G +Y +
Sbjct: 235 LGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRG-DNISQISGGWRHTMALTTDGKLYGW 293

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      +G G+  D   P  IQ    +   V+++S G  H +A+     V++WG+G  G
Sbjct: 294 GWNKFGQVGAGDNIDHCSP--IQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNG 351

Query: 355 ALGHGDEIDKTLPEPLSSL 373
            LGHG+ +D+  P  L +L
Sbjct: 352 QLGHGESVDRNTPMILEAL 370



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  +F  G    G LG G    + V   +++      +V V+    H
Sbjct: 170 VAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVP-QKVSSVDGDKMVMVACGWRH 228

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V   G ++T G +     GH D    +  P  +EAL+G    Q++ G   T  LT  
Sbjct: 229 TISVSSLGGLYTYGWSKYGQLGHGDFEDRLV-PHRLEALRGDNISQISGGWRHTMALTTD 287

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G GD +D  +P  I  P ++   V+QI+ G  + LAVT    V+S+
Sbjct: 288 GKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQ--KVIQISCGWRHTLAVTDKQNVFSW 345

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LGHGE  D   P  ++     G
Sbjct: 346 GRGTNGQLGHGESVDRNTPMILEALSVDG 374


>gi|224152872|ref|XP_002337285.1| predicted protein [Populus trichocarpa]
 gi|222838689|gb|EEE77054.1| predicted protein [Populus trichocarpa]
          Length = 91

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 74/87 (85%), Positives = 83/87 (95%)

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
           MGFGSLGFPDRG+SDKV+RPR+LDSLRA HVSQISTGLYHTVVVT+RG++FGFGDNERAQ
Sbjct: 1   MGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNRGQMFGFGDNERAQ 60

Query: 463 LGHDTLRGCLEPTEIFIQEMEEDTGLA 489
           LGHDTLRGCL+PTEIF+QE  +DT LA
Sbjct: 61  LGHDTLRGCLQPTEIFVQETADDTDLA 87



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 199 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 255
           R  +  + RPR++++L+     Q++ GL  T  +T RG +   G N   QLGH DTL
Sbjct: 11  RGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNRGQMFGFGDNERAQLGH-DTL 66


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 181/364 (49%), Gaps = 10/364 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ--VSASE 173
           ++ G  H++ L++ + + S G    G LGHG    + V      F +AA  +   +  ++
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +  A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T
Sbjct: 87  HTTAYSEDEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGIKIKQIACGDSHCLAVT 145

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           + G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y 
Sbjct: 146 MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGV-CVKMIAAGAEHTAAVTEDGDLYG 204

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G G    LG G+++D L P  + +   +G  +V ++ G  H + + SSG +YT+G    
Sbjct: 205 WGWGRYGNLGLGDRNDRLVPEKVSSV--EGEKMVLIACGWRHTITVSSSGSLYTYGWSKY 262

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G  D 
Sbjct: 263 GQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD- 321

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
             +D    P  +       V+Q++ G  HT+  T++  +F +G     QLGH  +    +
Sbjct: 322 --TDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNK 379

Query: 474 PTEI 477
           P  I
Sbjct: 380 PVMI 383



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 167/332 (50%), Gaps = 14/332 (4%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEA 213
           R + P A  VV VSA  +H+  +L    + + G       GH D      P        A
Sbjct: 17  REDPPPA--VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAA 74

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
             G+    +    + T +      V++ G    G+LGHG++ D  TP+ +  L+ +  + 
Sbjct: 75  APGI-TSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGI-KIK 132

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
           QIA G S+ LAVT  G V S+G   N  LG G   D L P+ IQ+F  +G+ V  ++AG 
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSF--EGVCVKMIAAGA 190

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           EH  A+   G +Y WG G  G LG GD  D+ +PE +SS++    V +    R T  +  
Sbjct: 191 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSS 250

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +GS+Y +GW  +G LG  D    +  L P  L++L+   +SQIS G  HT+ +T  G+L+
Sbjct: 251 SGSLYTYGWSKYGQLGHGDF---EDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLY 307

Query: 454 GFGDNERAQLG-HDTLRGCLEPTEIFIQEMEE 484
           G+G N+  Q+G  DT   C  P ++   E ++
Sbjct: 308 GWGWNKFGQVGVGDTDDHCF-PVQVKFPEDQK 338



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 6/259 (2%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQSFEGVCVKMIAAGAE 191

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G ++  G       G  D N  +  P  V +++G     +  G   T  ++ 
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PEKVSSVEGEKMVLIACGWRHTITVSS 250

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++T G + +GQLGHGD  D   P  +  L++  S+ QI+ G  + +A+T +G +Y +
Sbjct: 251 SGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKD-SSISQISGGWRHTMALTSDGKLYGW 309

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      +G G+  D   P  +Q    +   V +V+ G  H +A      V++WG+G  G
Sbjct: 310 GWNKFGQVGVGDTDDHCFP--VQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSG 367

Query: 355 ALGHGDEIDKTLPEPLSSL 373
            LGHG+ +D+  P  + +L
Sbjct: 368 QLGHGEIVDRNKPVMIDAL 386



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V ++    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-EKVSSVEGEKMVLIACGWRH 244

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  LT  
Sbjct: 245 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSSISQISGGWRHTMALTSD 303

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G ++  G N  GQ+G GDT D   P  +    E   V Q+A G  + LA T    V+S+G
Sbjct: 304 GKLYGWGWNKFGQVGVGDTDDHCFPVQVK-FPEDQKVAQVACGWRHTLAFTEKKNVFSWG 362

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            G++  LGHGE  D  +P  I      G
Sbjct: 363 RGTSGQLGHGEIVDRNKPVMIDALSPDG 390



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 17/207 (8%)

Query: 107 VETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V +  G +M  I  G  HT+ +S+S S+++ G S  G LGHG      V   ++     +
Sbjct: 227 VSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDS 285

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            + Q+S    H   +   G+++  G N     G  DT+   F P  V+  +     QV  
Sbjct: 286 SISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCF-PVQVKFPEDQKVAQVAC 344

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP-------------KSIAPLEEVGS 271
           G   T   T + +V + G  T GQLGHG+ +DR  P             K + P   V  
Sbjct: 345 GWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALSPDGPGCKKLEPSTAVPF 404

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGS 298
             ++   PS   A+  +  V + G G+
Sbjct: 405 AAKVWVSPSERYAIVPDEKVPNSGEGT 431


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 192/378 (50%), Gaps = 15/378 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + ++ G  HT+ L+S   V S G    G LGHG    + +    I+      +  ++   
Sbjct: 17  ISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLV-ISALDDCEISSITCGA 75

Query: 174 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           +H     +S + V++ G       GH +++  +F PR ++ LKG+  KQ+  G +    +
Sbjct: 76  DHTTARSESTRTVYSWGWGDFGRLGHGNSS-DLFIPRAIKGLKGLEIKQIACGDSHCLAI 134

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G VH+ G N +GQLG G T D   P  +A  E + +V  +AAG  +  AVT +G +Y
Sbjct: 135 TGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGI-AVKMLAAGAEHTAAVTESGKLY 193

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G G    LG G+++D L P  +     + +++V  + G  H +A+ +SG +YT+G   
Sbjct: 194 GWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLV--ACGWRHTIAVANSGNLYTFGWSK 251

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHGD  D  +P  + +LK+     V    R T  L + G +YG+GW  FG +G   
Sbjct: 252 YGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGC-- 309

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGC 471
            G +D    P+++  +    V++++ G  HTV +TDRG ++ +G     QLGH D +  C
Sbjct: 310 -GNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRC 368

Query: 472 LEPTEIFIQEMEEDTGLA 489
           + P  I   E+    GLA
Sbjct: 369 V-PKRI---ELLSADGLA 382



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 14/303 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+ VSA  +H   +L    V + G       GH D       P ++ AL       +T G
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL-PLVISALDDCEISSITCG 74

Query: 226 LNFTGFLTIRGH----VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            + T   T R      V++ G    G+LGHG++ D   P++I  L+ +  + QIA G S+
Sbjct: 75  ADHT---TARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGL-EIKQIACGDSH 130

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            LA+TG+G V+S+G   N  LG G   D L P  +  F  +GI V  ++AG EH  A+  
Sbjct: 131 CLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAF--EGIAVKMLAAGAEHTAAVTE 188

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           SG +Y WG G  G LG GD  D+ +P  ++++       V    R T  + ++G++Y FG
Sbjct: 189 SGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFG 248

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
           W  +G LG  D    +  L P  + +L+   +  +S G  HTV + + G L+G+G N+  
Sbjct: 249 WSKYGQLGHGD---FEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFG 305

Query: 462 QLG 464
           Q+G
Sbjct: 306 QVG 308



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 113/259 (43%), Gaps = 58/259 (22%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG---EQH-------------------- 308
           V+ ++AG S+ +A+    +V S+G G +  LGHG   E+H                    
Sbjct: 16  VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGA 75

Query: 309 ------------------------------DELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
                                         D   PRAI+    KG+ + +++ GD H +A
Sbjct: 76  DHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGL--KGLEIKQIACGDSHCLA 133

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +   G V++WG+   G LG G   D  +P  +++ +      + A    T  + ++G +Y
Sbjct: 134 ITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLY 193

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           G+GW  +G+LG  DR   +  L P  + ++    ++ ++ G  HT+ V + G L+ FG +
Sbjct: 194 GWGWGRYGNLGLGDR---NDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWS 250

Query: 459 ERAQLGHDTLRGCLEPTEI 477
           +  QLGH      L P ++
Sbjct: 251 KYGQLGHGDFEDHLVPHQV 269



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 9/179 (5%)

Query: 107 VETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V    G +M  +  G  HT+ ++NS ++++ G S  G LGHG      V   ++      
Sbjct: 217 VAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPH-QVQALKNK 275

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
            +  VS    H   + + G+++  G N      CG+ D +     P+L+  +      +V
Sbjct: 276 TIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNS---PKLITGIVNEKVTRV 332

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPS 280
           T G   T  +T RG+V++ G  T GQLGHGD +DR  PK I  L   G   Q I + PS
Sbjct: 333 TCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLSADGLACQGIESSPS 391


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 181/366 (49%), Gaps = 10/366 (2%)

Query: 101 EHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 159
           E ++D V       + I+ G  H++ L+S   V S G    G LGHG +     S T+++
Sbjct: 4   EMAADEVTAPPRTVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS 62

Query: 160 FPSAAHVVQVSASENHAAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
                 +V V+   +H     QSG +V++ G       GH +++  +F P  ++AL G+ 
Sbjct: 63  ALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIR 121

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
            KQ+  G +    +T+ G V + G N +GQLG GDT D   P+ I   E +  +  +AAG
Sbjct: 122 IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAG 180

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             +  AVT +G +Y +G G    LG G+++D L P  + +    G  +  V+ G  H ++
Sbjct: 181 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTS--AGGEKMSMVACGWRHTIS 238

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  SG +YT+G    G LGHGD  D  +P  L +L +    Q+    R T  L   G +Y
Sbjct: 239 VSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLY 298

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           G+GW  FG +G  +       ++ R  D  +   V Q+S G  HT+ VT+R  +F +G  
Sbjct: 299 GWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRG 355

Query: 459 ERAQLG 464
              QLG
Sbjct: 356 TNGQLG 361



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 7/257 (2%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78

Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DR   +  L P  + S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 197 GWGRYGNLGLGDR---NDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH  L   L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 6/259 (2%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G ++  G       G  D N  +  P  V +  G     V  G   T  ++ 
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVACGWRHTISVSY 241

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y +
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYGW 300

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  G
Sbjct: 301 GWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNG 358

Query: 355 ALGHGDEIDKTLPEPLSSL 373
            LG G+ +D+  P+ + +L
Sbjct: 359 QLGIGESVDRNFPKIIEAL 377



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G    + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-ERVTSAGGEKMSMVACGWRH 235

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 352

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LG GE  D   P+ I+     G
Sbjct: 353 GRGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 107 VETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V ++ G +M  +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S +
Sbjct: 218 VTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNS 276

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQ 221
            + Q+S    H   +   G+++  G N     G   + D   P+ + R  +  K V   Q
Sbjct: 277 FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---Q 332

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           V+ G   T  +T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 184/347 (53%), Gaps = 22/347 (6%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           SVFS G  + G LGHG +T   ++  +I     + +  ++A  NH+  + +SG V++ G 
Sbjct: 48  SVFSFGMGMYGKLGHG-DTANQLAPKKIE--GLSDIQAIAAGTNHSLALTKSGDVYSFGF 104

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
                 GH +T+  +  P+ +E L  +  + + AG   +  LT  G V++ G+ T G LG
Sbjct: 105 GLFGRLGHGNTDSQL-EPKKIEGLSDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 310
           HG+T D+ TPK I  L +V +   IAAG ++ LA+T +G VYSFG G    LGHG+   +
Sbjct: 161 HGNTEDQSTPKKIESLSDVQA---IAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQ 217

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
           L+P+ I+        +  ++AG  H +AL  SG VY++G G  G LGHGD  ++  P+ +
Sbjct: 218 LEPKKIEDLSD----IQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKI 273

Query: 371 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
             L    A  V A    +  L  +G VY FG    G LG    G +D  L P+ ++ L+ 
Sbjct: 274 EDLSDIQA--VAAGANHSLALTKSGEVYSFGRGNTGQLG---HGDTDDQLTPKKIEGLK- 327

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +  I+ G +H++ +T  G ++ FG N  + LGH      LEP +I
Sbjct: 328 -DIQAIAAGDFHSLALTKSGDVYSFG-NGTSGLGHGDTANQLEPKKI 372



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 173/342 (50%), Gaps = 29/342 (8%)

Query: 48  LYPQKFRSLVDLAASQLCALHSIYAGMSRNVQ---IELLNRC-NGNWKRVLRFLQSVEHS 103
           L P+K   L D+ A      HS+    S +V      L  R  +GN    L   + +E  
Sbjct: 69  LAPKKIEGLSDIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLE-PKKIEGL 127

Query: 104 SDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 162
           SDI          I  G +H+L ++ S  V+S G+   G LGHG    Q    T     S
Sbjct: 128 SDI--------QAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGNTEDQS---TPKKIES 175

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
            + V  ++A  NH+  + +SG V++ G       GH DT+  +  P+ +E L  +  + +
Sbjct: 176 LSDVQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQL-EPKKIEDLSDI--QAI 232

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            AG N +  LT  G V++ G   HGQLGHGDT ++ TPK I   E++  +  +AAG ++ 
Sbjct: 233 AAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKI---EDLSDIQAVAAGANHS 289

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           LA+T +G VYSFG G+   LGHG+  D+L P+ I+  +     +  ++AGD H +AL  S
Sbjct: 290 LALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLKD----IQAIAAGDFHSLALTKS 345

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
           G VY++G G  G LGHGD  ++  P+ +  L    A+   A 
Sbjct: 346 GDVYSFGNGTSG-LGHGDTANQLEPKKIEGLTDIQAIAAGAN 386



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 154/306 (50%), Gaps = 22/306 (7%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           SE +A  V     VF+ G       GH DT   +  P+ +E L  +  + + AG N +  
Sbjct: 40  SETNANLV----SVFSFGMGMYGKLGHGDTANQL-APKKIEGLSDI--QAIAAGTNHSLA 92

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT  G V++ G    G+LGHG+T  +  PK I  L ++ +   IAAG  + LA+T +G V
Sbjct: 93  LTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSDIQA---IAAGDFHSLALTKSGDV 149

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           YSFG+G++  LGHG   D+  P+ I++       V  ++AG  H +AL  SG VY++G G
Sbjct: 150 YSFGNGTS-GLGHGNTEDQSTPKKIESLSD----VQAIAAGGNHSLALTKSGDVYSFGFG 204

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LGHGD   +  P+ +  L    A+   A    +  L  +G VY FGW   G LG  
Sbjct: 205 LFGRLGHGDTDSQLEPKKIEDLSDIQAI--AAGGNHSLALTKSGDVYSFGWGLHGQLG-- 260

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
             G ++  L P+ ++ L    +  ++ G  H++ +T  G ++ FG     QLGH      
Sbjct: 261 -HGDTENQLTPKKIEDLS--DIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQ 317

Query: 472 LEPTEI 477
           L P +I
Sbjct: 318 LTPKKI 323


>gi|242076270|ref|XP_002448071.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
 gi|241939254|gb|EES12399.1| hypothetical protein SORBIDRAFT_06g020490 [Sorghum bicolor]
          Length = 529

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 148/486 (30%), Positives = 211/486 (43%), Gaps = 42/486 (8%)

Query: 9   SIEELP----SHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQL 64
           S++++P      L+  +L+S  L   DLA LE+  + F       P    SL +LAA   
Sbjct: 35  SLQQIPLTSNPSLLLHVLSSYGLEPKDLAALEVACQFFRRPAKFEPDATLSLPELAAYDT 94

Query: 65  CALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHT 124
           C   +I+  M +  +  L  RC G+WK VL +L   E      +     + ++  G  HT
Sbjct: 95  CCQKAIFKSMEQKEKDSLKQRCGGSWKLVLTYLLVGE------KNYHRGKSRVVAGPGHT 148

Query: 125 LLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 183
           + + S   V+S G++  G LG G    QC     I       + Q +        V  +G
Sbjct: 149 IAVTSKGDVYSFGANSSGQLGLGNTEEQCKP-CLIRSLQGIRITQAAVGSRRTMLVSDTG 207

Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            V+  G +     G          P++VE+LKG+   Q + G +F+  L+  G V+T   
Sbjct: 208 SVYVFGQD--IFAGLEFAGDYTSSPKVVESLKGIFVVQASVGGHFSAVLSREGQVYTFCW 265

Query: 244 NTHGQLG-HGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV---VYSFGSGS 298
               +LG H D  D  P   S+ P + +  V+QIAAG  Y+L +        VYS G G 
Sbjct: 266 GHDARLGHHSDPTDLEPRLLSVPPKDAL--VMQIAAGNCYLLMLVYQPTGMSVYSVGCGE 323

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG-KGYCGALG 357
              LGHG       PR IQ F+   +  V VSAG  H   L S G V+TWG     G LG
Sbjct: 324 GGKLGHGCTISLTIPRMIQQFKTLKVKPVSVSAGAFHCAVLASDGRVFTWGWDSDTGCLG 383

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           H D+ +   LP  ++ L S  A  +      TFV+ D G VY FG     +LG     V 
Sbjct: 384 HDDKQEYVVLPTAVAGLGSVKATYISTGYCSTFVVTDNGDVYSFGCDHSRNLGV-KADVG 442

Query: 417 DKVLRPRILDSLRA---HHVSQIS---------------TGLYHTVVVTDRGRLFGFGDN 458
           + V  P++  +L       V QIS               T   HT V+T+ GRL+  G  
Sbjct: 443 EDVRIPKLAANLNVSLNEKVVQISATNTWDWPSRSQNRITSECHTCVLTESGRLYSLGRG 502

Query: 459 ERAQLG 464
              QLG
Sbjct: 503 SEGQLG 508



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 4/147 (2%)

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
           RV AG  H +A+ S G VY++G    G LG G+  ++  P  + SL+     Q     R+
Sbjct: 140 RVVAGPGHTIAVTSKGDVYSFGANSSGQLGLGNTEEQCKPCLIRSLQGIRITQAAVGSRR 199

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T ++ DTGSVY FG   F  L F      D    P++++SL+   V Q S G + + V++
Sbjct: 200 TMLVSDTGSVYVFGQDIFAGLEF----AGDYTSSPKVVESLKGIFVVQASVGGHFSAVLS 255

Query: 448 DRGRLFGFGDNERAQLGHDTLRGCLEP 474
             G+++ F     A+LGH +    LEP
Sbjct: 256 REGQVYTFCWGHDARLGHHSDPTDLEP 282


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 176/353 (49%), Gaps = 26/353 (7%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H++ L+  + V S G    G LGHG +    +S T ++      VV V+   +H
Sbjct: 21  ISAGASHSVALLXGNVVCSWGRGEDGQLGHG-DAEDRLSPTYLSALDGHEVVSVTCGADH 79

Query: 176 AAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
                +S  QV++ G +             +F P+ ++AL G+  KQ+  G +    +T+
Sbjct: 80  TTAYSESFTQVYSWGCD-------------LFTPQPIKALHGLRIKQIACGDSHCLAVTM 126

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG G T D   P+ I   + V SV  +AAG  +  AVT +G +Y +
Sbjct: 127 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SVKMVAAGAEHTAAVTEDGELYGW 185

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G+++D L P  + T   +G+ +V+V+ G  H +++ SSG +YT+G    G
Sbjct: 186 GWGRYGNLGLGDRNDRLVPEKVSTV--EGVKMVKVACGWRHTISVSSSGGLYTYGWSKYG 243

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D   P  L +L+ +L  ++    R T  L   G +YG+GW  FG +     G
Sbjct: 244 QLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQV-----G 298

Query: 415 VSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           V D V    P  +       V  IS G  HT+ VT+R  +F +G     QLGH
Sbjct: 299 VGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGH 351



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 6/261 (2%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  V+A   
Sbjct: 113 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSVKMVAAGAE 171

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G+++  G       G  D N  +  P  V  ++GV   +V  G   T  ++ 
Sbjct: 172 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSTVEGVKMVKVACGWRHTISVSS 230

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++T G + +GQLGHGD  D  TP  +  L+E   + +I+ G  + +A+T +G +Y +
Sbjct: 231 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQE-NLISEISGGWRHTMALTSDGKLYGW 289

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      +G G+  D   P  ++    +   VV +S G  H +A+     V++WG+G  G
Sbjct: 290 GWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSWGRGTNG 347

Query: 355 ALGHGDEIDKTLPEPLSSLKS 375
            LGHG+ ID+ +P+ +  L +
Sbjct: 348 QLGHGESIDRNIPKMIEVLSA 368



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 122/257 (47%), Gaps = 19/257 (7%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           ++AG + +  L     V + G    GQLGHGD  DR +P  ++ L+    VV +  G  +
Sbjct: 21  ISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDG-HEVVSVTCGADH 79

Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             A + +   VYS+G             D   P+ I+     G+ + +++ GD H +A+ 
Sbjct: 80  TTAYSESFTQVYSWGC------------DLFTPQPIKALH--GLRIKQIACGDSHCLAVT 125

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G V +WG+   G LG G   D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 126 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGW 185

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DR   +  L P  + ++    + +++ G  HT+ V+  G L+ +G ++ 
Sbjct: 186 GWGRYGNLGLGDR---NDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKY 242

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH      L P ++
Sbjct: 243 GQLGHGDFEDHLTPHKL 259



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G    + V   +++      +V+V+    H
Sbjct: 166 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSTVEGVKMVKVACGWRH 224

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EAL+     +++ G   T  LT  
Sbjct: 225 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKLEALQENLISEISGGWRHTMALTSD 283

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G GD +D  +P  +  P E+   VV I+ G  + LAVT    V+S+
Sbjct: 284 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ--KVVHISCGWRHTLAVTERQNVFSW 341

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGHGESIDRNIPKMIEVLSADG 370



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 67/153 (43%), Gaps = 16/153 (10%)

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CAR 384
           V+ +SAG  H VAL     V +WG+G  G LGHGD  D+  P  LS+L  H  V V C  
Sbjct: 18  VLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGA 77

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              T        VY +G                 +  P+ + +L    + QI+ G  H +
Sbjct: 78  DHTTAYSESFTQVYSWG---------------CDLFTPQPIKALHGLRIKQIACGDSHCL 122

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            VT  G +  +G N+  QLG  T    L P +I
Sbjct: 123 AVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKI 155



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 4/167 (2%)

Query: 107 VETSAGNQM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V T  G +M ++  G  HT+ +S+S  +++ G S  G LGHG +    ++  ++      
Sbjct: 207 VSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHG-DFEDHLTPHKLEALQEN 265

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            + ++S    H   +   G+++  G N     G  D N     P  V+         ++ 
Sbjct: 266 LISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPHEQKVVHISC 324

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
           G   T  +T R +V + G  T+GQLGHG+++DR  PK I  L   GS
Sbjct: 325 GWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 371


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 181/370 (48%), Gaps = 10/370 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  H++ L++ + + S G    G LGHG    + V      F + A    +  +++ 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 136

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 137 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV-CVKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G    G 
Sbjct: 254 LGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV---GN 310

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           +D    P  +       +SQ++ G  HT+ ++++  +F +G     QLG+  +      T
Sbjct: 311 NDDHSSPGQVSFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEI--VDRNT 368

Query: 476 EIFIQEMEED 485
            + I  +  D
Sbjct: 369 PVLIDALSSD 378



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 154/300 (51%), Gaps = 8/300 (2%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVICG 73

Query: 226 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 132

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT  G V S+G   N  LG G   D L P+ IQ F  + + V  ++AG EH  A+   G 
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--ESVCVKMIAAGAEHTAAVTEDGD 190

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +Y WG G  G LG GD  D+ LPE +SS++    V V    R T  + D+G++Y +GW  
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 250

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +G LG  D    +  L P  +++L+   +SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 251 YGQLGHGDF---EDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 54/265 (20%)

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-- 321
           AP     +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F    
Sbjct: 7   APDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPA 66

Query: 322 -------------------------------------------------KGIHVVRVSAG 332
                                                            +G+ + +++ G
Sbjct: 67  ITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACG 126

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           D H +A+  +G V +WG+   G LG G   D  LP+ + + +S     + A    T  + 
Sbjct: 127 DSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVT 186

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
           + G +YG+GW  +G+LG  DR  +D++L P  + S+    +  ++ G  HT+ V+D G L
Sbjct: 187 EDGDLYGWGWGRYGNLGLGDR--NDRLL-PEKVSSVEGEKMVLVACGWRHTITVSDSGNL 243

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEI 477
           + +G ++  QLGH      L P ++
Sbjct: 244 YTYGWSKYGQLGHGDFEDHLVPHKV 268



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 6/261 (2%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I    +  V  ++A   
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFESVCVKMIAAGAE 180

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 181 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 239

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 240 SGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD-STISQISGGWRHTMALTSEGKLYGW 298

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      +G G   D   P  +     + I   +V+ G  H +AL     V++WG+G  G
Sbjct: 299 GWNKFGQVGVGNNDDHSSPGQVSFPEDQKIS--QVACGWRHTLALSEKKNVFSWGRGTSG 356

Query: 355 ALGHGDEIDKTLPEPLSSLKS 375
            LG+G+ +D+  P  + +L S
Sbjct: 357 QLGNGEIVDRNTPVLIDALSS 377



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 4/208 (1%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 233

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 234 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G ++  G N  GQ+G G+  D  +P  ++   E   + Q+A G  + LA++    V+S+G
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVS-FPEDQKISQVACGWRHTLALSEKKNVFSWG 351

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            G++  LG+GE  D   P  I      G
Sbjct: 352 RGTSGQLGNGEIVDRNTPVLIDALSSDG 379



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 7/161 (4%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT+ +S+S ++++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 227 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPH-KVEALKDSTISQISGGWRH 285

Query: 176 AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
              +   G+++  G N       G+ D +     P  V   +     QV  G   T  L+
Sbjct: 286 TMALTSEGKLYGWGWNKFGQVGVGNNDDHS---SPGQVSFPEDQKISQVACGWRHTLALS 342

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            + +V + G  T GQLG+G+ +DR TP  I  L   GS  +
Sbjct: 343 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSACK 383


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 79

Query: 176 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIRIKQIACGDSHCLAVTM 138

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 139 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 197

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 198 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 255

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 256 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 315

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 316 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 362



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 79

Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 137

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 138 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 197

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DR  +D+++  R+  S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 198 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 254

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH  L   L P ++
Sbjct: 255 GQLGHGDLEDHLIPHKL 271



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 125 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 183

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 184 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 241

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 242 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYG 300

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 301 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 358

Query: 354 GALGHGDEIDKTLPEPLSSL 373
           G LG G+ +D+  P+ + +L
Sbjct: 359 GQLGIGESVDRNFPKIIEAL 378



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 178 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 236

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 237 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 295

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 296 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 353

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LG GE  D   P+ I+     G
Sbjct: 354 GRGTNGQLGIGESVDRNFPKIIEALSVDG 382



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 107 VETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V ++ G +M  +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S +
Sbjct: 219 VTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNS 277

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQ 221
            + Q+S    H   +   G+++  G N     G   + D   P+ + R  +  K V   Q
Sbjct: 278 FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---Q 333

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           V+ G   T  +T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 334 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 386


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 176 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 243

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 304 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 7/241 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSFGS 296
           V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  + +A + +G+ VYS+G 
Sbjct: 25  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADHTVAYSQSGMEVYSWGW 83

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           G    LGHG   D   P  I+     GI + +++ GD H +A+   G V +WG+   G L
Sbjct: 84  GDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQL 141

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           G GD  D  +P+ + + +      V A    T  + + G +YG+GW  +G+LG  DR  +
Sbjct: 142 GLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR--T 199

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
           D+++ P  + S     +S ++ G  HT+ V+  G L+ +G ++  QLGH  L   L P +
Sbjct: 200 DRLV-PERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHK 258

Query: 477 I 477
           +
Sbjct: 259 L 259



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 171

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 172 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 229

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 230 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGWRHTMALTSDGKLYG 288

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 289 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 346

Query: 354 GALGHGDEIDKTLPEPLSSL 373
           G LG G+ +D+  P+ + +L
Sbjct: 347 GQLGIGESVDRNFPKIIEAL 366



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 65

Query: 386 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 66  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 122

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            VT  G +  +G N+  QLG       L P +I
Sbjct: 123 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 155



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 224

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 225 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 283

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 341

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LG GE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIEALSVDG 370



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 107 VETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V ++ G +M  +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S +
Sbjct: 207 VTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNS 265

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQ 221
            + Q+S    H   +   G+++  G N     G   + D   P+ + R  +  K V   Q
Sbjct: 266 FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---Q 321

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           V+ G   T  +T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 322 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 374


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 180/366 (49%), Gaps = 10/366 (2%)

Query: 101 EHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 159
           + ++D V       + I+ G  H++ L+S   V S G    G LGHG +     S T+++
Sbjct: 4   DMAADEVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS 62

Query: 160 FPSAAHVVQVSASENHAAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
                 +V V+   +H     QSG +V++ G       GH +++  +F P  ++AL G+ 
Sbjct: 63  ALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIR 121

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
            KQ+  G +    +T+ G V + G N +GQLG GDT D   P+ I   E +  +  +AAG
Sbjct: 122 IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAG 180

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             +  AVT +G +Y +G G    LG G++ D L P  + +    G  +  V+ G  H ++
Sbjct: 181 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTIS 238

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  SG +YT+G    G LGHGD  D  +P  L +L +    Q+    R T  L   G +Y
Sbjct: 239 VSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLY 298

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           G+GW  FG +G  +       ++ R  D  +   V Q+S G  HT+ VT+R  +F +G  
Sbjct: 299 GWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRG 355

Query: 459 ERAQLG 464
              QLG
Sbjct: 356 TNGQLG 361



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78

Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DR  +D+++  R+  S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 197 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH  L   L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 240

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 241 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYG 299

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 300 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357

Query: 354 GALGHGDEIDKTLPEPLSSL 373
           G LG G+ +D+  P+ + +L
Sbjct: 358 GQLGIGESVDRNFPKIIEAL 377



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G ++  G N  GQ+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 107 VETSAGNQMQITT-GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V ++ G +M +   G  HT+ +S S ++++ G S  G LGHG      +   ++   S +
Sbjct: 218 VTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNS 276

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQ 221
            + Q+S    H   +   G+++  G N     G   + D   P+ + R  +  K V   Q
Sbjct: 277 FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---Q 332

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           V+ G   T  +T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 156/302 (51%), Gaps = 10/302 (3%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT 223
            V+ +SA  +H+  +L    V + G       GH D  +RP   P  +  L G+    +T
Sbjct: 19  QVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPT--PTQLSTLDGLDIISIT 76

Query: 224 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G + T  +   R  V++ G    G+LGHG++ D  TP+ I  L  +  + QIA G S+ 
Sbjct: 77  CGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSL-KIRQIACGDSHC 135

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           LAVT +G V S+G   N  LG G   D L P+ IQ F  +G+ +  V+AG EH  A+   
Sbjct: 136 LAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF--QGVSIKMVAAGAEHTAAVTED 193

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G +Y WG G  G LG GD  D+ +PE +S +     + V    R T  +  +G +Y +GW
Sbjct: 194 GELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGW 253

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
             +G LG  D    +  L P  +++LR  ++S IS G  HT+ +T  G L+G+G N+  Q
Sbjct: 254 SKYGQLGHGDF---EDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQ 310

Query: 463 LG 464
           +G
Sbjct: 311 VG 312



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 177/356 (49%), Gaps = 18/356 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVS 170
           I+ G  H++ L+S + V S G    G LGHG     P  TQ  +   ++      ++ ++
Sbjct: 23  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLD------IISIT 76

Query: 171 ASENHAAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
              +H     +S  +V++ G       GH +++  +F P+ ++AL  +  +Q+  G +  
Sbjct: 77  CGADHTTSYSESRMEVYSWGWGDFGRLGHGNSS-DLFTPQPIKALHSLKIRQIACGDSHC 135

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             +T+ G V + G N +GQLG G T D   P+ I   + V S+  +AAG  +  AVT +G
Sbjct: 136 LAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-SIKMVAAGAEHTAAVTEDG 194

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            +Y +G G    LG G+++D L P  +      G  ++ V+ G  H +++ SSG +YT+G
Sbjct: 195 ELYGWGWGRYGNLGLGDRNDRLVPEKVSLV--NGDKMIMVACGWRHTISVSSSGGLYTYG 252

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               G LGHGD  D   P  + +L+      +    R T  L   G++YG+GW  FG +G
Sbjct: 253 WSKYGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVG 312

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             D       ++ +     +AH + QIS G  HT+ +T+R  +F +G     QLGH
Sbjct: 313 VGDNIDHCSPVQVKFPHE-QAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGH 367



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 130/264 (49%), Gaps = 10/264 (3%)

Query: 218 PCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           P +QV   +AG + +  L     V + G    GQLGHGD  DRPTP  ++ L+ +  ++ 
Sbjct: 16  PIRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGL-DIIS 74

Query: 275 IAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
           I  G  +  + + + + VYS+G G    LGHG   D   P+ I+      + + +++ GD
Sbjct: 75  ITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHS--LKIRQIACGD 132

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
            H +A+   G V +WG+   G LG G   D  +P+ + + +      V A    T  + +
Sbjct: 133 SHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTE 192

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            G +YG+GW  +G+LG  DR   +  L P  +  +    +  ++ G  HT+ V+  G L+
Sbjct: 193 DGELYGWGWGRYGNLGLGDR---NDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLY 249

Query: 454 GFGDNERAQLGHDTLRGCLEPTEI 477
            +G ++  QLGH      L P ++
Sbjct: 250 TYGWSKYGQLGHGDFEDHLTPHKV 273



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 122/261 (46%), Gaps = 4/261 (1%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       +  V+A   
Sbjct: 127 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFQGVSIKMVAAGAE 185

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G+++  G       G  D N  +  P  V  + G     V  G   T  ++ 
Sbjct: 186 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLV-PEKVSLVNGDKMIMVACGWRHTISVSS 244

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++T G + +GQLGHGD  D  TP  +  L +   +  I+ G  + +A+T +G +Y +
Sbjct: 245 SGGLYTYGWSKYGQLGHGDFEDHLTPHKVEALRD-SYISMISGGWRHTMALTSDGNLYGW 303

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      +G G+  D   P  ++    +   +V++S G  H +A+     V++WG+G  G
Sbjct: 304 GWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNG 363

Query: 355 ALGHGDEIDKTLPEPLSSLKS 375
            LGHG+ +D+ LP+ +  L +
Sbjct: 364 QLGHGESMDRNLPKIIEVLSA 384



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 4/209 (1%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G    + V   +++  +   ++ V+    H
Sbjct: 180 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVP-EKVSLVNGDKMIMVACGWRH 238

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  VEAL+      ++ G   T  LT  
Sbjct: 239 TISVSSSGGLYTYGWSKYGQLGHGDFEDHL-TPHKVEALRDSYISMISGGWRHTMALTSD 297

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G+++  G N  GQ+G GD +D  +P  +  P E+  S+VQI+ G  + LA+T    V+S+
Sbjct: 298 GNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSW 357

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LGHGE  D   P+ I+     G
Sbjct: 358 GRGTNGQLGHGESMDRNLPKIIEVLSADG 386


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 173/350 (49%), Gaps = 8/350 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  H++ L++ + + + G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            A+     QV++ G       GH ++   +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTD-VFTPQPVKALQGIKIKQLACGDSHCLAVTMA 137

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V + G N +GQLG G T D   P++I   E + SV  IAAG  +  AVT +G +Y +G
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGI-SVKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G    LG G+++D   P  + +   +G  +V V+ G  H + + SSG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSV--EGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G  D   
Sbjct: 255 LGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNA- 313

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
                 P  ++      V+Q++ G  HT+  T++  +F +G     QLGH
Sbjct: 314 --DHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGH 361



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 160/320 (50%), Gaps = 8/320 (2%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV VSA  +H+  +L    + T G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV-PTVISGFDAPGITSVICG 74

Query: 226 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            + T   +   H V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLA 133

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 134 VTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAF--EGISVKMIAAGAEHTAAVTEDGD 191

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +Y WG G  G LG GD  D+ +PE +SS++    V V    R T  +  +GS+Y +GW  
Sbjct: 192 IYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +G LG  D    +  L P  +++L+    SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 252 YGQLGHGDF---EDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG 308

Query: 465 HDTLRGCLEPTEIFIQEMEE 484
                    P ++   E ++
Sbjct: 309 AGDNADHCSPAQVNFPEEQK 328



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 6/259 (2%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  H L ++ +  V S G +  G LG G      +  T   F   + V  ++A   
Sbjct: 123 QLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS-VKMIAAGAE 181

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G ++  G       G  D N   F P  V +++G     V  G   T  ++ 
Sbjct: 182 HTAAVTEDGDIYGWGWGRYGNLGLGDRNDR-FVPEKVSSVEGDKMVLVACGWRHTITVSS 240

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++T G + +GQLGHGD  D   P  +  L++  S  QI+ G  + +A+T +G +Y +
Sbjct: 241 SGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD-SSTSQISGGWRHTMALTSDGKLYGW 299

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      +G G+  D   P  +     +   V +V+ G  H +A      V+ WG+G  G
Sbjct: 300 GWNKFGQVGAGDNADHCSPAQVNFPEEQ--KVAQVACGWRHTLAFTEKKNVFAWGRGTSG 357

Query: 355 ALGHGDEIDKTLPEPLSSL 373
            LGHG+ +D+  P  + +L
Sbjct: 358 QLGHGEIVDRNTPVIIDAL 376



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 54/258 (20%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR--------- 321
           +VV ++AG S+ +A+    V+ ++G G +  LGHG+  D L P  I  F           
Sbjct: 15  AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICG 74

Query: 322 ------------------------------------------KGIHVVRVSAGDEHVVAL 339
                                                     +GI + +++ GD H +A+
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAV 134

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
             +G V +WG+   G LG G   D  LP+ + + +      + A    T  + + G +YG
Sbjct: 135 TMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYG 194

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++
Sbjct: 195 WGWGRYGNLGLGDR--NDRFV-PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 460 RAQLGHDTLRGCLEPTEI 477
             QLGH      L P ++
Sbjct: 252 YGQLGHGDFEDHLVPHKV 269



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVP-EKVSSVEGDKMVLVACGWRH 234

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 235 TITVSSSGSLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSSTSQISGGWRHTMALTSD 293

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G ++  G N  GQ+G GD  D  +P  +   EE   V Q+A G  + LA T    V+++G
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQ-KVAQVACGWRHTLAFTEKKNVFAWG 352

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            G++  LGHGE  D   P  I      G
Sbjct: 353 RGTSGQLGHGEIVDRNTPVIIDALSPDG 380



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 4/166 (2%)

Query: 107 VETSAGNQMQITT-GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V +  G++M +   G  HT+ +S+S S+++ G S  G LGHG      V   ++     +
Sbjct: 217 VSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPH-KVEALKDS 275

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
              Q+S    H   +   G+++  G N     G  D N     P  V   +     QV  
Sbjct: 276 STSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD-NADHCSPAQVNFPEEQKVAQVAC 334

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           G   T   T + +V   G  T GQLGHG+ +DR TP  I  L   G
Sbjct: 335 GWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDG 380


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 174/350 (49%), Gaps = 8/350 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  H++ L++ + + S G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHT 78

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 137

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 138 GQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGV-CVKMIAAGAEHTAAVTEDGDLYGWG 196

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 254

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LGHGD  D  +P  L +LK     Q+    R T  L   G +YG+GW  FG +G    G 
Sbjct: 255 LGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV---GN 311

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           +D    P  +       +SQ++ G  HT+ ++++  +F +G     QLG+
Sbjct: 312 NDDHCSPVQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGN 361



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 161/320 (50%), Gaps = 8/320 (2%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPGITSVICG 74

Query: 226 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 75  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 133

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT  G V S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+   G 
Sbjct: 134 VTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--EGVCVKMIAAGAEHTAAVTEDGD 191

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +Y WG G  G LG GD  D+ LPE +SS++    V V    R T  + D+G++Y +GW  
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 251

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +G LG  D    +  L P  L++L+   +SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 252 YGQLGHGDF---EDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 308

Query: 465 HDTLRGCLEPTEIFIQEMEE 484
                    P ++   E ++
Sbjct: 309 VGNNDDHCSPVQVHFPEDQK 328



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 54/258 (20%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI------ 324
           +VV ++AG S+ +A+    V+ S+G G +  LGHG+  D L P  +  F   GI      
Sbjct: 15  TVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICG 74

Query: 325 ---------------------------------------------HVVRVSAGDEHVVAL 339
                                                         + +++ GD H +A+
Sbjct: 75  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAV 134

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
             +G V +WG+   G LG G   D  LP+ + + +      + A    T  + + G +YG
Sbjct: 135 TMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYG 194

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +GW  +G+LG  DR  +D++L P  + S+    +  ++ G  HT+ V+D G L+ +G ++
Sbjct: 195 WGWGRYGNLGLGDR--NDRLL-PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 251

Query: 460 RAQLGHDTLRGCLEPTEI 477
             QLGH      L P ++
Sbjct: 252 YGQLGHGDFEDHLVPHKL 269



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 6/261 (2%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 123 QIACGDSHCLAVTMAGQVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFEGVCVKMIAAGAE 181

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G ++  G       G  D N  +  P  V +++G     V  G   T  ++ 
Sbjct: 182 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLL-PEKVSSVEGEKMVLVACGWRHTITVSD 240

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G+++T G + +GQLGHGD  D   P  +  L++  ++ QI+ G  + +A+T  G +Y +
Sbjct: 241 SGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKD-STISQISGGWRHTMALTSEGKLYGW 299

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      +G G   D   P  +Q    +   + +V+ G  H +AL     V++WG+G  G
Sbjct: 300 GWNKFGQVGVGNNDDHCSP--VQVHFPEDQKISQVACGWRHTLALSEKKNVFSWGRGTSG 357

Query: 355 ALGHGDEIDKTLPEPLSSLKS 375
            LG+G+ +D+  P  + +L +
Sbjct: 358 QLGNGEIVDRNTPVLIDALST 378



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 4/208 (1%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 176 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 234

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EALK     Q++ G   T  LT  
Sbjct: 235 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDSTISQISGGWRHTMALTSE 293

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G ++  G N  GQ+G G+  D  +P  +    E   + Q+A G  + LA++    V+S+G
Sbjct: 294 GKLYGWGWNKFGQVGVGNNDDHCSPVQVH-FPEDQKISQVACGWRHTLALSEKKNVFSWG 352

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            G++  LG+GE  D   P  I      G
Sbjct: 353 RGTSGQLGNGEIVDRNTPVLIDALSTDG 380



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT+ +S+S ++++ G S  G LGHG      V   ++     + + Q+S    H
Sbjct: 228 VACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPH-KLEALKDSTISQISGGWRH 286

Query: 176 AAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
              +   G+++  G N       G+ D +    +    E  K     QV  G   T  L+
Sbjct: 287 TMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQK---ISQVACGWRHTLALS 343

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
            + +V + G  T GQLG+G+ +DR TP  I  L   GS
Sbjct: 344 EKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTDGS 381


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 67

Query: 176 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 127 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 185

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G++ D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 186 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 243

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 244 QLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNL 303

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 304 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 350



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 7/241 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSFGS 296
           V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  + +A + +G+ VYS+G 
Sbjct: 25  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADHTVAYSQSGMEVYSWGW 83

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           G    LGHG   D   P  I+     GI + +++ GD H +A+   G V +WG+   G L
Sbjct: 84  GDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQL 141

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           G GD  D  +P+ + + +      V A    T  + + G +YG+GW  +G+LG  DR  +
Sbjct: 142 GLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR--T 199

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
           D+++  R+  S     +S ++ G  HT+ V+  G L+ +G ++  QLGH  L   L P +
Sbjct: 200 DRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHK 258

Query: 477 I 477
           +
Sbjct: 259 L 259



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 113 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 171

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 172 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 229

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  + +A+T +G +Y 
Sbjct: 230 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGFRHTMALTSDGKLYG 288

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 289 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 346

Query: 354 GALGHGDEIDKTLPEPLSSL 373
           G LG G+ +D+  P+ + +L
Sbjct: 347 GQLGIGESVDRNFPKIIEAL 366



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 6   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 65

Query: 386 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 66  DHTVAYSQSGMEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 122

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            VT  G +  +G N+  QLG       L P +I
Sbjct: 123 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 155



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 224

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 225 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGFRHTMALTSD 283

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 341

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LG GE  D   P+ I+     G
Sbjct: 342 GRGTNGQLGIGESVDRNFPKIIEALSVDG 370



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 10/165 (6%)

Query: 107 VETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V ++ G +M  +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S +
Sbjct: 207 VTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNS 265

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQ 221
            + Q+S    H   +   G+++  G N     G   + D   P+ + R  +  K V   Q
Sbjct: 266 FISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---Q 321

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           V+ G   T  +T R +V   G  T+GQLG G+++DR  PK I  L
Sbjct: 322 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 366


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 180/366 (49%), Gaps = 10/366 (2%)

Query: 101 EHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 159
           + ++D V       + I+ G  H++ L+S   V S G    G LGHG +     S T+++
Sbjct: 4   DMAADEVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS 62

Query: 160 FPSAAHVVQVSASENHAAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
                 +V V+   +H     QSG +V++ G       GH +++  +F P  ++AL G+ 
Sbjct: 63  ALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIR 121

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
            KQ+  G +    +T+ G V + G N +GQLG GDT D   P+ I   E +  +  +AAG
Sbjct: 122 IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-PIKMVAAG 180

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             +  AVT +G +Y +G G    LG G++ D L P  + +    G  +  V+ G  H ++
Sbjct: 181 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTIS 238

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  SG +YT+G    G LGHGD  D  +P  L +L +    Q+    R T  L   G +Y
Sbjct: 239 VSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLY 298

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           G+GW  FG +G  +       ++ R  D  +   V Q+S G  HT+ VT+R  +F +G  
Sbjct: 299 GWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRG 355

Query: 459 ERAQLG 464
              QLG
Sbjct: 356 TNGQLG 361



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           ++AG + +  L     V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  +
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78

Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            +A + +G+ VYS+G G    LGHG   D   P  I+     GI + +++ GD H +A+ 
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G V +WG+   G LG GD  D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DR  +D+++  R+  S     +S ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 197 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH  L   L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 131/311 (42%), Gaps = 55/311 (17%)

Query: 115 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
           + +T G  HT+  S S   V+S G    G LGHG  ++   +   I       + Q++  
Sbjct: 70  VSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHG-NSSDLFTPLPIKALHGIRIKQIACG 128

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           ++H   V   G+V + G N +   G  DT   +  P+ ++A +G+P K V AG   T  +
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLV-PQKIQAFEGIPIKMVAAGAEHTAAV 187

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G ++  G   +G LG GD  DR  P+ +        +  +A G  + ++V+ +G +Y
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE-KMSMVACGWRHTISVSYSGALY 246

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQT--------------------------------FR 320
           ++G      LGHG+  D L P  ++                                 F 
Sbjct: 247 TYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFG 306

Query: 321 RKGI------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           + G+                   VV+VS G  H +A+     V+ WG+G  G LG G+ +
Sbjct: 307 QVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESV 366

Query: 363 DKTLPEPLSSL 373
           D+  P+ + +L
Sbjct: 367 DRNFPKIIEAL 377



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G ++  G N  GQ+G G+ LD+ +P  +    +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 107 VETSAGNQMQITT-GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V ++ G +M +   G  HT+ +S S ++++ G S  G LGHG      +   ++   S +
Sbjct: 218 VTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNS 276

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQ 221
            + Q+S    H   +   G+++  G N     G   + D   P+ + R  +  K V   Q
Sbjct: 277 FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---Q 332

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           V+ G   T  +T R +V   G  T+GQLG G+++DR  PK I  L   G+  Q
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/321 (34%), Positives = 162/321 (50%), Gaps = 11/321 (3%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQV 222
           + V+ +SA  +H   +L    V + G       GH DT+ RP+  P  + AL       +
Sbjct: 14  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL--PTQLSALDAQHIDSI 71

Query: 223 TAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
             G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+
Sbjct: 72  ACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSH 130

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            LAVT  G V S+G   N  LG G   D L P+ IQ F  KG+ +  V+AG EH VA+  
Sbjct: 131 CLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAF--KGVPIKMVAAGAEHSVAITE 188

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +G +Y WG G  G LG GD  D+  PE +SS+     V V    R T  +  +G +Y +G
Sbjct: 189 NGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYG 248

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
           W  +G LG    G  +  L P+ L +L    +SQ+S G  H++ +T  G LFG+G N+  
Sbjct: 249 WSKYGQLG---HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFG 305

Query: 462 QLG-HDTLRGCLEPTEIFIQE 481
           Q+G  D L  C      F Q+
Sbjct: 306 QVGVGDNLDHCSPVQVKFPQD 326



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 182/355 (51%), Gaps = 11/355 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  HT+ L+S + V S G    G LGHG +T      T+++   A H+  ++   +H
Sbjct: 19  ISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRPLPTQLSALDAQHIDSIACGADH 77

Query: 176 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
             A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +T+
Sbjct: 78  TLAYSESRNELYSWGWGDFGRLGHGNSSD-LLIPQPIIALQGLRIKQIACGDSHCLAVTM 136

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG G+T D   P+ I   + V  +  +AAG  + +A+T NG +Y +
Sbjct: 137 EGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGV-PIKMVAAGAEHSVAITENGELYGW 195

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G+++D   P  + +       +V V+ G  H +++ SSG +YT+G    G
Sbjct: 196 GWGRYGNLGLGDRNDRWNPEKVSSVDCD--KMVMVACGWRHTISVSSSGGIYTYGWSKYG 253

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHG+  D  +P+ L +L   L  QV    R +  L  TG ++G+GW  FG +G  D  
Sbjct: 254 QLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGD-- 311

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTL 468
            +     P  +   +   V QIS G  HT+ VT++  +F +G     QLGH DT+
Sbjct: 312 -NLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTI 365



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 153/328 (46%), Gaps = 9/328 (2%)

Query: 117 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 129

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   V   G+V + G N +   G  +T   +  P+ ++A KGVP K V AG   +  +T 
Sbjct: 130 HCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLV-PQKIQAFKGVPIKMVAAGAEHSVAITE 188

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+ +G +Y++
Sbjct: 189 NGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVD-CDKMVMVACGWRHTISVSSSGGIYTY 247

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G ++ WG    G
Sbjct: 248 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLLFGWGWNKFG 305

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-- 412
            +G GD +D   P  +   +    VQ+    R T  + +  +V+ +G    G LG  D  
Sbjct: 306 QVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTI 365

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGL 440
              S K++    +D     H+   +T L
Sbjct: 366 DRNSPKIIEALSVDGSAGPHIESSNTDL 393


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 177/352 (50%), Gaps = 15/352 (4%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H++ LIS + V S G    G LGHG +T   +  T+++   A  +V V    +H
Sbjct: 20  ISAGGSHSVALISGNVVCSWGRGEDGQLGHG-DTDDRLLPTQLSALDAQQIVSVVCGADH 78

Query: 176 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
             A+     +V++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T+
Sbjct: 79  TLAYSESKVEVYSWGWGDFGRLGHGNSSD-LFIPQPIRALQGLRIKQIACGDSHCLAVTM 137

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG G T D   P+ I   + V  +  +AAG  + +A+T NG +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELYGW 196

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G+++D   P  +     K   +V V+ G  H +++ SSG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRNDRCIPEKVSVDCDK---MVLVACGWRHTISVSSSGELYTYGWSKYG 253

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D  +P  L +    L  QV    R T  L   G +YG+GW  FG +     G
Sbjct: 254 QLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQV-----G 308

Query: 415 VSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           V D V R  P  +       V+QIS G  HT+ VT++  ++ +G     QLG
Sbjct: 309 VGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLG 360



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 157/315 (49%), Gaps = 9/315 (2%)

Query: 151 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 210
           Q V  T  + P    V+ +SA  +H+  ++    V + G       GH DT+  +  P  
Sbjct: 2   QEVEATTASPPPPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLL-PTQ 60

Query: 211 VEALKGVPCKQVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           + AL       V  G + T  +   +  V++ G    G+LGHG++ D   P+ I  L+ +
Sbjct: 61  LSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGL 120

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
             + QIA G S+ LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V
Sbjct: 121 -RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTF--QGVPIKMV 177

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           +AG EH VA+  +G +Y WG G  G LG GD  D+ +PE +S     + +  C   R T 
Sbjct: 178 AAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGW-RHTI 236

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            +  +G +Y +GW  +G LG  D       L P  L +     + Q+S G  HT+ +T  
Sbjct: 237 SVSSSGELYTYGWSKYGQLGHGD---CKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTG 293

Query: 450 GRLFGFGDNERAQLG 464
           G+L+G+G N+  Q+G
Sbjct: 294 GQLYGWGWNKFGQVG 308



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 149/323 (46%), Gaps = 25/323 (7%)

Query: 115 MQITTGRYHTLLISNSSV--FSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAH 165
           + +  G  HTL  S S V  +S G    G LGHG       P+  + +   RI       
Sbjct: 70  VSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIK------ 123

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
             Q++  ++H   V   G+V + G N +   G   T   +  P+ ++  +GVP K V AG
Sbjct: 124 --QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQTFQGVPIKMVAAG 180

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              +  +T  G ++  G   +G LG GD  DR  P+ ++   +   +V +A G  + ++V
Sbjct: 181 AEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSV--DCDKMVLVACGWRHTISV 238

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           + +G +Y++G      LGHG+  D L P  +Q F  K I   +VS G  H +AL + G +
Sbjct: 239 SSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLI--CQVSGGWRHTMALTTGGQL 296

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           Y WG    G +G GD +D+  P  +         Q+    R T  + +  +VY +G    
Sbjct: 297 YGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTN 356

Query: 406 GSLGFPDRGVSDKVLRPRILDSL 428
           G LG  D   +     P+I+++L
Sbjct: 357 GQLGIGD---TIDWNYPKIIEAL 376



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 4/153 (2%)

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+ LP  LS+L +   V V    
Sbjct: 17  VLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGA 76

Query: 386 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             T    ++   VY +GW  FG LG    G S  +  P+ + +L+   + QI+ G  H +
Sbjct: 77  DHTLAYSESKVEVYSWGWGDFGRLG---HGNSSDLFIPQPIRALQGLRIKQIACGDSHCL 133

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            VT  G +  +G N+  QLG  T    L P +I
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKI 166



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 7/209 (3%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H++ I+ N  ++  G    G LG G    +C+   +++      +V V+    H
Sbjct: 177 VAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIP-EKVSV-DCDKMVLVACGWRH 234

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG+++T G +     GH D    +  P  ++A       QV+ G   T  LT  
Sbjct: 235 TISVSSSGELYTYGWSKYGQLGHGDCKDHLV-PHKLQAFSDKLICQVSGGWRHTMALTTG 293

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G GD +DR +P  +  P ++   V QI+ G  + +AVT    VYS+
Sbjct: 294 GQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQ--KVAQISCGWRHTIAVTEKDNVYSW 351

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LG G+  D   P+ I+     G
Sbjct: 352 GRGTNGQLGIGDTIDWNYPKIIEALSVDG 380



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 3/159 (1%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT+ +S+S  +++ G S  G LGHG      V      F S   + QVS    H
Sbjct: 228 VACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAF-SDKLICQVSGGWRH 286

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              +   GQ++  G N     G  D N     P  V+        Q++ G   T  +T +
Sbjct: 287 TMALTTGGQLYGWGWNKFGQVGVGD-NVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEK 345

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            +V++ G  T+GQLG GDT+D   PK I  L   GS  Q
Sbjct: 346 DNVYSWGRGTNGQLGIGDTIDWNYPKIIEALSVDGSCGQ 384


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 168/315 (53%), Gaps = 12/315 (3%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 224
           V+ +SA  NH+A +L    V + G       GH D+ +RP+  P ++ +        V  
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 225 GLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
           G + T  +      +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCL 139

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            VT NG V+S+G   N  LG G   D L P+ I+ F  +G+ V  ++AG EH  A+   G
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKMIAAGAEHTTAITEGG 197

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            +Y WG G  G LG  D  D+++PE +SS++    V V    R +  +  +G++Y +GW 
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWS 257

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
            +G LG  D    D ++ PR L++L+   +SQIS G  HT+ V + G+L+G+G N+  Q+
Sbjct: 258 KYGQLGHGD--FQDHLV-PRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 464 G-HDTLRGCLEPTEI 477
           G  D +  C  P E+
Sbjct: 315 GVEDNVDHC-SPVEV 328



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 171/354 (48%), Gaps = 16/354 (4%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 173
           I+ G  H+  L+S   V S G    G LGHG    + V    T  + P    V+    ++
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI--CGAD 83

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +  A+     Q+++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-VFNPQPIVALQGMKIKQIACGDSHCLTVT 142

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G VH+ G N +GQLG G+  D   P+ I   E V  V  IAAG  +  A+T  G +Y 
Sbjct: 143 FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV-CVKMIAAGAEHTTAITEGGDLYG 201

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G G    LG  ++ D   P  + +   +G  +V V+ G  H V++ SSG +YT+G    
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSV--EGEKMVLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LGHGD  D  +P  L +LK     Q+    R T  + + G +YG+GW  FG +     
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV----- 314

Query: 414 GVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           GV D V    P  ++      + Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGH 368



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 57/334 (17%)

Query: 117 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +  G  HT+  S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 78  VICGADHTIAYSDDEMQLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   V  +GQV + G N +   G    N+    P+ ++A +GV  K + AG   T  +T 
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLG-LGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE 195

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++  G   +G LG  D  DR  P+ ++ +E    +V +A G  + ++V+ +G +Y++
Sbjct: 196 GGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGE-KMVLVACGWRHSVSVSSSGALYTY 254

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI------------------------------ 324
           G      LGHG+  D L PR ++  +   I                              
Sbjct: 255 GWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 325 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
                                +V+V+ G  H +AL  +  +++WG+G  G LGHG+ ID+
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDR 374

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
             P+ + +L   L    C +   + V+  T  V+
Sbjct: 375 NTPKMIDALS--LDGSACKQLESSNVVPMTVKVW 406



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 6/195 (3%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           SV+ I+AG ++  A+    +V S+G G +  LGHG+  D   P  + +F      V  V 
Sbjct: 22  SVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVP--RVTSVI 79

Query: 331 AGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
            G +H +A  D    +Y+WG G  G LGHG+  D   P+P+ +L+     Q+        
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCL 139

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            +   G V+ +G    G LG    G +   L P+ + +     V  I+ G  HT  +T+ 
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGL---GNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEG 196

Query: 450 GRLFGFGDNERAQLG 464
           G L+G+G      LG
Sbjct: 197 GDLYGWGWGRYGNLG 211


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 177/350 (50%), Gaps = 10/350 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H++ L+S   V S G    G LGHG +    +S T+++      +V V+   +H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRLSPTQLSALDDHQIVSVTCGADH 78

Query: 176 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
             A+     +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T+
Sbjct: 79  TVAYSESRMEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 138 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAGAEHTAAVTEDGDLYGW 196

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G+++D L P  + +    G  +  V+ G  H +++  SG +YT+G    G
Sbjct: 197 GWGRYGNLGLGDRNDRLVPERVTSA--GGEKMSMVACGWRHTISVSYSGALYTYGWSKYG 254

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D  +P  L +L + +  Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 255 QLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL 314

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                ++ RI D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 315 DQCSPVQVRIPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 361



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/326 (33%), Positives = 163/326 (50%), Gaps = 10/326 (3%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
           P    V+ +SA  +H+  +L    V + G       GH D    +  P  + AL      
Sbjct: 12  PPPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRL-SPTQLSALDDHQIV 70

Query: 221 QVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            VT G + T  +   R  V++ G    G+LGHG++ D  TP  I  L  +  + QIA G 
Sbjct: 71  SVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI-RIKQIACGD 129

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           S+ LAVT  G V S+G   N  LG G+  D L P+ IQ F  +GI +  V+AG EH  A+
Sbjct: 130 SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF--EGIRIKMVAAGAEHTAAV 187

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
              G +Y WG G  G LG GD  D+ +PE ++S        V    R T  +  +G++Y 
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +GW  +G LG  D    +  L P  L++L    +SQIS G  HT+ +T  G+L+G+G N+
Sbjct: 248 YGWSKYGQLGHGDL---EDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNK 304

Query: 460 RAQLG-HDTLRGCLEPTEIFIQEMEE 484
             Q+G  + L  C  P ++ I + ++
Sbjct: 305 FGQVGVGNNLDQC-SPVQVRIPDDQK 329



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 10/261 (3%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G ++  G       G  D N  +  P  V +  G     V  G   T  ++ 
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLV-PERVTSAGGEKMSMVACGWRHTISVSY 241

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAVTGNGVVY 292
            G ++T G + +GQLGHGD  D   P     LE +G+ V  QI+ G  + +A+T +G +Y
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLVPHK---LEALGNSVISQISGGWRHTMALTSDGKLY 298

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G 
Sbjct: 299 GWGWNKFGQVGVGNNLDQCSP--VQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGT 356

Query: 353 CGALGHGDEIDKTLPEPLSSL 373
            G LG G+ +D+  P+ + +L
Sbjct: 357 NGQLGIGESLDRNFPKIIEAL 377



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G    + V   R+       +  V+    H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVP-ERVTSAGGEKMSMVACGWRH 235

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLV-PHKLEALGNSVISQISGGWRHTMALTSD 294

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G ++  G N  GQ+G G+ LD+ +P  +  + +   VVQ++ G  + LAVT    V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-IPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            G+N  LG GE  D   P+ I+     G
Sbjct: 354 RGTNGQLGIGESLDRNFPKIIEALSVDG 381



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 107 VETSAGNQMQITT-GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V ++ G +M +   G  HT+ +S S ++++ G S  G LGHG      V   ++     +
Sbjct: 218 VTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPH-KLEALGNS 276

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQ 221
            + Q+S    H   +   G+++  G N     G   + D   P+ + R+ +  K V   Q
Sbjct: 277 VISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRIPDDQKVV---Q 332

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           V+ G   T  +T R +V   G  T+GQLG G++LDR  PK I  L   G+  Q
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALSVDGASGQ 385


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 168/315 (53%), Gaps = 12/315 (3%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTA 224
           V+ +SA  NH+A +L    V + G       GH D+ +RP+  P ++ +        V  
Sbjct: 23  VILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPV--PTVLTSFDVPRVTSVIC 80

Query: 225 GLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
           G + T  +      +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ L
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM-KIKQIACGDSHCL 139

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            VT NG V+S+G   N  LG G   D L P+ I+ F  +G+ V  ++AG EH  A+   G
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAF--EGVCVKMIAAGAEHTTAITEGG 197

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            +Y WG G  G LG  D  D+++PE +SS++    V V    R +  +  +G++Y +GW 
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWS 257

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
            +G LG  D    D ++ PR L++L+   +SQIS G  HT+ V + G+L+G+G N+  Q+
Sbjct: 258 KYGQLGHGD--FQDHLV-PRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 464 G-HDTLRGCLEPTEI 477
           G  D +  C  P E+
Sbjct: 315 GVEDNVDHC-SPVEV 328



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 171/354 (48%), Gaps = 16/354 (4%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASE 173
           I+ G  H+  L+S   V S G    G LGHG    + V    T  + P    V+    ++
Sbjct: 26  ISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI--CGAD 83

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +  A+     Q+++ G       GH +++  +F P+ + AL+G+  KQ+  G +    +T
Sbjct: 84  HTIAYSDDEMQLYSWGWGDFGRLGHGNSSD-VFNPQPIVALQGMKIKQIACGDSHCLTVT 142

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G VH+ G N +GQLG G+  D   P+ I   E V  V  IAAG  +  A+T  G +Y 
Sbjct: 143 FNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV-CVKMIAAGAEHTTAITEGGDLYG 201

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G G    LG  ++ D   P  + +   +G  +V V+ G  H V++ SSG +YT+G    
Sbjct: 202 WGWGRYGNLGLSDRDDRSVPEKVSSV--EGEKMVLVACGWRHSVSVSSSGALYTYGWSKY 259

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LGHGD  D  +P  L +LK     Q+    R T  + + G +YG+GW  FG +     
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV----- 314

Query: 414 GVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           GV D V    P  ++      + Q++ G  HT+ +T+   +F +G     QLGH
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGH 368



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 142/334 (42%), Gaps = 57/334 (17%)

Query: 117 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +  G  HT+  S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 78  VICGADHTIAYSDDEMQLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDS 136

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   V  +GQV + G N +   G    N+    P+ ++A +GV  K + AG   T  +T 
Sbjct: 137 HCLTVTFNGQVHSWGRNQNGQLG-LGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITE 195

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++  G   +G LG  D  DR  P+ ++ +E    +V +A G  + ++V+ +G +Y++
Sbjct: 196 GGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGE-KMVLVACGWRHSVSVSSSGALYTY 254

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI------------------------------ 324
           G      LGHG+  D L PR ++  +   I                              
Sbjct: 255 GWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQV 314

Query: 325 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
                                +V+V+ G  H +AL  +  +++WG+G  G LGHG+ ID+
Sbjct: 315 GVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDR 374

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
             P+ + +L   L    C +   + V+  T  V+
Sbjct: 375 NTPKMIDALS--LDGSACKQLESSNVVPMTVKVW 406



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 6/195 (3%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           SV+ I+AG ++  A+    +V S+G G +  LGHG+  D   P  + +F      V  V 
Sbjct: 22  SVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVP--RVTSVI 79

Query: 331 AGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
            G +H +A  D    +Y+WG G  G LGHG+  D   P+P+ +L+     Q+        
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCL 139

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            +   G V+ +G    G LG    G +   L P+ + +     V  I+ G  HT  +T+ 
Sbjct: 140 TVTFNGQVHSWGRNQNGQLGL---GNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEG 196

Query: 450 GRLFGFGDNERAQLG 464
           G L+G+G      LG
Sbjct: 197 GDLYGWGWGRYGNLG 211



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 16/197 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H++ +S+S ++++ G S  G LGHG      V   ++       + Q+S    H
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVP-RKLEALKDVPISQISGGWRH 293

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V + G+++  G N     G  D N     P  V         QV  G   T  LT  
Sbjct: 294 TMAVAEDGKLYGWGWNKFGQVGVED-NVDHCSPVEVNFPDEQKIVQVACGWRHTLALTEN 352

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-------------VQIAAGPSYM 282
            ++ + G    GQLGHG+ +DR TPK I  L   GS              V++   PS  
Sbjct: 353 KNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLDGSACKQLESSNVVPMTVKVWVSPSER 412

Query: 283 LAVTGNGVVYSFGSGSN 299
            A+  +  V   G+G++
Sbjct: 413 FALVPDENVCKSGNGTD 429


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 160/320 (50%), Gaps = 8/320 (2%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV VSA  +H+  +L    + T G       GH D    +  P ++          V  G
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV-PTVISGFDAPGITSVICG 74

Query: 226 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            + T   +   H V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGI-KIKQLACGDSHCLA 133

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 134 VTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAF--EGISVKMIAAGAEHTAAVTEDGD 191

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +Y WG G  G LG GD  D+ +PE +SS++    V V    R T  +  +GS+Y +GW  
Sbjct: 192 IYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +G LG  D    +  L P  +++L+    SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 252 YGQLGHGDF---EDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG 308

Query: 465 HDTLRGCLEPTEIFIQEMEE 484
                    P ++   E ++
Sbjct: 309 AGDNADHCSPAQVNFPEEQK 328



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 163/332 (49%), Gaps = 8/332 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  H++ L++ + + + G    G LGHG    + V      F +      +  +++ 
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHT 78

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            A+     QV++ G       GH ++   +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 79  TAYSEDEHQVYSWGWGDFGRLGHGNSTD-VFTPQPVKALQGIKIKQLACGDSHCLAVTMA 137

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V + G N +GQLG G T D   P++I   E + SV  IAAG  +  AVT +G +Y +G
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGI-SVKMIAAGAEHTAAVTEDGDIYGWG 196

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G    LG G+++D   P  + +   +G  +V V+ G  H + + SSG +YT+G    G 
Sbjct: 197 WGRYGNLGLGDRNDRFVPEKVSSV--EGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G  D   
Sbjct: 255 LGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNA- 313

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
                 P  ++      V+Q++ G  HT+  T
Sbjct: 314 --DHCSPAQVNFPEEQKVAQVACGWRHTLAFT 343



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 54/258 (20%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR--------- 321
           +VV ++AG S+ +A+    V+ ++G G +  LGHG+  D L P  I  F           
Sbjct: 15  AVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICG 74

Query: 322 ------------------------------------------KGIHVVRVSAGDEHVVAL 339
                                                     +GI + +++ GD H +A+
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAV 134

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
             +G V +WG+   G LG G   D  LP+ + + +      + A    T  + + G +YG
Sbjct: 135 TMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYG 194

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++
Sbjct: 195 WGWGRYGNLGLGDR--NDRFV-PEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSK 251

Query: 460 RAQLGHDTLRGCLEPTEI 477
             QLGH      L P ++
Sbjct: 252 YGQLGHGDFEDHLVPHKV 269


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 172/350 (49%), Gaps = 10/350 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H++ L+S   V S G    G LGHG +     S T+++      +V V+   +H
Sbjct: 11  ISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLSALDGHQIVSVTCGADH 69

Query: 176 AAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
                QSG +V++ G       GH +++  +F P  ++AL G+  KQ+  G +    +T 
Sbjct: 70  TVAYSQSGXEVYSWGWGDFGRLGHGNSS-DLFTPLPIKALHGIRIKQIACGDSHCLAVTX 128

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG GDT D   P+ I   E +  +  +AAG  +  AVT +G +Y +
Sbjct: 129 EGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKXVAAGAEHTAAVTEDGDLYGW 187

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G++ D L P  + +    G     V+ G  H +++  SG +YT+G    G
Sbjct: 188 GWGRYGNLGLGDRTDRLVPERVTS--TGGEKXSXVACGWRHTISVSYSGALYTYGWSKYG 245

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D  +P  L +L +    Q+    R T  L   G +YG+GW  FG +G  +  
Sbjct: 246 QLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNL 305

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                ++ R  D  +   V Q+S G  HT+ VT+R  +F +G     QLG
Sbjct: 306 DQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRGTNGQLG 352



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 7/241 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSFGS 296
           V + G    GQLGHGD  DRP+P  ++ L+    +V +  G  + +A + +G  VYS+G 
Sbjct: 27  VCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADHTVAYSQSGXEVYSWGW 85

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           G    LGHG   D   P  I+     GI + +++ GD H +A+   G V +WG+   G L
Sbjct: 86  GDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQL 143

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           G GD  D  +P+ + + +      V A    T  + + G +YG+GW  +G+LG  DR  +
Sbjct: 144 GLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR--T 201

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
           D+++  R+  S      S ++ G  HT+ V+  G L+ +G ++  QLGH  L   L P +
Sbjct: 202 DRLVPERVT-STGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHK 260

Query: 477 I 477
           +
Sbjct: 261 L 261



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 6/194 (3%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V+ I+AG S+ +A+    +V S+G G +  LGHG+  D   P  +      G  +V V+ 
Sbjct: 8   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSAL--DGHQIVSVTC 65

Query: 332 GDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           G +H VA   SG  VY+WG G  G LGHG+  D   P P+ +L      Q+         
Sbjct: 66  GADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 125

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V  +G    G LG  D   ++  L P+ + +     +  ++ G  HT  VT+ G
Sbjct: 126 VTXEGEVQSWGRNQNGQLGLGD---TEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDG 182

Query: 451 RLFGFGDNERAQLG 464
            L+G+G      LG
Sbjct: 183 DLYGWGWGRYGNLG 196



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 117/260 (45%), Gaps = 8/260 (3%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++    V S G +  G LG G +T   +   +I       +  V+A   
Sbjct: 115 QIACGDSHCLAVTXEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKXVAAGAE 173

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           H A V + G ++  G       G  D T+R +  P  V +  G     V  G   T  ++
Sbjct: 174 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKXSXVACGWRHTISVS 231

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G ++T G + +GQLGHGD  D   P  +  L     + QI+ G  +  A+T +G +Y 
Sbjct: 232 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGARHTXALTSDGKLYG 290

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G      +G G   D+  P  +Q        VV+VS G  H +A+     V+ WG+G  
Sbjct: 291 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 348

Query: 354 GALGHGDEIDKTLPEPLSSL 373
           G LG G+ +D+  P+ + +L
Sbjct: 349 GQLGIGESVDRNFPKIIEAL 368



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V+ +SAG  H VAL S   V +WG+G  G LGHGD  D+  P  LS+L  H  V V    
Sbjct: 8   VLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGA 67

Query: 386 RKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             T     +G  VY +GW  FG LG    G S  +  P  + +L    + QI+ G  H +
Sbjct: 68  DHTVAYSQSGXEVYSWGWGDFGRLG---HGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 124

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            VT  G +  +G N+  QLG       L P +I
Sbjct: 125 AVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKI 157



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G  T + V   R+          V+    H
Sbjct: 168 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKXSXVACGWRH 226

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EAL      Q++ G   T  LT  
Sbjct: 227 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGARHTXALTSD 285

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G G+ LD+ +P  +  P ++   VVQ++ G  + LAVT    V+++
Sbjct: 286 GKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQ--KVVQVSCGWRHTLAVTERNNVFAW 343

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LG GE  D   P+ I+     G
Sbjct: 344 GRGTNGQLGIGESVDRNFPKIIEALSVDG 372



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 9/165 (5%)

Query: 106 IVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           +  T       +  G  HT+ +S S ++++ G S  G LGHG      +   ++   S +
Sbjct: 209 VTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNS 267

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQ 221
            + Q+S    H   +   G+++  G N     G   + D   P+ + R  +  K V   Q
Sbjct: 268 FISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---Q 323

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           V+ G   T  +T R +V   G  T+GQLG G+++DR  PK I  L
Sbjct: 324 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 368


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 8/302 (2%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           + V+ +SA  +H   +L    V + G       GH DT+  +  P  + AL       + 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL-PTHLSALDAQQIDSIA 71

Query: 224 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSHC 130

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V+AG EH VA+  +
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITEN 188

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +   G +Y +GW
Sbjct: 189 GELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGW 248

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
             +G LG    G  +  L P+ L +L    +SQ+S G  H++ +T  G L+G+G N+  Q
Sbjct: 249 SKYGQLG---HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQ 305

Query: 463 LG 464
           +G
Sbjct: 306 VG 307



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 177/353 (50%), Gaps = 14/353 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  HT+ L+S + V S G    G LGHG +T   +  T ++   A  +  ++   +H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRLLPTHLSALDAQQIDSIACGADH 76

Query: 176 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
             A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +T+
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSS-DLLIPQPIIALQGLRIKQIACGDSHCLAVTM 135

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG G + D   P+ I   + V  +  +AAG  + +A+T NG +Y +
Sbjct: 136 EGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELYGW 194

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G+++D   P  + +       +V V+ G  H +++ S G +YT+G    G
Sbjct: 195 GWGRYGNLGLGDRNDRWIPEKVSSVDCD--KMVMVACGWRHTISVSSLGGLYTYGWSKYG 252

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHG+  D  +P+ L +L   L  QV    R +  L  TG +YG+GW  FG +     G
Sbjct: 253 QLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQV-----G 307

Query: 415 VSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           V D V R  P  +       V QIS G  HT+ VT++  +F +G     QLGH
Sbjct: 308 VGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGH 360



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 7/257 (2%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           ++AG + T  L     V + G    GQLGHGDT DR  P  ++ L+    +  IA G  +
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALD-AQQIDSIACGADH 76

Query: 282 MLAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            LA +     +YS+G G    LGHG   D L P+ I     +G+ + +++ GD H +A+ 
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL--QGLRIKQIACGDSHCLAVT 134

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG+
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGW 194

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 195 GWGRYGNLGLGDR--NDRWI-PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKY 251

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH      L P ++
Sbjct: 252 GQLGHGNFEDSLVPQKL 268



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 150/328 (45%), Gaps = 9/328 (2%)

Query: 117 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 70  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 128

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   V   G+V + G N +   G   T+     P+ ++  +GVP K V AG   +  +T 
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQLG-LGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE 187

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+  G +Y++
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVD-CDKMVMVACGWRHTISVSSLGGLYTY 246

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G +Y WG    G
Sbjct: 247 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLLYGWGWNKFG 304

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-- 412
            +G GD +D+  P  +        VQ+    R T  + +  +V+ +G    G LG  D  
Sbjct: 305 QVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTV 364

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGL 440
              S K++    +D     H+   +T L
Sbjct: 365 DRNSPKIIEALSVDGSSGPHIESSNTDL 392


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 155/302 (51%), Gaps = 8/302 (2%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           + V+ +SA  +H   +L    V + G       GH DT+  +  P  + AL       + 
Sbjct: 13  SRVLLISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLL-PTHLSALDAQQIDSIA 71

Query: 224 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G + T  +   R  +++ G    G+LGHG++ D   P+ I  L+ +  + QIA G S+ 
Sbjct: 72  CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGL-RIKQIACGDSHC 130

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           LAVT  G V S+G   N  LG G   D L P+ IQTF  +G+ +  V+AG EH VA+  +
Sbjct: 131 LAVTMEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTF--QGVPIKMVAAGAEHSVAITEN 188

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +   G +Y +GW
Sbjct: 189 GELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGW 248

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
             +G LG    G  +  L P+ L +L    +SQ+S G  H++ +T  G L+G+G N+  Q
Sbjct: 249 SKYGQLG---HGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQ 305

Query: 463 LG 464
           +G
Sbjct: 306 VG 307



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 177/353 (50%), Gaps = 14/353 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  HT+ L+S + V S G    G LGHG +T   +  T ++   A  +  ++   +H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHG-DTDDRLLPTHLSALDAQQIDSIACGADH 76

Query: 176 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
             A+     ++++ G       GH +++  +  P+ + AL+G+  KQ+  G +    +T+
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSS-DLLIPQPIIALQGLRIKQIACGDSHCLAVTM 135

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG G + D   P+ I   + V  +  +AAG  + +A+T NG +Y +
Sbjct: 136 EGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGV-PIKMVAAGAEHSVAITENGELYGW 194

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G+++D   P  + +       +V V+ G  H +++ S G +YT+G    G
Sbjct: 195 GWGRYGNLGLGDRNDRWIPEKVSSVDCD--KMVMVACGWRHTISVSSLGGLYTYGWSKYG 252

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHG+  D  +P+ L +L   L  QV    R +  L  TG +YG+GW  FG +     G
Sbjct: 253 QLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQV-----G 307

Query: 415 VSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           V D V R  P  +       V QIS G  HT+ VT++  +F +G     QLGH
Sbjct: 308 VGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGH 360



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 7/257 (2%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           ++AG + T  L     V + G    GQLGHGDT DR  P  ++ L+    +  IA G  +
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALD-AQQIDSIACGADH 76

Query: 282 MLAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            LA +     +YS+G G    LGHG   D L P+ I     +G+ + +++ GD H +A+ 
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL--QGLRIKQIACGDSHCLAVT 134

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG+
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGW 194

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DR  +D+ + P  + S+    +  ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 195 GWGRYGNLGLGDR--NDRWI-PEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKY 251

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH      L P ++
Sbjct: 252 GQLGHGNFEDSLVPQKL 268



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 150/328 (45%), Gaps = 9/328 (2%)

Query: 117 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           I  G  HTL  S S   ++S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 70  IACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIAL-QGLRIKQIACGDS 128

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   V   G+V + G N +   G   T+     P+ ++  +GVP K V AG   +  +T 
Sbjct: 129 HCLAVTMEGEVQSWGRNQNGQLG-LGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE 187

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++  G   +G LG GD  DR  P+ ++ ++    +V +A G  + ++V+  G +Y++
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVD-CDKMVMVACGWRHTISVSSLGGLYTY 246

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      LGHG   D L P+ +Q    K I   +VS G  H +AL S+G +Y WG    G
Sbjct: 247 GWSKYGQLGHGNFEDSLVPQKLQALSDKLIS--QVSGGWRHSMALTSTGLLYGWGWNKFG 304

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-- 412
            +G GD +D+  P  +        VQ+    R T  + +  +V+ +G    G LG  D  
Sbjct: 305 QVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTV 364

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGL 440
              S K++    +D     H+   +T L
Sbjct: 365 DRNSPKIIEALSVDGSSGPHIESSNTDL 392


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 168/336 (50%), Gaps = 10/336 (2%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +V++ G    G LG G  +    + T ++      +V ++AS+ H AF+   G+V+T G 
Sbjct: 3   AVYALGRGDLGQLGIGDYSDH-PTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGS 61

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N +   G R     +  P  V AL       +  G   T  +T  G + + G + +GQLG
Sbjct: 62  NDAGQLGVRGMEEQVV-PIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 251 --HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
              G+ +D   P+ +    ++    ++AAG  + LA+TG+G VYSFG GS+  LGHG   
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDL-HFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD 179

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
               P  +++    G+ V +++ G+ H  AL   G V+TWG+G  G LGHG   +  LP 
Sbjct: 180 GCSTPSLVKSLW--GLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPV 237

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            + +L  H  +Q+      T  +   G +  F W G G  G    G  + VL P+ +  L
Sbjct: 238 AVKALVDHDVIQIACGGDHTLAITSDGRL--FSW-GHGLWGQTGHGTKEDVLSPKQVHQL 294

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               + Q+S G  HTVV+ DRG ++G+GD E+ QLG
Sbjct: 295 EGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 130/272 (47%), Gaps = 8/272 (2%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P  +  L G     + A    T FLT  G V+T GSN  GQLG     ++  P  +A L+
Sbjct: 26  PTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIRVAALD 85

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIH 325
               V  IA G  + +AVT  G + S+G      LG   G   D +QPR ++  R   +H
Sbjct: 86  -THMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRD--LH 142

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             RV+AG  H +AL  SG VY++G G  GALGHG+    + P  + SL      Q+   +
Sbjct: 143 FSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGE 202

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             +  L   G V+ +G   +G LG    G +  +  P  + +L  H V QI+ G  HT+ 
Sbjct: 203 NHSAALTVDGKVFTWGRGKYGQLG---HGSTQNIKLPVAVKALVDHDVIQIACGGDHTLA 259

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +T  GRLF +G     Q GH T    L P ++
Sbjct: 260 ITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQV 291



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 146/301 (48%), Gaps = 6/301 (1%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I    YHT  +++   V++ GS+  G LG      Q V   R+       V  ++   
Sbjct: 38  VHIAASDYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPI-RVAALDTHMVTHIACGF 96

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H   V ++G + + G +     G    N     +PR+V+  + +   +V AG   T  L
Sbjct: 97  KHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLAL 156

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V++ G  + G LGHG+     TP  +  L  +G V QIA G ++  A+T +G V+
Sbjct: 157 TGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGLG-VTQIACGENHSAALTVDGKVF 215

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G G    LGHG   +   P A++        V++++ G +H +A+ S G +++WG G 
Sbjct: 216 TWGRGKYGQLGHGSTQNIKLPVAVKALVDH--DVIQIACGGDHTLAITSDGRLFSWGHGL 273

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G  GHG + D   P+ +  L+  + VQV A  R T VL+D G VYG+G      LG  D
Sbjct: 274 WGQTGHGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCD 333

Query: 413 R 413
           R
Sbjct: 334 R 334



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 116/230 (50%), Gaps = 14/230 (6%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
           H  +V+A   H   +  SG V++ GD SS   GH + +     P LV++L G+   Q+  
Sbjct: 142 HFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD-GCSTPSLVKSLWGLGVTQIAC 200

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G N +  LT+ G V T G   +GQLGHG T +   P ++  L +   V+QIA G  + LA
Sbjct: 201 GENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDH-DVIQIACGGDHTLA 259

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +T +G ++S+G G     GHG + D L P+  Q  + +G  +V+VSAG  H V L   G 
Sbjct: 260 ITSDGRLFSWGHGLWGQTGHGTKEDVLSPK--QVHQLEGRVLVQVSAGARHTVVLLDRGE 317

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           VY WG      LG  D  D        S   H+ V +C   R   VL++T
Sbjct: 318 VYGWGDCEQRQLGTCDRCD-------FSTYGHICVSLC---RCECVLMNT 357



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 94/187 (50%), Gaps = 3/187 (1%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY+ G G    LG G+  D   P ++ T   K I  V ++A D H   L   G VYT G 
Sbjct: 4   VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDI--VHIAASDYHTAFLTDEGEVYTTGS 61

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG     ++ +P  +++L +H+   +    + T  + +TG++  +G   +G LGF
Sbjct: 62  NDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGF 121

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               + D V +PRI+   R  H S+++ G YHT+ +T  G ++ FGD     LGH  L G
Sbjct: 122 DSGNIVDGV-QPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDG 180

Query: 471 CLEPTEI 477
           C  P+ +
Sbjct: 181 CSTPSLV 187



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 63/151 (41%), Gaps = 15/151 (9%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VVQ 168
           QI  G  H+  ++ +  VF+ G    G LGHG       S   I  P A        V+Q
Sbjct: 197 QIACGENHSAALTVDGKVFTWGRGKYGQLGHG-------STQNIKLPVAVKALVDHDVIQ 249

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           ++   +H   +   G++F+ G       GH  T   +  P+ V  L+G    QV+AG   
Sbjct: 250 IACGGDHTLAITSDGRLFSWGHGLWGQTGH-GTKEDVLSPKQVHQLEGRVLVQVSAGARH 308

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 259
           T  L  RG V+  G     QLG  D  D  T
Sbjct: 309 TVVLLDRGEVYGWGDCEQRQLGTCDRCDFST 339


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 168/350 (48%), Gaps = 8/350 (2%)

Query: 117 ITTGRYHTLLISNSSVF-SCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  H++ +   +V  S G    G LGHG    + V      F +      +  +++ 
Sbjct: 26  VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHT 85

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            A+  +  QV++ G       GH +++  +F P+ V AL+G+  KQ+  G +    +T+ 
Sbjct: 86  TAYSEEEQQVYSWGWGDFGRLGHGNSSD-VFTPQPVRALQGIKIKQMACGDSHCLAVTMG 144

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V + G N +GQLG G T D   P+ I   E +  V  IAAG  +  AVT +G +Y +G
Sbjct: 145 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGI-CVKMIAAGAEHTAAVTEDGDLYGWG 203

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G    LG G+++D   P  +     +G  +V ++ G  H + + SSG +YT+G    G 
Sbjct: 204 WGRYGNLGLGDRNDRFVPEKVSLV--EGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQ 261

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LGHGD  D   P  + +LK     Q+    R T  L   G +YG+GW  FG +G  D   
Sbjct: 262 LGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD--- 318

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           S     P  +       V+Q++ G  HT+  T++  +F +G     QLGH
Sbjct: 319 SVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGH 368



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 160/320 (50%), Gaps = 9/320 (2%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV VSA  +H+  +L+   + + G       GH D    +  P ++          V  G
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLV-PTVISGFDAPRITSVICG 81

Query: 226 LNF-TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            +  T +      V++ G    G+LGHG++ D  TP+ +  L+ +  + Q+A G S+ LA
Sbjct: 82  ADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGI-KIKQMACGDSHCLA 140

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT  G V S+G   N  LG G   D L P+ IQ F  +GI V  ++AG EH  A+   G 
Sbjct: 141 VTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF--EGICVKMIAAGAEHTAAVTEDGD 198

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +Y WG G  G LG GD  D+ +PE +S ++    V +    R T  +  +G +Y +GW  
Sbjct: 199 LYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSK 258

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +G LG  D    +  L P  +++L+    SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 259 YGQLGHGDF---EDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVG 315

Query: 465 H-DTLRGCLEPTEIFIQEME 483
             D++  C     +F  E +
Sbjct: 316 AGDSVDHCSPVQVMFPAEQK 335



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 6/253 (2%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  H L ++    V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 130 QMACGDSHCLAVTMGGEVQSWGRNQNGQLGLG-TTEDSLLPQKIQAFEGICVKMIAAGAE 188

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G ++  G       G  D N   F P  V  ++G     +  G   T  ++ 
Sbjct: 189 HTAAVTEDGDLYGWGWGRYGNLGLGDRNDR-FVPEKVSLVEGEKMVLIACGWRHTITVSS 247

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++T G + +GQLGHGD  D   P  +  L++  S  QI+ G  + +A+T +G +Y +
Sbjct: 248 SGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKD-SSTSQISGGWRHTMALTSDGKLYGW 306

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      +G G+  D   P  +Q        V +V+ G  H +A      V+ WG+G  G
Sbjct: 307 GWNKFGQVGAGDSVDHCSP--VQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSG 364

Query: 355 ALGHGDEIDKTLP 367
            LGHG+ +D+  P
Sbjct: 365 QLGHGEIVDRNKP 377



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ +  ++  G    G LG G    + V   +++      +V ++    H
Sbjct: 183 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVP-EKVSLVEGEKMVLIACGWRH 241

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +F P  VEALK     Q++ G   T  LT  
Sbjct: 242 TITVSSSGILYTYGWSKYGQLGHGDFEDHLF-PHKVEALKDSSTSQISGGWRHTMALTSD 300

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G GD++D  +P  +  P E+   V Q+A G  + LA T    V+++
Sbjct: 301 GKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQ--KVAQVACGWRHTLAYTEKKNVFAW 358

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G++  LGHGE  D  +P  I      G
Sbjct: 359 GRGTSGQLGHGEIVDRNKPLMIDAISPDG 387



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 64/162 (39%), Gaps = 15/162 (9%)

Query: 117 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV------QV 169
           I  G  HT+ +S+S + ++ G S  G LGHG        F    FP     +      Q+
Sbjct: 235 IACGWRHTITVSSSGILYTYGWSKYGQLGHG-------DFEDHLFPHKVEALKDSSTSQI 287

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           S    H   +   G+++  G N     G  D+      P  V         QV  G   T
Sbjct: 288 SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHC-SPVQVMFPAEQKVAQVACGWRHT 346

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
              T + +V   G  T GQLGHG+ +DR  P  I  +   GS
Sbjct: 347 LAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAISPDGS 388


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 153/300 (51%), Gaps = 8/300 (2%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV VSA  +H+  +L    + + G       GH D    +  P ++          V  G
Sbjct: 15  VVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV-PTVLSGFDAPAITSVICG 73

Query: 226 LNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            + T  +      V++ G    G+LGHG++ D  TP+ +  L+ +  + QIA G S+ LA
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL-KIKQIACGDSHCLA 132

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT  G V S+G   N  LG G   D L P+ IQ F    + V  ++AG EH  A+   G 
Sbjct: 133 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFES--VCVKMIAAGAEHTAAVTEDGD 190

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +Y WG G  G LG GD  D+ LPE +SS++    V V    R T  + D+G++Y +GW  
Sbjct: 191 LYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSK 250

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +G LG  D    +  L P  +++L+   +SQIS G  HT+ +T  G+L+G+G N+  Q+G
Sbjct: 251 YGQLGHGDF---EDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 5/294 (1%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  H++ L++ + + S G    G LGHG    + V      F + A    +  +++ 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            A+     QV++ G       GH +++  +F P+ V+AL+G+  KQ+  G +    +T+ 
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSD-VFTPQPVKALQGLKIKQIACGDSHCLAVTMA 136

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V + G N +GQLG G T D   P+ I   E V  V  IAAG  +  AVT +G +Y +G
Sbjct: 137 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESV-CVKMIAAGAEHTAAVTEDGDLYGWG 195

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G    LG G+++D L P  + +   +G  +V V+ G  H + +  SG +YT+G    G 
Sbjct: 196 WGRYGNLGLGDRNDRLLPEKVSSV--EGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           LGHGD  D  +P  + +LK     Q+    R T  L   G +YG+GW  FG +G
Sbjct: 254 LGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVG 307



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 132/257 (51%), Gaps = 7/257 (2%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           V+AG + +  L     + + G    GQLGHGD  DR  P  ++  +   ++  +  G  +
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFD-APAITSVICGADH 76

Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             A + + + VYS+G G    LGHG   D   P+ ++    +G+ + +++ GD H +A+ 
Sbjct: 77  TTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKAL--QGLKIKQIACGDSHCLAVT 134

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
            +G V +WG+   G LG G   D  LP+ + + +S     + A    T  + + G +YG+
Sbjct: 135 MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGW 194

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DR  +D++L P  + S+    +  ++ G  HT+ V+D G L+ +G ++ 
Sbjct: 195 GWGRYGNLGLGDR--NDRLL-PEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKY 251

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH      L P ++
Sbjct: 252 GQLGHGDFEDHLVPHKV 268



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 3/149 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ +  ++  G    G LG G    + +   +++      +V V+    H
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLP-EKVSSVEGEKMVLVACGWRH 233

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  VEALK     Q++ G   T  LT  
Sbjct: 234 TITVSDSGNLYTYGWSKYGQLGHGDFEDHLV-PHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           G ++  G N  GQ+G G+  D  +P  ++
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSSPGQVS 321


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 170/351 (48%), Gaps = 9/351 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  H++ ++S   V S G    G LGHG +  +C++   I+  + A +  V     +
Sbjct: 18  VSCGSSHSVAILSCGIVTSWGRGEDGQLGHG-QADECLAPKAISTLTDAGIESVVCGAEY 76

Query: 176 AAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
              V  S GQV++ G       GH D N  +F PR +E   G P  +V  G   T  +  
Sbjct: 77  TIAVAPSRGQVYSWGWGDFGRLGHGDCN-DVFVPRPIEFFSGRPVHRVACGDTHTLVVAG 135

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G + T G N +GQLG G T D  +P+ +  L+    V  +A G  + LA T +G V+S+
Sbjct: 136 EGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGE-RVRSVACGSEHSLAATESGTVFSW 194

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG GE  D   P  +     +GI +V    G  H   +   G V+T+G    G
Sbjct: 195 GWGRYGNLGDGESQDRYLPTRVVGL--EGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYG 252

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D+T+P  +++L+      V    R T     +G++YG+GW  FG LG  D  
Sbjct: 253 QLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDS- 311

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            SD+     +  +L    VS ++ G  HTV VT+ GR++ +G     QLGH
Sbjct: 312 -SDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGH 361



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 6/212 (2%)

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
           EE   V  ++ G S+ +A+   G+V S+G G +  LGHG+  + L P+AI T    GI  
Sbjct: 10  EEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIE- 68

Query: 327 VRVSAGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V  G E+ +A+  S G VY+WG G  G LGHGD  D  +P P+         +V    
Sbjct: 69  -SVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGD 127

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T V+   G ++ FG    G LG    G ++  L P+++ +L+   V  ++ G  H++ 
Sbjct: 128 THTLVVAGEGELFTFGRNQNGQLGL---GHTNDCLSPQLVVALQGERVRSVACGSEHSLA 184

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            T+ G +F +G      LG    +    PT +
Sbjct: 185 ATESGTVFSWGWGRYGNLGDGESQDRYLPTRV 216



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 5/249 (2%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G  HTL+++    +F+ G +  G LG G  T  C+S   +       V  V+    
Sbjct: 122 RVACGDTHTLVVAGEGELFTFGRNQNGQLGLG-HTNDCLSPQLVVALQGERVRSVACGSE 180

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+    +SG VF+ G       G  ++ +  + P  V  L+G+       G   +  ++ 
Sbjct: 181 HSLAATESGTVFSWGWGRYGNLGDGES-QDRYLPTRVVGLEGIRMVSAECGWRHSAVVSE 239

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V T G + +GQLGHGD  DR  P  +A L     +  +A G  + +A   +G +Y +
Sbjct: 240 DGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHT-RISSVAGGWRHTMAADSSGNLYGW 298

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      LG G+  D   P  +      G  V  V+ G  H VA+   G VY+WG+G  G
Sbjct: 299 GWNKFGQLGLGDSSDRPSPVLVGG-ALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNG 357

Query: 355 ALGHGDEID 363
            LGHG E D
Sbjct: 358 QLGHGAEQD 366


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 181/353 (51%), Gaps = 15/353 (4%)

Query: 127 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQV 185
           +++ ++F  GS++ G LG G    + +   R ++F  A  + Q++  EN+   + + GQV
Sbjct: 73  VTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQV 132

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           ++CG+N     GH    +   R +L+  L     K+V  G + T  +   G + + GSN 
Sbjct: 133 YSCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNA 189

Query: 246 HGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
            GQLG +   L    P  +  L     VVQ+A G +++LA+T NG +YS+GS S+  LG 
Sbjct: 190 EGQLGLNSKNLIECVPHMVRALG-TSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGL 248

Query: 305 G-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
           G +  +E++P+ I +    G+ +  ++ G  H +A+  SG V+ WGK   G LG  D  +
Sbjct: 249 GTDVKNEIKPKLISSL--AGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRN 306

Query: 364 KTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
           + LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G +   + P
Sbjct: 307 RNLPRQLQTLQNAKVCYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGNTSNEILP 362

Query: 423 RILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           R +  L    V+QIS G  HT+ +V  RGR++ +G     QLG++  R    P
Sbjct: 363 RQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATP 415



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 151/317 (47%), Gaps = 20/317 (6%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVV--QVS 170
           QI  G  +T+LI+ +  V+SCG++  G LGH  G +  Q +       P     V  +V+
Sbjct: 115 QIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRLQLI-------PGLDAFVFKKVA 167

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
              +H   V + GQ+F+ G N+    G    N     P +V AL      QV  G+N   
Sbjct: 168 CGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVL 227

Query: 231 FLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
            LT  G +++ GSN+ GQLG G D  +   PK I+ L  V  +  I  G  + +A++ +G
Sbjct: 228 ALTNNGKLYSWGSNSDGQLGLGTDVKNEIKPKLISSLAGV-PIAFITCGGYHSMAISKSG 286

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+ +G  +   LG  +  +   PR +QT +     V   + G+E  V L   G V+T G
Sbjct: 287 AVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNA--KVCYAACGEEFSVFLTVDGGVFTCG 344

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 408
            G  G LGHG+  ++ LP  +  L      Q+   KR T  LV + G VY +G  G G L
Sbjct: 345 AGMYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQL 404

Query: 409 GFPDRGVSDKVLRPRIL 425
           G     ++  V  P+++
Sbjct: 405 G---NNITRSVATPQVV 418


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 174/353 (49%), Gaps = 10/353 (2%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + ++ G  H++ L+S   V S G    G LGHG    +    T ++      +  V+   
Sbjct: 17  LALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFP-TIVSALDDCEISSVTCGA 75

Query: 174 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           +H   +  S + V++ G       GH +++  +F P+ ++ALKG+  KQ+  G +    +
Sbjct: 76  DHTTALSNSTKTVYSWGWGDFGRLGHGNSS-DLFIPQPIKALKGLEVKQIACGDSHCLAI 134

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V   G N +GQLG G T D  TP  +   E V +V  +AAG  +  AVT NG +Y
Sbjct: 135 TTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGV-AVKMLAAGAEHTTAVTENGKLY 193

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G G    LG G++ D L P  +      G  +  V+ G  H + +  SG +YT+G   
Sbjct: 194 GWGWGRYGNLGLGDREDRLVPDQVAAV--AGELMKMVACGWRHTICVAESGNMYTFGWSK 251

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHGD  D  +P  + +LKS     +    R TF L   G +YG+GW  FG +G   
Sbjct: 252 YGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGC-- 309

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            G ++    P+++  L+   V+ +  G  HT+ +TDRG ++ +G     QLGH
Sbjct: 310 -GNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGH 361



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 154/301 (51%), Gaps = 8/301 (2%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            V+ +SA  +H+  +L    V + G       GH D     F P +V AL       VT 
Sbjct: 15  QVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHF-PTIVSALDDCEISSVTC 73

Query: 225 GLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
           G + T  L+     V++ G    G+LGHG++ D   P+ I  L+ +  V QIA G S+ L
Sbjct: 74  GADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGL-EVKQIACGDSHCL 132

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           A+T +G V  +G   N  LG G   D L P  +  F  +G+ V  ++AG EH  A+  +G
Sbjct: 133 AITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAF--EGVAVKMLAAGAEHTTAVTENG 190

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            +Y WG G  G LG GD  D+ +P+ ++++   L   V    R T  + ++G++Y FGW 
Sbjct: 191 KLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWS 250

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
            +G LG  D   +D ++ P  + +L++  +  I+ G  HT  +   GRL+G+G N+  Q+
Sbjct: 251 KYGQLGHGD--FADHLI-PHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQV 307

Query: 464 G 464
           G
Sbjct: 308 G 308



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 144/314 (45%), Gaps = 9/314 (2%)

Query: 117 ITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +T G  HT  +SNS+  V+S G    G LGHG  +   +    I       V Q++  ++
Sbjct: 71  VTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIP-QPIKALKGLEVKQIACGDS 129

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   +   G+V   G N +   G   T   +  P  + A +GV  K + AG   T  +T 
Sbjct: 130 HCLAITTDGEVLGWGRNQNGQLGLGHT-EDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTE 188

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYS 293
            G ++  G   +G LG GD  DR  P  +A +   G +++ +A G  + + V  +G +Y+
Sbjct: 189 NGKLYGWGWGRYGNLGLGDREDRLVPDQVAAV--AGELMKMVACGWRHTICVAESGNMYT 246

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           FG      LGHG+  D L P  +Q  + K I  +  + G  H  ALDS G +Y WG    
Sbjct: 247 FGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAI--TGGWRHTFALDSDGRLYGWGWNKF 304

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G +G G+  D++ P+ +  L+  +   V    R T  + D G+VY +G    G LG  D 
Sbjct: 305 GQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDT 364

Query: 414 GVSDKVLRPRILDS 427
                  R  IL S
Sbjct: 365 VDRSTPKRIEILSS 378



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 119/241 (49%), Gaps = 7/241 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN-GVVYSFGS 296
           V + G    GQLGHGD  +R  P  ++ L++   +  +  G  +  A++ +   VYS+G 
Sbjct: 35  VCSWGRGEDGQLGHGDAEERHFPTIVSALDDC-EISSVTCGADHTTALSNSTKTVYSWGW 93

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           G    LGHG   D   P+ I+    KG+ V +++ GD H +A+ + G V  WG+   G L
Sbjct: 94  GDFGRLGHGNSSDLFIPQPIKAL--KGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQL 151

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           G G   D   P  L++ +      + A    T  + + G +YG+GW  +G+LG  DR   
Sbjct: 152 GLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDR--- 208

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
           +  L P  + ++    +  ++ G  HT+ V + G ++ FG ++  QLGH      L P +
Sbjct: 209 EDRLVPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQ 268

Query: 477 I 477
           +
Sbjct: 269 V 269



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 6/207 (2%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V+ ++AG S+ +A+    +V S+G G +  LGHG+  +   P  +         +  V+ 
Sbjct: 16  VLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSAL--DDCEISSVTC 73

Query: 332 GDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           G +H  AL +S+  VY+WG G  G LGHG+  D  +P+P+ +LK     Q+         
Sbjct: 74  GADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSHCLA 133

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V G+G    G LG    G ++ VL P  L +     V  ++ G  HT  VT+ G
Sbjct: 134 ITTDGEVLGWGRNQNGQLGL---GHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENG 190

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +L+G+G      LG       L P ++
Sbjct: 191 KLYGWGWGRYGNLGLGDREDRLVPDQV 217



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 6/217 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ N  ++  G    G LG G    + V   ++   +   +  V+    H
Sbjct: 176 LAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVP-DQVAAVAGELMKMVACGWRH 234

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V +SG ++T G +     GH D    +  P  V+ALK    + +T G   T  L   
Sbjct: 235 TICVAESGNMYTFGWSKYGQLGHGDFADHLI-PHQVQALKSKKIQAITGGWRHTFALDSD 293

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G G+T D+ +P+ +  L++ V +VVQ   G  + LA+T  G VYS+
Sbjct: 294 GRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQ--CGWRHTLAMTDRGNVYSW 351

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           G G++  LGHG+  D   P+ I+     G    ++ +
Sbjct: 352 GRGTSGQLGHGDTVDRSTPKRIEILSSDGFACEQIES 388



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 10/192 (5%)

Query: 105 DIVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 162
           D V   AG  M+ +  G  HT+ ++ S ++++ G S  G LGHG      +   ++    
Sbjct: 215 DQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPH-QVQALK 273

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCK 220
           +  +  ++    H   +   G+++  G N      CG+ +       P+LV+ L+     
Sbjct: 274 SKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSS---PQLVKGLQDQVVT 330

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQI-AAG 278
            V  G   T  +T RG+V++ G  T GQLGHGDT+DR TPK I  L   G +  QI ++G
Sbjct: 331 VVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSDGFACEQIESSG 390

Query: 279 PSYMLAVTGNGV 290
            S   + T N +
Sbjct: 391 SSNCTSKTSNWI 402


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 173/352 (49%), Gaps = 15/352 (4%)

Query: 128 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 186
               +F  GS++ G LG G    + +   R ++F  AA + Q++  EN+   + Q G+++
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 187 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
           +CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSNT 
Sbjct: 84  SCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTE 140

Query: 247 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           GQLG +       +P+ +  L     VVQIA G  +  A+T NG +YS+GS S   LG G
Sbjct: 141 GQLGLNSKNFMESSPRMVKTLG-TSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199

Query: 306 -EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
            +   E++P+ I  F   GI +  ++ G  H +A+  SG V+ WGK   G LG  D  D+
Sbjct: 200 TDTKYEIKPKFISAFI--GIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDR 257

Query: 365 TLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G +   + PR
Sbjct: 258 NLPCQLQTLQNAKICYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNSNEILPR 313

Query: 424 ILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +  L    V+QIS G  HT+ +V  RGR++ +G     QLG+ + R    P
Sbjct: 314 QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTP 365



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 139/306 (45%), Gaps = 15/306 (4%)

Query: 110 SAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGH--GPETTQCVS-FTRINFPSAAH 165
            A    QI  G  +T++I+    ++SCG++  G LGH  G +  Q +       F  AA 
Sbjct: 59  KAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVFKKAA- 117

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
                    H   + + GQ+F+ G N+    G    N     PR+V+ L      Q+  G
Sbjct: 118 -----CGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACG 172

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           +     LT  G +++ GSN+ GQLG G DT     PK I+    +  +  IA G  + +A
Sbjct: 173 MKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGI-PIAFIACGGYHSIA 231

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           ++ +G V+ +G  +   LG  +  D   P  +QT +   I     + G+E  V L   G 
Sbjct: 232 ISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI--CYAACGEEFSVFLTVDGG 289

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWM 403
           V+T G G  G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G  
Sbjct: 290 VFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLG 349

Query: 404 GFGSLG 409
           G G LG
Sbjct: 350 GAGQLG 355



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 118/251 (47%), Gaps = 5/251 (1%)

Query: 120 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           G YHTL I+    +FS GS+  G LG   +     S   +     + VVQ++    HA  
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           +  +G++++ G NS    G     +   +P+ + A  G+P   +  G   +  ++  G V
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
              G NT GQLG  DT DR  P  +  L+    +   A G  + + +T +G V++ G+G 
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQN-AKICYAACGEEFSVFLTVDGGVFTCGAGM 297

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 357
              LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 298 YGQLGHGSNSNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355

Query: 358 HGDEIDKTLPE 368
           +      T P+
Sbjct: 356 NHSTRSVTTPQ 366



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YH++ IS S +VF  G +  G LG      + +   ++     A +   +  E  
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLP-CQLQTLQNAKICYAACGEEF 280

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 234
           + F+   G VFTCG       GH   +  I  PR V  L G    Q++ G   T   +  
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 339

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           RG V+  G    GQLG+  T    TP+ +
Sbjct: 340 RGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|297838521|ref|XP_002887142.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332983|gb|EFH63401.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 542

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 147/486 (30%), Positives = 208/486 (42%), Gaps = 45/486 (9%)

Query: 8   FSIEELPSHLIFEILTSGRLSAVDLAHLEL---------TSKTFGGSHGLYPQKFRSLVD 58
           F +   PS ++  +LT+  L   DLA LE          T   F       P    S+ +
Sbjct: 51  FFLASCPS-IVLHVLTTCDLGPRDLAKLEASDAQLSFMATCSFFRKPANFSPDFDLSISE 109

Query: 59  LAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQIT 118
           +AA  +C   +I+  M    + E+  RC G+WK VL+FL + E            + Q  
Sbjct: 110 VAALDICQKRAIFKCMGEEERQEIKRRCGGSWKLVLKFLLAGEFGCR------REKSQAL 163

Query: 119 TGRYHTLLI-SNSSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENH 175
            G  H++ + S   V+S G +  G LG G   ++ Q +    +N      ++Q + S + 
Sbjct: 164 AGPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLN---GIRIIQAAISTDR 220

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRP----IFRPRLVEALKGVPCKQVTAGLNFTGF 231
              +  +G+V+  G     C        P    I  P+ V++L  +   Q   G  FT  
Sbjct: 221 TFVISDAGEVYAFG---KVCFSEAKLEVPETKLITTPQRVKSLAEIFVVQAAIGNYFTAI 277

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----TG 287
           L+  G V+T       +LGH        P+ +    E   VVQIAAG  Y+LA+    TG
Sbjct: 278 LSREGRVYTLSWGNDERLGHQTDHSCSLPQPLLGALENIPVVQIAAGFCYLLALAFQPTG 337

Query: 288 NGV--VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             V  V     G            E  PR I+ F    I  V VSAG  H   +   G V
Sbjct: 338 MSVYSVGCGLGGKLGHGLSDSDASEKYPRLIKKFGLLNIEPVMVSAGPWHAAVVGKDGRV 397

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
            TWG G  G LGHG E  +  P+ +  LK   AV V      TFV+ D G VY FG  G 
Sbjct: 398 CTWGWGRFGCLGHGTEEAENAPKVVDGLKDVKAVHVATGVYTTFVVSDDGQVYSFG-SGG 456

Query: 406 GSLGFPDRGVSDKVLRPRILDSL-----RAHHVSQIST--GLYHTVVVTDRGRLFGFGDN 458
            +LG  D  V +  L P+++ SL     R  HVS  ++  G  HT  +T+ G L+ FG  
Sbjct: 457 ANLGQDD--VDENTLTPKLVSSLKDTKERMVHVSLTNSGNGTGHTFAMTESGTLYAFGAG 514

Query: 459 ERAQLG 464
            R QLG
Sbjct: 515 NRGQLG 520



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 9/152 (5%)

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           AG  H +A+ S G VY++G    G LG G   D   P P+ SL     +Q      +TFV
Sbjct: 164 AGPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLNGIRIIQAAISTDRTFV 223

Query: 391 LVDTGSVYGFGWMGF--GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
           + D G VY FG + F    L  P+  +   +  P+ + SL    V Q + G Y T +++ 
Sbjct: 224 ISDAGEVYAFGKVCFSEAKLEVPETKL---ITTPQRVKSLAEIFVVQAAIGNYFTAILSR 280

Query: 449 RGRLF--GFGDNERAQLGHDTLRGCLEPTEIF 478
            GR++   +G++ER  LGH T   C  P  + 
Sbjct: 281 EGRVYTLSWGNDER--LGHQTDHSCSLPQPLL 310



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 112/259 (43%), Gaps = 19/259 (7%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           Q  AG   +  +T +G V++ G N  GQLG G T D   P  +  L  +  ++Q A    
Sbjct: 161 QALAGPGHSIAVTSKGVVYSFGFNGSGQLGQGTTQDSWQPLPVRSLNGI-RIIQAAISTD 219

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHV 336
               ++  G VY+FG     C     + +  + + I T +R      I VV+ + G+   
Sbjct: 220 RTFVISDAGEVYAFG---KVCFSEA-KLEVPETKLITTPQRVKSLAEIFVVQAAIGNYFT 275

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLV--D 393
             L   G VYT   G    LGH  +   +LP+PL  +L++   VQ+ A       L    
Sbjct: 276 AILSREGRVYTLSWGNDERLGHQTDHSCSLPQPLLGALENIPVVQIAAGFCYLLALAFQP 335

Query: 394 TG-SVYGFGWMGFGSLGF--PDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTD 448
           TG SVY  G    G LG    D   S+K   PR++      ++    +S G +H  VV  
Sbjct: 336 TGMSVYSVGCGLGGKLGHGLSDSDASEKY--PRLIKKFGLLNIEPVMVSAGPWHAAVVGK 393

Query: 449 RGRLFGFGDNERAQLGHDT 467
            GR+  +G      LGH T
Sbjct: 394 DGRVCTWGWGRFGCLGHGT 412


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 173/352 (49%), Gaps = 15/352 (4%)

Query: 128 SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVF 186
               +F  GS++ G LG G    + +   R ++F  AA + Q++  EN+   + Q G+++
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 187 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
           +CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSNT 
Sbjct: 84  SCGNNDYGQLGHEKGRK---RLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTE 140

Query: 247 GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           GQLG +       +P+ +  L     VVQIA G  +  A+T NG +YS+GS S   LG G
Sbjct: 141 GQLGLNSKNFMESSPRMVKTLG-TSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLG 199

Query: 306 -EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
            +   E++P+ I  F   GI +  ++ G  H +A+  SG V+ WGK   G LG  D  D+
Sbjct: 200 TDIKYEIKPKFISAFI--GIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDR 257

Query: 365 TLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G +   + PR
Sbjct: 258 NLPCQLQTLQNAKICYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNSNEILPR 313

Query: 424 ILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +  L    V+QIS G  HT+ +V  RGR++ +G     QLG+ + R    P
Sbjct: 314 QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTP 365



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 138/306 (45%), Gaps = 15/306 (4%)

Query: 110 SAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGH--GPETTQCVS-FTRINFPSAAH 165
            A    QI  G  +T++I+    ++SCG++  G LGH  G +  Q +       F  AA 
Sbjct: 59  KAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIPGLDAFVFKKAA- 117

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
                    H   + + GQ+F+ G N+    G    N     PR+V+ L      Q+  G
Sbjct: 118 -----CGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACG 172

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           +     LT  G +++ GSN+ GQLG G D      PK I+    +  +  IA G  + +A
Sbjct: 173 MKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGI-PIAFIACGGYHSIA 231

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           ++ +G V+ +G  +   LG  +  D   P  +QT +   I     + G+E  V L   G 
Sbjct: 232 ISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI--CYAACGEEFSVFLTVDGG 289

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWM 403
           V+T G G  G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G  
Sbjct: 290 VFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLG 349

Query: 404 GFGSLG 409
           G G LG
Sbjct: 350 GAGQLG 355



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 118/251 (47%), Gaps = 5/251 (1%)

Query: 120 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           G YHTL I+    +FS GS+  G LG   +     S   +     + VVQ++    HA  
Sbjct: 119 GAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFA 178

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           +  +G++++ G NS    G     +   +P+ + A  G+P   +  G   +  ++  G V
Sbjct: 179 LTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
              G NT GQLG  DT DR  P  +  L+    +   A G  + + +T +G V++ G+G 
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQN-AKICYAACGEEFSVFLTVDGGVFTCGAGM 297

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 357
              LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 298 YGQLGHGSNSNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 355

Query: 358 HGDEIDKTLPE 368
           +      T P+
Sbjct: 356 NHSTRSVTTPQ 366



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YH++ IS S +VF  G +  G LG      + +   ++     A +   +  E  
Sbjct: 222 IACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLP-CQLQTLQNAKICYAACGEEF 280

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 234
           + F+   G VFTCG       GH   +  I  PR V  L G    Q++ G   T   +  
Sbjct: 281 SVFLTVDGGVFTCGAGMYGQLGHGSNSNEIL-PRQVMELMGSTVTQISCGKRHTLALVPS 339

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           RG V+  G    GQLG+  T    TP+ +
Sbjct: 340 RGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 177/352 (50%), Gaps = 13/352 (3%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +V+S G    G LG G  + Q      I+  +   +VQ++    H   + + G+V+T G 
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVP-IDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
                 GH D N   F PRLVE L+G   +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQH 308
           HG+     TP  +  L+ +  V Q+A G  + + +  N  VY++G   N   GHG  E H
Sbjct: 120 HGNETGHSTPYLVETLKSM-QVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGH 178

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
             L P  ++  R K I  V++SA   H  AL   G V+T+G+G  G LGH  E ++ +  
Sbjct: 179 QYL-PCPVEELRGKSI--VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            + +L      QV      T  + +TG VY +G    G LG  D+ V+  V  P  ++SL
Sbjct: 236 FVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK-VNKTV--PTRVESL 292

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCL-EPTEIF 478
               V QI+ G  HTV +TD G ++ +G+ +  +LGH DT +  L +P ++ 
Sbjct: 293 LEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVL 344



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 149/312 (47%), Gaps = 14/312 (4%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCG 141
           L   +  WK V R ++         E    N  Q+T G YHT  ++ S  +++ G  + G
Sbjct: 66  LGHGDNGWKFVPRLVE---------ELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYG 116

Query: 142 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 201
            LGHG ET     +  +    +  V QV+    H   +L++  V+T GD  +   GH DT
Sbjct: 117 KLGHGNETGHSTPYL-VETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDT 175

Query: 202 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
               + P  VE L+G    Q++A    T  L+  G V T G    G+LGH    ++P  +
Sbjct: 176 EGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
            +  L     V Q+A G  +  AVT  G VY++G G +  LGHG++ ++  P  +++   
Sbjct: 236 FVDALAG-KRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLE 294

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           K   V++++ G  H V L  +G VYTWG G  G LGH D    TLP+P+  L     + V
Sbjct: 295 K--LVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISV 352

Query: 382 CARKRKTFVLVD 393
            +    T  LVD
Sbjct: 353 ASYNEHTVALVD 364



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 126/245 (51%), Gaps = 7/245 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V++ G    GQLG GDT D+  P  I  L E   +VQIA G  + + +T  G VY++G G
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAER-RIVQIACGSGHTVVLTEEGEVYTWGRG 61

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
            +  LGHG+   +  PR ++  R K I   +V+ G  H  A+  SG +YTWG G  G LG
Sbjct: 62  DDGRLGHGDNGWKFVPRLVEELRGKNIR--QVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           HG+E   + P  + +LKS    QV    R T VL++   VY +G    G  G  D     
Sbjct: 120 HGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGD--TEG 177

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  ++ LR   + QIS   +HT  +++ G +F FG+ +  +LGH++ R   +P   
Sbjct: 178 HQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERN--QPVAR 235

Query: 478 FIQEM 482
           F+  +
Sbjct: 236 FVDAL 240


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 174/353 (49%), Gaps = 13/353 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  HT+ L+S   V S G    G LGHG    + +    I   +   +  V+   +H
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRI-IGALNDCEISLVACGADH 68

Query: 176 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
             A+      +++ G       GH +++  +F P  ++AL+G+  +Q+  G +    +T 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSD-LFVPHPIKALQGLEIRQIACGDSHCLAVTA 127

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V++ G N +GQLG GDT D   P  +   E V SV  +AAG  +  AVT +G +Y +
Sbjct: 128 DGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGV-SVKMLAAGAEHTAAVTDSGKLYGW 186

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G++ D + P  +     +   +  V+ G  H +A+  SG +YT+G    G
Sbjct: 187 GWGRYGNLGLGDRGDRMLPAEVPAVGDE--KMCMVACGWRHTIAVSQSGKLYTYGWSKYG 244

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D  LP  +++L      QV    R T  L + G +YG+GW  FG +G  D  
Sbjct: 245 QLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD-- 302

Query: 415 VSDKVLRPRILDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             D    P+++ S+   H  V Q+S G  HTV VTD+  ++ +G     QLGH
Sbjct: 303 -VDDHTSPQLI-SIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGH 353



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 132/257 (51%), Gaps = 7/257 (2%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           V+AG + T  L     V + G    GQLGHGD  DR  P+ I  L +   +  +A G  +
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDC-EISLVACGADH 68

Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             A +   + +YS+G G    LGHG   D   P  I+    +G+ + +++ GD H +A+ 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKAL--QGLEIRQIACGDSHCLAVT 126

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           + G VY+WG+   G LG GD  D  +P  L + +      + A    T  + D+G +YG+
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGW 186

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DRG  D++L P  + ++    +  ++ G  HT+ V+  G+L+ +G ++ 
Sbjct: 187 GWGRYGNLGLGDRG--DRML-PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH      L P ++
Sbjct: 244 GQLGHGDYADHLLPHQV 260



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 8/299 (2%)

Query: 117 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +  G  HT   S +  +++S G    G LGHG  +   V    I       + Q++  ++
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP-IKALQGLEIRQIACGDS 120

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   V   G+V++ G N +   G  DT+  +   +L+ A +GV  K + AG   T  +T 
Sbjct: 121 HCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLL-AFEGVSVKMLAAGAEHTAAVTD 179

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++  G   +G LG GD  DR  P  +  + +   +  +A G  + +AV+ +G +Y++
Sbjct: 180 SGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDE-KMCMVACGWRHTIAVSQSGKLYTY 238

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      LGHG+  D L P  +        ++ +VS G  H VAL  +G +Y WG    G
Sbjct: 239 GWSKYGQLGHGDYADHLLPHQVAALAE--FNITQVSGGWRHTVALTEAGKLYGWGWNKFG 296

Query: 355 ALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            +G GD  D T P+ +S    H   VQV    R T  + D  +VY +G    G LG  D
Sbjct: 297 QVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGD 355



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L + ++  V+S G +  G LG G      V    + F   + V  ++A   
Sbjct: 114 QIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS-VKMLAAGAE 172

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V  SG+++  G       G  D    +  P  V A+       V  G   T  ++ 
Sbjct: 173 HTAAVTDSGKLYGWGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVSQ 231

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++T G + +GQLGHGD  D   P  +A L E  ++ Q++ G  + +A+T  G +Y +
Sbjct: 232 SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF-NITQVSGGWRHTVALTEAGKLYGW 290

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVALDSSGYVYTWGKGY 352
           G      +G G+  D   P+ I      G H  VV+VS G  H VA+     VY+WG+G 
Sbjct: 291 GWNKFGQVGSGDVDDHTSPQLISI---PGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGT 347

Query: 353 CGALGHGDEIDKTLPEPLSSLKS 375
            G LGHGD +D++ P+ + +L +
Sbjct: 348 SGQLGHGDAVDRSAPKGIQALSA 370



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 3/208 (1%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  +++S  ++  G    G LG G    + +    +       +  V+    H
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLP-AEVPAVGDEKMCMVACGWRH 225

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V QSG+++T G +     GH D    +  P  V AL      QV+ G   T  LT  
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G ++  G N  GQ+G GD  D  +P+ I+   +   VVQ++ G  + +AVT    VYS+G
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            G++  LGHG+  D   P+ IQ     G
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQALSADG 372



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 4/157 (2%)

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCAR 384
           V+ VSAG  H VAL S   V ++G+G  G LGHGD  D+ LP  + +L    +++  C  
Sbjct: 7   VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGA 66

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              T       ++Y +GW  FG LG    G S  +  P  + +L+   + QI+ G  H +
Sbjct: 67  DHTTAYSATRLTIYSWGWGDFGRLG---HGNSSDLFVPHPIKALQGLEIRQIACGDSHCL 123

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            VT  G ++ +G N+  QLG       L P ++   E
Sbjct: 124 AVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFE 160



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 13/181 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT+ +S S  +++ G S  G LGHG      +   ++   +  ++ QVS    H
Sbjct: 219 VACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPH-QVAALAEFNITQVSGGWRH 277

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNFTG 230
              + ++G+++  G N     G  D +     P+L+     +P +     QV+ G   T 
Sbjct: 278 TVALTEAGKLYGWGWNKFGQVGSGDVDDHT-SPQLIS----IPGQHQRVVQVSCGWRHTV 332

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            +T + +V++ G  T GQLGHGD +DR  PK I  L   GS  +     S   AVTG+GV
Sbjct: 333 AVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALSADGSACE-GLEKSPEPAVTGSGV 391

Query: 291 V 291
            
Sbjct: 392 A 392


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 156/313 (49%), Gaps = 9/313 (2%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+ VSA  +H+  +L    V + G       GH DT+  +F P  + AL G     VT G
Sbjct: 16  VLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLF-PTKLSALDGQDIICVTCG 74

Query: 226 LNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            + T   +  G  V++ G    G+LGHGD  D   P  I  L+ +  + QIA G S+ LA
Sbjct: 75  ADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGL-MIQQIACGDSHCLA 133

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT +  V S+G   N  LG G   D L P+ IQ F    I +  V+AG EH VA+   G 
Sbjct: 134 VTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEE--IPIKMVAAGAEHSVAITKDGN 191

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +Y WG G  G LG GD  D+ LPE ++     +A+  C   R T  +  +G +Y  GW  
Sbjct: 192 LYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAMVACGW-RHTICVSSSGGLYTNGWGK 250

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +G LG  D    +  L PR + +L    +SQ+S G  H++ +T  G+L G+G N+  Q+G
Sbjct: 251 YGQLGHGDF---EDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIG 307

Query: 465 HDTLRGCLEPTEI 477
                 C  P ++
Sbjct: 308 VGNNFDCCSPMQV 320



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 172/351 (49%), Gaps = 11/351 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  H++ L+S + V S G    G LGHG +T   +  T+++      ++ V+   +H
Sbjct: 19  VSAGASHSVALLSGNVVCSWGRGEDGQLGHG-DTDDRLFPTKLSALDGQDIICVTCGADH 77

Query: 176 AAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
                +SG+ V++ G       GH D +  +  P  ++AL+G+  +Q+  G +    +T+
Sbjct: 78  TMARSESGRDVYSWGWGDFGRLGHGD-HSDLLIPHPIKALQGLMIQQIACGDSHCLAVTM 136

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
              V + G N +G+LG G   D   P+ I   EE+  +  +AAG  + +A+T +G +Y +
Sbjct: 137 DSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEI-PIKMVAAGAEHSVAITKDGNLYGW 195

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G+++D L P  +      G  +  V+ G  H + + SSG +YT G G  G
Sbjct: 196 GWGRYGNLGLGDRNDRLLPEKVTV---DGDKMAMVACGWRHTICVSSSGGLYTNGWGKYG 252

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D  +P  + +L      QV    R +  L  +G + G+GW  FG +G    G
Sbjct: 253 QLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGV---G 309

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            +     P  ++      V  IS G  HT+ VT+R  ++ +G     QLG+
Sbjct: 310 NNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGN 360



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V+ ++AG S+ +A+    VV S+G G +  LGHG+  D L P  +      G  ++ V+ 
Sbjct: 16  VLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSAL--DGQDIICVTC 73

Query: 332 GDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           G +H +A   SG  VY+WG G  G LGHGD  D  +P P+ +L+  +  Q+         
Sbjct: 74  GADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHCLA 133

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +     V  +G    G LG    G ++  L P+ +       +  ++ G  H+V +T  G
Sbjct: 134 VTMDSQVLSWGRNQNGELGL---GTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDG 190

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
            L+G+G      LG       L P ++ +
Sbjct: 191 NLYGWGWGRYGNLGLGDRNDRLLPEKVTV 219



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 124/305 (40%), Gaps = 60/305 (19%)

Query: 117 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +T G  HT+  S S   V+S G    G LGHG  +   +    I       + Q++  ++
Sbjct: 71  VTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHP-IKALQGLMIQQIACGDS 129

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   V    QV + G N +   G   T      P+ ++  + +P K V AG   +  +T 
Sbjct: 130 HCLAVTMDSQVLSWGRNQNGELG-LGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITK 188

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G+++  G   +G LG GD  DR  P+ +    +   +  +A G  + + V+ +G +Y+ 
Sbjct: 189 DGNLYGWGWGRYGNLGLGDRNDRLLPEKVTV--DGDKMAMVACGWRHTICVSSSGGLYTN 246

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY---------- 344
           G G    LGHG+  D L PR +Q    K   + +VS G  H +AL SSG           
Sbjct: 247 GWGKYGQLGHGDFEDHLVPRKVQALSDK--FISQVSGGWRHSMALTSSGQLLGWGWNKFG 304

Query: 345 ------------------------------------------VYTWGKGYCGALGHGDEI 362
                                                     VY+WG+G  G LG+G+ I
Sbjct: 305 QIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETI 364

Query: 363 DKTLP 367
           D+ +P
Sbjct: 365 DRNVP 369



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 83/174 (47%), Gaps = 8/174 (4%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           DE+        RR    V+ VSAG  H VAL S   V +WG+G  G LGHGD  D+  P 
Sbjct: 3   DEVMSEVAAPPRR----VLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPT 58

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
            LS+L     + V      T    ++G  VY +GW  FG LG  D      +L P  + +
Sbjct: 59  KLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDH---SDLLIPHPIKA 115

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           L+   + QI+ G  H + VT   ++  +G N+  +LG  T    L P +I I E
Sbjct: 116 LQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFE 169



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 7/209 (3%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H++ I+ + +++  G    G LG G    + +   ++       +  V+    H
Sbjct: 176 VAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLP-EKVTV-DGDKMAMVACGWRH 233

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G       GH D    +  PR V+AL      QV+ G   +  LT  
Sbjct: 234 TICVSSSGGLYTNGWGKYGQLGHGDFEDHLV-PRKVQALSDKFISQVSGGWRHSMALTSS 292

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G +   G N  GQ+G G+  D  +P  +  P ++   V  I+ G  + +AVT    VYS+
Sbjct: 293 GQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQ--KVQMISCGWRHTIAVTERENVYSW 350

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LG+GE  D   P  I+ F   G
Sbjct: 351 GRGANGQLGNGETIDRNVPTIIEAFSVDG 379



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 4/168 (2%)

Query: 109 TSAGNQM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 166
           T  G++M  +  G  HT+ +S+S  +++ G    G LGHG      V   ++   S   +
Sbjct: 218 TVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVP-RKVQALSDKFI 276

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            QVS    H+  +  SGQ+   G N     G    N     P  V        + ++ G 
Sbjct: 277 SQVSGGWRHSMALTSSGQLLGWGWNKFGQIG-VGNNFDCCSPMQVNFPHDQKVQMISCGW 335

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
             T  +T R +V++ G   +GQLG+G+T+DR  P  I      GS  Q
Sbjct: 336 RHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIEAFSVDGSSGQ 383


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 176/369 (47%), Gaps = 27/369 (7%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI----NFPSAAHVVQVSA 171
           I+ G  H++ L+S   V S G    G LGHG    + V         + P     V +  
Sbjct: 25  ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICG 84

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           +++  A+  +  Q+++ G       GH +++  +F P+ ++AL+GV   Q+  G +    
Sbjct: 85  ADHTTAYSDEELQLYSWGWGDFGRLGHGNSSD-VFNPQPIQALQGVRITQIACGDSHCLA 143

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +T+ GHVH+ G N +GQLG G+T D   P+ I   E V  V  IAAG  +  AVT +G +
Sbjct: 144 VTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGV-RVKMIAAGAEHTAAVTEDGDL 202

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y +G G    LG G++ D L P  + +    G  +V V+ G  H + + SSG +YT+G  
Sbjct: 203 YGWGWGRYGNLGLGDRDDRLIPEKVSSV--NGQKMVLVACGWRHTITVSSSGSIYTYGWS 260

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG---------------S 396
             G LGHGD  D  +P  L +LK     Q  A +   F L D G                
Sbjct: 261 KYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGK 320

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           +YG+GW  FG +G  D   ++    P  ++      V Q++ G  HT+ +T+   +F +G
Sbjct: 321 LYGWGWNKFGQVGVGD---NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWG 377

Query: 457 DNERAQLGH 465
                QLGH
Sbjct: 378 RGTSGQLGH 386



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 152/319 (47%), Gaps = 27/319 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPI---FRPRLVEALKGVPCKQ 221
           VV +SA  +H+  +L  G V + G       GH D  +RP+         +A  GV    
Sbjct: 22  VVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVV 81

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           +    + T +      +++ G    G+LGHG++ D   P+ I  L+ V  + QIA G S+
Sbjct: 82  ICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGV-RITQIACGDSH 140

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            LAVT  G V+S+G   N  LG G   D L P+ IQ F  +G+ V  ++AG EH  A+  
Sbjct: 141 CLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAF--EGVRVKMIAAGAEHTAAVTE 198

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G +Y WG G  G LG GD  D+ +PE +SS+     V V    R T  +  +GS+Y +G
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYG 258

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST----------------GLYHTVV 445
           W  +G LG  D    +  L P  L++L+   +SQ                   G     +
Sbjct: 259 WSKYGQLGHGDF---EDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWAL 315

Query: 446 VTDRGRLFGFGDNERAQLG 464
             D G+L+G+G N+  Q+G
Sbjct: 316 AAD-GKLYGWGWNKFGQVG 333



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 12/273 (4%)

Query: 212 EALKGVPCKQV---TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLE 267
           EA+   P + V   +AG + +  L   G V + G    GQLGHGD  DRP P  + A  +
Sbjct: 12  EAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFD 71

Query: 268 EV--GSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
           +   G    +  G  +  A +   + +YS+G G    LGHG   D   P+ IQ    +G+
Sbjct: 72  DAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQAL--QGV 129

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
            + +++ GD H +A+  +G+V++WG+   G LG G+  D  LP+ + + +      + A 
Sbjct: 130 RITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRVKMIAAG 189

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              T  + + G +YG+GW  +G+LG  DR   D  L P  + S+    +  ++ G  HT+
Sbjct: 190 AEHTAAVTEDGDLYGWGWGRYGNLGLGDR---DDRLIPEKVSSVNGQKMVLVACGWRHTI 246

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            V+  G ++ +G ++  QLGH      L P ++
Sbjct: 247 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKL 279



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 148/327 (45%), Gaps = 21/327 (6%)

Query: 117 ITTGRYHTLLISNSSV--FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +  G  HT   S+  +  +S G    G LGHG  ++   +   I       + Q++  ++
Sbjct: 81  VICGADHTTAYSDEELQLYSWGWGDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDS 139

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   V  +G V + G N +   G  +T   +  P+ ++A +GV  K + AG   T  +T 
Sbjct: 140 HCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL-PQKIQAFEGVRVKMIAAGAEHTAAVTE 198

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++  G   +G LG GD  DR  P+ ++ +     +V +A G  + + V+ +G +Y++
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQ-KMVLVACGWRHTITVSSSGSIYTY 257

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFR------RKGIHVVRVSAGDEHV-------VALDS 341
           G      LGHG+  D L P  ++  +       + + ++    GDE          AL +
Sbjct: 258 GWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAA 317

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G +Y WG    G +G GD  D   P  ++       VQV    R T  L +  +V+ +G
Sbjct: 318 DGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWG 377

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSL 428
               G LG  +  + D+ + P+++D+L
Sbjct: 378 RGTSGQLGHGE--IVDRNI-PKMIDAL 401



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 25/278 (8%)

Query: 116 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L ++ +  V S G +  G LG G  T   +   +I       V  ++A   
Sbjct: 133 QIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAE 191

Query: 175 HAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           H A V + G ++  G     +   G RD +R I  P  V ++ G     V  G   T  +
Sbjct: 192 HTAAVTEDGDLYGWGWGRYGNLGLGDRD-DRLI--PEKVSSVNGQKMVLVACGWRHTITV 248

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA--------------- 277
           +  G ++T G + +GQLGHGD  D   P  +  L++  ++ Q  A               
Sbjct: 249 SSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDT-TISQEEAVELIFFFLGDEGFRV 307

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G     A+  +G +Y +G      +G G+  D   P  +Q        VV+V+ G  H +
Sbjct: 308 GGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSP--VQVNFPNEQKVVQVACGWRHTL 365

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           AL  +  V++WG+G  G LGHG+ +D+ +P+ + +L S
Sbjct: 366 ALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSS 403



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 21/224 (9%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ +  ++  G    G LG G    + +   +++  +   +V V+    H
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIP-EKVSSVNGQKMVLVACGWRH 244

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA----------- 224
              V  SG ++T G +     GH D    +  P  +EALK     Q  A           
Sbjct: 245 TITVSSSGSIYTYGWSKYGQLGHGDFEDHLV-PHKLEALKDTTISQEEAVELIFFFLGDE 303

Query: 225 ----GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGP 279
               G      L   G ++  G N  GQ+G GD  D  +P  +  P E+   VVQ+A G 
Sbjct: 304 GFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQ--KVVQVACGW 361

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            + LA+T    V+S+G G++  LGHGE  D   P+ I      G
Sbjct: 362 RHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDG 405



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 20/175 (11%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV- 167
           +  G  HT+ +S+S S+++ G S  G LGHG       P   + +  T I+   A  ++ 
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIF 297

Query: 168 --------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
                   +V      A  +   G+++  G N     G  D N     P  V        
Sbjct: 298 FFLGDEGFRVGGGIQWA--LAADGKLYGWGWNKFGQVGVGD-NEDHCSPVQVNFPNEQKV 354

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            QV  G   T  LT   +V + G  T GQLGHG+ +DR  PK I  L   GS  +
Sbjct: 355 VQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACK 409


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 171/353 (48%), Gaps = 14/353 (3%)

Query: 131 SVFSCGSSLCGVLG---HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
           + F  GSS+ G LG    G +TTQ V+   +   S   V  +S  ++H   VL  G ++ 
Sbjct: 2   ATFCWGSSMEGQLGIGITGGQTTQEVA-KEVTTLSGQRVQSISCGKHHTGIVLDDGTLYM 60

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
           CG NS    G    +R  ++P  V AL+ V  K V  G + T  ++ RG V   G N  G
Sbjct: 61  CGANSK---GQLGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRG 117

Query: 248 Q--LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           Q  L  GD  ++P P+ +  L      V++  G  + +A+T +G ++S+G  +   LG G
Sbjct: 118 QCGLATGDIENKPRPRILKHLASY-QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIG 176

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
                   R  +    +G+ +VRV+ G  H  AL  SG V+ WGK   G LG G++ +K 
Sbjct: 177 TLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKA 236

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            P  L +++S +   +   +  T +L   G V+ FG    G LG    G +   + PR +
Sbjct: 237 YPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLG---HGSNYNEVNPRKV 293

Query: 426 DSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             L    ++Q++ G +HT+V+   +GRL+ FG     QLG D  R C  P  +
Sbjct: 294 IDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 346



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 179/406 (44%), Gaps = 46/406 (11%)

Query: 106 IVETSAGNQMQITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 163
           +++    +  Q+T G++HTL++  S   +++ G  + G LG   E   C +  R+  P  
Sbjct: 293 VIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQD-EARSCSNPQRVPGPWV 351

Query: 164 AHVVQVSASENHAAFVLQSGQVFTC---------------GDNSSFCCGHRDTNRPIF-- 206
            H    S++E +++     G+V  C                D+       RD +  IF  
Sbjct: 352 PH----SSTEKNSS---SKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDISTRIFFQ 404

Query: 207 ------------RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHG 252
                              L+ V  K V  G + T  ++ R  V   G N  GQ  L  G
Sbjct: 405 LTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATG 464

Query: 253 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 312
           D  ++P P+ +  L      V++  G  + +A+T +G ++S+G  +   LG G       
Sbjct: 465 DIENKPRPRILRHLASY-QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYT 523

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
            R  +    +G+ +VRV+ G  H  AL  SG V+ WGK   G LG G++ +K+ P  L +
Sbjct: 524 DRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRN 583

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           ++S +   +   +  T +L   G V+ FG    G LG    G +   + PR +  L    
Sbjct: 584 MRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLG---HGSNYNEVNPRKVIDLMGSD 640

Query: 433 VSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           ++Q++ G +HT+V+   +GRL+ FG     QLG D  R C  P  +
Sbjct: 641 ITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 173/353 (49%), Gaps = 13/353 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  HT+ L+S   V S G    G LGHG    + +    I   +   +  V+   +H
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRI-IGALNDCEISLVACGADH 68

Query: 176 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
             A+      +++ G       GH +++  +F P  ++AL+G+  +Q+  G +    +T 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSD-LFVPHPIKALQGLEIRQIACGDSHCLAVTA 127

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V++ G N +GQLG GDT D   P  +   E V SV  +AAG  +  AVT  G +Y +
Sbjct: 128 DGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGV-SVKMLAAGAEHTAAVTDGGKLYGW 186

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G++ D + P  +     +   +  V+ G  H +A+  SG +YT+G    G
Sbjct: 187 GWGRYGNLGLGDRGDRMLPAEVPAVGDE--KMCMVACGWRHTIAVSQSGKLYTYGWSKYG 244

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D  LP  +++L      QV    R T  L + G +YG+GW  FG +G  D  
Sbjct: 245 QLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGD-- 302

Query: 415 VSDKVLRPRILDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             D    P+++ S+   H  V Q+S G  HTV VTD+  ++ +G     QLGH
Sbjct: 303 -VDDHTSPQLI-SIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGH 353



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 131/257 (50%), Gaps = 7/257 (2%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           V+AG + T  L     V + G    GQLGHGD  DR  P+ I  L +   +  +A G  +
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDC-EISLVACGADH 68

Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             A +   + +YS+G G    LGHG   D   P  I+    +G+ + +++ GD H +A+ 
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKAL--QGLEIRQIACGDSHCLAVT 126

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           + G VY+WG+   G LG GD  D  +P  L + +      + A    T  + D G +YG+
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGW 186

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DRG  D++L P  + ++    +  ++ G  HT+ V+  G+L+ +G ++ 
Sbjct: 187 GWGRYGNLGLGDRG--DRML-PAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKY 243

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH      L P ++
Sbjct: 244 GQLGHGDYADHLLPHQV 260



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 138/299 (46%), Gaps = 8/299 (2%)

Query: 117 ITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +  G  HT   S +  +++S G    G LGHG  +   V    I       + Q++  ++
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP-IKALQGLEIRQIACGDS 120

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   V   G+V++ G N +   G  DT+  +  P  + A +GV  K + AG   T  +T 
Sbjct: 121 HCLAVTADGEVYSWGRNQNGQLGLGDTDDSLV-PHKLLAFEGVSVKMLAAGAEHTAAVTD 179

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++  G   +G LG GD  DR  P  +  + +   +  +A G  + +AV+ +G +Y++
Sbjct: 180 GGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDE-KMCMVACGWRHTIAVSQSGKLYTY 238

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      LGHG+  D L P  +        ++ +VS G  H VAL  +G +Y WG    G
Sbjct: 239 GWSKYGQLGHGDYADHLLPHQVAALAE--FNITQVSGGWRHTVALTEAGKLYGWGWNKFG 296

Query: 355 ALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            +G GD  D T P+ +S    H   VQV    R T  + D  +VY +G    G LG  D
Sbjct: 297 QVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGD 355



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H L + ++  V+S G +  G LG G      V    + F   + V  ++A   
Sbjct: 114 QIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVS-VKMLAAGAE 172

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V   G+++  G       G  D    +  P  V A+       V  G   T  ++ 
Sbjct: 173 HTAAVTDGGKLYGWGWGRYGNLGLGDRGDRML-PAEVPAVGDEKMCMVACGWRHTIAVSQ 231

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++T G + +GQLGHGD  D   P  +A L E  ++ Q++ G  + +A+T  G +Y +
Sbjct: 232 SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF-NITQVSGGWRHTVALTEAGKLYGW 290

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH--VVRVSAGDEHVVALDSSGYVYTWGKGY 352
           G      +G G+  D   P+ I      G H  VV+VS G  H VA+     VY+WG+G 
Sbjct: 291 GWNKFGQVGSGDVDDHTSPQLISI---PGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGT 347

Query: 353 CGALGHGDEIDKTLPEPLSSLKS 375
            G LGHGD +D++ P+ + +L +
Sbjct: 348 SGQLGHGDAVDRSAPKGIQALSA 370



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 3/208 (1%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  +++   ++  G    G LG G    + +    +       +  V+    H
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLP-AEVPAVGDEKMCMVACGWRH 225

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V QSG+++T G +     GH D    +  P  V AL      QV+ G   T  LT  
Sbjct: 226 TIAVSQSGKLYTYGWSKYGQLGHGDYADHLL-PHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G ++  G N  GQ+G GD  D  +P+ I+   +   VVQ++ G  + +AVT    VYS+G
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            G++  LGHG+  D   P+ IQ     G
Sbjct: 345 RGTSGQLGHGDAVDRSAPKGIQALSADG 372



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 4/157 (2%)

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCAR 384
           V+ VSAG  H VAL S   V ++G+G  G LGHGD  D+ LP  + +L    +++  C  
Sbjct: 7   VLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGA 66

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              T       ++Y +GW  FG LG    G S  +  P  + +L+   + QI+ G  H +
Sbjct: 67  DHTTAYSATRLTIYSWGWGDFGRLG---HGNSSDLFVPHPIKALQGLEIRQIACGDSHCL 123

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            VT  G ++ +G N+  QLG       L P ++   E
Sbjct: 124 AVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFE 160



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT+ +S S  +++ G S  G LGHG      +   ++   +  ++ QVS    H
Sbjct: 219 VACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPH-QVAALAEFNITQVSGGWRH 277

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNFTG 230
              + ++G+++  G N     G  D +     P+L+     +P +     QV+ G   T 
Sbjct: 278 TVALTEAGKLYGWGWNKFGQVGSGDVDDHT-SPQLIS----IPGQHQRVVQVSCGWRHTV 332

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            +T + +V++ G  T GQLGHGD +DR  PK I  L   G   +     S   AVTG+GV
Sbjct: 333 AVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALSADGKACE-GLEKSPEPAVTGSGV 391

Query: 291 V 291
            
Sbjct: 392 A 392


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 163/362 (45%), Gaps = 8/362 (2%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  H+L L+SN    S G    G LGHG    +       +   A+     S +E  
Sbjct: 19  VSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYS 78

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            A      +V++ G       GH D N  +F P+ + AL G    +V  G   T  +T  
Sbjct: 79  VALSQPRNEVYSWGWGDFGRLGHGDCND-VFIPQPIRALAGRNIVKVACGDTHTLAVTDT 137

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G + + G N +GQLG G T D   P+ +  L     V  IA G  + LA T  G V+++G
Sbjct: 138 GELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQ-EVTSIACGGEHSLAATSAGDVFAWG 196

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G    LG G   D   P  +     +G+ V  V+ G  H +A D +G VYT+G    G 
Sbjct: 197 WGRYGNLGVGPPEDRHLPSQVHGL--EGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQ 254

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LGHGD ID+ +P+ + SLK    V +    R T    D+G +Y +GW  FG LG    G 
Sbjct: 255 LGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGI---GS 311

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           +     P  +  L    V  +S G  HT  VT+ G +F +G     QLGH+  +    P 
Sbjct: 312 NTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPV 371

Query: 476 EI 477
            +
Sbjct: 372 RL 373



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 10/264 (3%)

Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N +++  G  HTL ++++  +FS G +  G LG G  T+  +    +       V  ++ 
Sbjct: 120 NIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLG-TTSDAILPQPVESLRGQEVTSIAC 178

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFT 229
              H+     +G VF  G       G+     P  R  P  V  L+GV    V  G   +
Sbjct: 179 GGEHSLAATSAGDVFAWGWGR---YGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHS 235

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
                 G V+T G + +GQLGHGD +D+  PK++  L++   +V IA G  +  A   +G
Sbjct: 236 IAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKD-SRIVLIAGGWRHTSAADDSG 294

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            +YS+G      LG G   D   P  +Q      + ++  S G  H  A+  +G V++WG
Sbjct: 295 KLYSWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLL--SCGWRHTFAVTEAGDVFSWG 352

Query: 350 KGYCGALGHGDEIDKTLPEPLSSL 373
           +G  G LGH +  D   P  L+ L
Sbjct: 353 RGVNGQLGHNEPKDTNAPVRLAEL 376



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 6/175 (3%)

Query: 318 TFRR--KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           TFR     + V  VS G  H +AL S+G   +WG+G  G LGHGD  ++  P  +  L  
Sbjct: 6   TFRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQ 65

Query: 376 HLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
                VC+    +  L      VY +GW  FG LG  D    + V  P+ + +L   ++ 
Sbjct: 66  ASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGD---CNDVFIPQPIRALAGRNIV 122

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
           +++ G  HT+ VTD G LF FG N+  QLG  T    + P  +     +E T +A
Sbjct: 123 KVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIA 177


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 173/353 (49%), Gaps = 11/353 (3%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +V+S G    G LG G  + Q      I+  +   +VQ++    H   +   G+V+T G 
Sbjct: 2   TVYSWGRGEDGQLGLGDTSDQHRPVP-IDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
                 GH D N   F PRLVE L+G   +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQH 308
           HG+     TP  +  L+ +  V Q+A G  + + +  N  VY++G   N   GHG  E H
Sbjct: 120 HGNETGHSTPFLVETLKGM-QVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEGH 178

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
             L P  ++  R K I  V++SA   H  AL   G V+T+G+G  G LGH  E ++ +  
Sbjct: 179 QYL-PCPVEELRGKNI--VQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            + +L      QV      T  + +TG VY +G    G LG  D+ V+  V  P  ++SL
Sbjct: 236 FVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDK-VNKTV--PTRVESL 292

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
               V QI+ G  HTV +TD G ++ +G+ +  +LGH+       P  + + E
Sbjct: 293 VEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLE 345



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 149/312 (47%), Gaps = 14/312 (4%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCG 141
           L   +  WK V R ++         E    N  Q+T G YHT  ++ S  +++ G  + G
Sbjct: 66  LGHGDNGWKFVPRLVE---------ELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYG 116

Query: 142 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 201
            LGHG ET     F  +       V QV+    H   +L++  V+T GD  +   GH DT
Sbjct: 117 KLGHGNETGHSTPFL-VETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDT 175

Query: 202 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
               + P  VE L+G    Q++A    T  L+  G V T G    G+LGH    ++P  +
Sbjct: 176 EGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVAR 235

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
            +  L     V Q+A G  +  AVT  G VY++G G +  LGHG++ ++  P  +++   
Sbjct: 236 FVEALAG-KRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVE 294

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           K   VV+++ G  H VAL  +G VYTWG G  G LGH D    TLP+ +  L+    + V
Sbjct: 295 K--LVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKVTLPKLVDVLEGKRVISV 352

Query: 382 CARKRKTFVLVD 393
            +    T  LVD
Sbjct: 353 ASYNEHTVALVD 364



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/338 (33%), Positives = 166/338 (49%), Gaps = 14/338 (4%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI  G  HT+++++   V++ G    G LGHG    + V    +      ++ QV+   
Sbjct: 37  VQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVP-RLVEELRGKNIRQVTCGS 95

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H A V  SG ++T G       GH  +T      P LVE LKG+  +QV  G   T  L
Sbjct: 96  YHTAAVTVSGDLYTWGGGMYGKLGHGNETGHST--PFLVETLKGMQVRQVACGSRHTVVL 153

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGV 290
                V+T G   +G  GHGDT          P+EE+   ++VQI+A   +  A++  G 
Sbjct: 154 LENKDVYTWGDKENGVSGHGDTEGHQYLP--CPVEELRGKNIVQISACGFHTAALSEFGE 211

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V++FG G    LGH  + ++   R ++     G  V +V+ G  H  A+  +G VYTWG 
Sbjct: 212 VFTFGEGKFGRLGHNSERNQPVARFVEAL--AGKRVKQVACGGFHTAAVTETGEVYTWGG 269

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G  G LGHGD+++KT+P  + SL   L VQ+      T  L DTG VY +G    G LG 
Sbjct: 270 GEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGH 329

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
            D   + KV  P+++D L    V  +++   HTV + D
Sbjct: 330 ND---TTKVTLPKLVDVLEGKRVISVASYNEHTVALVD 364



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 7/245 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V++ G    GQLG GDT D+  P  I  L E   +VQIA G  + + +T  G VY++G G
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAER-RIVQIACGSGHTVVLTDEGEVYTWGRG 61

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
            +  LGHG+   +  PR ++  R K I   +V+ G  H  A+  SG +YTWG G  G LG
Sbjct: 62  DDGRLGHGDNGWKFVPRLVEELRGKNIR--QVTCGSYHTAAVTVSGDLYTWGGGMYGKLG 119

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           HG+E   + P  + +LK     QV    R T VL++   VY +G    G  G  D     
Sbjct: 120 HGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGD--TEG 177

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  ++ LR  ++ QIS   +HT  +++ G +F FG+ +  +LGH++ R   +P   
Sbjct: 178 HQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERN--QPVAR 235

Query: 478 FIQEM 482
           F++ +
Sbjct: 236 FVEAL 240


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 171/353 (48%), Gaps = 14/353 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H++ L+S + V + G    G LGHG +    +S T ++      ++ V    +H
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHG-DAQDRLSPTILSTLEGLEIISVICGADH 77

Query: 176 A-AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
             A+      V++ G       GH +++  +F P+ +  L G+  KQ+  G +    +T+
Sbjct: 78  TIAYSESHTDVYSWGWGDFGRLGHGNSS-DLFTPQPIRQLHGLKIKQIACGDSHCLAVTM 136

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N +GQLG G T D   P+ I   + V  +  +AAG  +  AVT +G +Y +
Sbjct: 137 EGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGV-PIKMVAAGAEHTAAVTEDGELYGW 195

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG G++ D L P  +      G  +V V+ G  H +++ SSG +YT+G    G
Sbjct: 196 GWGRYGNLGLGDRKDRLVPEKVSL--PHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYG 253

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD  D  +P  L +L+     Q+    R T  +   G +YG+GW  FG +     G
Sbjct: 254 QLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQV-----G 308

Query: 415 VSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           V D V R  P  +       V  IS G  HT+ VT+R  +F +G     QLG+
Sbjct: 309 VGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGN 361



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 7/257 (2%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           ++AG + +  L     V T G    GQLGHGD  DR +P  ++ LE +  ++ +  G  +
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGL-EIISVICGADH 77

Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            +A + +   VYS+G G    LGHG   D   P+ I+     G+ + +++ GD H +A+ 
Sbjct: 78  TIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLH--GLKIKQIACGDSHCLAVT 135

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G V +WG+   G LG G   D  +P+ + + +      V A    T  + + G +YG+
Sbjct: 136 MEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGW 195

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  DR   D+++ P  +       +  ++ G  HT+ V+  G L+ +G ++ 
Sbjct: 196 GWGRYGNLGLGDR--KDRLV-PEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKY 252

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH      L P ++
Sbjct: 253 GQLGHGDYADHLIPHQL 269



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 6/214 (2%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V+ I+AG S+ +A+    VV ++G G +  LGHG+  D L P  + T   +G+ ++ V  
Sbjct: 16  VLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTL--EGLEIISVIC 73

Query: 332 GDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           G +H +A  +S   VY+WG G  G LGHG+  D   P+P+  L      Q+         
Sbjct: 74  GADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLA 133

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V  +G    G LG    G ++  L P+ + + +   +  ++ G  HT  VT+ G
Sbjct: 134 VTMEGQVQSWGRNQNGQLGL---GTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDG 190

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
            L+G+G      LG    +  L P ++ +   E+
Sbjct: 191 ELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEK 224



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 132/313 (42%), Gaps = 59/313 (18%)

Query: 115 MQITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
           + +  G  HT+  S S   V+S G    G LGHG  ++   +   I       + Q++  
Sbjct: 69  ISVICGADHTIAYSESHTDVYSWGWGDFGRLGHG-NSSDLFTPQPIRQLHGLKIKQIACG 127

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           ++H   V   GQV + G N +   G   T   +  P+ ++A +GVP K V AG   T  +
Sbjct: 128 DSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFQGVPIKMVAAGAEHTAAV 186

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G ++  G   +G LG GD  DR  P+ ++ L     +V +A G  + ++V+ +G +Y
Sbjct: 187 TEDGELYGWGWGRYGNLGLGDRKDRLVPEKVS-LPHGEKMVMVACGWRHTISVSSSGGLY 245

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY------ 346
           ++G      LGHG+  D L P  ++    +G  + ++S G  H +A+ S G +Y      
Sbjct: 246 TYGWSKYGQLGHGDYADHLIPHQLEAL--QGSFISQISGGWRHTMAVTSDGKLYGWGWNK 303

Query: 347 ----------------------------------------------TWGKGYCGALGHGD 360
                                                         +WG+G  G LG+G+
Sbjct: 304 FGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGE 363

Query: 361 EIDKTLPEPLSSL 373
             D+ +P  + +L
Sbjct: 364 CTDRNVPVIIKAL 376



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 6/209 (2%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  ++  G    G LG G    + V   +++ P    +V V+    H
Sbjct: 176 VAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVP-EKVSLPHGEKMVMVACGWRH 234

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  SG ++T G +     GH D    +  P  +EAL+G    Q++ G   T  +T  
Sbjct: 235 TISVSSSGGLYTYGWSKYGQLGHGDYADHLI-PHQLEALQGSFISQISGGWRHTMAVTSD 293

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  G N  GQ+G GD +DR +P  +  PLE+   V+ I+ G  + LAVT    V+S+
Sbjct: 294 GKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQ--KVILISCGWRHTLAVTERQNVFSW 351

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           G G+N  LG+GE  D   P  I+     G
Sbjct: 352 GRGTNGQLGNGECTDRNVPVIIKALSVDG 380



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 11/165 (6%)

Query: 115 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  HT+ +S+S  +++ G S  G LGHG      +   ++     + + Q+S   
Sbjct: 226 VMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPH-QLEALQGSFISQISGGW 284

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VTAGLNFT 229
            H   V   G+++  G N     G  D    + R   V+    +P +Q    ++ G   T
Sbjct: 285 RHTMAVTSDGKLYGWGWNKFGQVGVGDN---VDRSSPVQVK--LPLEQKVILISCGWRHT 339

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
             +T R +V + G  T+GQLG+G+  DR  P  I  L   GS  Q
Sbjct: 340 LAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKALSVDGSCGQ 384


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 165/328 (50%), Gaps = 15/328 (4%)

Query: 132 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           ++  GS++ G LG G  E  Q  +     F  A++V QV+  ENH   + +SG+VF+CG+
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N     GH+       +P  VE L      +++ G N T      G +   GS++HGQLG
Sbjct: 61  NDLDQLGHKKQRT---KPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLG 117

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD- 309
              T  +P PK I  L     +VQI+ G ++ LA+T NG +YS+G   +  LG G + + 
Sbjct: 118 FNGT-TQPLPKIIKSLATF-HIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEY 175

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
           E QP  I++    GI +  ++ G  H  AL  SG +Y WGK   G LG  DE +K  P  
Sbjct: 176 EKQPTLIKSLL--GIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQ 233

Query: 370 LSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
           L +L+S  +    C      F+  D G V+  G   +G LG    G +   + PR +  L
Sbjct: 234 LKTLRSIRVKYIACGEDFSAFLSAD-GGVFTCGAGMYGQLG---HGSTSNEILPRKIMEL 289

Query: 429 RAHHVSQISTGLYHTV-VVTDRGRLFGF 455
               V+Q+S G  HT+ +V  RGR++ F
Sbjct: 290 MGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 145/293 (49%), Gaps = 11/293 (3%)

Query: 111 AGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           A N  Q+T G  HT++++ S  VFSCG++    LGH  + T+      ++F     + ++
Sbjct: 33  ASNVSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRTKPEKVEGLDF---YRITKI 89

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           S   NH     + GQ+F  G +S    G   T +P+  P+++++L      Q++ G N +
Sbjct: 90  SCGGNHTLAFNEWGQLFGWGSDSHGQLGFNGTTQPL--PKIIKSLATFHIVQISCGKNHS 147

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
             LT  G +++ G N  GQLG G   +    P  I  L  +  +  IA G ++  A++ +
Sbjct: 148 LALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGI-PIAFIACGSNHSFALSKS 206

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G +Y +G  +   LG  ++ ++L P  ++T R   I V  ++ G++    L + G V+T 
Sbjct: 207 GAIYGWGKNTYGQLGLNDEENKLHPTQLKTLR--SIRVKYIACGEDFSAFLSADGGVFTC 264

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGF 400
           G G  G LGHG   ++ LP  +  L      QV   KR T  LV + G VY F
Sbjct: 265 GAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 14/244 (5%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV----GSVVQIAAGPSYMLAVTGNGVVYS 293
           ++  GS  HG+LG G        +  AP+E       +V Q+  G ++ + +T +G V+S
Sbjct: 1   MYCWGSTVHGELGLGGI---EHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFS 57

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            G+     LGH +Q  + +      F R    + ++S G  H +A +  G ++ WG    
Sbjct: 58  CGNNDLDQLGHKKQRTKPEKVEGLDFYR----ITKISCGGNHTLAFNEWGQLFGWGSDSH 113

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG  +   + LP+ + SL +   VQ+   K  +  L + G +Y +G    G LG   R
Sbjct: 114 GQLGF-NGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMR 172

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
              +K  +P ++ SL    ++ I+ G  H+  ++  G ++G+G N   QLG +     L 
Sbjct: 173 SEYEK--QPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH 230

Query: 474 PTEI 477
           PT++
Sbjct: 231 PTQL 234


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 168/349 (48%), Gaps = 11/349 (3%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +VF+ G    G LG G +T+     T ++      V Q++    H   +   G+VFT G 
Sbjct: 1   AVFTWGRGEDGQLGLG-DTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
                 GH D N   + PR+ ++L G    QVT G   T  +T  G ++T G   +G+LG
Sbjct: 60  GDDGRLGHGD-NGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 251 HGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QH 308
           HGD     TPK +  L  VG+ V QIA G  +   VT +G +Y++G   N   GHGE + 
Sbjct: 119 HGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG 176

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
            +  PR +++   K   V ++SA   H   +  +G ++TWG+G  G LGH  E +   P 
Sbjct: 177 HQYLPRLLESMAAK--RVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPT 234

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            +  +      QV      T V+ + G +Y FG    G LG  DR      + P  +++L
Sbjct: 235 IVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDR---VNKMTPTFVEAL 291

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               VSQI+ G  H+V +T +G ++ +G+ +  +LGH   R    P  +
Sbjct: 292 DGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAV 340



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 152/302 (50%), Gaps = 14/302 (4%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           VFT G       G  DT+     P  V+AL+GV  +Q+  G   T  LT  G V T G  
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQD-EPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRG 60

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
             G+LGHGD   +  P+    L   G +V Q+  G  +  AVTGNG +Y++G G    LG
Sbjct: 61  DDGRLGHGDNGWKYVPRMTQSL--AGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 304 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EI 362
           HG++     P+ ++     G  V +++ G  H   + +SG +YTWG    G  GHG+ E 
Sbjct: 119 HGDEAGHATPKRVEAL--VGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG 176

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR- 421
            + LP  L S+ +    Q+ A    T ++ D G ++ +G   FG LG     +S++    
Sbjct: 177 HQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGH----MSERNCHS 232

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           P I+D +      Q+S G +HT VV++ GRL+ FG  E  QLGH+     + PT  F++ 
Sbjct: 233 PTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPT--FVEA 290

Query: 482 ME 483
           ++
Sbjct: 291 LD 292



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 142/290 (48%), Gaps = 16/290 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCG 141
           L   +  WK V R  QS+  +  IV       +Q+T G YHT  ++ N  +++ G  + G
Sbjct: 65  LGHGDNGWKYVPRMTQSL--AGQIV-------LQVTCGSYHTAAVTGNGDLYTWGGGMYG 115

Query: 142 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 201
            LGHG E        R+     A V Q++    H A V  SG ++T GD  +   GH +T
Sbjct: 116 KLGHGDEAGHATP-KRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGET 174

Query: 202 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
               + PRL+E++      Q++A    T  +T  G + T G    G+LGH    +  +P 
Sbjct: 175 EGHQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPT 234

Query: 262 SIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  +  VG    Q++ G  +   V+ +G +Y+FG G +  LGH ++ +++ P  ++   
Sbjct: 235 IVDYM--VGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEAL- 291

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
             G+ V +++ G  H VAL   G VYTWG G  G LGHG+     +P+ +
Sbjct: 292 -DGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAV 340


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 210
           C+    + F     V  +S    HA  V + G+V++ G+ S    GH  D + P  +P+L
Sbjct: 299 CLLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP--QPKL 356

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 267
           VEAL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 357 VEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLE 416

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 417 GI-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 473

Query: 328 RVSAGDEHVVALD------------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  ++SL  
Sbjct: 474 RAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVE 533

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  L  +G VY  G   +G LG P    +D ++  R+   L  + V +
Sbjct: 534 PNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQ---ADGMVPARVEGKLHKNFVEE 590

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 591 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 620



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 131/274 (47%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG E +  +   R+N P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMP-KRLNGPLEGIHVSSISCG 426

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEP-NFCQVACGHC 544

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 545 FTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 636



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 115/244 (47%), Gaps = 31/244 (12%)

Query: 252 GDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G  +D   PK   PLE  G   V  I+ G  +   VT  G VYS+G  S   LGHG   D
Sbjct: 294 GAKMDCLLPK---PLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD 350

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 367
             QP+ ++      I +V  + G+ H  A+  SG +YTWG G    G LGHG+E+   +P
Sbjct: 351 VPQPKLVEALAHMNIELV--ACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMP 408

Query: 368 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
           +    PL  +  H++   C     T V+   G ++ FG   FG LG  DR     +  PR
Sbjct: 409 KRLNGPLEGI--HVSSISCG-PWHTAVVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPR 462

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 471
            ++SL+     + + G++HT  V +             G++F +GD ++ +LGH      
Sbjct: 463 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTR 522

Query: 472 LEPT 475
           L PT
Sbjct: 523 LVPT 526



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 423 ISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 480

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D +  +  P  V +L      QV
Sbjct: 481 HTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVASLVEPNFCQV 539

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G  FT  LT  GHV+T GS+ +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQA-DGMVPARVEGKLHKNFVEEISCGAYHV 598

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 599 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSV 643



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 8/183 (4%)

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
           S F    G + D L P+ ++   R  + V  +S G  H   +   G VY+WG+   G LG
Sbjct: 287 SRFGNSSGAKMDCLLPKPLEFAGR--LDVQNISCGGRHATLVTKQGEVYSWGEESGGRLG 344

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRG 414
           HG + D   P+ + +L +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  
Sbjct: 345 HGVDCDVPQPKLVEAL-AHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNE- 402

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           VS  + + R+   L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P
Sbjct: 403 VSHWMPK-RLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVP 461

Query: 475 TEI 477
            E+
Sbjct: 462 REV 464



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 23/200 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE   GN          T   S+  +F+ G    G LGHG + T+
Sbjct: 471 RTVRAACGVWHTAAVVEVMVGNS--------STSNCSSGKIFTWGDGDKGRLGHGDKDTR 522

Query: 152 CV-----SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 206
            V     S    NF       QV+        +  SG V+T G +     G+   +  + 
Sbjct: 523 LVPTCVASLVEPNF------CQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMV- 575

Query: 207 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P  VE  L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  
Sbjct: 576 -PARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEA 634

Query: 266 LEEVGSVVQIAAGPSYMLAV 285
           L++   V  +  G ++  A+
Sbjct: 635 LKD-KQVRSVVCGINFTAAI 653



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 3/127 (2%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N  Q+  G   T+ ++ S  V++ GSS+ G LG+ P+    V            V ++S 
Sbjct: 535 NFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEISC 593

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNSPTLVEALKDKQVRSVVCGINFTAA 652

Query: 232 LTIRGHV 238
           + I   V
Sbjct: 653 ICIHKWV 659


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 177/354 (50%), Gaps = 15/354 (4%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQ 184
           L+    +F  G++  G LG G    + +    +++F  A+ + Q++  EN+   +   G+
Sbjct: 27  LLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGK 86

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +++CG+N     GH    +   R +L+  L     K+V  G   T  +   G + + GSN
Sbjct: 87  IYSCGNNDYGQLGHERGRK---RLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSN 143

Query: 245 THGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
           + GQLG +       +P+ +  L     +VQ+A G  + LA+T NG +YS+GS S   LG
Sbjct: 144 SEGQLGLNSKNFMECSPRMVKTLG-TSIIVQVACGMKHALALTNNGELYSWGSNSEGQLG 202

Query: 304 HG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
            G +   E++P+ I T    G+ +  ++ G  H +A+  SG ++ WGK   G LG  D  
Sbjct: 203 LGVDIRSEVKPKLINTL--AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQ 260

Query: 363 DKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
           ++ LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G ++  + 
Sbjct: 261 NRNLPHQLQTLRNAKICYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNNNEIL 316

Query: 422 PRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           PR +  L    V+QIS G  HT+ +V  +GR++ +G     QLG+++ R    P
Sbjct: 317 PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTP 370



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 140/305 (45%), Gaps = 13/305 (4%)

Query: 110 SAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHV 166
            A    QI  G  +T++I+ +  ++SCG++  G LGH  G +  Q +         A   
Sbjct: 64  KASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHERGRKRLQLILGL-----DAFVF 118

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            +V+    H   V + GQ+F+ G NS    G    N     PR+V+ L      QV  G+
Sbjct: 119 KKVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGM 178

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
                LT  G +++ GSN+ GQLG G D      PK I  L  V  +  IA G  + +A+
Sbjct: 179 KHALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGV-PIAFIACGGYHSIAI 237

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           + +G ++ +G  +   LG  +  +   P  +QT R   I     + G+E  V L   G V
Sbjct: 238 SKSGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKI--CYAACGEEFSVFLTVDGGV 295

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMG 404
           +T G G  G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G  G
Sbjct: 296 FTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGG 355

Query: 405 FGSLG 409
            G LG
Sbjct: 356 AGQLG 360



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 7/256 (2%)

Query: 116 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G YHT+ ++    +FS GS+  G LG   +     S   +     + +VQV+    
Sbjct: 120 KVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMK 179

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           HA  +  +G++++ G NS    G     R   +P+L+  L GVP   +  G   +  ++ 
Sbjct: 180 HALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISK 239

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G +   G NT GQLG  DT +R  P  +  L     +   A G  + + +T +G V++ 
Sbjct: 240 SGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRN-AKICYAACGEEFSVFLTVDGGVFTC 298

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 353
           G+G    LGHG  ++E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  
Sbjct: 299 GAGMYGQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA 356

Query: 354 GALGHGDEIDKTLPEP 369
           G LG+     +++P P
Sbjct: 357 GQLGNNS--TRSIPTP 370



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 72/166 (43%), Gaps = 5/166 (3%)

Query: 101 EHSSDIVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI 158
           E    ++ T AG  +  I  G YH++ IS S ++F  G +  G LG      + +   ++
Sbjct: 210 EVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPH-QL 268

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
                A +   +  E  + F+   G VFTCG       GH   N  I  PR V  L G  
Sbjct: 269 QTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL-PRQVMELMGST 327

Query: 219 CKQVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
             Q++ G   T   +  +G V+  G    GQLG+  T   PTP+ +
Sbjct: 328 VTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVV 373


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 175/354 (49%), Gaps = 15/354 (4%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQ 184
           L+    +F  G++  G LG G    + +     ++F  A+ + Q++  EN+   +   G+
Sbjct: 43  LLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGK 102

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +++CG+N     GH    +   R +L+  L     K+   G   T  +   G + + GSN
Sbjct: 103 IYSCGNNDYGQLGHEQGRK---RLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSN 159

Query: 245 THGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
           + GQLG +       +P+ +  L     +VQIA G  + LA+T NG +YS+GS S   LG
Sbjct: 160 SEGQLGLNSKNFMECSPRMVKTLG-TSIIVQIACGMKHALALTNNGELYSWGSNSEGQLG 218

Query: 304 HG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
            G +   E++P+ I T    G+ +  ++ G  H +A+  SG ++ WGK   G LG  D  
Sbjct: 219 LGVDIRCEMKPKLINTL--AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQ 276

Query: 363 DKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
           ++ LP  L +L+ + +    C  +   F+ VD G V+  G   +G LG    G ++  + 
Sbjct: 277 NRNLPYQLQTLRNAKVCYAACGEEFSVFLTVD-GGVFTCGAGMYGQLG---HGSNNNEIL 332

Query: 422 PRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           PR +  L    V+QIS G  HT+ +V  +GR++ +G     QLG+++ R    P
Sbjct: 333 PRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTP 386



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 139/306 (45%), Gaps = 15/306 (4%)

Query: 110 SAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGH--GPETTQCV-SFTRINFPSAAH 165
            A    QI  G  +T++I+ +  ++SCG++  G LGH  G +  Q +       F  AA 
Sbjct: 80  KASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQGRKRLQLILGLDAFVFKKAA- 138

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
                    H   V + GQ+F+ G NS    G    N     PR+V+ L      Q+  G
Sbjct: 139 -----CGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACG 193

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           +     LT  G +++ GSN+ GQLG G D      PK I  L  V  +  IA G  + +A
Sbjct: 194 MKHALALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGV-PIAFIACGGYHSIA 252

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           ++ +G ++ +G  +   LG  +  +   P  +QT R     V   + G+E  V L   G 
Sbjct: 253 ISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNA--KVCYAACGEEFSVFLTVDGG 310

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWM 403
           V+T G G  G LGHG   ++ LP  +  L      Q+   KR T  LV + G VY +G  
Sbjct: 311 VFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLG 370

Query: 404 GFGSLG 409
           G G LG
Sbjct: 371 GAGQLG 376



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%), Gaps = 5/251 (1%)

Query: 120 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           G YHT+ ++    +FS GS+  G LG   +     S   +     + +VQ++    HA  
Sbjct: 140 GAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALA 199

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           +  +G++++ G NS    G     R   +P+L+  L GVP   +  G   +  ++  G +
Sbjct: 200 LTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAI 259

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
              G NT GQLG  DT +R  P  +  L     V   A G  + + +T +G V++ G+G 
Sbjct: 260 FGWGKNTFGQLGLNDTQNRNLPYQLQTLRN-AKVCYAACGEEFSVFLTVDGGVFTCGAGM 318

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 357
              LGHG  ++E+ PR  Q     G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 319 YGQLGHGSNNNEILPR--QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLG 376

Query: 358 HGDEIDKTLPE 368
           +      T P+
Sbjct: 377 NNSTRSTTTPQ 387



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 72/166 (43%), Gaps = 5/166 (3%)

Query: 101 EHSSDIVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI 158
           E    ++ T AG  +  I  G YH++ IS S ++F  G +  G LG      + + + ++
Sbjct: 226 EMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPY-QL 284

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
                A V   +  E  + F+   G VFTCG       GH   N  I  PR V  L G  
Sbjct: 285 QTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEIL-PRQVMELMGST 343

Query: 219 CKQVTAGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
             Q++ G   T   +  +G V+  G    GQLG+  T    TP+ +
Sbjct: 344 VTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTPQVV 389


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 8/326 (2%)

Query: 131 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           +++  GS++ G LG G  E  Q ++   +++  AA+V Q +   +H   + + G+++TCG
Sbjct: 2   ALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
           +N     GH   N P  RP+ + AL+     QV+ GL+ +  LT  G + + GSN  GQL
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121

Query: 250 GHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
           GH  D +  P P+ I  +    +VVQI+ G S+ LA+T +G ++++G+     LG G   
Sbjct: 122 GHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTG 180

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
            ++ P A       GI +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P 
Sbjct: 181 KKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPT 239

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            L +L+S     +      +  L   G V+  G   FG LG    G     + PR++  L
Sbjct: 240 QLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLG---HGTHGNEILPRMVFEL 296

Query: 429 RAHHVSQISTGLYHTVV-VTDRGRLF 453
               ++QI+ G  HT+  V  RG+++
Sbjct: 297 MGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 139/281 (49%), Gaps = 17/281 (6%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKS 262
           +  PR ++  +    +Q   G + T  LT  G ++TCG+N HGQLGH DT + P   P+ 
Sbjct: 24  VMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGH-DTNNLPNKRPQF 82

Query: 263 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRR 321
           I+ LE    V Q++ G S+ LA+T  G ++S+GS +   LGH  +      PR I++   
Sbjct: 83  ISALENY-IVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIAT 141

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--- 378
           K   VV++S G  H +AL +SG ++ WG    G LG G    K    P ++L   LA   
Sbjct: 142 KT--VVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKV---PTATLVKSLAGIP 196

Query: 379 -VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 437
              +      +F +  +G+++G+G   FG LG  D    D    P  L +LR+  V  IS
Sbjct: 197 IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---DSRCYPTQLKTLRSLGVRYIS 253

Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            G   +V +T  G +F  G     QLGH T    + P  +F
Sbjct: 254 CGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVF 294



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 109 TSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-- 165
           + A N  Q   G  HTLL++ +  +++CG++  G LGH    T  +   R  F SA    
Sbjct: 33  SQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHD---TNNLPNKRPQFISALENY 89

Query: 166 -VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            V QVS   +H+  +   GQ+F+ G N++   GH         PR+++++      Q++ 
Sbjct: 90  IVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISC 149

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYML 283
           G +    LT  G +   G+N +GQLG G T  + PT   +  L  +  +  IA G ++  
Sbjct: 150 GHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGI-PIAFIACGGNHSF 208

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           AV+ +G ++ +G  +   LG  +      P  ++T R  G+    +S GD+  V L   G
Sbjct: 209 AVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRY--ISCGDDFSVFLTQEG 266

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVY 398
            V+T G G  G LGHG   ++ LP  +  L      Q+ C RK     +   G VY
Sbjct: 267 GVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 238 VHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           ++  GS  HG+LG G   +    TP+ +    +  +V Q A G S+ L +T +G +Y+ G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREM-DWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 296 SGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           +  +  LGH   +    +P+ I     +   V +VS G  H +AL + G +++WG    G
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISAL--ENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 355 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LGH  D +    P  + S+ +   VQ+         L ++G ++ +G   +G LG    
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G   KV    ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L     
Sbjct: 180 G--KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCY 237

Query: 474 PTEI 477
           PT++
Sbjct: 238 PTQL 241



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 8/195 (4%)

Query: 291 VYSFGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           +Y +GS  +  LG G  E+   + PR +     +  +V + + G  H + L   G +YT 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMD--WSQAANVQQAACGGSHTLLLTKDGKLYTC 60

Query: 349 GKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G LGH  + +    P+ +S+L++++  QV      +  L + G ++ +G    G 
Sbjct: 61  GNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQ 120

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG     VS     PR++ S+    V QIS G  H + +T+ G LF +G NE  QLG  T
Sbjct: 121 LGHDLDMVSYPA--PRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGT 178

Query: 468 LRGCLEPTEIFIQEM 482
             G   PT   ++ +
Sbjct: 179 -TGKKVPTATLVKSL 192


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 145/284 (51%), Gaps = 9/284 (3%)

Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
           +V++ G       GH D  +   +PRLV A  G   +QV+ G   T  L   G V T G 
Sbjct: 7   EVYSWGQGVLGQLGHGD-EKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGR 65

Query: 244 NTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
              GQLG G   T +  TP  ++ L+    V Q+A G  +  A+  NG +Y++GSG    
Sbjct: 66  GNFGQLGQGASVTANVSTPALVSALQGK-HVKQVACGWHHTCALIDNGQLYTWGSGEYGR 124

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGHG++  +  P+ +++ + K   V  V+AG  H   +   G + TWG GY G LGHGDE
Sbjct: 125 LGHGDEVRQASPKLVESLQGK--EVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDE 182

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
            D+  P+ +  ++  +A +V      T +L  +  V+ +G   FG LG  D    +K   
Sbjct: 183 TDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDE---EKHAE 239

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           P ++ +L+   V  ISTG +H+  +T  G L+ +G  ++ QLGH
Sbjct: 240 PIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGH 283



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 6/271 (2%)

Query: 113 NQMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVS 170
           N  Q++ G  HT +L+ N  VF+ G    G LG G   T  VS    ++     HV QV+
Sbjct: 40  NVRQVSCGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVA 99

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
              +H   ++ +GQ++T G       GH D  R    P+LVE+L+G     V AG   + 
Sbjct: 100 CGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQA-SPKLVESLQGKEVTFVAAGGFHSS 158

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            +   G++ T G    GQLGHGD  DR TPK +  +++     ++A G  + L +T +  
Sbjct: 159 VIIEGGNLLTWGGGYFGQLGHGDETDRKTPKMVKGVQQC-IAHEVACGTHHTLMLTQSQE 217

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+++GSG    LG G++    +P  I     +G+ V+ +S G  H  AL S G +YTWG 
Sbjct: 218 VWTWGSGEFGKLGIGDEEKHAEPIMITAL--QGVGVIHISTGGFHSAALTSEGVLYTWGG 275

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           G  G LGHGDE  + +P  +  +   +++ V
Sbjct: 276 GDKGQLGHGDENSQNIPVVVEVISCDMSILV 306



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 15/290 (5%)

Query: 130 SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           S V+S G  + G LGHG E TQ      V+F   N      V QVS    H A ++++G+
Sbjct: 6   SEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFN------VRQVSCGNQHTAILMENGE 59

Query: 185 VFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
           VFT G  +    G        +  P LV AL+G   KQV  G + T  L   G ++T GS
Sbjct: 60  VFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGS 119

Query: 244 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
             +G+LGHGD + + +PK +  L+    V  +AAG  +   +   G + ++G G    LG
Sbjct: 120 GEYGRLGHGDEVRQASPKLVESLQGK-EVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178

Query: 304 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
           HG++ D   P+ ++  ++   H   V+ G  H + L  S  V+TWG G  G LG GDE  
Sbjct: 179 HGDETDRKTPKMVKGVQQCIAH--EVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEK 236

Query: 364 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
              P  +++L+    + +      +  L   G +Y +G    G LG  D 
Sbjct: 237 HAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDE 286


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 156/315 (49%), Gaps = 22/315 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G++FT G+ S    GH   +  + +P+LV+AL     + V+ G
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGH-GVDSDVLQPKLVDALGNTNIELVSCG 368

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G  T+  G LGHG+ +    PK I  PLE +  V  IA GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGI-HVSSIACGPWHT 427

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 AVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G  G LGHGD+  K +P  +++L      +V      T  
Sbjct: 486 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVA 545

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  +G VY  G   +G LG P    +D  +  R+   L    V +I+ G YH  V+T R 
Sbjct: 546 LTTSGHVYTMGSPVYGQLGNPH---ADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRT 602

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G     +LGH
Sbjct: 603 EVYTWGKGANGRLGH 617



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           ++ G YHT  ++ S     +  G+   G+LGHG E +  +   +IN P    HV  ++  
Sbjct: 365 VSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIP-KKINGPLEGIHVSSIACG 423

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD +    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRGS-VTMPREVESLKGLRTVRAACGVWHTAAV 482

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   +  P  +A L +  +  +++ G S
Sbjct: 483 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP-NFCRVSCGHS 541

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+     ++  R      +    V  ++ G  HV  L 
Sbjct: 542 MTVALTTSGHVYTMGSPVYGQLGNPHADGKVPVRVEGKLSKS--FVEEIACGAYHVAVLT 599

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 633



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 107/222 (48%), Gaps = 26/222 (11%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  IA G  +   VT  G ++++G  S   LGHG   D LQP+ +       I +  VS 
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIEL--VSC 367

Query: 332 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 385
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 368 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGI--HVSSIACG-P 424

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T V+   G ++ FG   FG LG  DRG    V  PR ++SL+     + + G++HT  
Sbjct: 425 WHTAVVTSAGQLFTFGDGTFGVLGHGDRG---SVTMPREVESLKGLRTVRAACGVWHTAA 481

Query: 446 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           V +             G+LF +GD ++ +LGH      L PT
Sbjct: 482 VVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPT 523



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 19/272 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G + T G  + G+LGHG   D   PK +  L 
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALG 358

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
              ++  ++ G  +  AVT +G +Y++G G+ NF  LGHG +     P+ I     +GIH
Sbjct: 359 NT-NIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKING-PLEGIH 416

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  ++ G  H   + S+G ++T+G G  G LGHGD    T+P  + SLK    V+     
Sbjct: 417 VSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGV 476

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 477 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDK---ETKLVPTCVAALVDPNF 533

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            ++S G   TV +T  G ++  G     QLG+
Sbjct: 534 CRVSCGHSMTVALTTSGHVYTMGSPVYGQLGN 565



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 144/350 (41%), Gaps = 21/350 (6%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+  L+     +F+ G    G LGHG ++   +    ++     ++  VS  E H   V
Sbjct: 317 GRHAALVTKQGEIFTWGEESGGRLGHGVDS-DVLQPKLVDALGNTNIELVSCGEYHTCAV 375

Query: 180 LQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             SG ++T GD + +F   GH +        ++   L+G+    +  G   T  +T  G 
Sbjct: 376 TLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWHTAVVTSAGQ 435

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----------- 286
           + T G  T G LGHGD      P+ +  L+ +   V+ A G  +  AV            
Sbjct: 436 LFTFGDGTFGVLGHGDRGSVTMPREVESLKGL-RTVRAACGVWHTAAVVEVMVGSSSSSN 494

Query: 287 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             +G ++++G G    LGHG++  +L P  +        +  RVS G    VAL +SG+V
Sbjct: 495 CSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP--NFCRVSCGHSMTVALTTSGHV 552

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           YT G    G LG+     K        L      ++        VL     VY +G    
Sbjct: 553 YTMGSPVYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGAN 612

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           G LG  D   +D    P ++++L+   V  I+ G   T  +     + GF
Sbjct: 613 GRLGHGD---TDDRNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGF 659



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I  G +HT +++++  +F+ G    GVLGHG   +  V+  R +        V+ +    
Sbjct: 420 IACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGS--VTMPREVESLKGLRTVRAACGVW 477

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D    +  P  V AL      +V
Sbjct: 478 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLV-PTCVAALVDPNFCRV 536

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
           + G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 537 SCGHSMTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPVRVEGKLSKSFVEEIACGAYHV 595

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSI 640



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 10/183 (5%)

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           GS F L    + D L P+A+++     + V  ++ G  H   +   G ++TWG+   G L
Sbjct: 287 GSCFSL----KMDSLLPKALESAVV--LDVQNIACGGRHAALVTKQGEIFTWGEESGGRL 340

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRG 414
           GHG + D   P+ + +L +     V   +  T  +  +G +Y  G G   FG LG  +  
Sbjct: 341 GHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE- 399

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           VS  + + +I   L   HVS I+ G +HT VVT  G+LF FGD     LGH        P
Sbjct: 400 VSHWIPK-KINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMP 458

Query: 475 TEI 477
            E+
Sbjct: 459 REV 461



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 15/196 (7%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGHG + T+
Sbjct: 468 RTVRAACGVWHTAAVVE--------VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETK 519

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPR 209
            V  T +      +  +VS   +    +  SG V+T G       G  H D   P+   R
Sbjct: 520 LVP-TCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKVPV---R 575

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           +   L     +++  G      LT R  V+T G   +G+LGHGDT DR +P  +  L++ 
Sbjct: 576 VEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKD- 634

Query: 270 GSVVQIAAGPSYMLAV 285
             V  IA G ++  A+
Sbjct: 635 KQVKSIACGTNFTAAI 650


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 8/326 (2%)

Query: 131 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           +++  GS++ G LG G  E  Q ++   +++  AA+V Q +   +H   + + G+++TCG
Sbjct: 2   ALYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
           +N     GH   N P  RP+ + AL+     QV+ GL+ +  LT  G + + GSN  GQL
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQL 121

Query: 250 GHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
           GH  D +  P P+ I  +    +VVQI+ G S+ LA+T +G ++++G+     LG G   
Sbjct: 122 GHDLDMVSYPAPRMIKSI-ATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTG 180

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
            ++ P A       GI +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P 
Sbjct: 181 KKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPT 239

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            L +L+S     +      +  L   G V+  G   FG LG    G     + PR++  L
Sbjct: 240 QLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLG---HGTHGNEILPRMVFEL 296

Query: 429 RAHHVSQISTGLYHTVV-VTDRGRLF 453
               ++QI+ G  HT+  V  RG+++
Sbjct: 297 MGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 139/281 (49%), Gaps = 17/281 (6%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKS 262
           +  PR ++  +    +Q   G + T  LT  G ++TCG+N HGQLGH DT + P   P+ 
Sbjct: 24  VMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGH-DTNNLPNKRPQF 82

Query: 263 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRR 321
           I+ LE    V Q++ G S+ LA+T  G ++S+GS +   LGH  +      PR I++   
Sbjct: 83  ISALENY-IVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIAT 141

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--- 378
           K   VV++S G  H +AL +SG ++ WG    G LG G    K    P ++L   LA   
Sbjct: 142 KT--VVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKV---PTATLVKSLAGIP 196

Query: 379 -VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 437
              +      +F +  +G+++G+G   FG LG  D    D    P  L +LR+  V  IS
Sbjct: 197 IAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---DSRCYPTQLKTLRSLGVRYIS 253

Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            G   +V +T  G +F  G     QLGH T    + P  +F
Sbjct: 254 CGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGNEILPRMVF 294



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 109 TSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-- 165
           + A N  Q   G  HTLL++ +  +++CG++  G LGH    T  +   R  F SA    
Sbjct: 33  SQAANVQQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHD---TNNLPNKRPQFISALENY 89

Query: 166 -VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            V QVS   +H+  +   GQ+F+ G N++   GH         PR+++++      Q++ 
Sbjct: 90  IVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISC 149

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYML 283
           G +    LT  G +   G+N +GQLG G T  + PT   +  L  +  +  IA G ++  
Sbjct: 150 GHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGI-PIAFIACGGNHSF 208

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           AV+ +G ++ +G  +   LG  +      P  ++T R  G+    +S GD+  V L   G
Sbjct: 209 AVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRY--ISCGDDFSVFLTQEG 266

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVY 398
            V+T G G  G LGHG   ++ LP  +  L      Q+ C RK     +   G VY
Sbjct: 267 GVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 238 VHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           ++  GS  HG+LG G   +    TP+ +    +  +V Q A G S+ L +T +G +Y+ G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREM-DWSQAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 296 SGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           +  +  LGH   +    +P+ I     +   V +VS G  H +AL + G +++WG    G
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISAL--ENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 355 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LGH  D +    P  + S+ +   VQ+         L ++G ++ +G   +G LG    
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G   KV    ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L     
Sbjct: 180 G--KKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCY 237

Query: 474 PTEI 477
           PT++
Sbjct: 238 PTQL 241



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 8/195 (4%)

Query: 291 VYSFGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           +Y +GS  +  LG G  E+   + PR +     +  +V + + G  H + L   G +YT 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMD--WSQAANVQQAACGGSHTLLLTKDGKLYTC 60

Query: 349 GKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G LGH  + +    P+ +S+L++++  QV      +  L + G ++ +G    G 
Sbjct: 61  GNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQ 120

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG     VS     PR++ S+    V QIS G  H + +T+ G LF +G NE  QLG  T
Sbjct: 121 LGHDLDMVSYPA--PRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGT 178

Query: 468 LRGCLEPTEIFIQEM 482
             G   PT   ++ +
Sbjct: 179 -TGKKVPTATLVKSL 192


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 162/331 (48%), Gaps = 24/331 (7%)

Query: 151 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPR 209
            C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+
Sbjct: 297 DCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPK 354

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APL 266
           L++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PL
Sbjct: 355 LIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 414

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
           E +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  
Sbjct: 415 EGI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRT 471

Query: 327 VRVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           VR + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L 
Sbjct: 472 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALV 531

Query: 375 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
                Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V 
Sbjct: 532 EPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVE 588

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           +IS G YH  V+T R  ++ +G     +LGH
Sbjct: 589 EISCGAYHVAVLTSRTEVYTWGKGANGRLGH 619



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHVSAISCG 425

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 484

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  QIA G  
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHC 543

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 544 MTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 601

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 602 SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALK 635



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 369

Query: 332 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 385
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 426

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 427 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 483

Query: 446 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 484 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 525



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 422 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDR--QSLSVPREVESLKGLRTVRAACGVW 479

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 538

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 277
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 539 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 642



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 6/175 (3%)

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 293 GVNMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 350

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG--VSDKVLRP 422
             P+ + +L +     V   +  T  +  +G +Y +G  G  + G    G  VS  V + 
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWG-NGTSNSGLLGHGNEVSHWVPK- 408

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 409 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 463



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 11/194 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGHG + T+
Sbjct: 470 RTVRAACGVWHTAAVVE--------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTR 521

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T +      +  Q++        +  SG V+T G       G+   +  +   R+ 
Sbjct: 522 LVP-TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVE 579

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
             L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L++   
Sbjct: 580 GKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD-KQ 638

Query: 272 VVQIAAGPSYMLAV 285
           V  +  G ++  A+
Sbjct: 639 VRTVVCGINFTAAI 652



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 3/127 (2%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N  QI  G   T+ ++ S  V++ GS + G LG+ P+    +            V ++S 
Sbjct: 534 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINFTAA 651

Query: 232 LTIRGHV 238
           + I   V
Sbjct: 652 ICIHKWV 658


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 210
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 344 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 401

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 267
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 402 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 461

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 462 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 518

Query: 328 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L  
Sbjct: 519 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 578

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +
Sbjct: 579 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVEE 635

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 636 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 665



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 413 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHVSAISCG 471

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 472 PWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 530

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  QIA G  
Sbjct: 531 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHC 589

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 590 MTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 647

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 648 SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALK 681



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 358 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 415

Query: 332 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 385
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 416 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 472

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 473 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 529

Query: 446 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 530 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 571



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 468 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 525

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 526 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 584

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 277
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 585 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 638

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 639 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 688



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 6/175 (3%)

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 339 GVNMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 396

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG--VSDKVLRP 422
             P+ + +L +     V   +  T  +  +G +Y +G  G  + G    G  VS  V + 
Sbjct: 397 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWG-NGTSNSGLLGHGNEVSHWVPK- 454

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 455 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 509



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 11/194 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGHG + T+
Sbjct: 516 RTVRAACGVWHTAAVVE--------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTR 567

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T +      +  Q++        +  SG V+T G       G+   +  +   R+ 
Sbjct: 568 LVP-TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVE 625

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
             L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L++   
Sbjct: 626 GKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD-KQ 684

Query: 272 VVQIAAGPSYMLAV 285
           V  +  G ++  A+
Sbjct: 685 VRTVVCGINFTAAI 698



 Score = 42.7 bits (99), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 9/130 (6%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQ 168
           N  QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V +
Sbjct: 580 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEE 635

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           +S    H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NF
Sbjct: 636 ISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINF 694

Query: 229 TGFLTIRGHV 238
           T  + I   V
Sbjct: 695 TAAICIHKWV 704


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 210
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 298 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 355

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 267
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 356 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 415

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 416 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 472

Query: 328 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L  
Sbjct: 473 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 532

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +
Sbjct: 533 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVEE 589

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 590 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 619



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHVSAISCG 425

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 484

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  QIA G  
Sbjct: 485 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHC 543

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 544 MTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 601

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 602 SRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALK 635



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 312 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 369

Query: 332 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 385
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 370 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 426

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 427 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 483

Query: 446 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 484 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 525



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 28/230 (12%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 422 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 479

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 538

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 277
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 539 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 592

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           G  ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 593 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTV 642



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 6/175 (3%)

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 293 GVNMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 350

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG--VSDKVLRP 422
             P+ + +L +     V   +  T  +  +G +Y +G  G  + G    G  VS  V + 
Sbjct: 351 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWG-NGTSNSGLLGHGNEVSHWVPK- 408

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 409 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 463



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 11/194 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGHG + T+
Sbjct: 470 RTVRAACGVWHTAAVVE--------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTR 521

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T +      +  Q++        +  SG V+T G       G+   +  +   R+ 
Sbjct: 522 LVP-TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVE 579

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
             L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L++   
Sbjct: 580 GKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD-KQ 638

Query: 272 VVQIAAGPSYMLAV 285
           V  +  G ++  A+
Sbjct: 639 VRTVVCGINFTAAI 652



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 9/130 (6%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQ 168
           N  QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V +
Sbjct: 534 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEE 589

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           +S    H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NF
Sbjct: 590 ISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVEALKDKQVRTVVCGINF 648

Query: 229 TGFLTIRGHV 238
           T  + I   V
Sbjct: 649 TAAICIHKWV 658


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 163/339 (48%), Gaps = 22/339 (6%)

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
           C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  +  P+L+
Sbjct: 301 CLVPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGH-GVDCDVAHPKLI 359

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEE 268
           +AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE 
Sbjct: 360 DALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEG 419

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
           +  V  I+ GP + + VT  G +++FG GS   LGHG++     P+ +++   KG+  VR
Sbjct: 420 I-HVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESL--KGLRTVR 476

Query: 329 VSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
            + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L   
Sbjct: 477 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEP 536

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
              QV      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +I
Sbjct: 537 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGMLPARVEGKLHKNFVEEI 593

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           S G YH  V+T R  ++ +G     +LGH        PT
Sbjct: 594 SCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPT 632



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   +++ P    HV  +S  
Sbjct: 370 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVP-KKLHGPLEGIHVSSISCG 428

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   V  +GQ+FT GD S    GH D    +  P+ VE+LKG+   +   G+  T  +
Sbjct: 429 PFHTVIVTSAGQLFTFGDGSFGVLGHGD-RESLSVPKEVESLKGLRTVRAACGVWHTAAV 487

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 488 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEP-NFCQVACGHC 546

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 547 LTVALTTSGHVYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNF-VEEISCGAYHVAVLT 604

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHG+  DK  P  + +LK
Sbjct: 605 SRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALK 638



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 16/224 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G +HT++++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 425 ISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVP-KEVESLKGLRTVRAACGVWH 483

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH D    +  P  V AL      QV 
Sbjct: 484 TAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLV-PTCVAALVEPNFCQVA 542

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++ 
Sbjct: 543 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQA-DGMLPARVEGKLHKNFVEEISCGAYHVA 601

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 602 VLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNV 645



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 89/174 (51%), Gaps = 8/174 (4%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           + D L P+ ++   R  + V  +S G +H   +   G +Y+WG+   G LGHG + D   
Sbjct: 298 KMDCLVPKPLEFAVR--LDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAH 355

Query: 367 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 423
           P+ + +L +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  +S  V + +
Sbjct: 356 PKLIDAL-THMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DISHWVPK-K 412

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   L   HVS IS G +HTV+VT  G+LF FGD     LGH        P E+
Sbjct: 413 LHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEV 466



 Score = 46.6 bits (109), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 11/194 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE  AGN              S+  +F+ G    G LGHG + ++
Sbjct: 473 RTVRAACGVWHTAAVVEVMAGNSSSSNC--------SSGKIFTWGDGDKGRLGHGDKESR 524

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T +      +  QV+        +  SG V+T G       G+   +  +   R+ 
Sbjct: 525 LVP-TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQAD-GMLPARVE 582

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
             L     ++++ G      LT R  V+T G   +G+LGHG+T D+ TP  +  L++   
Sbjct: 583 GKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKD-KQ 641

Query: 272 VVQIAAGPSYMLAV 285
           V  +  G ++  A+
Sbjct: 642 VRNVVCGTNFTAAI 655



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 3/123 (2%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N  Q+  G   T+ ++ S  V++ GS++ G LG+ P+    +            V ++S 
Sbjct: 537 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN-PQADGMLPARVEGKLHKNFVEEISC 595

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H A +    +V+T G  ++   GH +T+     P LVEALK    + V  G NFT  
Sbjct: 596 GAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDK-NTPTLVEALKDKQVRNVVCGTNFTAA 654

Query: 232 LTI 234
           + I
Sbjct: 655 ICI 657


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 170/348 (48%), Gaps = 9/348 (2%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +V++ G    G LG G  + Q      +        VQ+S    H   +   G+V+T G 
Sbjct: 2   TVYTWGRGEDGQLGLGDTSDQYHPIL-VEALQDRQTVQISCGSGHTVVLTDDGKVYTWGR 60

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
                 GH D N   F PRLVE L+    +QVT G   T  +T+ G ++T G   +G+LG
Sbjct: 61  GDDGRLGHGD-NGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-D 309
           HG+     TP  +  ++ +  V Q+A G  + + +  N  VY++G   N   GHG+    
Sbjct: 120 HGNENGHSTPSLVESIKGL-YVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSGH 178

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
           +  P  +       I++ ++SA   H  AL  +G V+T+G+G  G LGH  E ++ + + 
Sbjct: 179 QYSPYCVSELVE--INIKQISACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKC 236

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           + +L      QV      T  + ++G V+ +G    G LG  D+   ++++  R+ +SL 
Sbjct: 237 IDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDK--VNQIIPTRV-ESLI 293

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ Q++ G  HTV +TD+G +F +G+ +  +LGH+      EP  I
Sbjct: 294 DKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPKLI 341



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 170/336 (50%), Gaps = 10/336 (2%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI+ G  HT+++++   V++ G    G LGHG    + V     +      V QV+   
Sbjct: 37  VQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKK-VRQVTCGS 95

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H A V  SG+++T G       GH + N     P LVE++KG+  +QV  G   T  L 
Sbjct: 96  YHTAAVTVSGELYTWGGGMYGKLGHGNENGH-STPSLVESIKGLYVRQVACGSRHTVVLL 154

Query: 234 IRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
               V+T G   +G  GHGDT   + +P  ++ L E+ ++ QI+A   +  A++ NG V+
Sbjct: 155 ENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEI-NIKQISACGFHTAALSENGQVF 213

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +FG G    LGH  + ++   + I      G  + +V+ G  H  A+  SG+V+TWG G 
Sbjct: 214 TFGEGKFGRLGHNSERNQPVAKCIDAL--IGKRIKQVACGGFHTAAVTESGHVFTWGGGE 271

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHGD++++ +P  + SL     +Q+      T  L D G V+ +G    G LG  D
Sbjct: 272 HGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHND 331

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
              ++KV  P+++++  +  V  +++   HTV + +
Sbjct: 332 ---TNKVTEPKLIETFNSKRVISVASYNEHTVALVN 364


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 154/324 (47%), Gaps = 21/324 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+Q++    HAA V + G++FT G+ S    GH    + + +PRLVEA+       V  G
Sbjct: 281 VLQIACGVKHAALVTRQGELFTWGEESGGRLGH-GVGKNVVQPRLVEAMASTTVDFVACG 339

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 340 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVALVTCGPWHT 398

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 340
             +T  G +++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+   
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESL--SGLRTIAVACGVWHTAAIIEV 456

Query: 341 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                    SSG ++TWG G    LGHGD+  +  P  + SL      ++      T  L
Sbjct: 457 IVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIACGHSLTVGL 516

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
             +G V+  G   +G LG P    SD  L   + D      V +I+ G YH  V+T +  
Sbjct: 517 TTSGRVFTMGSTVYGQLGNPQ---SDGKLPCLVEDKFAGESVEEIACGAYHVAVLTSKNE 573

Query: 452 LFGFGDNERAQLGHDTLRGCLEPT 475
           +F +G     +LGH  +     PT
Sbjct: 574 VFTWGKGANGRLGHGDVEDRKSPT 597



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 130/294 (44%), Gaps = 22/294 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE  A   +  +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGP 382

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V  V+    H A +  +GQ+FT GD +    GH D    +  PR VE+L G+   
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDREN-VSYPREVESLSGLRTI 441

Query: 221 QVTAGLNFTGFL-----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V  G+  T  +              G + T G     +LGHGD   R  P  +  L E 
Sbjct: 442 AVACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIE- 500

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
            +  +IA G S  + +T +G V++ GS     LG+ +   +L       F   G  V  +
Sbjct: 501 DNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKF--AGESVEEI 558

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
           + G  HV  L S   V+TWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 559 ACGAYHVAVLTSKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDRHVKYIAC 612



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 21/296 (7%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           I  PR +E+   +   Q+  G+     +T +G + T G  + G+LGHG   +   P+ + 
Sbjct: 267 ILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPRLVE 326

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            +    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I     +
Sbjct: 327 AMAST-TVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI-AGPLE 384

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS---- 375
           G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P   E LS L++    
Sbjct: 385 GLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVA 444

Query: 376 ----HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
               H A  +     ++   V +G ++ +G      LG  D+   D  L P  + SL   
Sbjct: 445 CGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK---DARLEPTCVPSLIED 501

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 484
           +  +I+ G   TV +T  GR+F  G     QLG+    G   CL   +   + +EE
Sbjct: 502 NFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKFAGESVEE 557



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 19/252 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           +T G +HT LI+++  +F+ G    GVLGHG    + VS+ R +   S    + V+    
Sbjct: 391 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENVSYPREVESLSGLRTIAVACGVW 448

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A +++           SG++FT GD      GH D +  +  P  V +L      ++ 
Sbjct: 449 HTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARL-EPTCVPSLIEDNFHRIA 507

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V T GS  +GQLG+  + D   P  +       SV +IA G  ++ 
Sbjct: 508 CGHSLTVGLTTSGRVFTMGSTVYGQLGNPQS-DGKLPCLVEDKFAGESVEEIACGAYHVA 566

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +T    V+++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+    
Sbjct: 567 VLTSKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDR--HVKYIACGSNYSSAICLHK 624

Query: 344 YVYTWGKGYCGA 355
           +V    +  C A
Sbjct: 625 WVSGAEQSQCSA 636



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L PR +++     + V++++ G +H   +   G ++TWG+   G LGHG   +   P 
Sbjct: 266 DILLPRPLES--NVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPR 323

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 427
            + ++ S     V   +  T  +   G +Y +G  G  + G    G       P RI   
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRIAGP 382

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           L    V+ ++ G +HT ++T  G+LF FGD     LGH        P E+
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREV 432


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 171/367 (46%), Gaps = 30/367 (8%)

Query: 132 VFSCGSSLC-GVLGHGPE-TTQCV---SFTRINFPSAAHVV----QVSASENHAAFVLQS 182
           V+  G  LC  V   G E    CV   S   I  P  ++VV     ++    HAA V + 
Sbjct: 236 VYIWGEVLCDNVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVRHAALVSRQ 295

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           G+VFT G+ S    GH    + +  P+L+E+L       V  G   T  +T+ G ++T G
Sbjct: 296 GEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWG 354

Query: 243 SNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
             TH  G LGHG  +    PK I+ PLE +  +  ++ GP +   +T  G +++FG G+ 
Sbjct: 355 DGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHTALITSTGQLFTFGDGTF 413

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------DSSGYVYTW 348
             LGHG++     PR +++    G+  + V+ G  H  A+            SSG ++TW
Sbjct: 414 GVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTW 471

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G G    LGHGD+  +  P  +S+L  H   +V      T  L  +G VY  G   +G L
Sbjct: 472 GDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQL 531

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
           G P+   +D  L   + D L    V +I+ G YH  V+T R  +F +G     +LGH  +
Sbjct: 532 GNPN---ADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDI 588

Query: 469 RGCLEPT 475
                P+
Sbjct: 589 EDRKAPS 595



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 131/285 (45%), Gaps = 21/285 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           ++E+ A   +  +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI+ P
Sbjct: 322 LIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRISGP 380

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                +  VS    H A +  +GQ+FT GD +    GH D    +F PR VE+L G+   
Sbjct: 381 LEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGD-KETVFYPREVESLSGLRTI 439

Query: 221 QVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V  G+     +              G + T G     +LGHGD   R  P  ++ L + 
Sbjct: 440 AVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALID- 498

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
            +  ++A G S  + +T +G VY+ GS     LG+     +L P  ++    K   V  +
Sbjct: 499 HTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLIKDC-VEEI 556

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           + G  HV  L S   V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 557 ACGAYHVAVLTSRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLK 601



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 142/312 (45%), Gaps = 24/312 (7%)

Query: 189 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
            + ++ C G R     +  P+ +E+   +    +  G+     ++ +G V T G  + G+
Sbjct: 252 AEKNATCVGSRSD---VLIPKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGR 308

Query: 249 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGE 306
           LGHG   D   P+ I  L    SV  +A G  +  AVT  G +Y++G G++    LGHG 
Sbjct: 309 LGHGMGKDVTGPQLIESLAAT-SVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGT 367

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
                 P+ I +   +G+ +  VS G  H   + S+G ++T+G G  G LGHGD+     
Sbjct: 368 DVSHWIPKRI-SGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFY 426

Query: 367 P---EPLSSLKS--------HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           P   E LS L++        H A  V     ++   + +G ++ +G      LG  D+  
Sbjct: 427 PREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDK-- 484

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CL 472
            +  L+P  + +L  H   +++ G   TV +T  G+++  G     QLG+    G   CL
Sbjct: 485 -ESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCL 543

Query: 473 EPTEIFIQEMEE 484
              ++    +EE
Sbjct: 544 VEDKLIKDCVEE 555



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 19/252 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           ++ G +HT LI+++  +F+ G    GVLGHG + T  V + R +   S    + V+    
Sbjct: 389 VSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVW 446

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           HAA +++           SG++FT GD      GH D    + +P  V AL      +V 
Sbjct: 447 HAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRL-KPTCVSALIDHTFHRVA 505

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V+T GS  +GQLG+ +  D   P  +        V +IA G  ++ 
Sbjct: 506 CGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLIKDCVEEIACGAYHVA 564

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +T    V+++G G+N  LGHG+  D   P  + T + +  HV  ++ G     A+    
Sbjct: 565 VLTSRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKER--HVKNIACGSNFTAAICLHK 622

Query: 344 YVYTWGKGYCGA 355
           +V    +  C A
Sbjct: 623 WVSGTEQSQCSA 634



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 7/189 (3%)

Query: 291 VYSFGSGSNF-CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
           V  FG+  N  C+G   + D L P+ +++     +H   ++ G  H   +   G V+TWG
Sbjct: 247 VAKFGAEKNATCVG--SRSDVLIPKPLESNVVLDVH--HIACGVRHAALVSRQGEVFTWG 302

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           +   G LGHG   D T P+ + SL +     V   +  T  +  TG +Y +G  G  + G
Sbjct: 303 EASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWG-DGTHNAG 361

Query: 410 FPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
               G       P RI   L    ++ +S G +HT ++T  G+LF FGD     LGH   
Sbjct: 362 LLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDK 421

Query: 469 RGCLEPTEI 477
                P E+
Sbjct: 422 ETVFYPREV 430


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 162/330 (49%), Gaps = 24/330 (7%)

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 210
           C+    + F     V  +S    HA  V + G++++ G+ S    GH  D + P  +P+L
Sbjct: 343 CLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP--QPKL 400

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 267
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G LGHG+ +    PK +  PLE
Sbjct: 401 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 460

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 461 GI-HVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESL--KGLRTV 517

Query: 328 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L  
Sbjct: 518 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVE 577

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               Q+      T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +
Sbjct: 578 PNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQ---ADGMLPVRVEGKLHKNFVEE 634

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 635 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 664



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 132/274 (48%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+S  G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 412 VACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP-KRVNGPLEGIHVSAISCG 470

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 471 PWHTAIVTSAGQLFTFGDGSFGVLGHGD-RQSLSVPREVESLKGLRTVRAACGVWHTAAV 529

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  QIA G  
Sbjct: 530 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP-NFCQIACGHC 588

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 589 MTVALTTSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 646

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  D++ P  + SLK
Sbjct: 647 SRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLK 680



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 357 VQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELV--AC 414

Query: 332 GDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 385
           G+ H  A+  SG +YTWG G    G LGHG+E+   +P+    PL  +  H++   C   
Sbjct: 415 GEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGI--HVSAISCG-P 471

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 472 WHTAIVTSAGQLFTFGDGSFGVLGHGDR---QSLSVPREVESLKGLRTVRAACGVWHTAA 528

Query: 446 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 529 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPT 570



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 145/347 (41%), Gaps = 33/347 (9%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 174
           GR+ TL+     ++S G    G LGHG     P+     +   +N      +  V+  E 
Sbjct: 364 GRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMN------IELVACGEY 417

Query: 175 HAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           H   V  SG ++T G+ +S     GH +        R+   L+G+    ++ G   T  +
Sbjct: 418 HTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIV 477

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPS 280
           T  G + T G  + G LGHGD      P+ +  L+               +VV++  G +
Sbjct: 478 TSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVG-N 536

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
              +   +G ++++G G    LGHG++   L P  +        +  +++ G    VAL 
Sbjct: 537 SSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP--NFCQIACGHCMTVALT 594

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYG 399
           +SG+VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY 
Sbjct: 595 TSGHVYTMGSPVYGQLGN-PQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYT 653

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           +G    G LG    G +D    P +++SL+   V  +  G+  T  +
Sbjct: 654 WGKGANGRLGH---GDTDDRSSPTLVESLKDKQVRTVVCGINFTAAI 697



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 467 ISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRAACGVW 524

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D +  +  P  V AL      Q+
Sbjct: 525 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV-PTCVAALVEPNFCQI 583

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAA 277
             G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ 
Sbjct: 584 ACGHCMTVALTTSGHVYTMGSPVYGQLGN------PQADGMLPVRVEGKLHKNFVEEISC 637

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           G  ++  +T    VY++G G+N  LGHG+  D   P  +++ + K +  V
Sbjct: 638 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTV 687



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 6/175 (3%)

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G + D L P+ ++ F  K + V  +S G  H   +   G +Y+WG+   G LGHG + D 
Sbjct: 338 GVKMDCLIPKPLE-FAVK-LDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDV 395

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRP 422
             P+ + +L +     V   +  T  +  +G +Y  G G    G LG  +  VS  V + 
Sbjct: 396 PQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNE-VSHWVPK- 453

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           R+   L   HVS IS G +HT +VT  G+LF FGD     LGH   +    P E+
Sbjct: 454 RVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREV 508



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 10/177 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGHG + T+
Sbjct: 515 RTVRAACGVWHTAAVVE--------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTR 566

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T +      +  Q++        +  SG V+T G       G+   +  +   R+ 
Sbjct: 567 LVP-TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADG-MLPVRVE 624

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
             L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  L++
Sbjct: 625 GKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKD 681



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 9/130 (6%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQ 168
           N  QI  G   T+ ++ S  V++ GS + G LG+     Q      +      H   V +
Sbjct: 579 NFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGN----PQADGMLPVRVEGKLHKNFVEE 634

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           +S    H A +    +V+T G  ++   GH DT+     P LVE+LK    + V  G+NF
Sbjct: 635 ISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RSSPTLVESLKDKQVRTVVCGINF 693

Query: 229 TGFLTIRGHV 238
           T  + I   V
Sbjct: 694 TAAICIHKWV 703


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 156/315 (49%), Gaps = 22/315 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G+VF+ G+ S    GH   +  +  P+L+++L  +  + V  G
Sbjct: 306 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDSLSNINIELVACG 364

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 365 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 423

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT +G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 424 AVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEV 481

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G  G LGHGD+  K +P  +++L      QV      T  
Sbjct: 482 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVA 541

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  +G VY  G   +G LG P    +D  L  R+   L    V +I+ G YH  V+T + 
Sbjct: 542 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKT 598

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G     +LGH
Sbjct: 599 EVYTWGKGANGRLGH 613



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG E +  V   R+N P    HV  +S  
Sbjct: 361 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 419

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  SGQ+FT GD +    GH D  + +  PR VE+LKG+   +   G+  T  +
Sbjct: 420 PWHTAVVTSSGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAV 478

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G S
Sbjct: 479 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCQVACGHS 537

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D   P  ++    K   V  ++ G  HV  L 
Sbjct: 538 LTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGRLSKSF-VEEIACGAYHVAVLT 595

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 596 SKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALK 629



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 117/244 (47%), Gaps = 27/244 (11%)

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G G  LD   PK++     V  V  IA G  +   VT  G V+S+G  S   LGHG   D
Sbjct: 285 GFGVKLDSLLPKALESTV-VLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD 343

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 367
            L P+ I +     I++  V+ G+ H  A+  SG +YTWG G    G LGHG+E+   +P
Sbjct: 344 VLHPKLIDSL--SNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 401

Query: 368 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
           +    PL  +  H++   C     T V+  +G ++ FG   FG LG  DR     V  PR
Sbjct: 402 KRVNGPLEGI--HVSSISCG-PWHTAVVTSSGQLFTFGDGTFGVLGHGDR---KSVSIPR 455

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 471
            ++SL+     + + G++HT  V +             G+LF +GD ++ +LGH      
Sbjct: 456 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 515

Query: 472 LEPT 475
           L PT
Sbjct: 516 LVPT 519



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D   PK I  L 
Sbjct: 295 PKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLS 354

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
            + ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 355 NI-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 412

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + SSG ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 413 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 472

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 473 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 529

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 530 CQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL 568



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT ++++S  +F+ G    GVLGHG    + VS  R +        V+ +    
Sbjct: 416 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKGLRTVRAACGVW 473

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 474 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 532

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 533 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGRLSKSFVEEIACGAYHV 591

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 592 AVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSI 636



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 8/178 (4%)

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           G G + D L P+A+++     + V  ++ G  H   +   G V++WG+   G LGHG + 
Sbjct: 285 GFGVKLDSLLPKALESTVV--LDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDS 342

Query: 363 DKTLPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKV 419
           D   P+ + SL S++ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V
Sbjct: 343 DVLHPKLIDSL-SNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWV 400

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            + R+   L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 401 PK-RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREV 457



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 13/195 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGHG +  +
Sbjct: 464 RTVRAACGVWHTAAVVE--------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 515

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T +      +  QV+   +    +  SG V+T G       G+   +  +  P  V
Sbjct: 516 LVP-TCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL--PNRV 572

Query: 212 EA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           E  L     +++  G      LT +  V+T G   +G+LGHGDT DR  P  +  L++  
Sbjct: 573 EGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKD-K 631

Query: 271 SVVQIAAGPSYMLAV 285
            V  IA G ++  A+
Sbjct: 632 QVKSIACGTNFTAAI 646



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 3/127 (2%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N  Q+  G   T+ ++ S  V++ GS + G LG+ P+    +        S + V +++ 
Sbjct: 528 NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGRLSKSFVEEIAC 586

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H A +    +V+T G  ++   GH DT+   F P LVEALK    K +  G NFT  
Sbjct: 587 GAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNF-PSLVEALKDKQVKSIACGTNFTAA 645

Query: 232 LTIRGHV 238
           + +   V
Sbjct: 646 ICLHKWV 652


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 154/316 (48%), Gaps = 26/316 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    HAA V + G+VF+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 125 VQQIACGVRHAALVTRQGEVFSWGEESGGRLGH-GVDADVAHPQLIDSLASSTVQYVACG 183

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
              +  +T  G ++T G  TH  G LGHG+ +   TPK +  PLE V  V  +A GP + 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGV-RVSSVACGPWHT 242

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
           + VT  G ++SFG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESL--KGLKTLRAACGPWHTAAVVEV 300

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                      SG ++TWG G    LGHGD+  K +P  +++L  H   QV      T  
Sbjct: 301 MSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVA 360

Query: 391 LVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
           L  TG +Y  G + +G LG P   G    VLR      L    + ++S G YH   +T +
Sbjct: 361 LTTTGHLYTMGSVSYGQLGDPQATGRLPGVLR------LGRTLIEEVSCGAYHVAALTSK 414

Query: 450 GRLFGFGDNERAQLGH 465
           G +  +G     +LGH
Sbjct: 415 GDVCTWGKGANGRLGH 430



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 135/294 (45%), Gaps = 21/294 (7%)

Query: 206 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           F PR V +L  +  +Q+  G+     +T +G V + G  + G+LGHG   D   P+ I  
Sbjct: 112 FLPRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 266 LEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRK 322
           L    S VQ +A G  +  AVT +G +Y++G G+ NF  LGHG       P+ +     +
Sbjct: 172 L--ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGG-PLE 228

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V  V+ G  H V + S+G ++++G G  G LGHGD    ++P  + SLK    ++  
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAA 288

Query: 383 ARKRKTFVLVDTGSVYG----------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
                T  +V+  S Y           F W G G       G  ++ L P  + +L  H+
Sbjct: 289 CGPWHTAAVVEVMSRYSNAGSSLSGKLFTW-GDGDKNRLGHGDKEQKLVPTCVAALVDHN 347

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT----LRGCLEPTEIFIQEM 482
             Q++ G   TV +T  G L+  G     QLG       L G L      I+E+
Sbjct: 348 FRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVLRLGRTLIEEV 401



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 135/293 (46%), Gaps = 24/293 (8%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           ++++ A + +Q +  G YH+  ++ S     +  G+   G+LGHG   +      R+  P
Sbjct: 168 LIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTP-KRVGGP 226

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V  V+    H   V  +GQ+F+ GD +    GH D  +    PR VE+LKG+   
Sbjct: 227 LEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGD-RKSASMPREVESLKGLKTL 285

Query: 221 QVTAGLNFTGFL------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
           +   G   T  +            ++ G + T G     +LGHGD   +  P  +A L +
Sbjct: 286 RAACGPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVD 345

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
             +  Q+A G S  +A+T  G +Y+ GS S   LG  +    L P  ++  R     +  
Sbjct: 346 -HNFRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRL-PGVLRLGR---TLIEE 400

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           VS G  HV AL S G V TWGKG  G LGHGD  D+ +P  + +L+     +V
Sbjct: 401 VSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKV 453



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 22/252 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 163
           +  G +HT+L++++  +FS G    GVLGHG       P   + +   +    +      
Sbjct: 235 VACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHT 294

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A VV+V +  ++A   L SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 295 AAVVEVMSRYSNAGSSL-SGKLFTWGDGDKNRLGHGDKEQKLV-PTCVAALVDHNFRQVA 352

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSY 281
            G + T  LT  GH++T GS ++GQLG      R     +  +  +G  +  +++ G  +
Sbjct: 353 CGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGR-----LPGVLRLGRTLIEEVSCGAYH 407

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           + A+T  G V ++G G+N  LGHG+  D   P  ++  R K +  V   +     + L  
Sbjct: 408 VAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAICLHK 467

Query: 342 SGYVYTWGKGYC 353
           SG     G   C
Sbjct: 468 SGPGVGTGNSMC 479



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 6/171 (3%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D   PRA+++     + V +++ G  H   +   G V++WG+   G LGHG + D   P+
Sbjct: 110 DAFLPRAVRSLVV--LDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQ 167

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            + SL S     V   +  +  +  +G +Y  G G   FG LG  +  +S    + R+  
Sbjct: 168 LIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGN-NISHWTPK-RVGG 225

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            L    VS ++ G +HTV+VT  G+LF FGD     LGH   +    P E+
Sbjct: 226 PLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREV 276


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 167/338 (49%), Gaps = 10/338 (2%)

Query: 131 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           +++  G++  G LG G  E  Q +   ++++  A  VV+V    +H  F+ + G+++ CG
Sbjct: 2   AIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
           +N     GH     P  RP+ + +L+      ++ G   +  LT  G V + GSN  GQL
Sbjct: 62  NNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQL 121

Query: 250 GH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
           GH  +   +PTP+ I  +     VVQIA+G  + LA+T NG +Y++GS S   LG G   
Sbjct: 122 GHDAENGRQPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTS 180

Query: 309 DEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           +++  P  IQ+    G+ +  ++ G  H  A+  SG ++ WGK   G LG  D   +  P
Sbjct: 181 EKVPMPTLIQSL--AGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYP 238

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
             L +L+S     +      +  L + G V+  G   FG LG    G     + PR +  
Sbjct: 239 TQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLG---HGSCSNEIVPRKVFE 295

Query: 428 LRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 464
           L    ++QI+ G  HT+  V  RG+++GFG     QLG
Sbjct: 296 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLG 333



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 146/304 (48%), Gaps = 6/304 (1%)

Query: 109 TSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 167
           + A   +++  G  HTL ++    +++CG++  G LGH  +T       R+       + 
Sbjct: 33  SQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIIT 92

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            +S    H+  +   GQVF+ G N+    GH   N     PR+++A+      Q+ +G  
Sbjct: 93  CISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQY 152

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               LT  G ++  GSN++GQLG G T ++ P P  I  L  V  +  IA G ++  AV+
Sbjct: 153 HCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV-PIAFIACGGNHSFAVS 211

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++ +G  +   LG  + +    P  ++T R  G+    +S GD+  V L + G V+
Sbjct: 212 KSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRY--ISCGDDFSVFLTNEGGVF 269

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGF 405
           T G G  G LGHG   ++ +P  +  L      Q+   +R T   V + G +YGFG  G 
Sbjct: 270 TCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGV 329

Query: 406 GSLG 409
           G LG
Sbjct: 330 GQLG 333



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 5/245 (2%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H+L ++N   VFS GS+  G LGH  E  +  +   I    A HVVQ+++ + H
Sbjct: 94  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 153

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              +  +G+++  G NS    G   T+  +  P L+++L GVP   +  G N +  ++  
Sbjct: 154 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 213

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ G
Sbjct: 214 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLTNEGGVFTCG 272

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 354
           +G+   LGHG   +E+ PR +  F   G  + +++ G  H +A + S G +Y +G G  G
Sbjct: 273 AGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVG 330

Query: 355 ALGHG 359
            LG G
Sbjct: 331 QLGIG 335



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 9/244 (3%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           ++  G+  HG+LG G   +     P+ +    +   VV++  G S+ L +T  G +Y+ G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKM-DWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 354
           +  +  LGH    D L  +  Q       +++  +S G  H +AL + G V++WG    G
Sbjct: 62  NNDHGQLGH--DLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVG 119

Query: 355 ALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LGH  E  +   P  + ++ +   VQ+ + +     L + G +Y +G   +G LG    
Sbjct: 120 QLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGT- 178

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
             S+KV  P ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L     
Sbjct: 179 -TSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCY 237

Query: 474 PTEI 477
           PT++
Sbjct: 238 PTQL 241



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 108/215 (50%), Gaps = 6/215 (2%)

Query: 106 IVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           I    A + +QI +G+YH L L +N  +++ GS+  G LG G  + +    T I   +  
Sbjct: 136 IKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV 195

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            +  ++   NH+  V +SG +F  G N+    G  D N   + P  +  L+ +  + ++ 
Sbjct: 196 PIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCY-PTQLRTLRSLGVRYISC 254

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYML 283
           G +F+ FLT  G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + L
Sbjct: 255 GDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTL 312

Query: 284 A-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           A V   G +Y FG G    LG G   +   P+ ++
Sbjct: 313 AFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVR 347



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 5/140 (3%)

Query: 345 VYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           +Y WG    G LG G  +E    +P  +   ++   V+V      T  L   G +Y  G 
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
              G LG     + +K  RP+ L SL  + ++ IS G  H++ +T+ G++F +G N   Q
Sbjct: 63  NDHGQLGHDLDTLPNK--RPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ 120

Query: 463 LGHDTLRGCLEPTEIFIQEM 482
           LGHD   G  +PT   I+ +
Sbjct: 121 LGHDAENG-RQPTPRMIKAI 139


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 137/261 (52%), Gaps = 10/261 (3%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           K+V  G   T FL   G V++CG N  GQLGH      P P  +A L E   +  IA G 
Sbjct: 37  KEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAP--VATLAE-EHIKHIACGQ 93

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
           S+ LA++  G +YS+G+G++  LGH   +H    PR I+   ++ I   ++S GD+H +A
Sbjct: 94  SHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQ--QMSCGDDHCLA 151

Query: 339 LDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           L   G ++TWG+   G LG G+  I ++ P+ + SL+     QV A    +F L  +G+V
Sbjct: 152 LGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAV 211

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           +G+G    G LG  D  V +    P  +  LR H V  IS G  HT ++T  G LF FG 
Sbjct: 212 FGWGKNSAGQLGLNDEQVKET---PCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGA 268

Query: 458 NERAQLGHDTLRGCLEPTEIF 478
               QLGHD+L   + P  + 
Sbjct: 269 GGSGQLGHDSLHNEINPRRVL 289



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 160/334 (47%), Gaps = 15/334 (4%)

Query: 136 GSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G S  G LG+G      VS      F  A  V +V+    H  F+++ GQV++CG N   
Sbjct: 5   GHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
             GH         P  V  L     K +  G + +  L+++G++++ G+   GQLGH  T
Sbjct: 65  QLGHSHEGT---HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHA-T 120

Query: 255 LDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DEL 311
           ++  +  P+ I  L +   + Q++ G  + LA+  +G ++++G  ++  LG G     + 
Sbjct: 121 VEHYSRIPRIIKKLSQ-QKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQS 179

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
            P+ +++   +GI + +V+AG  H  AL  SG V+ WGK   G LG  DE  K  P  + 
Sbjct: 180 SPQKVKSL--EGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVK 237

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
            L++H  V +   +  T +L   G ++ FG  G G LG          + PR +  L   
Sbjct: 238 PLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSL---HNEINPRRVLELMGS 294

Query: 432 HVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 464
            VSQI+ G  HT+  V   G L+ FG  +  QLG
Sbjct: 295 EVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLG 328



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 143/297 (48%), Gaps = 9/297 (3%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G  HTL L+ +  V+SCG +  G LGH  E T       +   +  H+  ++  ++
Sbjct: 38  EVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAPVATL---AEEHIKHIACGQS 94

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  +   G +++ G  +    GH         PR+++ L     +Q++ G +    L  
Sbjct: 95  HSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGD 154

Query: 235 RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            G + T G NTHGQLG G+  + + +P+ +  LE +  + Q+ AG S+  A++ +G V+ 
Sbjct: 155 DGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGI-PLAQVTAGGSHSFALSLSGAVFG 213

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G  S   LG  ++  +  P  ++  R     VV +S G+EH   L  +G ++T+G G  
Sbjct: 214 WGKNSAGQLGLNDEQVKETPCHVKPLRTH--KVVYISCGEEHTAILTKAGGLFTFGAGGS 271

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           G LGH    ++  P  +  L      Q+ C RK     +  +G++Y FG    G LG
Sbjct: 272 GQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLG 328



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 109/269 (40%), Gaps = 53/269 (19%)

Query: 102 HSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 160
           H + +   +  +   I  G+ H+L +S   +++S G+   G LGH            I  
Sbjct: 74  HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKK 133

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
            S   + Q+S  ++H   +   GQ+FT G N+    G  +       P+ V++L+G+P  
Sbjct: 134 LSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLA 193

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL-------------- 266
           QVTAG + +  L++ G V   G N+ GQLG  D   + TP  + PL              
Sbjct: 194 QVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEH 253

Query: 267 ------------------------------------EEVGS-VVQIAAGPSYMLA-VTGN 288
                                               E +GS V QIA G  + LA V  +
Sbjct: 254 TAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSS 313

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           G +Y+FG G    LG G +++   P  ++
Sbjct: 314 GTLYAFGCGDLGQLGTGHENNVKCPTVVK 342



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 9/125 (7%)

Query: 348 WGKGYCGALGHGDEIDKTLPEPLS---SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           WG    G LG+G  +   + EP +   SL + +    C  K   F++ D G VY  GW G
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMED-GQVYSCGWNG 62

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG    G       P  + +L   H+  I+ G  H++ ++ +G L+ +G     QLG
Sbjct: 63  EGQLGHSHEGT-----HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLG 117

Query: 465 HDTLR 469
           H T+ 
Sbjct: 118 HATVE 122


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 168/353 (47%), Gaps = 13/353 (3%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            SSV   GS   G LG G    + V+  R I       VV ++    H  FV + G+V +
Sbjct: 8   KSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLS 67

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
           CG+N     GH    +P  RP L+++L      Q ++G   +  LT  G V T GSN   
Sbjct: 68  CGNNDYGQLGHE---KPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDN 124

Query: 248 QLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           QLG G  D+     P+ +  L +   VVQ+A G ++ + +T  G +Y++GS ++  LG  
Sbjct: 125 QLGRGQVDSASTSIPRMVRGLAD-HKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLA 183

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
            +  + +P+ +      G+ +VRV+AG +H + L  SG ++ WG    G LG GD+ D+ 
Sbjct: 184 NKTPQNEPQWVSCI--SGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRG 241

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            P  + +L++     +      +  L   G V+ FG   +G LG      S+  L PR +
Sbjct: 242 APTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLG---HNTSNNELLPRKV 298

Query: 426 DSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             L    V+QI+ G  H++  V   GR++ FG     QLG  +    + P  +
Sbjct: 299 FELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMV 351



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 145/298 (48%), Gaps = 9/298 (3%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G  HTL +  +  V SCG++  G LGH      C     I+     +V+Q S+  
Sbjct: 47  VHIACGLQHTLFVKKDGRVLSCGNNDYGQLGH---EKPCKRPALIDSLGERNVLQASSGT 103

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  +  +GQVFT G N     G    +      PR+V  L      QV  G   T  L
Sbjct: 104 KHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGL 163

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G ++T GSN HGQLG  +   +  P+ ++ +  +  +V++AAG  + L +T +G ++
Sbjct: 164 TATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGL-PIVRVAAGADHNLVLTISGALF 222

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  S   LG G+  D   P  ++T R +GI    ++ GD+H +AL   G V+T+G G 
Sbjct: 223 AWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGI--CALACGDDHSLALTRDGGVFTFGAGM 280

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            G LGH    ++ LP  +  L      Q+ C RK     +  +G VY FG  G G LG
Sbjct: 281 YGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLG 338



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 135/258 (52%), Gaps = 7/258 (2%)

Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVS 170
           N +Q ++G  H+ +++++  VF+ GS+    LG G   +   S  R+    A H VVQV+
Sbjct: 95  NVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVA 154

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               H   +  +GQ++T G N+    G  +   P   P+ V  + G+P  +V AG +   
Sbjct: 155 CGSAHTVGLTATGQIYTWGSNNHGQLGLANKT-PQNEPQWVSCISGLPIVRVAAGADHNL 213

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            LTI G +   G N+ GQLG GD  DR  P  +  L   G +  +A G  + LA+T +G 
Sbjct: 214 VLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQG-ICALACGDDHSLALTRDGG 272

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWG 349
           V++FG+G    LGH   ++EL PR +  F   G  V +++ G +H +A + SSG VY +G
Sbjct: 273 VFTFGAGMYGQLGHNTSNNELLPRKV--FELMGSSVTQIACGRKHSIAYVPSSGRVYVFG 330

Query: 350 KGYCGALGHGDEIDKTLP 367
            G  G LG G  +++  P
Sbjct: 331 LGGNGQLGTGSTVNRMSP 348



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 136/277 (49%), Gaps = 18/277 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           PR + +   V    +  GL  T F+   G V +CG+N +GQLGH     RP     A ++
Sbjct: 35  PREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCKRP-----ALID 89

Query: 268 EVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            +G  +V+Q ++G  +   +T  G V+++GS  +  LG G Q D       +  R    H
Sbjct: 90  SLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRG-QVDSASTSIPRMVRGLADH 148

Query: 326 -VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
            VV+V+ G  H V L ++G +YTWG    G LG  ++  +  P+ +S +     V+V A 
Sbjct: 149 KVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAG 208

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
                VL  +G+++ +G   FG LG     DRG       P ++ +LR   +  ++ G  
Sbjct: 209 ADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGA------PTLVKTLRNQGICALACGDD 262

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           H++ +T  G +F FG     QLGH+T    L P ++F
Sbjct: 263 HSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKVF 299



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 108/235 (45%), Gaps = 12/235 (5%)

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           ++  V   GS THGQLG G   +     P+ I     V  VV IA G  + L V  +G V
Sbjct: 7   LKSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNV-EVVHIACGLQHTLFVKKDGRV 65

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            S G+     LGH +     +P  I +   +  +V++ S+G +H   L  +G V+TWG  
Sbjct: 66  LSCGNNDYGQLGHEKPCK--RPALIDSLGER--NVLQASSGTKHSTVLTDAGQVFTWGSN 121

Query: 352 YCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               LG G  D    ++P  +  L  H  VQV      T  L  TG +Y +G    G LG
Sbjct: 122 EDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLG 181

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             ++   ++   P+ +  +    + +++ G  H +V+T  G LF +G N   QLG
Sbjct: 182 LANKTPQNE---PQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLG 233


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 184/377 (48%), Gaps = 18/377 (4%)

Query: 110 SAGNQMQITTGRYH---TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAH 165
           SA  ++ I    +H    L+ ++++++  GS++ G LG G    + +   R ++F  A  
Sbjct: 3   SAPKRLCIKADTFHLPLKLIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATA 62

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++  E H   + + G+VF+CG+N S   GH    +P  R +++  L     KQ   G
Sbjct: 63  VEQIACGETHTVLITKDGEVFSCGNNDSGQLGHE---KPTKRLQMIPGLDAFIFKQAACG 119

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 284
            + +  +   G +   GSN  GQLG G  L    TP+ +  L     VVQIA G  + LA
Sbjct: 120 ASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKAL-GTSIVVQIACGKKHTLA 178

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           +T NG +Y++GS S+  LG G+    E +P+ I       I +  ++ G  H + +  SG
Sbjct: 179 LTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITGL--ATIPIAFIACGGYHSIVVSKSG 236

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            V+ WG+   G LG  D  DK +P  L +L+ + +    C  +   F+ +D G V+  G 
Sbjct: 237 AVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMD-GGVFTCGA 295

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERA 461
             +G LG    G +   + PR +  L    V+QIS G  HT+ +V  RG+++ +G     
Sbjct: 296 GMYGQLG---HGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGGSG 352

Query: 462 QLGHDTLRGCLEPTEIF 478
           QLG  T R    P  + 
Sbjct: 353 QLGSQTARSVATPQMVL 369


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 156/324 (48%), Gaps = 21/324 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+Q++    HAA V + G++FT G+ S    GH    + + +P LVEAL       V  G
Sbjct: 344 VLQIACGVKHAALVTRQGEMFTWGEESGGRLGH-GVGKNVVQPCLVEALASSTVDFVACG 402

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 403 EFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVAFVTCGPWHT 461

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             +T  G +++FG G+   LGHG++ +   PR +++    G+  V V+ G  H  A+   
Sbjct: 462 ALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESL--SGLRTVSVACGVWHTAAIVEV 519

Query: 340 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                    SSG ++TWG G    LGHGD+  +  P  +S+L  +   ++      T  L
Sbjct: 520 IVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDYNFHRIACGHSLTVGL 579

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
             +G V+  G   +G LG P    SD  L   + D L    V +I+ G YH  V+T R  
Sbjct: 580 TTSGRVFTMGSTVYGQLGNPQ---SDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSRNE 636

Query: 452 LFGFGDNERAQLGHDTLRGCLEPT 475
           ++ +G     +LGH  +     PT
Sbjct: 637 VYTWGKGANGRLGHGDVEDRKTPT 660



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 128/282 (45%), Gaps = 21/282 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P     V  V+  
Sbjct: 399 VACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVAFVTCG 457

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A +  +GQ+FT GD +    GH D    I  PR VE+L G+    V  G+  T  +
Sbjct: 458 PWHTALITSTGQLFTFGDGTFGVLGHGDREN-ISYPREVESLSGLRTVSVACGVWHTAAI 516

Query: 233 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                         G + T G     +LGHGD   R  P  I+ L +  +  +IA G S 
Sbjct: 517 VEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDY-NFHRIACGHSL 575

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +T +G V++ GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 576 TVGLTTSGRVFTMGSTVYGQLGN-PQSDGKLPCLVED-KLAGECVEEIACGAYHVTVLTS 633

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 634 RNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIAC 675



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 132/295 (44%), Gaps = 22/295 (7%)

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N S+C    D    I  P+ +E+   +   Q+  G+     +T +G + T G  + G+LG
Sbjct: 320 NVSYCSPRTD----ILLPKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLG 375

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 308
           HG   +   P  +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG   
Sbjct: 376 HGVGKNVVQPCLVEALAS-STVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDV 434

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
               P+ I     +G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P 
Sbjct: 435 SHWIPKRI-AGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPR 493

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSD 417
            + SL     V V      T  +V+           +G ++ +G      LG  D+   D
Sbjct: 494 EVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDK---D 550

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
             L P  + +L  ++  +I+ G   TV +T  GR+F  G     QLG+    G L
Sbjct: 551 ARLEPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKL 605



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 19/236 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           +T G +HT LI+++  +F+ G    GVLGHG    + +S+ R +   S    V V+    
Sbjct: 454 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENISYPREVESLSGLRTVSVACGVW 511

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A +++           SG++FT GD      GH D +  +  P  + AL      ++ 
Sbjct: 512 HTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARL-EPTCISALIDYNFHRIA 570

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V T GS  +GQLG+  + D   P  +        V +IA G  ++ 
Sbjct: 571 CGHSLTVGLTTSGRVFTMGSTVYGQLGNPQS-DGKLPCLVEDKLAGECVEEIACGAYHVT 629

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 630 VLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYSAAI 683



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 6/157 (3%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQV 381
           + V++++ G +H   +   G ++TWG+   G LGHG  + K + +P  + +L S     V
Sbjct: 342 LDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHG--VGKNVVQPCLVEALASSTVDFV 399

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 440
              +  T  +   G +Y +G  G  + G    G       P RI   L    V+ ++ G 
Sbjct: 400 ACGEFHTCAVTMAGEIYTWG-DGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGP 458

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +HT ++T  G+LF FGD     LGH        P E+
Sbjct: 459 WHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREV 495


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 164/365 (44%), Gaps = 27/365 (7%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  GR+HT  +  + +V++ G ++ G LG G  T +    T +  P    V  ++A   H
Sbjct: 62  VAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTER---HTPVQVPGLTGVTAIAAGRRH 118

Query: 176 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
              V Q G V+  GDN     G     D + P+  P L           + AG   T  +
Sbjct: 119 TFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTG------VTAIAAGRRHTFAV 172

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   G N  GQLG G   +R TP  +  L     V  IAAG  + LAV  +G V+
Sbjct: 173 RQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLT---GVTAIAAGDYHTLAVRQDGTVW 229

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G+ +   LG G   + L P  +         V  +SAG+ H VA+   G V+ WG   
Sbjct: 230 AWGNNALGQLGDGTYTERLTPVQVPGL----TGVTAISAGESHTVAVRQDGTVWAWGDNV 285

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G   D+  P  +  L    A  +   +R TF +   G+V+ +G   +G LG   
Sbjct: 286 WGQLGDGTRTDRLTPVQVPGLSGVTA--IAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGT 343

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           R  SD+ L P  +  L +  V+ I+ G YHT+ V   G ++ +GDN   QLG  T    L
Sbjct: 344 R--SDR-LTPVQVPDLTS--VTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRL 398

Query: 473 EPTEI 477
            P ++
Sbjct: 399 TPVQV 403



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 156/352 (44%), Gaps = 21/352 (5%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  GR HT  +  + +V++ G +  G LG G  T +    T +  P    V  ++A + H
Sbjct: 162 IAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNR---LTPVQVPGLTGVTAIAAGDYH 218

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V Q G V+  G+N+    G   T      P  V  L GV    ++AG + T  +   
Sbjct: 219 TLAVRQDGTVWAWGNNALGQLGD-GTYTERLTPVQVPGLTGVTA--ISAGESHTVAVRQD 275

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   G N  GQLG G   DR TP  +  L     V  IA G  +  AV  +G V+++G
Sbjct: 276 GTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLS---GVTAIAEGRRHTFAVRQDGTVWAWG 332

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                 LG G + D L P  +         V  ++AGD H +A+   G V+ WG    G 
Sbjct: 333 LNFWGQLGDGTRSDRLTPVQVPDL----TSVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQ 388

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G   D+  P  +  L    A  + A +  T  +   G+V+ +G   +G LG  D   
Sbjct: 389 LGDGTYTDRLTPVQVPGLTGVTA--IAAGESHTVAMRQDGTVWAWGDNVWGQLG--DGTY 444

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           +D+ L P  +  L +  V+ I+ G YHT+ V   G +  +G N   QLG  T
Sbjct: 445 TDR-LTPVQVPDLTS--VTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGT 493



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 165/377 (43%), Gaps = 26/377 (6%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHTL +  + +V++ G ++ G LG G  T +    T +  P    V  ++A E+H
Sbjct: 362 IAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDR---LTPVQVPGLTGVTAIAAGESH 418

Query: 176 AAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
              + Q G V+  GDN     G   + D   P+  P L           + AG   T  +
Sbjct: 419 TVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLTS------VTAIAAGDYHTLAV 472

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   G N +GQLG G +   P+P  +  L  V     +AAG S+ +AV  +G V+
Sbjct: 473 RQDGTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVW 532

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  ++  LG G   D   P  I         V  ++AG  H +A    G V++WG   
Sbjct: 533 AWGLNASGQLGDGATIDRRIPVQIPGL----AGVTAIAAGSAHTLAAGQDGAVWSWGANS 588

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G    +  P  +  L    A  + A    +  L+  G+V  +G   +G LG   
Sbjct: 589 YGQLGDGTTTHRLSPVQVPGLTGVSA--MAAGDAHSVALLQDGTVSAWGRNSWGQLG--- 643

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            G +   L P  +  L    V+ ++ G  HTV +   G ++ +G N+  QLG  T    L
Sbjct: 644 DGTTAARLTPVQVHGLTG--VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRL 701

Query: 473 EPTEIFIQEMEEDTGLA 489
            P +  +Q + + T +A
Sbjct: 702 APVQ--VQGLTDVTAIA 716



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 134/320 (41%), Gaps = 17/320 (5%)

Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
           +  P    V   +A E H   V Q G  +  G+N+    G   T      P  V  L GV
Sbjct: 1   MQVPGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGD-GTRTDRLTPVQVPGLTGV 59

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
               V AG + T  +   G V   G N  GQLG G   +R TP  +  L     V  IAA
Sbjct: 60  TA--VAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLT---GVTAIAA 114

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  +  AV+ +G V+++G      LG G + D   P  +Q     G  V  ++AG  H  
Sbjct: 115 GRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTP--VQLPELTG--VTAIAAGRRHTF 170

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           A+   G V+ WG    G LG G   ++  P  +  L    A  + A    T  +   G+V
Sbjct: 171 AVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVTA--IAAGDYHTLAVRQDGTV 228

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           + +G    G LG    G   + L P  +  L    V+ IS G  HTV V   G ++ +GD
Sbjct: 229 WAWGNNALGQLG---DGTYTERLTPVQVPGLTG--VTAISAGESHTVAVRQDGTVWAWGD 283

Query: 458 NERAQLGHDTLRGCLEPTEI 477
           N   QLG  T    L P ++
Sbjct: 284 NVWGQLGDGTRTDRLTPVQV 303



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 155/366 (42%), Gaps = 21/366 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT+ ++ + +V++ G +  G LG G    + +    +  P  A V  ++A   H
Sbjct: 515 LAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIP---VQIPGLAGVTAIAAGSAH 571

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
                Q G V++ G NS    G   T   +  P  V  L GV    + AG   +  L   
Sbjct: 572 TLAAGQDGAVWSWGANSYGQLGDGTTTHRL-SPVQVPGLTGVSA--MAAGDAHSVALLQD 628

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   G N+ GQLG G T  R TP  +  L     V  +AAG  + +A+  +G V+++G
Sbjct: 629 GTVSAWGRNSWGQLGDGTTAARLTPVQVHGLT---GVTAVAAGSLHTVALRQDGTVWAWG 685

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                 LG G     L P  +Q        V  ++AG  H VA+   G V+ WG    G 
Sbjct: 686 YNDLGQLGDGTTTRRLAPVQVQGL----TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQ 741

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G    ++ P  +  L    A  + A    T  +   G+V+ +G      LG    G 
Sbjct: 742 LGDGSSTARSTPVQVQELTGVSA--LAAGYAHTVAVKQDGTVWAWGNNSGTQLG---NGS 796

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           S     P  ++ L    VS ++ G +HT  V+  G  + +G N   Q+G  T      P 
Sbjct: 797 STDRYTPVWVEGLTG--VSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTADRPRPV 854

Query: 476 EIFIQE 481
           ++ IQE
Sbjct: 855 DVVIQE 860


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 167/349 (47%), Gaps = 14/349 (4%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRI--NFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           +F  G    G LG G    + +S  R+  N   +++V +VS   NH AF+ + G V+TCG
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            N     G   ++     P  V A++     +VT G   T  ++ +G V   G N++GQ+
Sbjct: 61  SNEFGQLGQEKSHT---NPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQI 117

Query: 250 GHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           G G  +       PK +  L ++ SVVQIA G ++ +A+T +G ++ +G  S+  LG G+
Sbjct: 118 GLGSKVKEKVQTIPKMLKGLAKM-SVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGK 176

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
            H  +   A       G+  + +SAG  H  AL SSG ++ WGK   G LG  D  D+ L
Sbjct: 177 THSSMSEPA-PVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPL 235

Query: 367 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           P  L SL+S     V   ++ T VL   G V+ FG    G LG      +     PR + 
Sbjct: 236 PTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLG---HNSNHHEYTPRKVF 292

Query: 427 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L    V+QI+ G  HT+ +V   GR++ FG     QLG      C  P
Sbjct: 293 ELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSP 341



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 148/281 (52%), Gaps = 17/281 (6%)

Query: 205 IFRPRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           I  PRL+E L+     ++V+ G N T FL   G V+TCGSN  GQLG   +     P+S+
Sbjct: 22  ISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNEFGQLGQEKS--HTNPESV 79

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-- 321
             +E   ++ ++  G ++ +AV+  G+V+++G  S   +G G +  E     +QT  +  
Sbjct: 80  HAIETF-TITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKE----KVQTIPKML 134

Query: 322 KGI---HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHL 377
           KG+    VV+++ G  H +AL  SG+++ WG    G LG G      + P P+ SL    
Sbjct: 135 KGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVP 194

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 437
            + + A    +F L  +G+++G+G   +G LG  D   +D+ L P +L SLR+  V  +S
Sbjct: 195 FMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHD--TTDRPL-PTLLKSLRSQGVCYVS 251

Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            G  HT V+T  G +F FG     QLGH++      P ++F
Sbjct: 252 CGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVF 292



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 128/248 (51%), Gaps = 7/248 (2%)

Query: 116 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSAS 172
           ++T G+ HT+ +S+   VF+ G +  G +G G +  + V          A   VVQ++  
Sbjct: 89  KVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACG 148

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            NH+  +  SG +F  GDNSS   G   T+  +  P  V +L GVP   ++AG   +  L
Sbjct: 149 CNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFAL 208

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           +  G +   G N +GQLG  DT DRP P  +  L   G V  ++ G  +   +T +G V+
Sbjct: 209 SSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQG-VCYVSCGEKHTAVLTSDGGVF 267

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 351
           +FG G++  LGH   H E  PR +  F   G  V +++ G  H +AL  SSG VYT+G+G
Sbjct: 268 TFGCGTSGQLGHNSNHHEYTPRKV--FELMGSVVTQIACGRAHTLALVPSSGRVYTFGRG 325

Query: 352 YCGALGHG 359
             G LG G
Sbjct: 326 GDGQLGLG 333



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 158/340 (46%), Gaps = 36/340 (10%)

Query: 95  RFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGH-----GPET 149
           R L+++E SS++ E S G         +   L  + +V++CGS+  G LG       PE+
Sbjct: 26  RLLENLEFSSNVREVSCG-------WNHTAFLCKDGTVYTCGSNEFGQLGQEKSHTNPES 78

Query: 150 TQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIF 206
              + +FT         + +V+  + H   V   G VF  GDNS      G +   +   
Sbjct: 79  VHAIETFT---------ITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQT 129

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPKSI 263
            P++++ L  +   Q+  G N +  LTI GH+   G N+ GQLG G T   +  P P  +
Sbjct: 130 IPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAP--V 187

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             L  V  ++ I+AG ++  A++ +G ++ +G      LG  +  D   P  +++ R +G
Sbjct: 188 LSLNGVPFML-ISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQG 246

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
             V  VS G++H   L S G V+T+G G  G LGH     +  P  +  L   +  Q+  
Sbjct: 247 --VCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIAC 304

Query: 384 RKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            +  T  LV  +G VY FG  G G LG    GV++    P
Sbjct: 305 GRAHTLALVPSSGRVYTFGRGGDGQLGL---GVTNNCNSP 341


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 152/316 (48%), Gaps = 21/316 (6%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            HAA V + G+VFT G+ S    GH    + +  P+L+E+L       V  G   T  +T
Sbjct: 282 KHAALVSRQGEVFTWGEASGGRLGH-GMGKDVTGPQLIESLAATSIDFVACGEFHTCAVT 340

Query: 234 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV 290
           + G ++T G  TH  G LGHG  +    PK I+ PLE +  +  ++ GP +   +T  G 
Sbjct: 341 MTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QIASVSCGPWHTALITSTGQ 399

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------- 339
           +++FG G+   LGHG++     PR +++    G+  + V+ G  H  A+           
Sbjct: 400 LFTFGDGTFGVLGHGDKETVFYPREVESL--SGLRTIAVACGVWHAAAIVEVIVTHSSSS 457

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
            SSG ++TWG G    LGHGD+  +  P  +S+L  H   +V      T  L  +G VY 
Sbjct: 458 VSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYT 517

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            G   +G LG P+   +D  L   + D L    V +I+ G YH  V+T R  +F +G   
Sbjct: 518 MGSTVYGQLGNPN---ADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGA 574

Query: 460 RAQLGHDTLRGCLEPT 475
             +LGH  +     PT
Sbjct: 575 NGRLGHGDVEDRKAPT 590



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 131/285 (45%), Gaps = 21/285 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           ++E+ A   +  +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI+ P
Sbjct: 317 LIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP-KRISGP 375

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                +  VS    H A +  +GQ+FT GD +    GH D    +F PR VE+L G+   
Sbjct: 376 LEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGD-KETVFYPREVESLSGLRTI 434

Query: 221 QVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V  G+     +              G + T G     +LGHGD   R  P  ++ L + 
Sbjct: 435 AVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALID- 493

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
            +  ++A G S  + +T +G VY+ GS     LG+     +L P  ++    K   V  +
Sbjct: 494 HTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKLTKDC-VEEI 551

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           + G  HV  L S   V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 552 ACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALK 596



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           ++ G +HT LI+++  +F+ G    GVLGHG + T  V + R +   S    + V+    
Sbjct: 384 VSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKET--VFYPREVESLSGLRTIAVACGVW 441

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           HAA +++           SG++FT GD      GH D   P  +P  V AL      +V 
Sbjct: 442 HAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGD-KEPRLKPTCVSALIDHTFHRVA 500

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V+T GS  +GQLG+ +  D   P  +        V +IA G  ++ 
Sbjct: 501 CGHSLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLTKDCVEEIACGAYHVA 559

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +T    V+++G G+N  LGHG+  D   P  +   + +  HV  ++ G     A+    
Sbjct: 560 VLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKER--HVKNIACGSNFTAAICLHK 617

Query: 344 YVYTWGKGYCGA 355
           +V    +  C A
Sbjct: 618 WVSGTEQSQCSA 629



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 18/289 (6%)

Query: 197 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 256
           G+  +   +  P+ +E+   +    +  G+     ++ +G V T G  + G+LGHG   D
Sbjct: 252 GYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKD 311

Query: 257 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPR 314
              P+ I  L    S+  +A G  +  AVT  G +Y++G G++    LGHG       P+
Sbjct: 312 VTGPQLIESLAAT-SIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPK 370

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            I +   +G+ +  VS G  H   + S+G ++T+G G  G LGHGD+     P  + SL 
Sbjct: 371 RI-SGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLS 429

Query: 375 SHLAVQVCARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
               + V         +V+            G ++ +G      LG  D+   +  L+P 
Sbjct: 430 GLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDK---EPRLKPT 486

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            + +L  H   +++ G   TV +T  G+++  G     QLG+    G L
Sbjct: 487 CVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKL 535



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 7/189 (3%)

Query: 291 VYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
           V  FG+  N  +G+ G + D L P+ +++     +H   ++ G +H   +   G V+TWG
Sbjct: 242 VTKFGADKN--IGYLGSRSDVLIPKPLESNVVLDVH--HIACGVKHAALVSRQGEVFTWG 297

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           +   G LGHG   D T P+ + SL +     V   +  T  +  TG +Y +G  G  + G
Sbjct: 298 EASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWG-DGTHNAG 356

Query: 410 FPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
               G       P RI   L    ++ +S G +HT ++T  G+LF FGD     LGH   
Sbjct: 357 LLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDK 416

Query: 469 RGCLEPTEI 477
                P E+
Sbjct: 417 ETVFYPREV 425


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 154/316 (48%), Gaps = 26/316 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H A V + G+VF+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 125 VQQIACGVRHTALVTRQGEVFSWGEESGGRLGH-GVDADVAHPQLIDSLASSTVQYVACG 183

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
              +  +T  G ++T G  TH  G LGHG+++   TPK +  PLE V  V  +A GP + 
Sbjct: 184 EYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGV-RVSSVACGPWHT 242

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
           + VT  G ++SFG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 243 VLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESL--KGLKTLRAACGPWHTAAVVEV 300

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                      SG ++TWG G    LGHGD+  K +P  +++L  H   QV      T  
Sbjct: 301 MSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVA 360

Query: 391 LVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
           L  TG +Y  G + +G LG P   G    VLR      L    + ++S G YH   +T +
Sbjct: 361 LTTTGHLYTMGSVSYGQLGDPQATGRLPGVLR------LGRTLIEEVSCGAYHVAALTSK 414

Query: 450 GRLFGFGDNERAQLGH 465
           G +  +G     +LGH
Sbjct: 415 GDVCTWGKGANGRLGH 430



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 136/294 (46%), Gaps = 21/294 (7%)

Query: 206 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           F PR V +L  +  +Q+  G+  T  +T +G V + G  + G+LGHG   D   P+ I  
Sbjct: 112 FLPRAVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 266 LEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRK 322
           L    S VQ +A G  +  AVT +G +Y++G G+ NF  LGHG       P+ +     +
Sbjct: 172 L--ASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGG-PLE 228

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V  V+ G  H V + S+G ++++G G  G LGHGD    ++P  + SLK    ++  
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAA 288

Query: 383 ARKRKTFVLVDTGSVYG----------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
                T  +V+  S Y           F W G G       G  ++ L P  + +L  H+
Sbjct: 289 CGPWHTAAVVEVMSRYSNAGSSLSGKLFTW-GDGDKNRLGHGDKEQKLVPTCVAALVDHN 347

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT----LRGCLEPTEIFIQEM 482
             Q++ G   TV +T  G L+  G     QLG       L G L      I+E+
Sbjct: 348 FRQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVLRLGRTLIEEV 401



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 157/349 (44%), Gaps = 26/349 (7%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  RSLV L   Q+       A ++R  Q E+ +    +  R+   + +      ++++
Sbjct: 114 PRAVRSLVVLDVQQIACGVRHTALVTR--QGEVFSWGEESGGRLGHGVDADVAHPQLIDS 171

Query: 110 SAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAA 164
            A + +Q +  G YH+  ++ S     +  G+   G+LGHG   +      R+  P    
Sbjct: 172 LASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTP-KRVGGPLEGV 230

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            V  V+    H   V  +GQ+F+ GD +    GH D  +    PR VE+LKG+   +   
Sbjct: 231 RVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGD-RKSASMPREVESLKGLKTLRAAC 289

Query: 225 GLNFTGFL------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           G   T  +            ++ G + T G     +LGHGD   +  P  +A L +  + 
Sbjct: 290 GPWHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVD-HNF 348

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            Q+A G S  +A+T  G +Y+ GS S   LG  +    L P  ++  R     +  VS G
Sbjct: 349 RQVACGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGRL-PGVLRLGR---TLIEEVSCG 404

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
             HV AL S G V TWGKG  G LGHGD  D+ +P  + +L+     +V
Sbjct: 405 AYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKV 453



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 115/252 (45%), Gaps = 22/252 (8%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 163
           +  G +HT+L+ S   +FS G    GVLGHG       P   + +   +    +      
Sbjct: 235 VACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHT 294

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A VV+V +  ++A   L SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 295 AAVVEVMSRYSNAGSSL-SGKLFTWGDGDKNRLGHGDKEQKLV-PTCVAALVDHNFRQVA 352

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSY 281
            G + T  LT  GH++T GS ++GQLG      R     +  +  +G  +  +++ G  +
Sbjct: 353 CGHSLTVALTTTGHLYTMGSVSYGQLGDPQATGR-----LPGVLRLGRTLIEEVSCGAYH 407

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           + A+T  G V ++G G+N  LGHG+  D   P  ++  R K +  V   +     + L  
Sbjct: 408 VAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAICLHK 467

Query: 342 SGYVYTWGKGYC 353
           SG     G   C
Sbjct: 468 SGPGVGTGNSMC 479



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 8/172 (4%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D   PRA+++     + V +++ G  H   +   G V++WG+   G LGHG + D   P+
Sbjct: 110 DAFLPRAVRSLVV--LDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQ 167

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRP-RIL 425
            + SL S     V   +  +  +  +G +Y  G G   FG LG    G S     P R+ 
Sbjct: 168 LIDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGH---GNSISHWTPKRVG 224

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             L    VS ++ G +HTV+VT  G+LF FGD     LGH   +    P E+
Sbjct: 225 GPLEGVRVSSVACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREV 276


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 157/318 (49%), Gaps = 18/318 (5%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQM-QITTGRYHTLLISNS-SVFSCGSSLC 140
           L   +  WK V R   S+          AG  +  +T G YHT  +S+  ++F+ G  + 
Sbjct: 39  LGHGDNGWKYVPRLTHSL----------AGQVITHVTCGSYHTAAVSSKGNLFTWGGGMY 88

Query: 141 GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 200
           G LGHG E+       R++      VV ++    H A V   G ++T GD  +   GH D
Sbjct: 89  GKLGHGNESGHSTP-KRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGD 147

Query: 201 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           T    + P+L+E L G    Q++A    TG LT  G V+T G    G+LGHG   +  +P
Sbjct: 148 TEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSP 207

Query: 261 KSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           + +  L  +G   VQI+ G  +   VT +G +Y+FG G +  LGHG++ ++++P  ++  
Sbjct: 208 RLVETL--LGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDL 265

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
              G+ + +++ G  H VAL SS  VYTWG G  G LGHG     + P+ +  L     V
Sbjct: 266 --DGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVV 323

Query: 380 QVCARKRKTFVLVDTGSV 397
            V +    T  LV+  SV
Sbjct: 324 CVASYNEHTACLVEPHSV 341



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 143/284 (50%), Gaps = 8/284 (2%)

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           G V+T G       GH D N   + PRL  +L G     VT G   T  ++ +G++ T G
Sbjct: 26  GGVYTWGRGDDGRLGHGD-NGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWG 84

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
              +G+LGHG+     TPK +  L  + +VV IA G  +   VT  G +Y++G   N   
Sbjct: 85  GGMYGKLGHGNESGHSTPKRVDSLVGL-AVVDIACGSRHTAIVTSRGCLYTWGDKENGVA 143

Query: 303 GHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           GHG+ +  +  P+ ++  R  G  VV++SA   H   L  +G VYTWG+G  G LGHG E
Sbjct: 144 GHGDTEGHQYTPKLLE--RLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAE 201

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
            +   P  + +L     VQ+      + V+   G +Y FG    G LG  D+   +KV +
Sbjct: 202 RNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDK--VNKV-K 258

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           P ++  L    ++QI+ G  H+V +T    ++ +G+ +  +LGH
Sbjct: 259 PTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGH 302



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 118/244 (48%), Gaps = 9/244 (3%)

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSF 294
           G V+T G    G+LGHGD   +  P+    L   G V+  +  G  +  AV+  G ++++
Sbjct: 26  GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSL--AGQVITHVTCGSYHTAAVSSKGNLFTW 83

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LGHG +     P+ + +    G+ VV ++ G  H   + S G +YTWG    G
Sbjct: 84  GGGMYGKLGHGNESGHSTPKRVDSL--VGLAVVDIACGSRHTAIVTSRGCLYTWGDKENG 141

Query: 355 ALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
             GHGD E  +  P+ L  L     VQ+ A    T  L D G VY +G   FG LG    
Sbjct: 142 VAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLG---H 198

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G       PR++++L      QIS G +H+ VVT  G+++ FG  E  QLGH      ++
Sbjct: 199 GAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVK 258

Query: 474 PTEI 477
           PT +
Sbjct: 259 PTLV 262



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 4/189 (2%)

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T  G VY++G G +  LGHG+   +  PR   +    G  +  V+ G  H  A+ S G +
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSL--AGQVITHVTCGSYHTAAVSSKGNL 80

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           +TWG G  G LGHG+E   + P+ + SL     V +    R T ++   G +Y +G    
Sbjct: 81  FTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKEN 140

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G  G  D         P++L+ L    V Q+S   +HT  +TD G ++ +G+ +  +LGH
Sbjct: 141 GVAGHGD--TEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGH 198

Query: 466 DTLRGCLEP 474
              R C  P
Sbjct: 199 GAERNCHSP 207


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 274
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 335 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 443 TVVVTDRGRLFGFGDNERAQLGH 465
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I +     I +V  + 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELV--AC 370

Query: 332 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 385
           G+ H  A+  SG +YTWG G    G LGHG+++   +P+    PL  +  H++   C   
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI--HVSSISCG-P 427

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 428 WHTALVTSAGQLFTFGDGSFGVLGHGDRA---SLSVPREVESLKGLRTVRAACGVWHTAA 484

Query: 446 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           V +             G++F +GD ++ +LGH        PT
Sbjct: 485 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT 526



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 142/344 (41%), Gaps = 27/344 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSASENHAA 177
           GR+  L+     ++S G    G LGHG     C         S AH  +  V+  E H  
Sbjct: 320 GRHAALVTKQGEIYSWGEESGGRLGHG---VDCDVAQPKLIDSLAHMNIELVACGEYHTC 376

Query: 178 FVLQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            V  SG ++T GD +  F   GH +        R+   L+G+    ++ G   T  +T  
Sbjct: 377 AVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSA 436

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--------- 286
           G + T G  + G LGHGD      P+ +  L+ +   V+ A G  +  AV          
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGL-RTVRAACGVWHTAAVVEVMVGNSSS 495

Query: 287 ---GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
               +G ++++G G    LGHG++     P  +        +  +V+ G    VAL +SG
Sbjct: 496 SNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP--NFCQVACGHCLTVALTTSG 553

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           +VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY +G 
Sbjct: 554 HVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              G LG    G +D    P ++++L+   V  +  G+  T  +
Sbjct: 613 GANGRLG---HGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI 653



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 278
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 367 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 423
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 274
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 335 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 443 TVVVTDRGRLFGFGDNERAQLGH 465
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I +     I +V  + 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELV--AC 370

Query: 332 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 385
           G+ H  A+  SG +YTWG G    G LGHG+++   +P+    PL  +  H++   C   
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI--HVSSISCG-P 427

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 428 WHTALVTSAGQLFTFGDGSFGVLGHGDRA---SLSVPREVESLKGLRTVRAACGVWHTAA 484

Query: 446 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           V +             G++F +GD ++ +LGH        PT
Sbjct: 485 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT 526



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 142/344 (41%), Gaps = 27/344 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSASENHAA 177
           GR+  L+     ++S G    G LGHG     C         S AH  +  V+  E H  
Sbjct: 320 GRHAALVTKQGEIYSWGEESGGRLGHG---VDCDVAQPKLIDSLAHMNIELVACGEYHTC 376

Query: 178 FVLQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            V  SG ++T GD +  F   GH +        R+   L+G+    ++ G   T  +T  
Sbjct: 377 AVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSA 436

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--------- 286
           G + T G  + G LGHGD      P+ +  L+ +   V+ A G  +  AV          
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGL-RTVRAACGVWHTAAVVEVMVGNSSS 495

Query: 287 ---GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
               +G ++++G G    LGHG++     P  +        +  +V+ G    VAL +SG
Sbjct: 496 SNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP--NFCQVACGHCLTVALTTSG 553

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           +VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY +G 
Sbjct: 554 HVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              G LG    G +D    P ++++L+   V  +  G+  T  +
Sbjct: 613 GANGRLG---HGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI 653



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 278
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 367 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 423
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 22/329 (6%)

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
           C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+
Sbjct: 337 CLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVSQPKLI 395

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEE 268
           +AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE 
Sbjct: 396 DALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEG 455

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
           +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR
Sbjct: 456 I-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESL--KGLRTVR 512

Query: 329 VSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
            + G  H  A+             SSG ++TWG G  G LGHGD+  K +P  +++L   
Sbjct: 513 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEP 572

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
              QV      T  L  +G VY  G   +G LG      +D +L  R+   L  + V +I
Sbjct: 573 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG---NAQADGMLPVRVEGKLHKNFVEEI 629

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           S G YH  V+T +  ++ +G     +LGH
Sbjct: 630 SCGAYHVAVLTSKTEVYTWGKGANGRLGH 658



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 132/283 (46%), Gaps = 22/283 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 406 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVP-KHVNGPLEGIHVSSISCG 464

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 465 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 523

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 524 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEP-NFCQVACGHC 582

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 583 LTVALTTSGHVYTMGSAVYGQLGNA-QADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 640

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 382
           S   VYTWGKG  G LGHGD  DK  P  + +LK   + + VC
Sbjct: 641 SKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVC 683



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 26/222 (11%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 351 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELV--AC 408

Query: 332 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 385
           G+ H  A+  SG +YTWG G    G LGHG++I   +P+    PL  +  H++   C   
Sbjct: 409 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLEGI--HVSSISCG-P 465

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T V+   G ++ FG   FG LG  DR   + +  PR ++SL+     + + G++HT  
Sbjct: 466 WHTAVVTSAGQLFTFGDGSFGVLGHGDR---ESISVPREVESLKGLRTVRAACGVWHTAA 522

Query: 446 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 523 VVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPT 564



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D + 
Sbjct: 334 KMDCLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQ 391

Query: 367 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 423
           P+ + +L SH+ +++ A  +  T  +  +G +Y  G G   FG LG  +  +S  V +  
Sbjct: 392 PKLIDAL-SHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DISHWVPK-H 448

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   L   HVS IS G +HT VVT  G+LF FGD     LGH        P E+
Sbjct: 449 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREV 502



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 10/177 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE  AGN              S+  +F+ G    G LGHG +  +
Sbjct: 509 RTVRAACGVWHTAAVVEVMAGNSSSSNC--------SSGKIFTWGDGDKGRLGHGDKGPK 560

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T +      +  QV+        +  SG V+T G       G+   +  +   R+ 
Sbjct: 561 LVP-TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADG-MLPVRVE 618

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
             L     ++++ G      LT +  V+T G   +G+LGHGDT D+ TP  +  L++
Sbjct: 619 GKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKD 675



 Score = 42.4 bits (98), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 9/130 (6%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQ 168
           N  Q+  G   T+ ++ S  V++ GS++ G LG+     Q      +      H   V +
Sbjct: 573 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNA----QADGMLPVRVEGKLHKNFVEE 628

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           +S    H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NF
Sbjct: 629 ISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDK-NTPTLVEALKDKQVRIVVCGINF 687

Query: 229 TGFLTIRGHV 238
           T  + I   V
Sbjct: 688 TAAICIHKWV 697


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 154/316 (48%), Gaps = 9/316 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3984 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMVPTLLESIQHVFVKK 4042

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 278
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4043 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDIACG 4100

Query: 279  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
              +  A+T  G +Y++G G    LGHG+  D+L P+ I+  +   +  V   +GD   + 
Sbjct: 4101 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLC 4160

Query: 339  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +     V++WG G  G LG G      +P  + SL     V+V    + +  L  +G++Y
Sbjct: 4161 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIY 4220

Query: 399  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4221 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4277

Query: 459  ERAQLGHDTLRGCLEP 474
            +  QLG  T      P
Sbjct: 4278 DEGQLGDGTTSALQRP 4293



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 205  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 2955 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIP 3014

Query: 265  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             L + V   V + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K 
Sbjct: 3015 FLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKR 3074

Query: 324  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 382
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   ++ P+ + SL     +Q+  
Sbjct: 3075 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIAC 3132

Query: 383  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
             +R  +T  L   G VY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 3133 GSRDAQTMALTADGLVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3189

Query: 442  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3190 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3223



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 189
            +++CG    G LG G ++  C     I F S   + +VS      HA  + Q G+VF+ G
Sbjct: 2988 LYACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWG 3046

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 3047 EGEDGKLGHGNSIS-LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3105

Query: 250  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            GHGDT  +  PK +  L  VG  ++QIA G   +  +A+T +G+VYS+G G    LG G 
Sbjct: 3106 GHGDTATQSKPKLVQSL--VGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG 3163

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3164 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3221

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P  +  L+    + V         + D G VY +G    G  G    G +    +P ++ 
Sbjct: 3222 PTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQG---NGTTIVNKKPSLVH 3278

Query: 427  SLRAHHVSQISTGLYHTV--VVTDR 449
             L    V+++S G  H++  V+TD+
Sbjct: 3279 ELDDARVNRVSCGSSHSIAWVLTDQ 3303



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 161/342 (47%), Gaps = 17/342 (4%)

Query: 110  SAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-- 166
            SA   +Q+T G      ++ +  V++ G    G LG G   +  V        S  HV  
Sbjct: 3984 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTL---LESIQHVFV 4040

Query: 167  --VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVT 223
              V V++   H   +   G V++ G+      GH   NR  + RP+L+E L G     + 
Sbjct: 4041 KKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDIA 4098

Query: 224  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 282
             G + +  +T  G ++T G   +G+LGHGD+ D+ TPK I  L++   + V   +G +  
Sbjct: 4099 CGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQT 4158

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            L VT +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  S
Sbjct: 4159 LCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVVKVECGSQFSVALTRS 4216

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            G +YTWGKG    LGHG +     P  +++L+    + +           D G V+ +G 
Sbjct: 4217 GAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGD 4276

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               G LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4277 NDEGQLG---DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4315



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 13/320 (4%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            ++I  P  + V      V ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 2953 SKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3011

Query: 210  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
             +  L     K+V+  +G      LT  G V + G    G+LGHG+++    P+ I  L+
Sbjct: 3012 PIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLK 3071

Query: 268  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
                +  IA G  +  A+T +G +Y++G G    LGHG+   + +P+ +Q+   + I  +
Sbjct: 3072 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQI 3130

Query: 328  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
               + D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    + 
Sbjct: 3131 ACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF 3190

Query: 388  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            +  L   G V+ +G   +  LG    G    V +P +++ LR   V  ++ G  H + VT
Sbjct: 3191 SLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVT 3247

Query: 448  DRGRLFGFGDNERAQLGHDT 467
            D G+++ +GDN+  Q G+ T
Sbjct: 3248 DIGQVYAWGDNDHGQQGNGT 3267



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3953 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 4008

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4009 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4068

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG   
Sbjct: 4069 DGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLG--- 4125

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4126 HGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4185

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4186 CKIPMKI 4192



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 114/244 (46%), Gaps = 10/244 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            V+  G N   QLG   G  +  P    +  L ++  V  IA G   +  V+  G +Y+ G
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPV-HIAGGSKTLFVVSQEGKLYACG 2992

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2993 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDGK 3052

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+ I    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 3053 LGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 3112

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
              K   P+++ SL    + QI+ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 3113 QSK---PKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYT 3169

Query: 474  PTEI 477
            P  I
Sbjct: 3170 PLLI 3173



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 118/253 (46%), Gaps = 13/253 (5%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 176
            G++   L  +  VFS G    G LGHG      +S  +   I    +  +  ++    H+
Sbjct: 3030 GKHALALTQDGKVFSWGEGEDGKLGHG----NSISLDKPRLIESLKSKRIRDIACGSGHS 3085

Query: 177  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 234
            A +  SG+++T G       GH DT     +P+LV++L G    Q+  G     T  LT 
Sbjct: 3086 AAITSSGELYTWGLGEYGRLGHGDTATQ-SKPKLVQSLVGQRIIQIACGSRDAQTMALTA 3144

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3145 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3203

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G  F LGHG  H   +P  ++  R  G  V+ V+ G  H +A+   G VY WG    G
Sbjct: 3204 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDIGQVYAWGDNDHG 3261

Query: 355  ALGHGDEIDKTLP 367
              G+G  I    P
Sbjct: 3262 QQGNGTTIVNKKP 3274



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 9/267 (3%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLT 233
           H   + Q   V++ G+      GH D  R  +  P+L+EAL       +  G  ++  L+
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGD--RAWYDEPKLIEALVEKNITFIACGSTYSAALS 573

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVY 292
             G ++T G   +G+LGHG++ +   P  +  L   +   V   +G S  L VT +G+V+
Sbjct: 574 SNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVF 633

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           S+G G+   LG G       P+ +       I+V +V  G +   AL + G VYTWGKG 
Sbjct: 634 SWGDGNYGKLGRGGCDGSKTPKIVDKLL--DINVAKVYCGGQFSAALTAYGEVYTWGKGE 691

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
              LGHG+E     P+ +  LK+    ++C        L +   +YG+G   +G +   D
Sbjct: 692 AYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQI---D 748

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTG 439
             +   V  P +  +L   +V  ++ G
Sbjct: 749 PALGTVVPEPTLCPTLSGKNVIGLACG 775



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 4/232 (1%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT    V++ G+   G+LGHGD      PK I  L E  ++  IA G +Y  A++ NG +
Sbjct: 520 LTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVE-KNITFIACGSTYSAALSSNGEL 578

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y++G G+   LGHG   + + P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 579 YTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 638

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 639 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG-- 696

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G  D V  P+I+D L+   V ++  G  H + +T+   ++G+G N+  Q+
Sbjct: 697 -HGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQI 747



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 7/188 (3%)

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           ++ LA+T +  VYS+G+G    LGHG++    +P+ I+    K I    ++ G  +  AL
Sbjct: 515 THYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITF--IACGSTYSAAL 572

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSV 397
            S+G +YTWG+G  G LGHG+  +  +P  +++L  H+ V V   +   +T  +  +G V
Sbjct: 573 SSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIV 632

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           + +G   +G LG   RG  D    P+I+D L   +V+++  G   +  +T  G ++ +G 
Sbjct: 633 FSWGDGNYGKLG---RGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGK 689

Query: 458 NERAQLGH 465
            E  +LGH
Sbjct: 690 GEAYRLGH 697



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 29/264 (10%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L  ++SV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 512 SDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITF--------IA 563

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVTAG 225
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V C    +G
Sbjct: 564 CGSTYSAALSSNGELYTWGRGNYGRLGHGNSDN-VMIPTLVTALNGHMVVYVACG---SG 619

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            + T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+
Sbjct: 620 DSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAAL 678

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T  G VY++G G  + LGHG +     P+ I   + K   V  +  G+ HV+AL     +
Sbjct: 679 TAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTK--KVKELCVGNLHVLALTEDQLI 736

Query: 346 YTWGKGYCGALGHGDEIDKTLPEP 369
           Y WG+   G +     +   +PEP
Sbjct: 737 YGWGRNDYGQIDPA--LGTVVPEP 758



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 17/195 (8%)

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           +L+V GN  +  +GS + +            P+ +  F  K I ++   +   H +AL  
Sbjct: 475 ILSVNGNVYMMYYGSETQY------------PQRVYGFSEKPIIMIASHSDGTHYLALTQ 522

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
              VY+WG G  G LGHGD      P+ + +L       +      +  L   G +Y +G
Sbjct: 523 DNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWG 582

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
              +G LG    G SD V+ P ++ +L  H V  ++  +G   T+ VT  G +F +GD  
Sbjct: 583 RGNYGRLG---HGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGN 639

Query: 460 RAQLGHDTLRGCLEP 474
             +LG     G   P
Sbjct: 640 YGKLGRGGCDGSKTP 654


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 274
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 335 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 443 TVVVTDRGRLFGFGDNERAQLGH 465
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I +     I +V  + 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELV--AC 370

Query: 332 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 385
           G+ H  A+  SG +YTWG G    G LGHG+++   +P+    PL  +  H++   C   
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI--HVSSISCG-P 427

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 428 WHTALVTSAGQLFTFGDGSFGVLGHGDRA---SLSVPREVESLKGLRTVRAACGVWHTAA 484

Query: 446 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           V +             G++F +GD ++ +LGH        PT
Sbjct: 485 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT 526



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 142/344 (41%), Gaps = 27/344 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSASENHAA 177
           GR+  L+     ++S G    G LGHG     C         S AH  +  V+  E H  
Sbjct: 320 GRHAALVTKQGEIYSWGEESGGRLGHG---VDCDVAQPKLIDSLAHMNIELVACGEYHTC 376

Query: 178 FVLQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            V  SG ++T GD +  F   GH +        R+   L+G+    ++ G   T  +T  
Sbjct: 377 AVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSA 436

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--------- 286
           G + T G  + G LGHGD      P+ +  L+ +   V+ A G  +  AV          
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGL-RTVRAACGVWHTAAVVEVMVGNSSS 495

Query: 287 ---GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
               +G ++++G G    LGHG++     P  +        +  +V+ G    VAL +SG
Sbjct: 496 SNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP--NFCQVACGHCLTVALTTSG 553

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           +VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY +G 
Sbjct: 554 HVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              G LG    G +D    P ++++L+   V  +  G+  T  +
Sbjct: 613 GANGRLG---HGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI 653



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 278
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 367 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 423
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 154/316 (48%), Gaps = 24/316 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V+    HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACG 369

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
                 +T+ G ++T G  TH  G LGHG+ +    PK +  PLEEV  V  IA GP + 
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEV-RVASIACGPWHT 428

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT  G +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+   
Sbjct: 429 AVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESL--KGLRTVRAACGVWHTAAVVEV 486

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G  G LGHGD+  + +P  +++L  H   +V      T  
Sbjct: 487 MVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVA 546

Query: 391 LVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
           L   G V+  G   FG LG P   G    ++  R++D+    +V  I+ G +H   VT +
Sbjct: 547 LTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDA----YVEDIACGAHHVACVTLK 602

Query: 450 GRLFGFGDNERAQLGH 465
             ++ +G     +LGH
Sbjct: 603 SEVYTWGKGANGRLGH 618



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 133/286 (46%), Gaps = 22/286 (7%)

Query: 106 IVETSAGNQMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE  A +  ++   G YH   ++ S     +  G+   G+LGHG + +  +   R+N P
Sbjct: 354 LVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIP-KRVNGP 412

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V  ++    H A V  +GQ+FT GD +    GH D  +  + PR VE+LKG+   
Sbjct: 413 LEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHND-RQSAYSPREVESLKGLRTV 471

Query: 221 QVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
           +   G+  T  +               G + T G    G+LGHGD   R  P  +A L +
Sbjct: 472 RAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVD 531

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
             +  ++A G S  +A+T  G V++ GS     LG   Q D   P  ++  R    +V  
Sbjct: 532 -HNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVED 588

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           ++ G  HV  +     VYTWGKG  G LGHGD+ D+  P  + +LK
Sbjct: 589 IACGAHHVACVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALK 634



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 21/237 (8%)

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 313
            LD P PK++     V  V  +A G  +   VT  G V+++G  S   LGHG   D   P
Sbjct: 294 NLDAPLPKALESAI-VLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHP 352

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLS 371
           + ++        VV  + G+ H  A+  SG +YTWG G    G LGHG++I   +P+ ++
Sbjct: 353 QLVEALASSTTEVV--ACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVN 410

Query: 372 -SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
             L+      +      T V+   G ++ FG   FG LG  DR        PR ++SL+ 
Sbjct: 411 GPLEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDR---QSAYSPREVESLKG 467

Query: 431 HHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
               + + G++HT  V +             G+LF +GD ++ +LGH      L PT
Sbjct: 468 LRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPT 524



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 19/279 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + V  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 325
              + V +A G  +  AVT +G +Y++G G++    LGHG       P+ +     + + 
Sbjct: 360 SSTTEV-VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEE-VR 417

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK    V+     
Sbjct: 418 VASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGV 477

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   ++ L P  + +L  H+ 
Sbjct: 478 WHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDK---EQRLVPTCVAALVDHNF 534

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            +++ G   TV +T +G +F  G +   QLG     G L
Sbjct: 535 RKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKL 573



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  V+ G +H   +   G V+TWG+   G LGHG + D + P+ + +L S     V  
Sbjct: 309 LDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVAC 368

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 442
            +     +  +G +Y +G  G  SLG    G       P R+   L    V+ I+ G +H
Sbjct: 369 GEYHGCAVTLSGDLYTWG-DGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWH 427

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T VVT  G+LF FGD     LGH+  +    P E+
Sbjct: 428 TAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREV 462


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 159/323 (49%), Gaps = 22/323 (6%)

Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
           + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+++L  +
Sbjct: 305 LEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVAQPKLIDSLAHM 363

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQ 274
             + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE +  V  
Sbjct: 364 NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI-HVSS 422

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR + G  
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESL--KGLRTVRAACGVW 480

Query: 335 HVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           H  A+             SSG ++TWG G  G LGHGD+  + +P  +++L      QV 
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVA 540

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                T  L  +G VY  G   +G LG P    +D +L  R+   L  + V +IS G YH
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGNPQ---ADGLLPVRVEGKLHKNFVEEISCGAYH 597

Query: 443 TVVVTDRGRLFGFGDNERAQLGH 465
             V+T R  ++ +G     +LGH
Sbjct: 598 VAVLTSRTEVYTWGKGANGRLGH 620



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R++ P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KRVDGPLEGIHVSSISCG 426

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RASLSVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP-NFCQVACGHC 544

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D L P  ++    K   V  +S G  HV  L 
Sbjct: 545 LTVALTTSGHVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHG   DK  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALK 636



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E    +  + ++ G      +T +G +++ G  + G+LGHG   D   PK I  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
            + ++  +A G  +  AVT +G +Y++G G+  F  LGHG       P+ +     +GIH
Sbjct: 362 HM-NIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDG-PLEGIH 419

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 420 VSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGV 479

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   D    P  + +L   + 
Sbjct: 480 WHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDK---DSRFVPTCVAALVEPNF 536

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            Q++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLL 575



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 26/222 (11%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I +     I +V  + 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELV--AC 370

Query: 332 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 385
           G+ H  A+  SG +YTWG G    G LGHG+++   +P+    PL  +  H++   C   
Sbjct: 371 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGI--HVSSISCG-P 427

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T ++   G ++ FG   FG LG  DR     +  PR ++SL+     + + G++HT  
Sbjct: 428 WHTALVTSAGQLFTFGDGSFGVLGHGDRA---SLSVPREVESLKGLRTVRAACGVWHTAA 484

Query: 446 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           V +             G++F +GD ++ +LGH        PT
Sbjct: 485 VVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPT 526



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 142/344 (41%), Gaps = 27/344 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSASENHAA 177
           GR+  L+     ++S G    G LGHG     C         S AH  +  V+  E H  
Sbjct: 320 GRHAALVTKQGEIYSWGEESGGRLGHG---VDCDVAQPKLIDSLAHMNIELVACGEYHTC 376

Query: 178 FVLQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            V  SG ++T GD +  F   GH +        R+   L+G+    ++ G   T  +T  
Sbjct: 377 AVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSA 436

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT--------- 286
           G + T G  + G LGHGD      P+ +  L+ +   V+ A G  +  AV          
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGL-RTVRAACGVWHTAAVVEVMVGNSSS 495

Query: 287 ---GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
               +G ++++G G    LGHG++     P  +        +  +V+ G    VAL +SG
Sbjct: 496 SNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP--NFCQVACGHCLTVALTTSG 553

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           +VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY +G 
Sbjct: 554 HVYTMGSAVYGQLGN-PQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGK 612

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              G LG    G +D    P ++++L+   V  +  G+  T  +
Sbjct: 613 GANGRLG---HGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAI 653



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 26/229 (11%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G +HT L++++  +F+ G    GVLGHG   +  V    +        V+ +    H
Sbjct: 423 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVP-REVESLKGLRTVRAACGVWH 481

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH D +   F P  V AL      QV 
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDS-RFVPTCVAALVEPNFCQVA 540

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAG 278
            G   T  LT  GHV+T GS  +GQLG+      P    + P+   G      V +I+ G
Sbjct: 541 CGHCLTVALTTSGHVYTMGSAVYGQLGN------PQADGLLPVRVEGKLHKNFVEEISCG 594

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             ++  +T    VY++G G+N  LGHG   D+  P  ++  + K +  V
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSV 643



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D   
Sbjct: 296 KMDYLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQ 353

Query: 367 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 423
           P+ + SL +H+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V + R
Sbjct: 354 PKLIDSL-AHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-R 410

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 411 VDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREV 464


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 155/316 (49%), Gaps = 9/316 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA   VQ++  E     V   G+V+  G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4290 SALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDS-VMVPTLLESIQHVFVKK 4348

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 278
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4349 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEEL--LGTEIVDIACG 4406

Query: 279  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4407 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4466

Query: 339  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +G++Y
Sbjct: 4467 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4526

Query: 399  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4527 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4583

Query: 459  ERAQLGHDTLRGCLEP 474
            +  QLG  T      P
Sbjct: 4584 DEGQLGDGTTSALQRP 4599



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 205  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 3275 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIP 3334

Query: 265  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             L + +   V + +G  + LA+T +G ++S+G G +  LGHG      +PR I++ + K 
Sbjct: 3335 FLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3394

Query: 324  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 382
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +QV  
Sbjct: 3395 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVAC 3452

Query: 383  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
             +R  +T  L   GSVY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 3453 GSRDAQTMALTADGSVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3509

Query: 442  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3510 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3543



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 189
            +++CG    G LG G ++  C     I F S   + +V+      HA  + Q G++F+ G
Sbjct: 3308 LYACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWG 3366

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 3367 EGEDGKLGHGNS-VSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3425

Query: 250  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            GHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3426 GHGDTATQMKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3483

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3484 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3541

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P  +  L+    V V         + DTG VY +G    G  G     V+ K   P ++ 
Sbjct: 3542 PTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKK---PSLVH 3598

Query: 427  SLRAHHVSQISTGLYHTV--VVTDR 449
             L    V+++S G  H++  V+TD+
Sbjct: 3599 ELDDARVNRVSCGSSHSIAWVLTDQ 3623



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 163/342 (47%), Gaps = 17/342 (4%)

Query: 110  SAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-- 166
            SA   +Q+T G    L ++ +  V++ G    G LG G   +  V        S  HV  
Sbjct: 4290 SALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTL---LESIQHVFV 4346

Query: 167  --VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVT 223
              V V++   H   +   G V++ G+      GH   NR ++ RP+L+E L G     + 
Sbjct: 4347 KKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKLIEELLGTEIVDIA 4404

Query: 224  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 282
             G + +  +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   + V   +G +  
Sbjct: 4405 CGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQT 4464

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            L VT +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  S
Sbjct: 4465 LCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRS 4522

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            G +YTWGKG    LGHG +     P  +++L+    + +           D G V+ +G 
Sbjct: 4523 GAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGD 4582

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               G LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4583 NDEGQLG---DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4621



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 17/320 (5%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 3273 SKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3331

Query: 210  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
            L+  L     K+V   +G      LT  G + + G    G+LGHG+++    P+ I  L+
Sbjct: 3332 LIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLK 3391

Query: 268  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
                +  IA G  +  A+T +G +Y++G G    LGHG+   +++P+ +Q+    G  V+
Sbjct: 3392 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSL--VGQRVI 3448

Query: 328  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    
Sbjct: 3449 QVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGA 3508

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   V  ++ G  H + 
Sbjct: 3509 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLA 3565

Query: 446  VTDRGRLFGFGDNERAQLGH 465
            VTD G+++ +GDN+  Q G+
Sbjct: 3566 VTDTGQVYAWGDNDHGQQGN 3585



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 13/253 (5%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 176
            G++   L  +  +FS G    G LGHG      VS  +   I    +  +  ++    H+
Sbjct: 3350 GKHALALTQDGKIFSWGEGEDGKLGHG----NSVSLDKPRLIESLKSKRIRDIACGSGHS 3405

Query: 177  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 234
            A +  SG+++T G       GH DT   + +P+LV++L G    QV  G     T  LT 
Sbjct: 3406 AAITSSGELYTWGLGEYGRLGHGDTATQM-KPKLVQSLVGQRVIQVACGSRDAQTMALTA 3464

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3465 DGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3523

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY WG    G
Sbjct: 3524 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQVYAWGDNDHG 3581

Query: 355  ALGHGDEIDKTLP 367
              G+G  I    P
Sbjct: 3582 QQGNGSTIVNKKP 3594



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   +LAVT +G VY
Sbjct: 4259 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLLAVTADGKVY 4314

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4315 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4374

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4375 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4434

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4435 ---SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4491

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4492 CKIPMKI 4498



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 115/244 (47%), Gaps = 10/244 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 3312

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G +++WG+G  G 
Sbjct: 3313 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGK 3372

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+ +    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 3373 LGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 3432

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                ++P+++ SL    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 3433 Q---MKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT 3489

Query: 474  PTEI 477
            P  I
Sbjct: 3490 PLLI 3493



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 6/243 (2%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT    V++ G+   G+LGHGD +    PK +  L +  ++  IA G +Y   ++ NG +
Sbjct: 512 LTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVD-KNITFIACGSTYSAVLSSNGEL 570

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y++G G+   LGHG   + L P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 571 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDG 630

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 631 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLG-- 688

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
             G  + +  P++++ L+   V ++  G +H + +T+   ++G+G N+  Q+  D   G 
Sbjct: 689 -HGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQI--DPALGT 745

Query: 472 LEP 474
           + P
Sbjct: 746 IVP 748



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 29/264 (10%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 504 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF--------IA 555

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVTAG 225
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V C    +G
Sbjct: 556 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDN-VLIPTLVTALNGHMVVYVACG---SG 611

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            + T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+
Sbjct: 612 DSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAAL 670

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T  G VY++G G  + LGHG +     P+ I+  + K   V  +  G+ HV+AL     V
Sbjct: 671 TAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPK--KVKELCVGNFHVLALTEDQLV 728

Query: 346 YTWGKGYCGALGHGDEIDKTLPEP 369
           Y WG+   G +     +   +PEP
Sbjct: 729 YGWGRNDYGQIDPA--LGTIVPEP 750


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 157/327 (48%), Gaps = 29/327 (8%)

Query: 160 FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 213
           FP A     V   +N      HAA V + G++F+ G+ S    GH   +  +  P+L++A
Sbjct: 322 FPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPKLIDA 380

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSI-APLEEVG 270
           L     + V  G   T  +T+ G ++T G+    +G LGHG+ +    PK +  PLE + 
Sbjct: 381 LSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGI- 439

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
            V  I+ GP +   VT  G +++FG G+   LGHG++     PR +++   KG+  +R S
Sbjct: 440 HVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTMRAS 497

Query: 331 AGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
            G  H  A+             SSG ++TWG G  G LGHGD+  K +P  ++ L  H  
Sbjct: 498 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA-LVEHNF 556

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
            QV      T  L  +G VY  G   +G LG P    +D  L  R+   L    V +I+ 
Sbjct: 557 CQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQ---ADGKLPTRVEGKLLKSFVEEIAC 613

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G YH  V+T R  ++ +G     +LGH
Sbjct: 614 GAYHVAVLTLRNEVYTWGKGANGRLGH 640



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 137/300 (45%), Gaps = 23/300 (7%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 156
           V H   I   S  N   +  G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 372 VLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVP-K 430

Query: 157 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + +  PR VE+LK
Sbjct: 431 RVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLK 489

Query: 216 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           G+   + + G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 490 GLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 549

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           A +E   +  Q+A G S  +A+T +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 550 ALVEH--NFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKS- 606

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 382
             V  ++ G  HV  L     VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 607 -FVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIAC 665



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 27/250 (10%)

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G G  +D   PK++     V  V  IA G  +   VT  G ++S+G  S   LGHG   D
Sbjct: 313 GLGVKIDSLFPKALESAV-VLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSD 371

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 367
            L P+ I       I +V  + G+ H  A+  SG +YTWG G    G LGHG+++   +P
Sbjct: 372 VLHPKLIDALSNTNIELV--ACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVP 429

Query: 368 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
           +    PL  +  H++   C     T V+   G ++ FG   FG+LG  DR     V  PR
Sbjct: 430 KRVNGPLEGI--HVSYISCG-PWHTAVVTSAGQLFTFGDGTFGALGHGDR---KSVSLPR 483

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 471
            ++SL+     + S G++HT  V +             G+LF +GD ++ +LGH      
Sbjct: 484 EVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 543

Query: 472 LEPTEIFIQE 481
           L PT + + E
Sbjct: 544 LVPTCVALVE 553



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 28/296 (9%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 323 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALS 382

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT +G +Y++G+G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 383 NT-NIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 440

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK    ++     
Sbjct: 441 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGV 500

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L  H+ 
Sbjct: 501 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCV-ALVEHNF 556

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 482
            Q++ G   TV +T  G ++  G     QLG+    G L PT +       F++E+
Sbjct: 557 CQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKL-PTRVEGKLLKSFVEEI 611



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 21/237 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT +++++  +F+ G    G LGHG    + VS  R +        ++ S    
Sbjct: 444 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDR--KSVSLPREVESLKGLRTMRASCGVW 501

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D    +  P  V  ++   C QV
Sbjct: 502 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVALVEHNFC-QV 559

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G + T  LT  GHV+  GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 560 ACGHSLTVALTTSGHVYAMGSPVYGQLGNPQA-DGKLPTRVEGKLLKSFVEEIACGAYHV 618

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             +T    VY++G G+N  LGHG+  D   P  +   + K  HV  ++ G     A+
Sbjct: 619 AVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDK--HVKSIACGTNFTAAI 673



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 24/200 (12%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGHG +  +
Sbjct: 492 RTMRASCGVWHTAAVVE--------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 543

Query: 152 ----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 207
               CV+    NF       QV+   +    +  SG V+  G       G+   +  +  
Sbjct: 544 LVPTCVALVEHNF------CQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKL-- 595

Query: 208 PRLVEA--LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           P  VE   LK    +++  G      LT+R  V+T G   +G+LGHGDT DR  P  +  
Sbjct: 596 PTRVEGKLLKSF-VEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDA 654

Query: 266 LEEVGSVVQIAAGPSYMLAV 285
           L++   V  IA G ++  A+
Sbjct: 655 LKD-KHVKSIACGTNFTAAI 673


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 6/311 (1%)

Query: 159  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
             F  A  V Q++        V   G+VF CG++++   G    +  +  PR +E L    
Sbjct: 2449 EFIGALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFM 2508

Query: 219  CKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             ++V+  +G      LTI G + + G    G+LGHG+ ++   PK I   +    V  ++
Sbjct: 2509 VRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKS-SCVRDMS 2567

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G S+  A+  +G +Y++G G    LGHG+ +  L+P+ +Q+F    +  +   + D   
Sbjct: 2568 CGSSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQT 2627

Query: 337  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            +AL   G V++WG G  G LG G     ++P P+  L+     +V    + +  L  +G 
Sbjct: 2628 LALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGL 2687

Query: 397  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            V+ +G   +  LG    G    V +P+I+D LR   +  ++ G  H + VTD G++F +G
Sbjct: 2688 VWTWGKGDYYRLG---HGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWG 2744

Query: 457  DNERAQLGHDT 467
            DN+  Q G++T
Sbjct: 2745 DNDHGQQGNNT 2755



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 6/268 (2%)

Query: 209  RLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
            +++E+L+ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  L
Sbjct: 3431 KMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEAL 3490

Query: 267  EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
               G V+ I+ G S+   +T N  +Y++G G    LGHG+  D+L P+ ++  R   +  
Sbjct: 3491 RGKG-VIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVID 3549

Query: 327  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
            V   +GD   + L     V++WG G  G LG G      +P  + SL      +V    +
Sbjct: 3550 VACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQ 3609

Query: 387  KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
             +  L  +G+VY +G   +  LG    GV D V RP+ + +L+   V  I+TG  H V  
Sbjct: 3610 FSVALTRSGAVYTWGKGDYYRLG---HGVDDHVRRPKRVAALQGKKVITIATGSLHCVAS 3666

Query: 447  TDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            TD G ++ +GDN+  QLG  T      P
Sbjct: 3667 TDTGEVYTWGDNDEGQLGDGTTNAIARP 3694



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V +   HA  +   G V++ G+      GH + N    RPR++EAL+G     ++ G 
Sbjct: 3444 VAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNS-CDRPRVIEALRGKGVIDISCGG 3502

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
            + +  +T    ++T G   +G+LGHGD+ D+  PK +  L     V+ +A  +G +  L 
Sbjct: 3503 SHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRG-NRVIDVACGSGDAQTLC 3561

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  +++    G+ V +V  G +  VAL  SG 
Sbjct: 3562 LTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESL--IGLGVSKVECGSQFSVALTRSGA 3619

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P+ +++L+    + +           DTG VY +G   
Sbjct: 3620 VYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDND 3679

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   +S+++ G  HT+
Sbjct: 3680 EGQLG---DGTTNAIARPRLVTALQGKKISRVACGSAHTI 3716



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 129/255 (50%), Gaps = 9/255 (3%)

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
           T G +F   LT  G V++ GS   G+LGHGDT  R  P  +  L     V++I+ G ++ 
Sbjct: 24  TDGKHFLA-LTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAG-KQVIRISCGSTHS 81

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALD 340
            AVT  G +Y++G G+   LGHG   D+L P  +   R  G H++ V+  +GD H +A  
Sbjct: 82  AAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLR--GHHIIDVACGSGDAHTLAAA 139

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G V++WG G  G LG G       P+ +  L+     +V    + +  L   GSV+ +
Sbjct: 140 DDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTW 199

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G      LG    G  D V  P+++++L   HV  +S G  H + +TD G ++ +G N++
Sbjct: 200 GKGEGFRLG---HGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQ 256

Query: 461 AQLGHDTLRGCLEPT 475
            QLG    +   EPT
Sbjct: 257 GQLGDIDCQIRPEPT 271



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 155/334 (46%), Gaps = 12/334 (3%)

Query: 116  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE- 173
            QI  G      +S +  VF+CG S  G LG GP +       +I   S+  V +VS    
Sbjct: 2458 QIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSG 2517

Query: 174  -NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
              HA  +   G++F+ G+      GH +       P+L++  K    + ++ G + +  +
Sbjct: 2518 GRHAMALTIEGKLFSWGEGEDGKLGHGNRMN-CDHPKLIDTFKSSCVRDMSCGSSHSAAI 2576

Query: 233  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGV 290
               G ++T G   +G+LGHGD      PK +        V+ IA G   +  LA+T +G 
Sbjct: 2577 LSSGELYTWGLGEYGRLGHGDNYTHLKPKKVQSFTS-HRVIDIACGSRDAQTLALTDDGT 2635

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            V+S+G G    LG G       P  ++  + +G  V +V+ G +  +AL +SG V+TWGK
Sbjct: 2636 VWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQG--VCKVACGAQFSLALSTSGLVWTWGK 2693

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G    LGHG++     P+ +  L+    V V         + D+G V+ +G    G  G 
Sbjct: 2694 GDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGN 2753

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
                V+    RP++++ L    +++++ G  H++
Sbjct: 2754 NTTTVNR---RPQLVNGLEGQKITRVACGSSHSI 2784



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 135/288 (46%), Gaps = 20/288 (6%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           T G++   L     V+S GS   G LGHG +T+     T +   +   V+++S    H+A
Sbjct: 24  TDGKHFLALTREGEVYSWGSGDGGKLGHG-DTSPREEPTLVTGLAGKQVIRISCGSTHSA 82

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--R 235
            V   G+++T G  +    GH  +   +  P LV  L+G     V  G      L     
Sbjct: 83  AVTSEGELYTWGRGNYGRLGHGSSEDQLV-PVLVSGLRGHHIIDVACGSGDAHTLAAADD 141

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V + G   +G+LG G +     PKSI  L+ +G V ++  G  + LA+T +G V+++G
Sbjct: 142 GTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLG-VCKVYCGAQFSLALTRDGSVWTWG 200

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G  F LGHG +     P+ ++     G HVV VS G  H +AL  +G VY WG+   G 
Sbjct: 201 KGEGFRLGHGTEDHVRHPKLVEAL--DGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQ 258

Query: 356 LGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           LG   +ID +  PEP  +L S LA        K  V +  G    F W
Sbjct: 259 LG---DIDCQIRPEP--TLVSGLA-------SKGIVGIACGPAQSFAW 294



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 116/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            G++   L ++  V+S G    G LGHG   + C     I       V+ +S   +H+A +
Sbjct: 3450 GKHAMALSADGDVYSWGEGDDGKLGHGNRNS-CDRPRVIEALRGKGVIDISCGGSHSACI 3508

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 237
             Q+ +++T G       GH D+   +  P++VEAL+G     V   +G   T  LT    
Sbjct: 3509 TQNHELYTWGKGRYGRLGHGDSEDQLL-PKVVEALRGNRVIDVACGSGDAQTLCLTDDDC 3567

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G   +G+LG G +     P  +  L  +G V ++  G  + +A+T +G VY++G G
Sbjct: 3568 VWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLG-VSKVECGSQFSVALTRSGAVYTWGKG 3626

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              + LGHG      +P+ +     +G  V+ ++ G  H VA   +G VYTWG    G LG
Sbjct: 3627 DYYRLGHGVDDHVRRPKRVAAL--QGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLG 3684

Query: 358  HG 359
             G
Sbjct: 3685 DG 3686



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 6/209 (2%)

Query: 272  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVS 330
            V QIA G   + AV+ +G V++ G  +N  LG G     +  PR I+      +  V V 
Sbjct: 2456 VQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVH 2515

Query: 331  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
            +G  H +AL   G +++WG+G  G LGHG+ ++   P+ + + KS     +      +  
Sbjct: 2516 SGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAA 2575

Query: 391  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTD 448
            ++ +G +Y +G   +G LG  D       L+P+ + S  +H V  I+ G     T+ +TD
Sbjct: 2576 ILSSGELYTWGLGEYGRLGHGDNYTH---LKPKKVQSFTSHRVIDIACGSRDAQTLALTD 2632

Query: 449  RGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             G ++ +GD +  +LG     GC  P  +
Sbjct: 2633 DGTVWSWGDGDFGKLGRGGSEGCSVPNPV 2661



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G ++  G N  GQLG  +      P++I  L  +   VQI  G   + AVT  G VY+ G
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASI-RPVQIVGGEQTLFAVTAEGKVYATG 3412

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G    LG G        + +++ +   +  V V +G +H +AL + G VY+WG+G  G 
Sbjct: 3413 YGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGK 3472

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+      P  + +L+    + +      +  +     +Y +G   +G LG    G 
Sbjct: 3473 LGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLG---HGD 3529

Query: 416  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            S+  L P+++++LR + V  ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 3530 SEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKI 3589

Query: 474  PTEI 477
            P ++
Sbjct: 3590 PMKV 3593



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)

Query: 313 PRAIQTFRRKGIHVVRVSAGD-EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
           P  ++   RK   V  V+  D +H +AL   G VY+WG G  G LGHGD   +  P  ++
Sbjct: 5   PAELECLSRKCEIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVT 64

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
            L     +++      +  +   G +Y +G   +G LG    G S+  L P ++  LR H
Sbjct: 65  GLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLG---HGSSEDQLVPVLVSGLRGH 121

Query: 432 HVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           H+  ++  +G  HT+   D G ++ +GD +  +LG     GC  P  I
Sbjct: 122 HIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSI 169



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 83/185 (44%), Gaps = 5/185 (2%)

Query: 119 TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G  HTL  ++  +V+S G    G LG G  +  C +   I       V +V      + 
Sbjct: 130 SGDAHTLAAADDGTVWSWGDGDYGKLGRG-GSDGCKNPKSIERLQGLGVCKVYCGAQFSL 188

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + G V+T G    F  GH  T   +  P+LVEAL G     V+ G      LT  G 
Sbjct: 189 ALTRDGSVWTWGKGEGFRLGH-GTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGE 247

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V+  G N  GQLG  D   RP P  ++ L   G +V IA GP+   A +  G  +S G+ 
Sbjct: 248 VYCWGRNDQGQLGDIDCQIRPEPTLVSGLASKG-IVGIACGPAQSFAWSCAG-QWSVGTR 305

Query: 298 SNFCL 302
             FC+
Sbjct: 306 LQFCV 310



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 6/158 (3%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQV 381
             + V +++ G + + A+   G V+  G+   G LG G    + T+P  + +L S +  +V
Sbjct: 2453 ALKVQQIAGGSKTLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKV 2512

Query: 382  CARK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
                  R    L   G ++ +G    G LG  +R   D    P+++D+ ++  V  +S G
Sbjct: 2513 SVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCD---HPKLIDTFKSSCVRDMSCG 2569

Query: 440  LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
              H+  +   G L+ +G  E  +LGH      L+P ++
Sbjct: 2570 SSHSAAILSSGELYTWGLGEYGRLGHGDNYTHLKPKKV 2607



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 7/183 (3%)

Query: 106  IVETSAGNQM---QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
            +VE   GN++      +G   TL L  +  V+S G    G LG G  +  C    ++   
Sbjct: 3538 VVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRG-GSDGCKIPMKVESL 3596

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
                V +V      +  + +SG V+T G    +  GH   +  + RP+ V AL+G     
Sbjct: 3597 IGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGH-GVDDHVRRPKRVAALQGKKVIT 3655

Query: 222  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            +  G       T  G V+T G N  GQLG G T     P+ +  L+    + ++A G ++
Sbjct: 3656 IATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQG-KKISRVACGSAH 3714

Query: 282  MLA 284
             +A
Sbjct: 3715 TIA 3717



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            SG +Y WG  + G LG  +     LP+ + +L S   VQ+   ++  F +   G VY   
Sbjct: 3353 SGTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYA-- 3410

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
              G+G  G    G +D V   ++L+SL+   V +++  +G  H + ++  G ++ +G+ +
Sbjct: 3411 -TGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGD 3469

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LGH     C  P  I
Sbjct: 3470 DGKLGHGNRNSCDRPRVI 3487



 Score = 44.7 bits (104), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 5/160 (3%)

Query: 126  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
            L  + +V+S G    G LG G  +  C     +       V +V+     +  +  SG V
Sbjct: 2630 LTDDGTVWSWGDGDFGKLGRG-GSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLV 2688

Query: 186  FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            +T G    +  GH  DT+  + +P++V+ L+G     V  G      +T  G V   G N
Sbjct: 2689 WTWGKGDYYRLGHGNDTH--VRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDN 2746

Query: 245  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
             HGQ G+  T     P+ +  LE    + ++A G S+ +A
Sbjct: 2747 DHGQQGNNTTTVNRRPQLVNGLEG-QKITRVACGSSHSIA 2785


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 155/316 (49%), Gaps = 9/316 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA   VQ++  E     V   G+V+  G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4323 SALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDS-VMVPTLLESIQHVFVKK 4381

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 278
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 4382 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEEL--LGTEIVDIACG 4439

Query: 279  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4440 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4499

Query: 339  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +G++Y
Sbjct: 4500 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4559

Query: 399  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4560 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4616

Query: 459  ERAQLGHDTLRGCLEP 474
            +  QLG  T      P
Sbjct: 4617 DEGQLGDGTTSALQRP 4632



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 205  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 3280 IKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIP 3339

Query: 265  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             L + +   + + +G  + LA+T +G ++S+G G +  LGHG      +PR I++ + K 
Sbjct: 3340 FLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKR 3399

Query: 324  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 382
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +QV  
Sbjct: 3400 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVAC 3457

Query: 383  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
             +R  +T  L   GSVY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 3458 GSRDAQTMALTADGSVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3514

Query: 442  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3515 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3548



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 163/342 (47%), Gaps = 17/342 (4%)

Query: 110  SAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-- 166
            SA   +Q+T G    L ++ +  V++ G    G LG G   +  V        S  HV  
Sbjct: 4323 SALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVPTL---LESIQHVFV 4379

Query: 167  --VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVT 223
              V V++   H   +   G V++ G+      GH   NR ++ RP+L+E L G     + 
Sbjct: 4380 KKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLMYDRPKLIEELLGTEIVDIA 4437

Query: 224  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 282
             G + +  +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   + V   +G +  
Sbjct: 4438 CGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQT 4497

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            L VT +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  S
Sbjct: 4498 LCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRS 4555

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            G +YTWGKG    LGHG +     P  +++L+    + +           D G V+ +G 
Sbjct: 4556 GAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGD 4615

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               G LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4616 NDEGQLG---DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4654



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 189
            +++CG    G LG G ++  C     I F S   + +++      HA  + Q G++F+ G
Sbjct: 3313 LYACGEGTNGRLGLGDDSNVC-EPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWG 3371

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 3372 EGEDGKLGHGNS-VSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 3430

Query: 250  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            GHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3431 GHGDTATQMKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3488

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3489 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3546

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P  +  L+    V V         + DTG VY +G    G  G     V+ K   P ++ 
Sbjct: 3547 PTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKK---PSLVH 3603

Query: 427  SLRAHHVSQISTGLYHTV--VVTDR 449
             L    V+++S G  H++  V+TD+
Sbjct: 3604 ELDDARVNRVSCGSSHSIAWVLTDQ 3628



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 153/320 (47%), Gaps = 17/320 (5%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 3278 SKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 3336

Query: 210  LVEALKGVPCKQ--VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
            L+  L     K+  V +G      LT  G + + G    G+LGHG+++    P+ I  L+
Sbjct: 3337 LIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLK 3396

Query: 268  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
                +  IA G  +  A+T +G +Y++G G    LGHG+   +++P+ +Q+    G  V+
Sbjct: 3397 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSL--VGQRVI 3453

Query: 328  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    
Sbjct: 3454 QVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGA 3513

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   V  ++ G  H + 
Sbjct: 3514 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLA 3570

Query: 446  VTDRGRLFGFGDNERAQLGH 465
            VTD G+++ +GDN+  Q G+
Sbjct: 3571 VTDTGQVYAWGDNDHGQQGN 3590



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 124/261 (47%), Gaps = 14/261 (5%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             +M + +G  H L L  +  +FS G    G LGHG      VS  +   I    +  +  
Sbjct: 3347 KKMAVHSGGKHALALTQDGKIFSWGEGEDGKLGHG----NSVSLDKPRLIESLKSKRIRD 3402

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN- 227
            ++    H+A +  SG+++T G       GH DT   + +P+LV++L G    QV  G   
Sbjct: 3403 IACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQM-KPKLVQSLVGQRVIQVACGSRD 3461

Query: 228  -FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
              T  LT  G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T
Sbjct: 3462 AQTMALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALT 3520

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
              G V+++G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY
Sbjct: 3521 KYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVVHVAVGALHCLAVTDTGQVY 3578

Query: 347  TWGKGYCGALGHGDEIDKTLP 367
             WG    G  G+G  I    P
Sbjct: 3579 AWGDNDHGQQGNGSTIVNKKP 3599



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   +LAVT +G VY
Sbjct: 4292 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLLAVTADGKVY 4347

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 4348 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4407

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4408 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4467

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4468 ---SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4524

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4525 CKIPMKI 4531



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 10/244 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 3317

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+N  LG G+  +  +P+ I    +  I  + V +G +H +AL   G +++WG+G  G 
Sbjct: 3318 EGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGK 3377

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+ +    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 3378 LGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 3437

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                ++P+++ SL    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 3438 Q---MKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGSDGCYT 3494

Query: 474  PTEI 477
            P  I
Sbjct: 3495 PLLI 3498



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 4/232 (1%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT    V++ G+   G+LGHGD +    PK +  L +  ++  IA G +Y   ++ NG +
Sbjct: 520 LTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVD-KNITFIACGSTYSAVLSSNGEL 578

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y++G G+   LGHG   + L P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 579 YTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDG 638

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 639 NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLG-- 696

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G  + +  P++++ L    V ++  G +H + +T+   ++G+G N+  Q+
Sbjct: 697 -HGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQI 747



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 122/261 (46%), Gaps = 23/261 (8%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++
Sbjct: 512 SDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITF--------IA 563

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNF 228
               ++A +  +G+++T G  +    GH +++  +  P LV AL G     V   +G + 
Sbjct: 564 CGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDN-VLIPTLVTALNGHMVVHVACGSGDSQ 622

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T  
Sbjct: 623 TLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTAY 681

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY++G G  + LGHG +     P+ I+    K   V  +  G+ HV+AL     VY W
Sbjct: 682 GEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTK--KVKELCVGNFHVLALTEDQLVYGW 739

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G+   G +     +   +PEP
Sbjct: 740 GRNDYGQIDPA--LGTVVPEP 758



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 17/195 (8%)

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           +L+++GN  +  +GS + +            P+ +  F  K + ++   +   H +AL  
Sbjct: 475 ILSISGNVYMMYYGSETQY------------PQRVYGFSEKPVTMIASHSDGTHYLALTQ 522

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
              VY+WG G  G LGHGD +    P+ + +L       +      + VL   G +Y +G
Sbjct: 523 DSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWG 582

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
              +G LG    G SD VL P ++ +L  H V  ++  +G   T+ VT  G +F +GD  
Sbjct: 583 RGNYGRLG---HGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGN 639

Query: 460 RAQLGHDTLRGCLEP 474
             +LG     G   P
Sbjct: 640 YGKLGRGGCDGSKTP 654


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 154/316 (48%), Gaps = 9/316 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3815 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMVPTLLESIQHVFVKK 3873

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 278
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V IA G
Sbjct: 3874 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDIACG 3931

Query: 279  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
              +  A+T  G +Y++G G    LGHG+  D+L P+ I+  +   +  V   +GD   + 
Sbjct: 3932 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLC 3991

Query: 339  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +G++Y
Sbjct: 3992 VTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIY 4051

Query: 399  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  TD+G +F +GDN
Sbjct: 4052 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDN 4108

Query: 459  ERAQLGHDTLRGCLEP 474
            +  QLG  T      P
Sbjct: 4109 DEGQLGDGTTSALQRP 4124



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 135/274 (49%), Gaps = 8/274 (2%)

Query: 205  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
            I  P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I 
Sbjct: 2811 IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIP 2870

Query: 265  PLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             L + V   V + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K 
Sbjct: 2871 FLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKR 2930

Query: 324  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC- 382
            I    ++ G  H  A+ SSG +YTWG G  G LGHGD   ++ P+ + SL     +Q+  
Sbjct: 2931 IR--DIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIAC 2988

Query: 383  -ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
             +R  +T  L   G VY +G   FG LG   RG SD    P ++D L    V QI  G  
Sbjct: 2989 GSRDAQTMALTADGLVYSWGDGDFGKLG---RGGSDGCYTPLLIDRLNGLGVVQIECGAQ 3045

Query: 442  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3046 FSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3079



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 158/325 (48%), Gaps = 16/325 (4%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 189
            +++CG    G LG G ++  C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 2844 LYACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWG 2902

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +      GH ++   + +PRL+E+LK    + +  G   +  +T  G ++T G   +G+L
Sbjct: 2903 EGEDGKLGHGNSIS-LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRL 2961

Query: 250  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            GHGDT  +  PK +  L  VG  V+QIA G   +  +A+T +G+VYS+G G    LG G 
Sbjct: 2962 GHGDTATQSKPKLVQSL--VGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG 3019

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
                  P  I   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3020 SDGCYTPLLID--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3077

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P  +  L+    + V         + D G VY +G    G  G    G +    +P ++ 
Sbjct: 3078 PTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQG---NGTTIVNKKPSLVH 3134

Query: 427  SLRAHHVSQISTGLYHTV--VVTDR 449
             L    V+++S G  H++  V+TD+
Sbjct: 3135 ELDDARVNRVSCGSSHSIAWVLTDQ 3159



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 161/342 (47%), Gaps = 17/342 (4%)

Query: 110  SAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-- 166
            SA   +Q+T G      ++ +  V++ G    G LG G   +  V        S  HV  
Sbjct: 3815 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMVPTL---LESIQHVFV 3871

Query: 167  --VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVT 223
              V V++   H   +   G V++ G+      GH   NR  + RP+L+E L G     + 
Sbjct: 3872 KKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDIA 3929

Query: 224  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 282
             G + +  +T  G ++T G   +G+LGHGD+ D+ TPK I  L++   + V   +G +  
Sbjct: 3930 CGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQT 3989

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            L VT +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  S
Sbjct: 3990 LCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRS 4047

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            G +YTWGKG    LGHG +     P  +++L+    + +           D G V+ +G 
Sbjct: 4048 GAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGD 4107

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               G LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4108 NDEGQLG---DGTTSALQRPRLVHALQGKKITRVACGSAHTL 4146



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 17/322 (5%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            ++I  P  + V      V ++        V Q G+++ CG+ ++   G  D +  +  P+
Sbjct: 2809 SKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSN-VCEPK 2867

Query: 210  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
             +  L     K+V   +G      LT  G V + G    G+LGHG+++    P+ I  L+
Sbjct: 2868 PIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLK 2927

Query: 268  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
                +  IA G  +  A+T +G +Y++G G    LGHG+   + +P+ +Q+    G  V+
Sbjct: 2928 S-KRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTATQSKPKLVQSL--VGQRVI 2984

Query: 328  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            +++ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQ+    
Sbjct: 2985 QIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGA 3044

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   +  ++ G  H + 
Sbjct: 3045 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLA 3101

Query: 446  VTDRGRLFGFGDNERAQLGHDT 467
            VTD G+++ +GDN+  Q G+ T
Sbjct: 3102 VTDIGQVYAWGDNDHGQQGNGT 3123



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3784 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 3839

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3840 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 3899

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG   
Sbjct: 3900 DGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLG--- 3956

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 3957 HGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4016

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4017 CKIPMKI 4023



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 114/244 (46%), Gaps = 10/244 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            V+  G N   QLG   G  +  P    +  L ++  V  IA G   +  V+  G +Y+ G
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEV--LSKLKPV-HIAGGSKTLFVVSQEGKLYACG 2848

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+N  LG G+  +  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2849 EGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 2908

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+ I    P  + SLKS     +      +  +  +G +Y +G   +G LG  D   
Sbjct: 2909 LGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDTAT 2968

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
              K   P+++ SL    V QI+ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 2969 QSK---PKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYT 3025

Query: 474  PTEI 477
            P  I
Sbjct: 3026 PLLI 3029



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 118/253 (46%), Gaps = 13/253 (5%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 176
            G++   L  +  VFS G    G LGHG      +S  +   I    +  +  ++    H+
Sbjct: 2886 GKHALALTQDGKVFSWGEGEDGKLGHG----NSISLDKPRLIESLKSKRIRDIACGSGHS 2941

Query: 177  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 234
            A +  SG+++T G       GH DT     +P+LV++L G    Q+  G     T  LT 
Sbjct: 2942 AAITSSGELYTWGLGEYGRLGHGDTATQ-SKPKLVQSLVGQRVIQIACGSRDAQTMALTA 3000

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
             G V++ G    G+LG G +    TP  I  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3001 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3059

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+   G VY WG    G
Sbjct: 3060 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDIGQVYAWGDNDHG 3117

Query: 355  ALGHGDEIDKTLP 367
              G+G  I    P
Sbjct: 3118 QQGNGTTIVNKKP 3130



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 31/266 (11%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L  ++SV+S G+  CG LGHG       P+  + +    I F        ++
Sbjct: 509 SDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITF--------IA 560

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG---LN 227
               ++A +  +G+++T G  +    GH ++++ +  P LV AL G     V  G     
Sbjct: 561 CGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDP 620

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            T  +T  G V + G   HG+LG G      TPK +  L ++ +V ++  G  +  A+T 
Sbjct: 621 QTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDI-NVAKVYCGQQFSAALTA 679

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            G VY++G G ++ LGHG +     P+ I   + K I  + +  G  HV+AL     VY 
Sbjct: 680 YGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYI--GHLHVLALTEDQLVYG 737

Query: 348 WGKGYCGALGHGDEIDKTL----PEP 369
           WG+       HG +ID  L    PEP
Sbjct: 738 WGRN-----DHG-QIDPALGTIVPEP 757



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 12/247 (4%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT    V++ G+   G+LGHG+      PK I  L E  ++  IA G +Y  A++ NG +
Sbjct: 517 LTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVE-KNITFIACGSTYSAALSSNGEL 575

Query: 292 YSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAG---DEHVVALDSSGYVYT 347
           Y++G G+   LGHG    D + P  +      G  VV V+ G   D   + + +SG V++
Sbjct: 576 YTWGRGNYGKLGHGNSDKDVMIPTLVTAL--NGHMVVYVACGGGRDPQTLCVTASGIVFS 633

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG G  G LG G       P+ +  L      +V   ++ +  L   G VY +G      
Sbjct: 634 WGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYK 693

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG    G  D V  P+I+D L+   +  +  G  H + +T+   ++G+G N+  Q+  D 
Sbjct: 694 LG---HGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQI--DP 748

Query: 468 LRGCLEP 474
             G + P
Sbjct: 749 ALGTIVP 755



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 12/264 (4%)

Query: 142 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 201
           ++ +G ET +   F+         ++   +   H   + Q   V++ G+      GH + 
Sbjct: 484 MMYYGSETQRVYGFSE----KPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNM 539

Query: 202 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTP 260
                 P+L+EAL       +  G  ++  L+  G ++T G   +G+LGHG++  D   P
Sbjct: 540 TW-YDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIP 598

Query: 261 KSIAPLEEVGSVVQIAAG---PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
             +  L     VV +A G       L VT +G+V+S+G G++  LG G       P+ + 
Sbjct: 599 TLVTALNG-HMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVD 657

Query: 318 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 377
                 I+V +V  G +   AL + G VYTWGKG    LGHG+E     P+ +  LK+  
Sbjct: 658 KLL--DINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKK 715

Query: 378 AVQVCARKRKTFVLVDTGSVYGFG 401
              +         L +   VYG+G
Sbjct: 716 IKDLYIGHLHVLALTEDQLVYGWG 739



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 96/225 (42%), Gaps = 21/225 (9%)

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 313
           T + P+P     + E+G + Q+      ++ ++ NG VY    GS             + 
Sbjct: 446 TFNGPSPVYYDTISELG-IKQLCCTERAVIILSVNGNVYMMYYGS-------------ET 491

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
           + +  F  K I ++   +   H +AL     VY+WG G CG LGHG+      P+ + +L
Sbjct: 492 QRVYGFSEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEAL 551

Query: 374 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK-VLRPRILDSLRAHH 432
                  +      +  L   G +Y +G   +G LG    G SDK V+ P ++ +L  H 
Sbjct: 552 VEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLG---HGNSDKDVMIPTLVTALNGHM 608

Query: 433 VSQISTG---LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           V  ++ G      T+ VT  G +F +GD    +LG     G   P
Sbjct: 609 VVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTP 653


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 22/329 (6%)

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
           C+    + F     V  +S    HAA V + G++++ G+ S    GH   +  + +P+L+
Sbjct: 98  CLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGH-GVDCDVSQPKLI 156

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEE 268
           +AL  +  + V  G   T  +T+ G ++T G  T   G LGHG+ +    PK +  PLE 
Sbjct: 157 DALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEG 216

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
           +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  VR
Sbjct: 217 I-HVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESL--KGLRTVR 273

Query: 329 VSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
            + G  H  A+             SSG ++TWG G  G LGHGD+  K +P  +++L   
Sbjct: 274 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 333

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
              QV      T  L  +G VY  G   +G LG      +D +L  R+   L  + V +I
Sbjct: 334 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQ---ADGMLPVRVEGKLHKNFVEEI 390

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           S G YH  V+T R  ++ +G     +LGH
Sbjct: 391 SCGAYHVAVLTSRTEVYTWGKGANGRLGH 419



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 167 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KHVNGPLEGIHVSSISCG 225

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 226 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 284

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 285 VEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCQVACGHC 343

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 344 LTVALTTSGHVYTMGSAVYGQLGN-TQADGMLPVRVEGKLHKNF-VEEISCGAYHVAVLT 401

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  DK  P  + +LK
Sbjct: 402 SRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALK 435



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 26/222 (11%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   VT  G +YS+G  S   LGHG   D  QP+ I       I +V  + 
Sbjct: 112 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELV--AC 169

Query: 332 GDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARK 385
           G+ H  A+  SG +YTWG G    G LGHG+++   +P+    PL  +  H++   C   
Sbjct: 170 GEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGI--HVSSISCG-P 226

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T ++   G ++ FG   FG LG  DR   + +  PR ++SL+     + + G++HT  
Sbjct: 227 WHTALVTSAGQLFTFGDGSFGVLGHGDR---ESISVPREVESLKGLRTVRAACGVWHTAA 283

Query: 446 VTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           V +             G++F +GD ++ +LGH      L PT
Sbjct: 284 VVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPT 325



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT L++++  +F+ G    GVLGHG    + +S  R +        V+ +    
Sbjct: 222 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDR--ESISVPREVESLKGLRTVRAACGVW 279

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 280 HTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 338

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 339 ACGHCLTVALTTSGHVYTMGSAVYGQLGNTQA-DGMLPVRVEGKLHKNFVEEISCGAYHV 397

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  V
Sbjct: 398 AVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSV 442



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 8/174 (4%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           + D L P+ ++   R  + V  +S G  H   +   G +Y+WG+   G LGHG + D + 
Sbjct: 95  KMDCLVPKPLEFAVR--LDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQ 152

Query: 367 PEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR 423
           P+ + +L SH+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V +  
Sbjct: 153 PKLIDAL-SHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-H 209

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   L   HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 210 VNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREV 263



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 11/194 (5%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE  AGN              S+  +F+ G    G LGHG +  +
Sbjct: 270 RTVRAACGVWHTAAVVEVMAGNSSSSNC--------SSGKIFTWGDGDKGRLGHGDKEAK 321

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T +      +  QV+        +  SG V+T G       G+   +  +   R+ 
Sbjct: 322 LVP-TCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQADG-MLPVRVE 379

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
             L     ++++ G      LT R  V+T G   +G+LGHGDT D+ TP  +  L++   
Sbjct: 380 GKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKD-KQ 438

Query: 272 VVQIAAGPSYMLAV 285
           V  +  G ++  A+
Sbjct: 439 VRSVVCGINFTAAI 452



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 9/130 (6%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQ 168
           N  Q+  G   T+ ++ S  V++ GS++ G LG+    TQ      +      H   V +
Sbjct: 334 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGN----TQADGMLPVRVEGKLHKNFVEE 389

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           +S    H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NF
Sbjct: 390 ISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDK-NTPTLVEALKDKQVRSVVCGINF 448

Query: 229 TGFLTIRGHV 238
           T  + I   V
Sbjct: 449 TAAICIHKWV 458


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 156/315 (49%), Gaps = 7/315 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA   +Q++  E     V   G++++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 4025 SALRPIQLAGGEQTLFAVTADGKIYSTGYGAAGRLGIGGTDS-VMIPTLLESIQHVFIKK 4083

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  L  V  +V IA G 
Sbjct: 4084 VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGV-EIVDIACGG 4142

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4143 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4202

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4203 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYT 4262

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN+
Sbjct: 4263 WGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4319

Query: 460  RAQLGHDTLRGCLEP 474
              QLG  T      P
Sbjct: 4320 EGQLGDGTTSALHRP 4334



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 145/298 (48%), Gaps = 9/298 (3%)

Query: 181  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
            Q   V+  G N     G    ++ I  P   E L  +    +  G      ++  G ++ 
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSK-IKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYA 3068

Query: 241  CGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            CG  T+G+LG GD  +   PK+I  L + V   V + +G  + LA+T +G V+S+G G +
Sbjct: 3069 CGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGED 3128

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
              LGHG      +P+ I+  + K I    ++ G  H  A+ S+G +YTWG G  G LGHG
Sbjct: 3129 GKLGHGNCISLDKPKLIEVLKSKRIR--DIACGSGHSAAIASNGELYTWGLGEYGRLGHG 3186

Query: 360  DEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
            D I +T P+ + +L  H  VQV   +R  +T  L   G VY +G   FG LG   RG SD
Sbjct: 3187 DTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLG---RGGSD 3243

Query: 418  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
                P ++D L    V Q+  G   ++ +T  G ++ +G  +  +LGH       +PT
Sbjct: 3244 GCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 3301



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 150/311 (48%), Gaps = 13/311 (4%)

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 235
             V Q G+++ CG+ ++   G  D N  +  P+ +  L     K+V   +G      LT  
Sbjct: 3059 IVSQEGKLYACGEGTNGRLGLGDDNN-MCEPKAIPFLSQFVIKKVAVHSGGKHALALTQD 3117

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G V + G    G+LGHG+ +    PK I  L+    +  IA G  +  A+  NG +Y++G
Sbjct: 3118 GKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKS-KRIRDIACGSGHSAAIASNGELYTWG 3176

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYC 353
             G    LGHG+   + +P+ +Q     G  VV+V+ G  D   +AL + GYVY+WG G  
Sbjct: 3177 LGEYGRLGHGDTITQTRPKLVQAL--IGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDF 3234

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            G LG G       P  +  L +   +QV    + +  L   G V+ +G   +  LG    
Sbjct: 3235 GKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLG---H 3291

Query: 414  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            G    V +P +++ LR   +  ++ G  H + VTD G+++ +GDN+  Q G+ T     +
Sbjct: 3292 GNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRK 3351

Query: 474  PTEIFIQEMEE 484
            P+   + ++E+
Sbjct: 3352 PS--LVHDLED 3360



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 10/246 (4%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 293
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G +YS
Sbjct: 3994 GAIYGWGHNHRGQLGG---LEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYS 4050

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
             G G+   LG G     + P  +++ +   I  V VS+G +H +AL S G+VY+WG+G  
Sbjct: 4051 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDD 4110

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            G LGHG+++    P+ +  L     V +      +  +   G +Y +G   +G LG  D 
Sbjct: 4111 GKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD- 4169

Query: 414  GVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
              SD  LRP+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     GC
Sbjct: 4170 --SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4227

Query: 472  LEPTEI 477
              P +I
Sbjct: 4228 KVPLKI 4233



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 16/325 (4%)

Query: 126  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQ 181
            + ++  ++S G    G LG G   T  V    +   S  HV    V VS+   H   +  
Sbjct: 4042 VTADGKIYSTGYGAAGRLGIG--GTDSVMIPTL-LESIQHVFIKKVAVSSGGKHCIALSS 4098

Query: 182  SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             G V++ G+      GH   N+  + RP+L+E L GV    +  G + +  +T  G ++T
Sbjct: 4099 EGHVYSWGEGDDGKLGH--GNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYT 4156

Query: 241  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSN 299
             G   +G+LGHGD+ D+  PK +  L++   + V   +G +  L VT +  V+S+G G  
Sbjct: 4157 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4216

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
              LG G       P  I +    G+ VV+V  G +  VAL  SG VYTWGKG    LGHG
Sbjct: 4217 GKLGRGGSDGCKVPLKIDSL--AGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4274

Query: 360  DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
             +     P  +++L+    + +           D G V+ +G    G LG    G +  +
Sbjct: 4275 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG---DGTTSAL 4331

Query: 420  LRPRILDSLRAHHVSQISTGLYHTV 444
             RPR++ +L+   +++++ G  HT+
Sbjct: 4332 HRPRLVHALQGKKITRVACGSAHTL 4356



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 149/318 (46%), Gaps = 14/318 (4%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 189
            +++CG    G LG G +   C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 3066 LYACGEGTNGRLGLGDDNNMC-EPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 3124

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +      GH +    + +P+L+E LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 3125 EGEDGKLGHGNCIS-LDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 3183

Query: 250  GHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            GHGDT+ +  PK +  L  +G  VVQ+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3184 GHGDTITQTRPKLVQAL--IGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGG 3241

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
                  P  +   R   + V++V  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3242 SDGCYTPLLVD--RLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3299

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P  +  L+    + V         + DTG VY +G    G  G    G +    +P ++ 
Sbjct: 3300 PTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTSVNRKPSLVH 3356

Query: 427  SLRAHHVSQISTGLYHTV 444
             L    V+++S G  H++
Sbjct: 3357 DLEDARVNRVSCGSSHSI 3374



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 4/232 (1%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT  G V++ G+   G+LGHGDT+    PK I  L E  +++ IA G +Y  A++ NG +
Sbjct: 583 LTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLE-KNIIFIACGSTYSAALSANGEL 641

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y++G G+   LGHG   D + P  + T +   +  V   +GD   + + +SG V++WG G
Sbjct: 642 YTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDG 701

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G       P+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 702 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLG-- 759

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G  + V  P++++SLR   V  +S G  H + +T+   ++G+G N+  Q+
Sbjct: 760 -HGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQI 810



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 27/314 (8%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 176
            G++   L  +  VFS G    G LGHG     C+S  +   I    +  +  ++    H+
Sbjct: 3108 GKHALALTQDGKVFSWGEGEDGKLGHG----NCISLDKPKLIEVLKSKRIRDIACGSGHS 3163

Query: 177  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 234
            A +  +G+++T G       GH DT     RP+LV+AL G    QV  G     T  LT 
Sbjct: 3164 AAIASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQALIGHRVVQVACGSRDAQTMALTT 3222

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
             G+V++ G    G+LG G +    TP  +  L  +G V+Q+  G  + LA+T  G V+++
Sbjct: 3223 DGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLG-VIQVECGAQFSLALTKYGEVWTW 3281

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+  +G VY WG    G
Sbjct: 3282 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 3339

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
              G+G       P  +  L+        AR  +    V  GS +   W+       P  G
Sbjct: 3340 QQGNGTTSVNRKPSLVHDLED-------ARVNR----VSCGSSHSIAWVLVDQ---PSNG 3385

Query: 415  VSDKVLRPRILDSL 428
              D V  P + D L
Sbjct: 3386 NQDPVTFPTVRDPL 3399



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 126/271 (46%), Gaps = 9/271 (3%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           A   H   + Q G V++ G+      GH DT      P+L+EAL       +  G  ++ 
Sbjct: 575 ADGKHYLALTQDGCVYSWGNGDGGRLGHGDTIS-YDEPKLIEALLEKNIIFIACGSTYSA 633

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 288
            L+  G ++T G   +G+LGHG+  D  TP  +  L+   +VV +A  +G S  L VT +
Sbjct: 634 ALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKG-HTVVHVACGSGDSQTLCVTAS 692

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G+V+S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTW
Sbjct: 693 GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGSQFSAALTAHGEVYTW 750

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           GKG    LGHG E     P+ + SL+      +         L +   VYG+G   +G +
Sbjct: 751 GKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQI 810

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
              D  +   +  P +  +L +  V  +++G
Sbjct: 811 ---DPTLGPIISEPTLCPTLSSKTVIGLASG 838



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 26/289 (8%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQVSASENHA 176
           G+++  L  +  V+S G+   G LGHG      +S+       A    +++ ++    ++
Sbjct: 577 GKHYLALTQDGCVYSWGNGDGGRLGHG----DTISYDEPKLIEALLEKNIIFIACGSTYS 632

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 234
           A +  +G+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +T 
Sbjct: 633 AALSANGELYTWGRGNYGRLGHGNFDD-VMTPTLVTTLKGHTVVHVACGSGDSQTLCVTA 691

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY++
Sbjct: 692 SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGSQFSAALTAHGEVYTW 750

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G  + LGHG +     P+ I++ R +   V  +S G  H++AL    +VY WG+   G
Sbjct: 751 GKGDAYRLGHGSEEHVRYPKVIESLRDR--KVKDLSVGTTHILALTEDQFVYGWGRNDYG 808

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGFGW 402
                 +ID TL   +S         +C     KT + + +G    F W
Sbjct: 809 ------QIDPTLGPIISE------PTLCPTLSSKTVIGLASGPTQSFAW 845



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 16/218 (7%)

Query: 259 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 318
           TP     + E+G + Q+      ++ ++ NG VY+   GS          +   P+ +  
Sbjct: 514 TPFYCDAIAELG-IKQLCCTERALMILSLNGNVYNMYHGS----------ETQYPQRVHG 562

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
           F  K I ++   A  +H +AL   G VY+WG G  G LGHGD I    P+ + +L     
Sbjct: 563 FSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNI 622

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS- 437
           + +      +  L   G +Y +G   +G LG    G  D V+ P ++ +L+ H V  ++ 
Sbjct: 623 IFIACGSTYSAALSANGELYTWGRGNYGRLG---HGNFDDVMTPTLVTTLKGHTVVHVAC 679

Query: 438 -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +G   T+ VT  G +F +GD +  +LG     G   P
Sbjct: 680 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTP 717



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            ++  ++ D SG +Y WG  + G LG  +     LP P  SL +   +Q+   ++  F + 
Sbjct: 3984 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT 4043

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRG 450
              G +Y  G+   G LG    G +D V+ P +L+S++   + +  +S+G  H + ++  G
Sbjct: 4044 ADGKIYSTGYGAAGRLGI---GGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEG 4100

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+ +  +LGH
Sbjct: 4101 HVYSWGEGDDGKLGH 4115


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 156/315 (49%), Gaps = 7/315 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA   +Q++  E     V   G+V++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 3974 SALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDS-VMIPTLLESIQHVFIKK 4032

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  L  V  ++ IA G 
Sbjct: 4033 VAVSSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGV-EIIDIACGG 4091

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4092 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4151

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                 V++WG G  G LG G      +P  + SL     ++V    + +  L  +G+VY 
Sbjct: 4152 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYT 4211

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN+
Sbjct: 4212 WGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4268

Query: 460  RAQLGHDTLRGCLEP 474
              QLG  T      P
Sbjct: 4269 EGQLGDGTTSALHRP 4283



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 149/311 (47%), Gaps = 9/311 (2%)

Query: 168  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            QV+   +  A   Q   V+  G N     G    ++ I  P   E L  +    +  G  
Sbjct: 2946 QVAVQRSIDATPPQESAVYVWGLNDKDQLGGLKGSK-IKLPVYSEVLSKLKPIHIAGGSK 3004

Query: 228  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 286
                ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V + +G  + LA+T
Sbjct: 3005 TLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALT 3064

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G V+S+G G +  LGHG      +P+ I+T + K I    ++ G  H  A+ S+G +Y
Sbjct: 3065 QDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR--DIACGSGHSAAIASNGELY 3122

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMG 404
            TWG G  G LGHGD + +  P+ + +L  H  VQV   +R  +T  L   G VY +G   
Sbjct: 3123 TWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGD 3182

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            FG LG   RG SD    P +++ L    V Q+  G   ++ +T  G ++ +G  +  +LG
Sbjct: 3183 FGKLG---RGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3239

Query: 465  HDTLRGCLEPT 475
            H       +PT
Sbjct: 3240 HGNDHHVRKPT 3250



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 152/318 (47%), Gaps = 14/318 (4%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTCG 189
            +++CG    G LG G +   C     I F S   +  V V +   HA  + Q G+VF+ G
Sbjct: 3015 LYACGEGTNGRLGLGDDNNVC-EPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 3073

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +      GH + N  + +P+L+E LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 3074 EGEDGKLGHGN-NMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 3132

Query: 250  GHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            GHGDT+ +  PK +  L  VG  VVQ+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3133 GHGDTVTQARPKLVQTL--VGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG 3190

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
                  P  ++  R  G+ VV+V  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3191 SDGCYTPLVVE--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3248

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P  +  L+    V V         + DTG VY +G    G  G    G +    +P ++ 
Sbjct: 3249 PTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTSVNRKPSLVH 3305

Query: 427  SLRAHHVSQISTGLYHTV 444
             L    V+++S G  H++
Sbjct: 3306 ELEDARVNRVSCGSSHSI 3323



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 158/339 (46%), Gaps = 19/339 (5%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2980 SKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNN-VCEPK 3038

Query: 210  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    PK I  L+
Sbjct: 3039 PIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLK 3098

Query: 268  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
                +  IA G  +  A+  NG +Y++G G    LGHG+   + +P+ +QT    G  VV
Sbjct: 3099 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTL--VGHRVV 3155

Query: 328  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     VQV    
Sbjct: 3156 QVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGA 3215

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   +  ++ G  H + 
Sbjct: 3216 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLA 3272

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
            VTD G+++ +GDN+  Q G+ T     +P+   + E+E+
Sbjct: 3273 VTDTGQVYAWGDNDHGQQGNGTTSVNRKPS--LVHELED 3309



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 154/325 (47%), Gaps = 16/325 (4%)

Query: 126  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQ 181
            + ++  V+S G    G LG G   T  V    +   S  HV    V VS+   H   +  
Sbjct: 3991 VTADGKVYSTGYGAAGRLGIG--GTDSVMIPTL-LESIQHVFIKKVAVSSGGKHCLALSS 4047

Query: 182  SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             G V++ G+      GH   N+  + RP+L+E L GV    +  G + +  +T  G ++T
Sbjct: 4048 EGHVYSWGEGDDGKLGH--GNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYT 4105

Query: 241  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSN 299
             G   +G+LGHGD+ D+  PK +  L++   + V   +G +  L VT +  V+S+G G  
Sbjct: 4106 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4165

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
              LG G       P  I +    G+ V++V  G +  VAL  SG VYTWGKG    LGHG
Sbjct: 4166 GKLGRGGSDGCKVPLKIDSL--AGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4223

Query: 360  DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
             +     P  +++L+    + +           D G V+ +G    G LG    G +  +
Sbjct: 4224 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG---DGTTSAL 4280

Query: 420  LRPRILDSLRAHHVSQISTGLYHTV 444
             RPR++ +L+   +++++ G  HT+
Sbjct: 4281 HRPRLVHALQGKKITRVACGSAHTL 4305



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 129/246 (52%), Gaps = 10/246 (4%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 293
            G ++  G N  GQLG    L+ P  K  AP E + ++  +Q+A G   + AVT +G VYS
Sbjct: 3943 GAIYGWGHNHRGQLG---GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3999

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
             G G+   LG G     + P  +++ +   I  V VS+G +H +AL S G+VY+WG+G  
Sbjct: 4000 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDD 4059

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            G LGHG+++    P+ +  L     + +      +  +   G +Y +G   +G LG  D 
Sbjct: 4060 GKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD- 4118

Query: 414  GVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
              SD  LRP+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     GC
Sbjct: 4119 --SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGC 4176

Query: 472  LEPTEI 477
              P +I
Sbjct: 4177 KVPLKI 4182



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 119/232 (51%), Gaps = 4/232 (1%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT  G V++ G+   G+LGHGDT+    PK I  L E  ++V IA G +Y  A++ +G +
Sbjct: 524 LTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLE-KNIVFIACGSTYSAALSVSGEL 582

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y++G G+   LGHG   D + P  + T +   +  V   +GD   + + +SG V++WG G
Sbjct: 583 YTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDG 642

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G       P+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 643 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLG-- 700

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G  + V  P+I++SLR   +  +S G  H +V+T+   ++G+G N+  Q+
Sbjct: 701 -HGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQI 751



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 9/268 (3%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   + Q G V++ G+      GH DT      P+L+EAL       +  G  ++  L+
Sbjct: 519 KHHLALTQDGCVYSWGNGDGGRLGHGDT-VSYDEPKLIEALLEKNIVFIACGSTYSAALS 577

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 291
           + G ++T G   +G+LGHG+  D   P  +  L+   +VV +A  +G S  L VT +G+V
Sbjct: 578 VSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKG-HTVVHVACGSGDSQTLCVTASGIV 636

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTWGKG
Sbjct: 637 FSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGSQFSAALTAHGEVYTWGKG 694

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
               LGHG E     P+ + SL+      +        VL +   VYG+G   +G +   
Sbjct: 695 DTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQI--- 751

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTG 439
           D  +   +  P +  +L +  V  +++G
Sbjct: 752 DPTLGSVISEPTLCPTLSSKTVIGLASG 779



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 116/249 (46%), Gaps = 21/249 (8%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 172
            G++   L  +  VFS G    G LGHG       P+  + +   RI          ++  
Sbjct: 3057 GKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIR--------DIACG 3108

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 230
              H+A +  +G+++T G       GH DT     RP+LV+ L G    QV  G     T 
Sbjct: 3109 SGHSAAIASNGELYTWGLGEYGRLGHGDTVTQA-RPKLVQTLVGHRVVQVACGSRDAQTM 3167

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             LT  G V++ G    G+LG G +    TP  +  L  +G VVQ+  G  + LA+T  G 
Sbjct: 3168 ALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLG-VVQVECGAQFSLALTKYGE 3226

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            V+++G G  F LGHG  H   +P  ++  R  G  +V V+ G  H +A+  +G VY WG 
Sbjct: 3227 VWTWGKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGD 3284

Query: 351  GYCGALGHG 359
               G  G+G
Sbjct: 3285 NDHGQQGNG 3293



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 164/363 (45%), Gaps = 34/363 (9%)

Query: 46  HGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSD 105
           +G  P    ++ +L   QLC        +S N  +   N  +G+     ++ Q V   SD
Sbjct: 452 NGSTPFYCDAIAELGIKQLCCTERALMILSLNGNV--YNMYHGS---ETQYPQRVHGFSD 506

Query: 106 IVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-- 163
            + T   +    + G++H  L  +  V+S G+   G LGHG      VS+       A  
Sbjct: 507 KLVTMIASH---SDGKHHLALTQDGCVYSWGNGDGGRLGHG----DTVSYDEPKLIEALL 559

Query: 164 -AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             ++V ++    ++A +  SG+++T G  +    GH + +  +  P LV  LKG     V
Sbjct: 560 EKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDD-VMIPTLVTTLKGHTVVHV 618

Query: 223 T--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
              +G + T  +T  G V + G   +G+LG G T    TPK +  L ++ +VV++  G  
Sbjct: 619 ACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGSQ 677

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           +  A+T +G VY++G G  + LGHG +     P+ I++ R K I    +S G  H++ L 
Sbjct: 678 FSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIK--DLSVGATHILVLT 735

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYG 399
              +VY WG+   G      +ID TL   +S         +C     KT + + +G    
Sbjct: 736 EDQFVYGWGRNDYG------QIDPTLGSVISE------PTLCPTLSSKTVIGLASGPTQS 783

Query: 400 FGW 402
           F W
Sbjct: 784 FAW 786



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 16/218 (7%)

Query: 259 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 318
           TP     + E+G + Q+      ++ ++ NG VY+   GS          +   P+ +  
Sbjct: 455 TPFYCDAIAELG-IKQLCCTERALMILSLNGNVYNMYHGS----------ETQYPQRVHG 503

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
           F  K + ++   +  +H +AL   G VY+WG G  G LGHGD +    P+ + +L     
Sbjct: 504 FSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNI 563

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS- 437
           V +      +  L  +G +Y +G   +G LG    G  D V+ P ++ +L+ H V  ++ 
Sbjct: 564 VFIACGSTYSAALSVSGELYTWGRGNYGRLG---HGNFDDVMIPTLVTTLKGHTVVHVAC 620

Query: 438 -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +G   T+ VT  G +F +GD +  +LG     G   P
Sbjct: 621 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTP 658



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 70/135 (51%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            ++  ++ D SG +Y WG  + G LG  +     LP P  SL +   +Q+   ++  F + 
Sbjct: 3933 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT 3992

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRG 450
              G VY  G+   G LG    G +D V+ P +L+S++   + +  +S+G  H + ++  G
Sbjct: 3993 ADGKVYSTGYGAAGRLGI---GGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEG 4049

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+ +  +LGH
Sbjct: 4050 HVYSWGEGDDGKLGH 4064


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 155/315 (49%), Gaps = 7/315 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA   +Q++  E     V   G+V++ G  ++   G   T+  +  P L+E+++ V  K+
Sbjct: 3963 SALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGIGGTDS-VMVPTLLESIQHVFIKK 4021

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      L+  GHV++ G    G+LGHG+ L    PK +  L  +  +V IA G 
Sbjct: 4022 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGI-EIVDIACGG 4080

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   +  V   +GD   + +
Sbjct: 4081 HHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4140

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                 V++WG G  G LG G      +P  + SL     ++V    + +  L  +G+VY 
Sbjct: 4141 TDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYT 4200

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN+
Sbjct: 4201 WGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 4257

Query: 460  RAQLGHDTLRGCLEP 474
              QLG  T      P
Sbjct: 4258 EGQLGDGTTSALQRP 4272



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 149/311 (47%), Gaps = 10/311 (3%)

Query: 168  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            QV+A  +  A   QS  V+  G N     G    ++ I  P   E L  +    +  G  
Sbjct: 2937 QVTAQRSTDAPPQQSA-VYVWGLNDKDQLGGLKGSK-IKIPVRSEVLSKLKPIHIAGGSK 2994

Query: 228  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 286
                ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V + +G  + LA+T
Sbjct: 2995 TLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALT 3054

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G V+S+G G +  LGHG      +PR I++ + K I    ++ G  H  A+ S+G +Y
Sbjct: 3055 QDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIR--DIACGSGHSAAIASNGELY 3112

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMG 404
            TWG G  G LGHGD   +  P+ + +L     VQV   +R  +T  L   G VY +G   
Sbjct: 3113 TWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGD 3172

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            FG LG   RG SD    P ++D L    V Q+  G   ++ +T  G ++ +G  +  +LG
Sbjct: 3173 FGKLG---RGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3229

Query: 465  HDTLRGCLEPT 475
            H       +PT
Sbjct: 3230 HGNDHHVRKPT 3240



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 167/360 (46%), Gaps = 16/360 (4%)

Query: 114  QMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            Q Q+T  R        S+V+  G +    LG G + ++     R    S    + ++   
Sbjct: 2935 QEQVTAQRSTDAPPQQSAVYVWGLNDKDQLG-GLKGSKIKIPVRSEVLSKLKPIHIAGGS 2993

Query: 174  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGF 231
                 V Q G+++ CG+ ++   G  D +  +  P+L+  L     K+V   +G      
Sbjct: 2994 KTLFIVSQEGKLYACGEGTNGRLGLGD-DYNMCEPKLIPFLSQYVIKKVAVHSGGKHALA 3052

Query: 232  LTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
            LT  G V + G    G+LGHG+  TLD+P  + I  L+    +  IA G  +  A+  NG
Sbjct: 3053 LTQDGKVFSWGEGEDGKLGHGNCTTLDKP--RLIESLKS-KRIRDIACGSGHSAAIASNG 3109

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYT 347
             +Y++G G    LGHG+   +++P+ +Q     G  VV+V+ G  D   ++L + G VYT
Sbjct: 3110 ELYTWGLGEYGRLGHGDTATQMKPKLVQAL--SGQRVVQVACGSRDAQTMSLTADGCVYT 3167

Query: 348  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
            WG G  G LG G       P  +  L     VQV    + +  L   G V+ +G   +  
Sbjct: 3168 WGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFR 3227

Query: 408  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
            LG    G    V +P +++ LR   +  ++ G  H + VTD G+++ +GDN+  Q G+ T
Sbjct: 3228 LG---HGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGT 3284



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 16/325 (4%)

Query: 126  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQ 181
            + ++  V+S G    G LG G   +  V        S  HV    V V++   H   +  
Sbjct: 3980 VTADGKVYSTGYGAAGRLGIGGTDSVMVPTL---LESIQHVFIKKVAVNSGGKHCLALSS 4036

Query: 182  SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             G V++ G+      GH   NR  + RP+LVE L G+    +  G + +  +T  G ++T
Sbjct: 4037 EGHVYSWGEGDDGKLGH--GNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYT 4094

Query: 241  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSN 299
             G   +G+LGHGD+ D+  PK +  L++   + V   +G +  L VT +  V+S+G G  
Sbjct: 4095 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4154

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
              LG G       P  I +    G+ V++V  G +  VAL  SG VYTWGKG    LGHG
Sbjct: 4155 GKLGRGGSDGCKVPLKIDSL--AGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4212

Query: 360  DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
             +     P  +++L+    + +           D G V+ +G    G LG    G +  +
Sbjct: 4213 TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLG---DGTTSAL 4269

Query: 420  LRPRILDSLRAHHVSQISTGLYHTV 444
             RPR++ +L+   +++++ G  HT+
Sbjct: 4270 QRPRLVHALQGKKITRVACGSAHTL 4294



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 12/317 (3%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQSGQVFTCG 189
            +++CG    G LG G +   C     I F S   + +V+      HA  + Q G+VF+ G
Sbjct: 3005 LYACGEGTNGRLGLGDDYNMC-EPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWG 3063

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +      GH +    + +PRL+E+LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 3064 EGEDGKLGHGNCTT-LDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 3122

Query: 250  GHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            GHGDT  +  PK +  L     VVQ+A G   +  +++T +G VY++G G    LG G  
Sbjct: 3123 GHGDTATQMKPKLVQALSG-QRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGS 3181

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
                 P  +   R  G+ VV+V  G +  +AL   G V+TWGKG    LGHG++     P
Sbjct: 3182 DGCYTPLLVD--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 3239

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
              +  L+    V V         + DTG VY +G    G  G    G +    +P ++  
Sbjct: 3240 TLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTIVNRKPSLVHE 3296

Query: 428  LRAHHVSQISTGLYHTV 444
            L    ++++S G  H++
Sbjct: 3297 LDDTRMNRVSCGSSHSI 3313



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  P P +S++ L  +    Q+A G   + AVT +G VY
Sbjct: 3932 GAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPI----QLAGGEQTLFAVTADGKVY 3987

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            S G G+   LG G     + P  +++ +   I  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3988 STGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4047

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+ +    P+ +  L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4048 DGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4107

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               SD  LRP+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4108 ---SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4164

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4165 CKVPLKI 4171



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 7/187 (3%)

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + LA+T +G VYS+G+G    LGHG+     +P+ I+T   K I  + ++ G  +  AL 
Sbjct: 520 HYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNI--IFIACGSTYSAALS 577

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVY 398
           +SG +YTWG+G  G LGHG   D T+P  +++LK H+ V V   +   +T  +  +G V+
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVF 637

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G   +G LG   RG SD    P+I+D L   +V ++  G   +  +T RG ++ +G  
Sbjct: 638 SWGDGDYGKLG---RGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKG 694

Query: 459 ERAQLGH 465
           +  +LGH
Sbjct: 695 DAYRLGH 701



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 119/234 (50%), Gaps = 8/234 (3%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT  G V++ G+   G+LGHGD +    PK I  L E  +++ IA G +Y  A++ +G +
Sbjct: 524 LTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLE-KNIIFIACGSTYSAALSASGEL 582

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYVYTWG 349
           Y++G G+   LGHG   D   P  + T   KG  VV V+  +GD   + + +SG V++WG
Sbjct: 583 YTWGRGNYGRLGHGSNDDVTVPTLVTTL--KGHMVVHVACGSGDSQTLCVTASGIVFSWG 640

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            G  G LG G       P+ +  L     V+V    + +  L   G VY +G      LG
Sbjct: 641 DGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLG 700

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
               G  + V  P++++SLR   +  +S G  H + +T+   ++G+G N+  Q+
Sbjct: 701 ---HGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQI 751



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 14/253 (5%)

Query: 113  NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQ 168
             ++ + +G  H L +S+   V+S G    G LGHG      +S+ R           +V 
Sbjct: 4020 KKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----LSYDRPKLVEDLLGIEIVD 4075

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++   +H+A +  +G ++T G       GH D++  + RP++VEAL+      V  G   
Sbjct: 4076 IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVEALQDYKVIDVACGSGD 4134

Query: 229  TGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L  T   +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T
Sbjct: 4135 AQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG-VIKVECGSQFSVALT 4193

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +PR +     +G  ++ ++ G  H VA    G V+
Sbjct: 4194 RSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIATGSLHCVACSDKGEVF 4251

Query: 347  TWGKGYCGALGHG 359
            TWG    G LG G
Sbjct: 4252 TWGDNDEGQLGDG 4264



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 17/186 (9%)

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           +L+++GN  +  +GS + +            P+ + +F  K + ++   +  +H +AL  
Sbjct: 479 ILSLSGNVYIMYYGSETQY------------PQRMHSFSDKPVTMIASHSDGKHYLALTQ 526

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G VY+WG G  G LGHGD I    P+ + +L     + +      +  L  +G +Y +G
Sbjct: 527 DGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWG 586

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
              +G LG    G +D V  P ++ +L+ H V  ++  +G   T+ VT  G +F +GD +
Sbjct: 587 RGNYGRLG---HGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGD 643

Query: 460 RAQLGH 465
             +LG 
Sbjct: 644 YGKLGR 649



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 17/162 (10%)

Query: 306  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
            ++HDE   + +Q   R+          ++  ++ D SG +Y WG  + G LG  +     
Sbjct: 3907 QEHDE---QLLQWLNRRP---------EDWTLSWDGSGAIYGWGHNHRGQLGGLEGAKIK 3954

Query: 366  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            LP P  SL +   +Q+   ++  F +   G VY  G+   G LG    G +D V+ P +L
Sbjct: 3955 LPAPCESLSALRPIQLAGGEQTLFAVTADGKVYSTGYGAAGRLGI---GGTDSVMVPTLL 4011

Query: 426  DSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            +S++   + +++  +G  H + ++  G ++ +G+ +  +LGH
Sbjct: 4012 ESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4053



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 5/176 (2%)

Query: 122 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFV 179
           Y   L ++  +++ G    G LGHG      V  T +       VV V+  + ++    V
Sbjct: 572 YSAALSASGELYTWGRGNYGRLGHGSNDDVTVP-TLVTTLKGHMVVHVACGSGDSQTLCV 630

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
             SG VF+ GD      G R  +     P++V+ L  +   +V  G  F+  LT RG V+
Sbjct: 631 TASGIVFSWGDGDYGKLG-RGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVY 689

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           T G     +LGHG+      PK I  L +   +  ++ G +++LA+T +  VY +G
Sbjct: 690 TWGKGDAYRLGHGNEEHVRYPKLIESLRD-KKIKDLSVGGTHILALTEDQFVYGWG 744



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 18/174 (10%)

Query: 119 TGRYHTLLISNSS-VFSCGSSLCGVLGHG----PETTQCV-SFTRINFPSAAHVVQVSAS 172
           +G   TL ++ S  VFS G    G LG G     +T + V     IN      VV+V   
Sbjct: 622 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDIN------VVRVFCG 675

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
              +A +   G+V+T G   ++  GH +    +  P+L+E+L+    K ++ G      L
Sbjct: 676 GQFSAALTARGEVYTWGKGDAYRLGHGNEEH-VRYPKLIESLRDKKIKDLSVGGTHILAL 734

Query: 233 TIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           T    V+  G N +GQ+    G  +  P   S+ P     +V+ +A+GP+   A
Sbjct: 735 TEDQFVYGWGRNDYGQIDPTLGPVVSEP---SLCPTLSSKNVIGLASGPTQSFA 785


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 145/277 (52%), Gaps = 20/277 (7%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 274
           K+V  G N + FL   G V+TCGSNT GQLGH    ++P        E++G+     +V 
Sbjct: 38  KEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP--------EQIGALADQHIVH 89

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 333
           +A G S+ LA++  G ++S+G+GS+  LGH    D +  PR I+   ++ I  ++VS G+
Sbjct: 90  VACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMI--LQVSCGN 147

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            H +AL + G  +TWG+   G LG G E   +  P+ + SL+     QV A    +F L 
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS 207

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G+V+G+G    G LG  D   +D+   P  +  LR   V  IS G  HT V+T  G +
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDE--TDRQ-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 264

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
           F FG     QLGHD++   + P  +      E T +A
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIA 301



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 164/323 (50%), Gaps = 16/323 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 31  FISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP----EQIGALADQH 86

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ +G + + G+ + GQLGH  T D    P+ I  L +   ++Q++ 
Sbjct: 87  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSC 145

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + +A+  +G  +++G   +  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL--EGIPLAQVAAGGAHS 203

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG+   G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 263

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG   FG LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 264 VFTFGAGSFGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320

Query: 456 GDNERAQL--GHDTLRGCLEPTE 476
           G   R QL  GH     C  P +
Sbjct: 321 GCGARGQLGTGHTCNVKCPSPVK 343



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 151/321 (47%), Gaps = 11/321 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CGS+  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 44  GNHSIFLLEDGEVYTCGSNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 100

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    GH  T   +  PRL++ L      QV+ G      L   G   
Sbjct: 101 SDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFF 160

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 161 TWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGRNN 219

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 220 AGQLGLSDETDRQSPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGH 277

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 278 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 334

Query: 418 KVLRPRILDSLRAHHVSQIST 438
            V  P  +    A H  Q+S+
Sbjct: 335 NVKCPSPVKGHWAAHNGQLSS 355


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 161/335 (48%), Gaps = 26/335 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V+    HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACG 369

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
                 +T+ G ++T G  TH  G LGHG+ +    PK +  PLEEV  V  IA GP + 
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEV-RVASIACGPWHT 428

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT  G +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+   
Sbjct: 429 AVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESL--KGLRTVRAACGVWHTAAVVEV 486

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G  G LGHGD+  + +P  +++L  H   +V      T  
Sbjct: 487 MVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVA 546

Query: 391 LVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
           L   G V+  G   FG LG P   G    ++  R++D+    +V  I+ G +H   VT +
Sbjct: 547 LTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDA----YVEDIACGAHHVACVTLK 602

Query: 450 GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
             ++ +G     +LGH        PT   ++ ++E
Sbjct: 603 SEVYTWGKGANGRLGHGDQEDRNTPT--LVEALKE 635



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 133/286 (46%), Gaps = 22/286 (7%)

Query: 106 IVETSAGNQMQITT-GRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE  A +  ++   G YH   ++ S     +  G+   G+LGHG + +  +   R+N P
Sbjct: 354 LVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIP-KRVNGP 412

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V  ++    H A V  +GQ+FT GD +    GH D  +  + PR VE+LKG+   
Sbjct: 413 LEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHND-RQSAYSPREVESLKGLRTV 471

Query: 221 QVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
           +   G+  T  +               G + T G    G+LGHGD   R  P  +A L +
Sbjct: 472 RAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVD 531

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
             +  ++A G S  +A+T  G V++ GS     LG   Q D   P  ++  R    +V  
Sbjct: 532 -HNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEG-RLVDAYVED 588

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           ++ G  HV  +     VYTWGKG  G LGHGD+ D+  P  + +LK
Sbjct: 589 IACGAHHVACVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALK 634



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 109/237 (45%), Gaps = 21/237 (8%)

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 313
            LD P PK++     V  V  +A G  +   VT  G V+++G  S   LGHG   D   P
Sbjct: 294 NLDAPLPKALESAI-VLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHP 352

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLS 371
           + ++        VV  + G+ H  A+  SG +YTWG G    G LGHG++I   +P+ ++
Sbjct: 353 QLVEALASSTTEVV--ACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVN 410

Query: 372 -SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
             L+      +      T V+   G ++ FG   FG LG  DR        PR ++SL+ 
Sbjct: 411 GPLEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDR---QSAYSPREVESLKG 467

Query: 431 HHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
               + + G++HT  V +             G+LF +GD ++ +LGH      L PT
Sbjct: 468 LRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPT 524



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 19/279 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + V  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 325
              + V +A G  +  AVT +G +Y++G G++    LGHG       P+ +     + + 
Sbjct: 360 SSTTEV-VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEE-VR 417

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK    V+     
Sbjct: 418 VASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGV 477

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   ++ L P  + +L  H+ 
Sbjct: 478 WHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDK---EQRLVPTCVAALVDHNF 534

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            +++ G   TV +T +G +F  G +   QLG     G L
Sbjct: 535 RKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKL 573



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  V+ G +H   +   G V+TWG+   G LGHG + D + P+ + +L S     V  
Sbjct: 309 LDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVAC 368

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 442
            +     +  +G +Y +G  G  SLG    G       P R+   L    V+ I+ G +H
Sbjct: 369 GEYHGCAVTLSGDLYTWG-DGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWH 427

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T VVT  G+LF FGD     LGH+  +    P E+
Sbjct: 428 TAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREV 462



 Score = 38.5 bits (88), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 2/109 (1%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L +   VF+ GSS+ G LG  P+    +          A+V  ++   +H A V    +V
Sbjct: 547 LTTKGEVFTMGSSMFGQLGD-PQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEV 605

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           +T G  ++   GH D       P LVEALK    K +  G  FT  + +
Sbjct: 606 YTWGKGANGRLGHGD-QEDRNTPTLVEALKEKQVKSIACGATFTAAVCL 653


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 161/330 (48%), Gaps = 24/330 (7%)

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRL 210
           C+    + F     V  +S    HA  V + G+V++ G+ S    GH  D + P  +P+L
Sbjct: 299 CLVPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP--QPKL 356

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLE 267
           ++AL  +  + V  G   T  +T+ G ++T G+ T   G  GHG+ +    PK +  PLE
Sbjct: 357 IDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLE 416

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            +  V  I+ GP +   VT  G +++FG GS   LGHG++     PR +++   KG+  V
Sbjct: 417 GI-HVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESL--KGLRTV 473

Query: 328 RVSAGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           R + G  H  A+             SSG ++TWG G  G LGHGD+  + +P  ++SL  
Sbjct: 474 RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVE 533

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  L  +G VY  G   +G LG P    +D ++  R+   L  + V +
Sbjct: 534 PNFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQ---ADGMVPARVEGKLHKNFVEE 590

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           IS G YH  V+T R  ++ +G     +LGH
Sbjct: 591 ISCGAYHVAVLTSRTEVYTWGKGANGRLGH 620



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+ GHG E +  +   R+N P    HV  +S  
Sbjct: 368 VACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMP-KRLNGPLEGIHVSSISCG 426

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D  + I  PR VE+LKG+   +   G+  T  +
Sbjct: 427 PWHTAVVTSAGQLFTFGDGSFGVLGHGD-RQSISVPREVESLKGLRTVRAACGVWHTAAV 485

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G  
Sbjct: 486 VEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVEP-NFCQVACGHC 544

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 545 FTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNF-VEEISCGAYHVAVLT 602

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 603 SRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 636



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 113/244 (46%), Gaps = 31/244 (12%)

Query: 252 GDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G  +D   PK   PLE  G   V  I+ G  +   VT  G VYS+G  S   LGHG   D
Sbjct: 294 GAKMDCLVPK---PLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCD 350

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLP 367
             QP+ I       I +V  + G+ H  A+  SG +YTWG G    G  GHG+E+   +P
Sbjct: 351 VPQPKLIDALAHMNIELV--ACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMP 408

Query: 368 E----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
           +    PL  +  H++   C     T V+   G ++ FG   FG LG  DR     +  PR
Sbjct: 409 KRLNGPLEGI--HVSSISCG-PWHTAVVTSAGQLFTFGDGSFGVLGHGDR---QSISVPR 462

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGC 471
            ++SL+     + + G++HT  V +             G++F +GD ++ +LGH      
Sbjct: 463 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETR 522

Query: 472 LEPT 475
           L PT
Sbjct: 523 LVPT 526



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 18/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT +++++  +F+ G    GVLGHG    Q +S  R +        V+ +    
Sbjct: 423 ISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG--DRQSISVPREVESLKGLRTVRAACGVW 480

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D    +  P  V +L      QV
Sbjct: 481 HTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLV-PTCVASLVEPNFCQV 539

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G  FT  LT  GHV+T GS+ +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQA-DGMVPARVEGKLHKNFVEEISCGAYHV 598

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  V
Sbjct: 599 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSV 643



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 88/177 (49%), Gaps = 10/177 (5%)

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G + D L P+ ++   R  + V  +S G  H   +   G VY+WG+   G LGHG + D 
Sbjct: 294 GAKMDCLVPKPLEFAGR--LDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDV 351

Query: 365 TLPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV---L 420
             P+ + +L +H+ +++ A  +  T  +  +G +Y +G    G+  F   G  ++V   +
Sbjct: 352 PQPKLIDAL-AHMNIELVACGEYHTCAVTLSGDLYTWG---NGTFNFGLSGHGNEVSHWM 407

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             R+   L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 408 PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREV 464



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 23/200 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGHG + T+
Sbjct: 471 RTVRAACGVWHTAAVVE--------VMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETR 522

Query: 152 CV-----SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 206
            V     S    NF       QV+        +  SG V+T G +     G+   +  + 
Sbjct: 523 LVPTCVASLVEPNF------CQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMV- 575

Query: 207 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P  VE  L     ++++ G      LT R  V+T G   +G+LGHGDT DR +P  +  
Sbjct: 576 -PARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEA 634

Query: 266 LEEVGSVVQIAAGPSYMLAV 285
           L++   V  +  G ++  A+
Sbjct: 635 LKD-KQVRSVVCGINFTAAI 653



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 3/127 (2%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N  Q+  G   T+ ++ S  V++ GSS+ G LG+ P+    V            V ++S 
Sbjct: 535 NFCQVACGHCFTVALTTSGHVYTMGSSVYGQLGN-PQADGMVPARVEGKLHKNFVEEISC 593

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H A +    +V+T G  ++   GH DT+     P LVEALK    + V  G+NFT  
Sbjct: 594 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTDD-RNSPTLVEALKDKQVRSVVCGINFTAA 652

Query: 232 LTIRGHV 238
           + I   V
Sbjct: 653 ICIHKWV 659


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK---KPEQVGALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 275
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDI-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    +YS+G      LG G E+  E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSL--SGIPFAHIAAGGG 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H  AL  SG ++ WG+   G LG  DE D++ P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 453
           G V+ FG  G+G LG      +   + PR +  L  + V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  G   TGF+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKS--RKKPEQVG 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+    +V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL     +Y+WG+   G LG G E  K + P  + SL       + 
Sbjct: 137 IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  +G+++G+G   FG LG  D   +D+   P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDE--TDRS-DPALLKSLRSQKIIYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVF 289



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 162/373 (43%), Gaps = 25/373 (6%)

Query: 113 NQMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N   +  G  HT  ++ + +V++CG +  G LGH     +     ++    A  +V VS 
Sbjct: 35  NVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKKP---EQVGALDAQIIVAVSC 91

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            E H   +   GQVF+ G  +    G       I  PR +++L  +   QV  G + +  
Sbjct: 92  GEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLA 151

Query: 232 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+   ++++ G N +GQLG G +      P+ I  L  +     IAAG  +  A+T +G 
Sbjct: 152 LSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGI-PFAHIAAGGGHSFALTISGA 210

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           ++ +G      LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKI--IYICCGEDHTAALTKEGGVFTFGA 268

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           G  G LGH     +  P  +  L  ++  Q+ C R+     +  +G +Y FG  G G LG
Sbjct: 269 GGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQI-----STGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G +     P ++      H   +     + G Y         R++  GD   A   
Sbjct: 329 I---GSTSNKKSPSMVKGNWLTHEDYVRRLPEANGCYCV------KRIYSGGDQSFAH-- 377

Query: 465 HDTLRGCLEPTEI 477
           + T++ CL P + 
Sbjct: 378 YFTIQNCLPPDDF 390


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 154/320 (48%), Gaps = 17/320 (5%)

Query: 156  TRINFPSAAHVVQVSASENHAA------FVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 207
            ++I  P  + V+      N A        V   G+VF CG+  N     GH   +  + +
Sbjct: 2671 SKIKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGH---SHNVAQ 2727

Query: 208  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P+ +  L     K+V   +G      LTI G V + G    G+LGHG+ +    PK +  
Sbjct: 2728 PKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVES 2787

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L+    +  +A G S+  AVT +G +Y++GSG    LGHG+   +L+P+ ++    + + 
Sbjct: 2788 LK-CKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVV 2846

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   + D   +AL    +VY+WG G  G LG G     +LP+ + +L S   +QV    
Sbjct: 2847 QVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGA 2906

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L   G V+ +G   +  LG    G    V  P++++ L   +V Q+S G  H + 
Sbjct: 2907 QFSLALSKNGKVWTWGKGDYFRLG---HGSDSHVRWPQVVEELADKNVIQVSVGALHCIA 2963

Query: 446  VTDRGRLFGFGDNERAQLGH 465
            VTDRG ++ +GDN+  Q G+
Sbjct: 2964 VTDRGEVYAWGDNDHGQQGN 2983



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 154/337 (45%), Gaps = 9/337 (2%)

Query: 141  GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 200
            G LG G E  +  + T  +  +A   VQ+   E     +   G+V+  G  +    G   
Sbjct: 3630 GQLG-GVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGYGAGGRLGIGG 3688

Query: 201  TNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 258
            T   +  P L+E L+ V   QV   +G      LT  G V + G    G+LGHG      
Sbjct: 3689 TES-VSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCE 3747

Query: 259  TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 318
             PK I  L +   VV +A G ++   +T +G +Y++G G    LGHG+  D+L+P+ ++ 
Sbjct: 3748 RPKLIESLRD-KHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEE 3806

Query: 319  FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
                 +  V   +GD   + +   G V++WG G  G LG G       P+ + SL++   
Sbjct: 3807 LAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGV 3866

Query: 379  VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQIS 437
            ++V    + +  L   G VY +G   +  LG    G  D V RP+ +  +L+   V Q++
Sbjct: 3867 IKVECGSQFSVALTAAGVVYTWGKGDYHRLG---HGSEDHVRRPQAVQGALQGKRVIQVA 3923

Query: 438  TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             G  H V  TD G +F +GDN+  QLG  +      P
Sbjct: 3924 VGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRP 3960



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 159/342 (46%), Gaps = 17/342 (4%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSA 171
            M I  G     ++S +  VF+CG    G LG  H     Q    T ++ P     V V +
Sbjct: 2688 MNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLS-PYFIKKVAVHS 2746

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTG 230
               HA  +   G+VF+ G+      GH   N+  + RP+LVE+LK    + V  G + + 
Sbjct: 2747 GGRHALALTIDGRVFSWGEGEDGKLGH--GNKISYDRPKLVESLKCKRIRDVACGSSHSA 2804

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGN 288
             +T  G ++T GS  +G+LGHGD + +  PK +  L     VVQ+A G   +  LA+T  
Sbjct: 2805 AVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSH-ERVVQVACGSRDAQTLALTER 2863

Query: 289  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
              VYS+G G    LG G       P+ ++T   +   V++V  G +  +AL  +G V+TW
Sbjct: 2864 HWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQ--QVIQVECGAQFSLALSKNGKVWTW 2921

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            GKG    LGHG +     P+ +  L     +QV         + D G VY +G    G  
Sbjct: 2922 GKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQ 2981

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
            G  +  V+ K   P I+  L A  ++ ++ G  H+V  +  G
Sbjct: 2982 GNGNTTVNRK---PAIVRGLEA--ITNVACGSSHSVAWSSTG 3018



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 145/283 (51%), Gaps = 14/283 (4%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +  SG VF+ G+      GH  +     RP+L+E+L+      V  G 
Sbjct: 3709 VAVNSGGKHCLALTSSGDVFSWGEGDDGKLGH-GSKALCERPKLIESLRDKHVVSVACGG 3767

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIA--AGPSYM 282
              +  +T  G ++T G   +G+LGHGD+ D+  PK +   EE+   +V+ +A  +G +  
Sbjct: 3768 AHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKV---EELAGHNVLDVACGSGDAQT 3824

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            L V+ +G+V+S+G G    LG G       P+ I + +  G  V++V  G +  VAL ++
Sbjct: 3825 LCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAG--VIKVECGSQFSVALTAA 3882

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G VYTWGKG    LGHG E     P+ +  +L+    +QV           D+G V+ +G
Sbjct: 3883 GVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWG 3942

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
                G LG    G ++ + RP+++ SL+   +++++ G  HTV
Sbjct: 3943 DNDEGQLG---DGSTNAIQRPKLVASLKGKKMNRVACGSAHTV 3982



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 129/264 (48%), Gaps = 7/264 (2%)

Query: 114  QMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
            Q+ + +G  H L L S+  VFS G    G LGHG +   C     I      HVV V+  
Sbjct: 3708 QVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKAL-CERPKLIESLRDKHVVSVACG 3766

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
              H+A +  SG+++T G       GH D+   + +P+ VE L G     V  G      L
Sbjct: 3767 GAHSACITASGELYTWGKGRYGRLGHGDSEDQL-KPKKVEELAGHNVLDVACGSGDAQTL 3825

Query: 233  TIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             +   G V + G   +G+LG G +     P+ I  L+  G V+++  G  + +A+T  GV
Sbjct: 3826 CVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAG-VIKVECGSQFSVALTAAGV 3884

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            VY++G G    LGHG +    +P+A+Q    +G  V++V+ G  H VA   SG V+TWG 
Sbjct: 3885 VYTWGKGDYHRLGHGSEDHVRRPQAVQG-ALQGKRVIQVAVGSLHCVACTDSGEVFTWGD 3943

Query: 351  GYCGALGHGDEIDKTLPEPLSSLK 374
               G LG G       P+ ++SLK
Sbjct: 3944 NDEGQLGDGSTNAIQRPKLVASLK 3967



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 120/244 (49%), Gaps = 6/244 (2%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G +H  G N  GQLG  +     T      L  +  V QI  G   + A+T +G VY+ G
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPV-QIVGGEQTLFALTSDGKVYATG 3677

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+   LG G       P  I+T +   +  V V++G +H +AL SSG V++WG+G  G 
Sbjct: 3678 YGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGK 3737

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG +     P+ + SL+    V V      +  +  +G +Y +G   +G LG    G 
Sbjct: 3738 LGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLG---HGD 3794

Query: 416  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            S+  L+P+ ++ L  H+V  ++  +G   T+ V+  G ++ +GD +  +LG     GC  
Sbjct: 3795 SEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKF 3854

Query: 474  PTEI 477
            P +I
Sbjct: 3855 PQKI 3858



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 113/237 (47%), Gaps = 12/237 (5%)

Query: 233  TIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             I   V   G N   QLG   G  +  P   + I+ L+ +     IA G   +  V+ +G
Sbjct: 2649 NIECKVFVWGLNDKDQLGGLKGSKIKEPKFSEVISNLKPMN----IAGGSKSLFIVSHDG 2704

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             V++ G G+N  LG G  H+  QP+ +       I  V V +G  H +AL   G V++WG
Sbjct: 2705 KVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWG 2764

Query: 350  KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            +G  G LGHG++I    P+ + SLK      V      +  +  +G +Y +G   +G LG
Sbjct: 2765 EGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLG 2824

Query: 410  FPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLG 464
                G +   L+P+ + +L    V Q++ G     T+ +T+R  ++ +GD +  +LG
Sbjct: 2825 ---HGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLG 2878



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 7/231 (3%)

Query: 115  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            + +  G  H+  I+ S  +++ G    G LGHG    Q +   ++   +  +V+ V+   
Sbjct: 3761 VSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQ-LKPKKVEELAGHNVLDVACGS 3819

Query: 174  NHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              A    V + G V++ GD      G   ++   F P+ +++L+     +V  G  F+  
Sbjct: 3820 GDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKF-PQKIDSLQNAGVIKVECGSQFSVA 3878

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            LT  G V+T G   + +LGHG       P+++    +   V+Q+A G  + +A T +G V
Sbjct: 3879 LTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEV 3938

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            +++G      LG G  +   +P+ + +   KG  + RV+ G  H V+  +S
Sbjct: 3939 FTWGDNDEGQLGDGSTNAIQRPKLVASL--KGKKMNRVACGSAHTVSWSTS 3987


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 168/343 (48%), Gaps = 15/343 (4%)

Query: 131 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           +++  G++  G LG G  E  Q +   ++++  A  VV+V    +H  F+ + G+++ CG
Sbjct: 2   AIYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 190 DNSSFCCGHRDTNRPIFRPRL-----VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +N     GH     P  RPR+     + +L+      ++ G   +  LT  G V + GSN
Sbjct: 62  NNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSN 121

Query: 245 THGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
             GQLGH  +   +PTP+ I  +     VVQIA+G  + LA+T NG +Y++GS S   LG
Sbjct: 122 AVGQLGHDAENGRQPTPRMIKAI-GAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLG 180

Query: 304 HGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
            G   +++  P  IQ+    G+ +  ++ G  H  A+  SG ++ WGK   G LG  D  
Sbjct: 181 IGTTSEKVPMPTLIQSL--AGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 238

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            +  P  L +L+S     +      +  L + G V+  G   FG LG    G     + P
Sbjct: 239 SRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLG---HGSCSNEIVP 295

Query: 423 RILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 464
           R +  L    ++QI+ G  HT+  V  RG+++GFG     QLG
Sbjct: 296 RKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLG 338



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 148/309 (47%), Gaps = 11/309 (3%)

Query: 109 TSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-----TQCVSFTRINFPS 162
           + A   +++  G  HTL ++    +++CG++  G LGH  +T      +   F R+    
Sbjct: 33  SQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLE 92

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
              +  +S    H+  +   GQVF+ G N+    GH   N     PR+++A+      Q+
Sbjct: 93  NYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQI 152

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSY 281
            +G      LT  G ++  GSN++GQLG G T ++ P P  I  L  V  +  IA G ++
Sbjct: 153 ASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV-PIAFIACGGNH 211

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
             AV+ +G ++ +G  +   LG  + +    P  ++T R  G+  +  S GD+  V L +
Sbjct: 212 SFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYI--SCGDDFSVFLTN 269

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGF 400
            G V+T G G  G LGHG   ++ +P  +  L      Q+   +R T   V + G +YGF
Sbjct: 270 EGGVFTCGAGTFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGF 329

Query: 401 GWMGFGSLG 409
           G  G G LG
Sbjct: 330 GLGGVGQLG 338



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 140/282 (49%), Gaps = 14/282 (4%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTP--- 260
           +  PR ++  +     +V  G + T FLT  G ++ CG+N HGQLGH  DTL    P   
Sbjct: 24  VMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMS 83

Query: 261 --KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQ 317
             K +  LE    +  I+ G ++ LA+T  G V+S+GS +   LGH  E   +  PR I+
Sbjct: 84  RFKRLTSLENY-IITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIK 142

Query: 318 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSH 376
               K  HVV++++G  H +AL ++G +Y WG    G LG G   +K  +P  + SL   
Sbjct: 143 AIGAK--HVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGV 200

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
               +      +F +  +G+++G+G   FG LG  D    +    P  L +LR+  V  I
Sbjct: 201 PIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL---NSRCYPTQLRTLRSLGVRYI 257

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           S G   +V +T+ G +F  G     QLGH +    + P ++F
Sbjct: 258 SCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVF 299



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 125/245 (51%), Gaps = 5/245 (2%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  H+L ++N   VFS GS+  G LGH  E  +  +   I    A HVVQ+++ + H
Sbjct: 99  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYH 158

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              +  +G+++  G NS    G   T+  +  P L+++L GVP   +  G N +  ++  
Sbjct: 159 CLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKS 218

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G +   G NT GQLG  D   R  P  +  L  +G V  I+ G  + + +T  G V++ G
Sbjct: 219 GAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLTNEGGVFTCG 277

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 354
           +G+   LGHG   +E+ PR +  F   G  + +++ G  H +A + S G +Y +G G  G
Sbjct: 278 AGTFGQLGHGSCSNEIVPRKV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVG 335

Query: 355 ALGHG 359
            LG G
Sbjct: 336 QLGIG 340



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 12/248 (4%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           ++  G+  HG+LG G   +     P+ +    +   VV++  G S+ L +T  G +Y+ G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKM-DWSQADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 296 SGSNFCLGHG-EQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           +  +  LGH  +     +PR +  F+R    +   +  +S G  H +AL + G V++WG 
Sbjct: 62  NNDHGQLGHDLDTLPNKRPR-MSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS 120

Query: 351 GYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
              G LGH  E  +   P  + ++ +   VQ+ + +     L + G +Y +G   +G LG
Sbjct: 121 NAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLG 180

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
                 S+KV  P ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L 
Sbjct: 181 IGT--TSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 238

Query: 470 GCLEPTEI 477
               PT++
Sbjct: 239 SRCYPTQL 246



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 4/149 (2%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H+  +S S ++F  G +  G LG     ++C   T++    +  V  +S  ++ 
Sbjct: 205 IACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYP-TQLRTLRSLGVRYISCGDDF 263

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 234
           + F+   G VFTCG  +    GH   +  I  PR V  L G    Q+  G   T  F+  
Sbjct: 264 SVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV-PRKVFELMGSKITQIACGRRHTLAFVPS 322

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           RG ++  G    GQLG G   +  TP+ +
Sbjct: 323 RGKIYGFGLGGVGQLGIGMVGNHSTPQIV 351


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 153/315 (48%), Gaps = 22/315 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L+EAL     + V  G
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPQLIEALSNTNIEFVACG 375

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 376 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 434

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             V+  G +++FG G+   LGHG++     PR +++   KG+  V+ + G  H  A+   
Sbjct: 435 AVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESL--KGLRTVQAACGVWHTAAVVEV 492

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G  G LGHGD+  K +P  +S+L      QV      T  
Sbjct: 493 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTIA 552

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
              +G VY  G   +G LG P    SD  L  R+   L    V +I+ G YH  V+T + 
Sbjct: 553 RTTSGHVYTMGSPVYGQLGNPQ---SDGKLPARVEGKLSRSSVEEIACGAYHVAVLTSKT 609

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G     +LGH
Sbjct: 610 EVYTWGKGANGRLGH 624



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 134/291 (46%), Gaps = 21/291 (7%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 156
           V H   I   S  N   +  G YHT  ++ S     +  G+   G+LGHG E +  V   
Sbjct: 355 VLHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-K 413

Query: 157 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + I  PR VE+LK
Sbjct: 414 RVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGD-RKSISLPREVESLK 472

Query: 216 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 473 GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 532

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           + L E  +  Q+A G S  +A T +G VY+ GS     LG+ +   +L  R      R  
Sbjct: 533 SALVEP-NFCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPARVEGKLSRSS 591

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           +    ++ G  HV  L S   VYTWGKG  G LGHGD  DK LP  + +LK
Sbjct: 592 VE--EIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALK 640



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 27/242 (11%)

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 311
           G  +D   PK++     V  V  IA G  +   VT  G ++S+G  S   LGHG   D L
Sbjct: 298 GVKMDSLLPKALESAV-VLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVL 356

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC--GALGHGDEIDKTLPE- 368
            P+ I+      I  V  + G+ H  A+  SG +YTWG G    G LGHG+E+   +P+ 
Sbjct: 357 HPQLIEALSNTNIEFV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 414

Query: 369 ---PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
              PL  +  H++   C     T V+   G ++ FG   FG LG  DR     +  PR +
Sbjct: 415 VNGPLEGI--HVSSISCG-PWHTAVVSSAGQLFTFGDGTFGVLGHGDR---KSISLPREV 468

Query: 426 DSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLE 473
           +SL+     Q + G++HT  V +             G+LF +GD ++ +LGH      L 
Sbjct: 469 ESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 528

Query: 474 PT 475
           PT
Sbjct: 529 PT 530



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   P+ I  L 
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALS 365

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 366 NT-NIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 423

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + S+G ++T+G G  G LGHGD    +LP  + SLK    VQ     
Sbjct: 424 VSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGV 483

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 484 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVSALVEPNF 540

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            Q++ G   T+  T  G ++  G     QLG+    G L
Sbjct: 541 CQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKL 579



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT ++S++  +F+ G    GVLGHG   +  +S  R +        VQ +    
Sbjct: 427 ISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKS--ISLPREVESLKGLRTVQAACGVW 484

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 485 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVSALVEPNFCQV 543

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G + T   T  GHV+T GS  +GQLG+  + D   P  +       SV +IA G  ++
Sbjct: 544 ACGHSLTIARTTSGHVYTMGSPVYGQLGNPQS-DGKLPARVEGKLSRSSVEEIACGAYHV 602

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  +
Sbjct: 603 AVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSI 647



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 6/175 (3%)

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G + D L P+A+++     + V  ++ G +H   +   G +++WG+   G LGHG + D 
Sbjct: 298 GVKMDSLLPKALESAVV--LDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDV 355

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRP 422
             P+ + +L +     V   +  T  +  +G +Y  G G   FG LG  +  VS  V + 
Sbjct: 356 LHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWVPK- 413

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           R+   L   HVS IS G +HT VV+  G+LF FGD     LGH   +    P E+
Sbjct: 414 RVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREV 468



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 7/129 (5%)

Query: 113 NQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           N  Q+  G  H+L I+ ++   V++ GS + G LG+ P++   +        S + V ++
Sbjct: 539 NFCQVACG--HSLTIARTTSGHVYTMGSPVYGQLGN-PQSDGKLPARVEGKLSRSSVEEI 595

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           +    H A +    +V+T G  ++   GH DT+     P LVEALK    K +  G NFT
Sbjct: 596 ACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNL-PSLVEALKDKQVKSIACGTNFT 654

Query: 230 GFLTIRGHV 238
             + +   V
Sbjct: 655 AAICLHKWV 663


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 145/308 (47%), Gaps = 17/308 (5%)

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
           +G V++ G       G  DTN    RP LV+ALK     QV  G   T  L+  G V+T 
Sbjct: 6   AGLVYSWGRGEDGQLGLGDTNDQD-RPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTW 64

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           G    G+LGHGD   +  P+ +  LE    +VQ   G  +  AVT  G +Y++G G    
Sbjct: 65  GRGDDGRLGHGDNGWKYVPRIVEALEGQ-RIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD- 360
           LGHG +     P  ++  R +G  V +++ G  H V L   G VYTWG    G +GH + 
Sbjct: 124 LGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNA 183

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           +  + LP  L SL++    QV A    T  L   G ++ +G   FG LG    G+    +
Sbjct: 184 DGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLG---HGMERNQM 240

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-----------FGFGDNERAQLGHDTLR 469
            PR++++L    V  ++ G +H+  + D G L           + FG+ +  +LGH  +R
Sbjct: 241 VPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVR 300

Query: 470 GCLEPTEI 477
               PT +
Sbjct: 301 KVSVPTLV 308



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 157/326 (48%), Gaps = 16/326 (4%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V+S G    G LG G    Q      ++   +  VVQV+    H   + + G V+T G  
Sbjct: 9   VYSWGRGEDGQLGLGDTNDQDRPVL-VDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRG 67

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
                GH D N   + PR+VEAL+G    Q T G   T  +T +G ++T G   +G+LGH
Sbjct: 68  DDGRLGHGD-NGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGH 126

Query: 252 GDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQH 308
           G+    PTP  +  L + G+ V QIA G  + + +T  G VY++G   N  +GH   + H
Sbjct: 127 GNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGH 186

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
             L PR +++ + K   V +V+A   H  AL ++G ++TWG+G  G LGHG E ++ +P 
Sbjct: 187 QYL-PRMLESLQAK--TVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPR 243

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG--------WMGFGSLGFPDRGVSDKVL 420
            + +L       V      +  ++D+G +Y +G          G G  G    G   KV 
Sbjct: 244 MVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVS 303

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVV 446
            P ++  L   HV ++++   HT  +
Sbjct: 304 VPTLVAGLVKMHVVKVASYNEHTAAL 329



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 127/243 (52%), Gaps = 7/243 (2%)

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           + G V++ G    GQLG GDT D+  P  +  L+  G VVQ+A G  + + ++ +G VY+
Sbjct: 5   VAGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKG-VVQVACGSGHTVVLSEDGAVYT 63

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G G +  LGHG+   +  PR ++    +G  +V+ + G  H  A+   G +YTWG G  
Sbjct: 64  WGRGDDGRLGHGDNGWKYVPRIVEAL--EGQRIVQATCGSYHTAAVTDKGELYTWGGGMY 121

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
           G LGHG+E     P  +  L+   A   Q+    R T VL D G VY +G    G +G  
Sbjct: 122 GKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHT 181

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
           +         PR+L+SL+A  V+Q++   +HT  +T  G +F +G+ +  +LGH   R  
Sbjct: 182 N--ADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQ 239

Query: 472 LEP 474
           + P
Sbjct: 240 MVP 242



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 126/271 (46%), Gaps = 27/271 (9%)

Query: 83  LNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCG 141
           L   +  WK V R ++++E    +         Q T G YHT  +++   +++ G  + G
Sbjct: 72  LGHGDNGWKYVPRIVEALEGQRIV---------QATCGSYHTAAVTDKGELYTWGGGMYG 122

Query: 142 VLGHGPET---TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 198
            LGHG E+   T C+   +      A V Q++    H   +   G+V+T GD  +   GH
Sbjct: 123 KLGHGNESGHPTPCM--VKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGH 180

Query: 199 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 258
            + +   + PR++E+L+     QV A    T  LT  G + T G    G+LGHG   ++ 
Sbjct: 181 TNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQM 240

Query: 259 TPKSIAPL--EEVG--------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
            P+ +  L  + VG        S   + +G  Y      +G VY+FG+G +  LGHG+  
Sbjct: 241 VPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVR 300

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
               P  +    +  +HVV+V++ +EH  AL
Sbjct: 301 KVSVPTLVAGLVK--MHVVKVASYNEHTAAL 329



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 136/298 (45%), Gaps = 22/298 (7%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q+  G  HT+++S + +V++ G    G LGHG    + V    +       +VQ +   
Sbjct: 43  VQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRI-VEALEGQRIVQATCGS 101

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTG 230
            H A V   G+++T G       GH  ++  P   P +V+ L+  G    Q+  G   T 
Sbjct: 102 YHTAAVTDKGELYTWGGGMYGKLGHGNESGHPT--PCMVKHLRDEGARVTQIACGSRHTV 159

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
            LT  G V+T G   +G +GH +    +  P+ +  L+   +V Q+AA   +  A+T  G
Sbjct: 160 VLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQ-AKTVTQVAACGFHTAALTAAG 218

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            ++++G G    LGHG + +++ PR ++     G  V  V+ G  H  A+  SG +YTWG
Sbjct: 219 EIFTWGEGKFGRLGHGMERNQMVPRMVEAL--MGKRVGHVACGGFHSAAILDSGELYTWG 276

Query: 350 -----------KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
                       G  G LGHGD    ++P  ++ L     V+V +    T  L    S
Sbjct: 277 GGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAALAGASS 334


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRK---KPEQVGALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 275
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDI-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    +YS+G      LG G E+  E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSL--SGIPFAHIAAGGG 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H  AL  SG ++ WG+   G LG  DE D++ P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 453
           G V+ FG  G+G LG      +   + PR +  L  + V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  G   TGF+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKS--RKKPEQVG 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+    +V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL     +Y+WG+   G LG G E  K + P  + SL       + 
Sbjct: 137 IQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  +G+++G+G   FG LG  D   +D+   P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLNDE--TDRS-DPALLKSLRSQKIIYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVF 289



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 138/301 (45%), Gaps = 9/301 (2%)

Query: 113 NQMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N   +  G  HT  ++ + +V++CG +  G LGH     +     ++    A  +V VS 
Sbjct: 35  NVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGHDKSRKKP---EQVGALDAQIIVAVSC 91

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            E H   +   GQVF+ G  +    G       I  PR +++L  +   QV  G + +  
Sbjct: 92  GEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLA 151

Query: 232 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+   ++++ G N +GQLG G +      P+ I  L  +     IAAG  +  A+T +G 
Sbjct: 152 LSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGI-PFAHIAAGGGHSFALTISGA 210

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           ++ +G      LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G 
Sbjct: 211 IFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKI--IYICCGEDHTAALTKEGGVFTFGA 268

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           G  G LGH     +  P  +  L  ++  Q+ C R+     +  +G +Y FG  G G LG
Sbjct: 269 GGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328

Query: 410 F 410
            
Sbjct: 329 I 329



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  HTL +++   VFS G +  G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHH 148

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  + +   +++ G N     G     R    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLNDETDRSDPALLKSLRS-QKIIYICCGEDHTAALTKEGGVFTFG 267

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 354
           +G    LGH     E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSASHEVNPRKV--FELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 355 ALGHGDEIDKTLP 367
            LG G   +K  P
Sbjct: 326 QLGIGSTSNKKSP 338



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 14/228 (6%)

Query: 94  LRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQC 152
           +R  ++++  SDI        +Q+  G +H+L +S  S+++S G +  G LG G E  + 
Sbjct: 125 IRVPRNIKSLSDI------QIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKE 178

Query: 153 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLV 211
            +   I   S      ++A   H+  +  SG +F  G N     G  D T+R    P L+
Sbjct: 179 SAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRS--DPALL 236

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
           ++L+      +  G + T  LT  G V T G+  +GQLGH        P+ +   E +G+
Sbjct: 237 KSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKV--FELMGN 294

Query: 272 VV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           +V QIA G  + LA V  +G +YSFG G N  LG G   ++  P  ++
Sbjct: 295 IVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 155/321 (48%), Gaps = 22/321 (6%)

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           ++    HA  V + GQ+F+ G++S    GH   +  + +P++++AL       V  G   
Sbjct: 303 IACGSKHAVIVTKQGQIFSWGESSGGKLGH-GADADVSQPKVIDALSESNVVLVACGEFH 361

Query: 229 TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           T  +T+ G+++T G +TH  G LGHG  +    P+ +    E   +  ++ GP +  AV+
Sbjct: 362 TCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVS 421

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-------- 338
             G +++FG G+   LGHG++    +PR +++   KG+  ++VS G  H  A        
Sbjct: 422 SQGKLFTFGDGTFGALGHGDRSSTSKPREVESL--KGLRTLKVSCGIWHTAAVIDFINES 479

Query: 339 --LDSS--GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
             LD+S  G ++TWG G  G LGHGDE  + +P  +S        QV      T  L   
Sbjct: 480 DRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPAG--VCQVACAHSMTIALTVL 537

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G VY  G   +G LG P    S   L       +R  H+ QI+ G +H V ++  G ++ 
Sbjct: 538 GQVYTMGAADYGQLGSP---CSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYT 594

Query: 455 FGDNERAQLGHDTLRGCLEPT 475
           +G     QLGH  ++    PT
Sbjct: 595 WGKGINGQLGHGDIKDRHTPT 615



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 132/280 (47%), Gaps = 21/280 (7%)

Query: 110 SAGNQMQITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHV 166
           S  N + +  G +HT  ++ S ++++ G      G LGHG   +  +    I    +  +
Sbjct: 348 SESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRI 407

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS    H A V   G++FT GD +    GH D +    +PR VE+LKG+   +V+ G+
Sbjct: 408 SFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSS-TSKPREVESLKGLRTLKVSCGI 466

Query: 227 NFTGFL------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
             T  +            ++ G + T G+   GQLGHGD   R  P  ++       V Q
Sbjct: 467 WHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVS---MPAGVCQ 523

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           +A   S  +A+T  G VY+ G+     LG      +L        R    H+ +++ G  
Sbjct: 524 VACAHSMTIALTVLGQVYTMGAADYGQLGSPCSVGKLPIHTDGDIR--NCHIKQIACGSH 581

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           HVVAL S+G VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 582 HVVALSSNGDVYTWGKGINGQLGHGDIKDRHTPTLVKALK 621



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 30/282 (10%)

Query: 204 PIFR-----PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 258
           PI R     P+ ++ +  +  + +  G      +T +G + + G ++ G+LGHG   D  
Sbjct: 280 PIMRMDALLPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVS 339

Query: 259 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAI 316
            PK I  L E  +VV +A G  +  AVT +G +Y++G  ++    LGHG       PR +
Sbjct: 340 QPKVIDALSE-SNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREV 398

Query: 317 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
              + + + +  VS G  H  A+ S G ++T+G G  GALGHGD    + P  + SLK  
Sbjct: 399 -IGQIESVRISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSSTSKPREVESLKGL 457

Query: 377 LAVQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
             ++V      T  ++D            +G ++ +G    G LG  D         PR+
Sbjct: 458 RTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDE-------EPRL 510

Query: 425 LDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           + S  +    V Q++     T+ +T  G+++  G  +  QLG
Sbjct: 511 VPSCVSMPAGVCQVACAHSMTIALTVLGQVYTMGAADYGQLG 552



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 26/210 (12%)

Query: 285 VTGNGVVYSFGSG-SNFCLGHGE---------QHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           V G G V   G G SN  LG            + D L P+A+   R   +    ++ G +
Sbjct: 251 VDGPGDVLFLGEGISNLPLGGNMYDVKSSPIMRMDALLPKALD--RIAALDAQIIACGSK 308

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H V +   G +++WG+   G LGHG + D + P+ + +L     V V   +  T  +  +
Sbjct: 309 HAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVTVS 368

Query: 395 GSVYGF-------GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           G++Y +       G++G GS       VS  + R  ++  + +  +S +S G +HT  V+
Sbjct: 369 GNLYTWGDDTHNTGYLGHGS------AVSHWIPR-EVIGQIESVRISFVSCGPWHTAAVS 421

Query: 448 DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +G+LF FGD     LGH       +P E+
Sbjct: 422 SQGKLFTFGDGTFGALGHGDRSSTSKPREV 451


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 174/389 (44%), Gaps = 49/389 (12%)

Query: 117 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 176
           I  GR HTL + +  V+SCGS+  G LGH    ++     R++      + Q++  E H+
Sbjct: 129 IACGRAHTLFLVDGQVYSCGSNDQGQLGHKKHRSKP---ERVDALEPYTITQIACGETHS 185

Query: 177 AFVLQSGQVFTCGDNSSFCCG---HRDTNRP----------------------------- 204
             +  +GQVF  GDN +   G      + +P                             
Sbjct: 186 LALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMD 245

Query: 205 -IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
            + RPRLV AL G    Q+  G NF+  L+ RG V   G NT GQL   +    P P  +
Sbjct: 246 FMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLV 305

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             L  +  + Q+AAG  + LA+T NG VYS+G+     LG G+      P  ++T   + 
Sbjct: 306 KELYGI-PIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQ- 363

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-C 382
                ++ G++H V L  +G VY++G G  G LGHG   ++  P  +  L    A QV C
Sbjct: 364 -FCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLC 422

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK--VLRPRILDSLRAHHVSQISTGL 440
            R+        T  +Y FG  G G LG    GV  +  VL P ++  L A  + +I+TG 
Sbjct: 423 GRRHTIVFFPKTNKIYAFGLGGNGQLG-TGVGVEPQQHVLTPMLVRVLDATPILRIATGA 481

Query: 441 YHT---VVVTDRGRLFGFGDNERAQLGHD 466
             +    VV +R  +   G  E AQL  D
Sbjct: 482 SASHCFAVVGNRNHV---GAAESAQLPWD 507



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 144/346 (41%), Gaps = 54/346 (15%)

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVP----CKQVTAGLNF 228
           AA    +G V+  G+ +    G R TN     +  P  +EA   V        +  G   
Sbjct: 76  AAHAQLAGSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAH 135

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           T FL + G V++CGSN  GQLGH     R  P+ +  LE   ++ QIA G ++ LA+T N
Sbjct: 136 TLFL-VDGQVYSCGSNDQGQLGHKK--HRSKPERVDALEPY-TITQIACGETHSLALTSN 191

Query: 289 GVVYSFGSGSNFCLGHGEQH----------------------DEL------------QPR 314
           G V+++G      LG                           DEL            +PR
Sbjct: 192 GQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPR 251

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP--LSS 372
            ++     G  +V++  G    + L   G V+ WG    G L   +   KT+P P  +  
Sbjct: 252 LVRAL--TGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLREL--KTVPVPTLVKE 307

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L      Q+ A  R T  L   G VY +G   FG LG  D         P  L +L    
Sbjct: 308 LYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTI---PSRLKTLEHQF 364

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            + I+ G  H+VV+T+ G ++ FG   + QLGH TL+  + P  IF
Sbjct: 365 CAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIF 410


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 158/343 (46%), Gaps = 21/343 (6%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F    +V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 11  RCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRK---KPDQVGALDA 67

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 275
                V+ G   T  L  +G V + G   HGQ+G     D    P++I  L ++  +VQ+
Sbjct: 68  QTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDI-QIVQV 126

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    +YS+G      LG G E   E  PR I++    GI    ++AG  
Sbjct: 127 ACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSL--AGIPFAHIAAGGG 184

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H  AL  SG ++ WG+   G LG  DE D++ P  L SL+S   + +C  +  T  L   
Sbjct: 185 HSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKE 244

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 453
           G V+ FG  G+G LG      ++  + PR +  L    V+QI+ G  HT+  V   GR++
Sbjct: 245 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIY 301

Query: 454 GFGDNERAQLGHD---------TLRGCLEPTEIFIQEMEEDTG 487
            FG     QLG           T++G     E ++Q + E  G
Sbjct: 302 SFGLGGNGQLGTGSTSNRKSPFTVKGNWLTHEDYVQRLPEANG 344



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  G   T F+   G V+TCG N  GQLGH  +  R  P  + 
Sbjct: 6   VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS--RKKPDQVG 63

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L +  ++V ++ G ++ LA+   G V+S+G  ++  +G     D ++ PR I++     
Sbjct: 64  AL-DAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLY--D 120

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL     +Y+WG+   G LG G EI K + P  + SL       + 
Sbjct: 121 IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIA 180

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  +G+++G+G   FG LG  D   +D+   P +L SLR+  +  I  G  H
Sbjct: 181 AGGGHSFALTMSGAIFGWGRNKFGQLGLNDE--TDRS-APALLKSLRSQKIIHICCGEDH 237

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 238 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 273



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 28  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRKKP---DQVGALDAQTIVAVSCGEAHTLALN 84

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQVF+ G  +    G       I  PR +++L  +   QV  G + +  L+    +++
Sbjct: 85  DKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYS 144

Query: 241 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G  + + + P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 145 WGQNQYGQLGLGSEIKKESAPRHIKSLAGI-PFAHIAAGGGHSFALTMSGAIFGWGRNKF 203

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 204 GQLGLNDETDRSAPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 261

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+     +  +G +Y FG  G G LG
Sbjct: 262 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 133/245 (54%), Gaps = 8/245 (3%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++ CG  T+G+LG G   + PTPK +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 3080 GKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3139

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G +  LGHG +    +P+ I+T R K I    ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3140 GEGEDGKLGHGNRLTLEKPKLIETLRTKRIR--DIACGSSHSAAITSSGELYTWGLGEYG 3197

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             LGHGD   +  P+ +++L+ H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3198 RLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLG--- 3254

Query: 413  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            RG S+    P  +D L    V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3255 RGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVR 3314

Query: 473  EPTEI 477
            +PT I
Sbjct: 3315 KPTPI 3319



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 165/349 (47%), Gaps = 12/349 (3%)

Query: 130  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            S++F  G +  G LG G + ++  + T     S    +Q++  E     V   G+++  G
Sbjct: 4089 STIFGWGHNHRGQLG-GLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATG 4147

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
              +    G   T+  +  P LVE+L+ V  K+V   +G      L+  G V + G    G
Sbjct: 4148 YGAGGRLGVGGTDS-VTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4206

Query: 248  QLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
            +LGHG  D+ DRP  K I  L  +G VV IA G ++   +T  G V ++G G    LGHG
Sbjct: 4207 KLGHGNRDSYDRP--KLIESLSGIG-VVDIACGSAHSACITIQGHVLTWGKGRYGRLGHG 4263

Query: 306  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
            +  D+LQP+ ++         +   +GD   + +     V++WG G  G LG G      
Sbjct: 4264 DSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCK 4323

Query: 366  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            +P  + SL      +V    + +  L  +GSVY +G   +  LG    G +D V RP+ +
Sbjct: 4324 VPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKV 4380

Query: 426  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             +L+   +  I+TG  H V  +D G +F +GDN+  QLG  T+     P
Sbjct: 4381 AALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRP 4429



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 140/283 (49%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+E+L G+    +  G
Sbjct: 4179 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIESLSGIGVVDIACG 4236

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +TI+GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4237 SAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4296

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ V +V  G +  VAL  SG 
Sbjct: 4297 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVTKVECGSQFSVALTRSGS 4354

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG+      P+ +++L+    + +           D G V+ +G   
Sbjct: 4355 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDND 4414

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ SL+  H+ ++  G  HT+ ++
Sbjct: 4415 EGQLG---DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4454



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 207
            +++  P+ + V      + ++        V Q G+++ CG+  N     GH   N  +  
Sbjct: 3047 SKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 3103

Query: 208  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P+ V  L     K+V   +G      LT+ G V + G    G+LGHG+ L    PK I  
Sbjct: 3104 PKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIET 3163

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L     +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ +   +   + 
Sbjct: 3164 LR-TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVV 3222

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   + D   + L   G V++WG G  G LG G     ++P  +  L     +Q+    
Sbjct: 3223 QVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGA 3282

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L   G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H + 
Sbjct: 3283 QFSLALTKAGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3339

Query: 446  VTDRGRLFGFGDNERAQLG 464
            VTD G+++ +GDN+  Q G
Sbjct: 3340 VTDSGQVYAWGDNDHGQQG 3358



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 157/339 (46%), Gaps = 21/339 (6%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 168
            + I  G     ++S +  +++CG    G LG G     P   Q    ++         V 
Sbjct: 3064 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQY----VVKKVA 3119

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 227
            V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E L+    + +  G +
Sbjct: 3120 VHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIETLRTKRIRDIACGSS 3177

Query: 228  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAV 285
             +  +T  G ++T G   +G+LGHGD   +  PK +  L++   VVQ+A G   +  L +
Sbjct: 3178 HSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQD-HRVVQVACGSRDAQTLCL 3236

Query: 286  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
            T +G+V+S+G G    LG G       P   Q  R  G+ V+++  G +  +AL  +G V
Sbjct: 3237 TEDGLVFSWGDGDFGKLGRGGSEGCSIPH--QVDRLNGVGVMQIECGAQFSLALTKAGEV 3294

Query: 346  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
            +TWGKG    LGHG +     P P+  L+    + V         + D+G VY +G    
Sbjct: 3295 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3354

Query: 406  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
            G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3355 GQQGSGNTIVNKK---PSLVLGLDGIFVNRVACGSSHSV 3390



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 19/303 (6%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            V Q+  +EN    +  SG V       S      + N P         +KG+ C  V  
Sbjct: 564 QVRQIVCAENCVYILTDSGTVLYL----SHAISMTEDNYP-------AQVKGLECTIVQL 612

Query: 225 GLNFTG----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             +  G     L   G V++ GS   G+LGHGDT  +  P  IA L +   V  +  G S
Sbjct: 613 AAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALAD-RQVTGVFCGSS 671

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           Y  A+T +G +Y++G G+   LGHG   D+  P  +   +   +  V +  GD H + + 
Sbjct: 672 YSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVT 731

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
            +G  + WG G  G LG+   +  ++P  +   ++   V+V +  + +  L   G+VY +
Sbjct: 732 EAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTW 791

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G    G LG    G S+    P+++ +L    +  ++ GL H + +T  G L+G+G N+ 
Sbjct: 792 GKGHGGRLG---HGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDF 848

Query: 461 AQL 463
            Q+
Sbjct: 849 QQI 851



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 142/303 (46%), Gaps = 12/303 (3%)

Query: 150 TQCVSFTRINFPSAAH-----VVQVSA--SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 202
           +  +S T  N+P+        +VQ++A     H   +  SG V++ G       GH DT+
Sbjct: 588 SHAISMTEDNYPAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTS 647

Query: 203 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 262
                P  + AL       V  G +++  +T  G ++T G  T+G+LGHG++ D+  P  
Sbjct: 648 AKEL-PTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTL 706

Query: 263 IAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
           +  L+    V V +  G ++ L VT  G+ +++G G    LG+        P  +Q    
Sbjct: 707 VTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVP--VQVDLP 764

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           +   VV+V +G +  VAL   G VYTWGKG+ G LGHG+     +P+ + +L+    V +
Sbjct: 765 QASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDL 824

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
                    L  +G +YG+G   F  +  P+    D ++   IL +     V+ ++ G+ 
Sbjct: 825 AVGLAHCLALTASGELYGWGRNDFQQI-CPECVTRDPIITAPILTTPPTLRVAGMAAGVA 883

Query: 442 HTV 444
            ++
Sbjct: 884 QSL 886



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 234  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            +   V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +
Sbjct: 3026 VSSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKL 3082

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            Y+ G G+N  LG G  ++   P+ +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 3083 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3142

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
              G LGHG+ +    P+ + +L++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3143 EDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3202

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
            D       L+P+++ +L+ H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3203 DNCTQ---LKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSE 3259

Query: 470  GCLEPTEI 477
            GC  P ++
Sbjct: 3260 GCSIPHQV 3267



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 126/285 (44%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L S+  VFS G    G LGHG       S+ R   I   S   VV 
Sbjct: 4177 KKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIESLSGIGVVD 4232

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +   G V T G       GH D+   + +P+LVEAL G     +  G   
Sbjct: 4233 IACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGD 4291

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T
Sbjct: 4292 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VTKVECGSQFSVALT 4350

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G V+
Sbjct: 4351 RSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVF 4408

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  + SL+    V+V      T  L
Sbjct: 4409 TWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4453



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 242  GSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            G N  GQLG   G  +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+
Sbjct: 4095 GHNHRGQLGGLDGSRIKNPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGA 4150

Query: 299  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
               LG G       P  +++ +   I  V V++G +H +AL S G V++WG+G  G LGH
Sbjct: 4151 GGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4210

Query: 359  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
            G+      P+ + SL     V +      +  +   G V  +G   +G LG  D   S+ 
Sbjct: 4211 GNRDSYDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGD---SED 4267

Query: 419  VLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
             L+P+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +
Sbjct: 4268 QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMK 4327

Query: 477  I 477
            I
Sbjct: 4328 I 4328



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 7/233 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+   L S+  V+S GS   G LGHG  + + +  TRI   +   V  V    +++A +
Sbjct: 618 GRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELP-TRIAALADRQVTGVFCGSSYSAAI 676

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GH 237
             SG+++T G  +    GH ++    + P LV ALK      V  G      L +   G 
Sbjct: 677 TASGELYTWGRGTYGRLGHGNSEDK-YVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGL 735

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
               G    G+LG+   +    P  +  L +   VV++ +G  + +A+T  G VY++G G
Sbjct: 736 AFAWGDGDFGKLGNESCVGTSVPVQV-DLPQASCVVKVFSGSQFSVALTREGTVYTWGKG 794

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
               LGHG       P+ +Q    +G  +V ++ G  H +AL +SG +Y WG+
Sbjct: 795 HGGRLGHGNSEHSPVPKMVQAL--EGKKIVDLAVGLAHCLALTASGELYGWGR 845



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 5/145 (3%)

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           HV+AL SSG VY+WG G  G LGHGD   K LP  +++L       V      +  +  +
Sbjct: 620 HVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITAS 679

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRL 452
           G +Y +G   +G LG    G S+    P ++ +L+AH V  ++ G    H++ VT+ G  
Sbjct: 680 GELYTWGRGTYGRLG---HGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLA 736

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEI 477
           F +GD +  +LG+++  G   P ++
Sbjct: 737 FAWGDGDFGKLGNESCVGTSVPVQV 761


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 12/304 (3%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VT 223
           V QV         V   G+V+ CG+++S   G       +   RL + L   P K+  V 
Sbjct: 465 VTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSV--SRLTQVLFPQPIKKLAVH 522

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
           +G      LT  GHV++ G    G+LGHG   D  TP+ I    E   +  I+ G S+  
Sbjct: 523 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPE-KCIRDISCGSSHSA 581

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDS 341
           A+  +G +Y++G G    LGHG  H  L+P+ +Q     G  VV+V+ G  D   + L  
Sbjct: 582 AIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQAL--SGQQVVQVACGSRDAQTLCLTQ 639

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G VY+WG G  G LG G      +P+P+  L     V++    + +  L   G V+ +G
Sbjct: 640 DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 699

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
              +  LG    G    V RP++++ LR H V  ++ G  H + VT+ G++F +GDN+  
Sbjct: 700 KGDYFRLG---HGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHG 756

Query: 462 QLGH 465
           Q G+
Sbjct: 757 QQGN 760



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 154/321 (47%), Gaps = 16/321 (4%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFVLQSGQVFTCG 189
            VF+ G    G LG G   +  +  T I      H+ QVS  A   H   +   G+V++ G
Sbjct: 1461 VFATGYGAGGRLGIGSNESVAIP-TLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1519

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +      GH + +  +  PR++E+L+G    +V  G + +  +   G ++T G   +G+L
Sbjct: 1520 EGVDGKLGHGNRSS-LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRL 1578

Query: 250  GHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVT----GNGVVYSFGSGSNFCLG 303
            GH D+ D+  PK +  L++   VV +A G   +  L +T    G+ VV+S+G G    LG
Sbjct: 1579 GHEDSEDQLKPKLVNALKD-NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG 1637

Query: 304  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
             G       P  I T    G H+  V+ G +  +AL  +G VYTWGKG    LGHG +  
Sbjct: 1638 RGGSDGCKVPAIIDTLM--GKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEH 1695

Query: 364  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
               P+ + SL+    V+V          VD G VY +G    G +G    G +     PR
Sbjct: 1696 VRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG---DGTTQATQIPR 1752

Query: 424  ILDSLRAHHVSQISTGLYHTV 444
            ++ +L+ HH+S +S G  HTV
Sbjct: 1753 LVAALQGHHISHVSCGSAHTV 1773



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 26/361 (7%)

Query: 127  ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP----SAAHVVQVSASENHAAFVLQS 182
            + + S+F  G +  G LG GPE  +     +I  P    +A   +Q+   E     V   
Sbjct: 1404 VGSGSIFGWGHNHRGQLG-GPEGAK----VKIPIPCPSLAALKPIQLVGGEQTLFTVTGE 1458

Query: 183  GQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 237
            G+VF  G    +  G R    +N  +  P L+E+++ V   QV+  AG      L+  G 
Sbjct: 1459 GKVFATG----YGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1514

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V++ G    G+LGHG+      P+ I  L     +V++A G S+  A+   G +Y++G G
Sbjct: 1515 VYSWGEGVDGKLGHGNRSSLDHPRIIESLRG-DLIVKVATGGSHSAAINATGGLYTWGKG 1573

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----SGYVYTWGKGYC 353
                LGH +  D+L+P+ +   +   +  V    GD   + +      S  V++WG G  
Sbjct: 1574 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDY 1633

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            G LG G      +P  + +L       V    + +  L   G VY +G   +  LG    
Sbjct: 1634 GKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLG---H 1690

Query: 414  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            G  + V RP++++SLR   V ++S G  H +   D G ++ +GDN+  Q+G  T +    
Sbjct: 1691 GSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQI 1750

Query: 474  P 474
            P
Sbjct: 1751 P 1751



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 9/319 (2%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V++CG S  G LG GP T      T++ FP     + V +   HA  +   G V++ GD 
Sbjct: 484 VYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDG 543

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
                GH  +      PR +E       + ++ G + +  +   G ++T G   +G+LGH
Sbjct: 544 EEGKLGH-GSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGH 602

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G+      PK +  L     VVQ+A G   +  L +T +G+VYS+G G    LG G    
Sbjct: 603 GNNHTLLKPKPVQALSG-QQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDG 661

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
              P+ ++  R  G  VV++  G +  +AL   G V+TWGKG    LGHG +     P+ 
Sbjct: 662 CCVPKPVE--RLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 719

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           +  L+ H  V V         + + G V+ +G    G  G     V+ K ++ + L+ ++
Sbjct: 720 VEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVK 779

Query: 430 AHHVSQISTGLYHTVVVTD 448
              +++++ G  H++   D
Sbjct: 780 ---ITKLACGSSHSIAFAD 795



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 16/251 (6%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G +   G N  GQLG   G  +  P P  S+A L+ +    Q+  G   +  VTG G V+
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPI----QLVGGEQTLFTVTGEGKVF 1462

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  I++ +   I  V V+AG +H++AL + G VY+WG+G 
Sbjct: 1463 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGV 1522

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+  L V+V      +  +  TG +Y +G   +G LG  D
Sbjct: 1523 DGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED 1582

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD----RGRLFGFGDNERAQLGHD 466
               S+  L+P+++++L+ + V  ++   G   T+ +T+       ++ +GD +  +LG  
Sbjct: 1583 ---SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRG 1639

Query: 467  TLRGCLEPTEI 477
               GC  P  I
Sbjct: 1640 GSDGCKVPAII 1650



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 129/272 (47%), Gaps = 16/272 (5%)

Query: 114  QMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSA 171
            Q+ +  G  H L +SN   V+S G  + G LGHG  ++  +   R I       +V+V+ 
Sbjct: 1496 QVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVAT 1553

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              +H+A +  +G ++T G       GH D+   + +P+LV ALK      V  G      
Sbjct: 1554 GGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNALKDNLVVDVACGNGDAQT 1612

Query: 232  LTI------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 284
            L I         V + G   +G+LG G +     P  I  L  +G  +  +A G  + LA
Sbjct: 1613 LCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL--MGKHITHVACGSQFSLA 1670

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            ++  G VY++G G  + LGHG      +P+ I++ R  G+ VV VS G  H +A   +G 
Sbjct: 1671 LSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR--GMKVVEVSVGSLHCIAAVDNGD 1728

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
            VYTWG    G +G G      +P  +++L+ H
Sbjct: 1729 VYTWGDNDEGQIGDGTTQATQIPRLVAALQGH 1760



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 11/244 (4%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+   L  +  V+S G    G LGHG             FP    +  +S   +H+A +
Sbjct: 525 GRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAI 583

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 237
             SG ++T G       GH + N  + +P+ V+AL G    QV  G     T  LT  G 
Sbjct: 584 GSSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL 642

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFG 295
           V++ G    G+LG G +     PK   P+E +    VV+I  G  + LA++  G+V+++G
Sbjct: 643 VYSWGDGDFGKLGRGGSDGCCVPK---PVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 699

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G  F LGHG      +P+ ++  R     VV V+ G  H +A+   G V+ WG    G 
Sbjct: 700 KGDYFRLGHGSDQHVRRPQVVEGLREH--KVVDVAVGALHCLAVTEGGQVFAWGDNDHGQ 757

Query: 356 LGHG 359
            G+G
Sbjct: 758 QGNG 761



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 7/242 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V   G N   QLG        TP +   L+ +  V Q+  G   + AVT  G VY+ G  
Sbjct: 432 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRL-KVTQVIGGSKSLFAVTMGGKVYACGES 490

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
           ++  LG G     +  R  Q    + I  + V +G  H +AL   G+VY+WG G  G LG
Sbjct: 491 TSGRLGLGPVTGSVS-RLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLG 549

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           HG   D   P  + +        +      +  +  +G++Y +G   +G LG    G + 
Sbjct: 550 HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLG---HGNNH 606

Query: 418 KVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
            +L+P+ + +L    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  P 
Sbjct: 607 TLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPK 666

Query: 476 EI 477
            +
Sbjct: 667 PV 668



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 69/135 (51%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG ++ WG  + G LG  +     +P P  SL +   +Q+   ++  F + 
Sbjct: 1397 DDWTLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVT 1456

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G V+  G+   G LG    G ++ V  P +++S++  H++Q+S   G  H + +++ G
Sbjct: 1457 GEGKVFATGYGAGGRLGI---GSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEG 1513

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+    +LGH
Sbjct: 1514 EVYSWGEGVDGKLGH 1528



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 13/241 (5%)

Query: 106  IVETSAGNQM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 163
            I+E+  G+ + ++ TG  H+  I+ +  +++ G    G LGH     Q +    +N    
Sbjct: 1539 IIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQ-LKPKLVNALKD 1597

Query: 164  AHVVQVSASENHAAFVL------QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
              VV V+     A  +        S  V++ GD      G R  +     P +++ L G 
Sbjct: 1598 NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG-RGGSDGCKVPAIIDTLMGK 1656

Query: 218  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
                V  G  F+  L+  G V+T G   + +LGHG       PK I  L  +  VV+++ 
Sbjct: 1657 HITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGM-KVVEVSV 1715

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
            G  + +A   NG VY++G      +G G       PR +     +G H+  VS G  H V
Sbjct: 1716 GSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAAL--QGHHISHVSCGSAHTV 1773

Query: 338  A 338
            A
Sbjct: 1774 A 1774


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 455
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLG 409
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 13/279 (4%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAV---QVCARKRK 387
             G LG G   +   P P   +K H A    Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWAAHSGQLSARADR 358


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 155/330 (46%), Gaps = 23/330 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  +S    HA  V + G+ F+ G+ +    GH      +  P+L++  KG+  + +  G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGH-GAETDVSHPKLIKNFKGMNVELIACG 368

Query: 226 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              +  +T  G ++T G  + + G LGH        PK +  L E   V  ++ GP +  
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTA 428

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA----- 338
            +T  G +++FG G+   LGHG++   + PR ++TF   G+  ++V+ G  H  A     
Sbjct: 429 LITSAGRLFTFGDGTFGALGHGDRSGCITPREVETF--NGLKTLKVACGVWHTAAVVELM 486

Query: 339 --LDS------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
             LDS      SG ++TWG G  G LGHGD   +  P+ +++L      +V      T  
Sbjct: 487 SGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVA 546

Query: 391 LVDTGSVYGFGWMGFGSLGFP-DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
           L  TG VY  G   +G LG P   G+S   +   ++DS     V +IS G +H  V+T R
Sbjct: 547 LTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDST----VEEISCGSHHVAVLTSR 602

Query: 450 GRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
             ++ +G  E  QLGH        PT + I
Sbjct: 603 TEVYTWGKGENGQLGHGDCENKCTPTLVDI 632



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 120/284 (42%), Gaps = 20/284 (7%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 156
           V H   I      N   I  G YH+  +++S     +  G+   G+LGH  E +  +   
Sbjct: 348 VSHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKK 407

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
                    V  VS    H A +  +G++FT GD +    GH D +  I  PR VE   G
Sbjct: 408 VCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCI-TPREVETFNG 466

Query: 217 VPCKQVTAGLNFTGFL-------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           +   +V  G+  T  +                G + T G    G+LGHGD   R  P+ I
Sbjct: 467 LKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCI 526

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             L +  S  ++A   +  +A+T  G VY+ GS     LG     + + P  ++ +    
Sbjct: 527 TALVD-KSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLG-CPLANGMSPICVEDYLVDS 584

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             V  +S G  HV  L S   VYTWGKG  G LGHGD  +K  P
Sbjct: 585 T-VEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTP 627



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 33/252 (13%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G +HT LI+++  +F+ G    G LGHG + + C++   +   +    ++V+    H
Sbjct: 420 VSCGPWHTALITSAGRLFTFGDGTFGALGHG-DRSGCITPREVETFNGLKTLKVACGVWH 478

Query: 176 AAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
            A V++             SG +FT GD      GH D N+P   P+ + AL      +V
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD-NKPRLAPQCITALVDKSFSEV 537

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEV---GSVVQIAA 277
                 T  LT  G V+T GSN +GQLG       P    ++P+  E+     +V +I+ 
Sbjct: 538 ACSYAMTVALTTTGRVYTMGSNVYGQLGC------PLANGMSPICVEDYLVDSTVEEISC 591

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  ++  +T    VY++G G N  LGHG+  ++  P  +   R K   V R+  G     
Sbjct: 592 GSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDK--QVKRIVCGSNFSA 649

Query: 338 ALDSSGYVYTWG 349
           A+     V+ W 
Sbjct: 650 AI----CVHNWA 657


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 12/304 (3%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VT 223
           V QV         V   G+V+ CG+++S   G       +   RL + L   P K+  V 
Sbjct: 464 VTQVIGGSKSLFAVTMGGKVYACGESTSGRLGLGPVTGSV--SRLTQVLFPQPIKKLAVH 521

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
           +G      LT  GHV++ G    G+LGHG   D  TP+ I    E   +  I+ G S+  
Sbjct: 522 SGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPE-KCIRDISCGSSHSA 580

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDS 341
           A+  +G +Y++G G    LGHG  H  L+P+ +Q     G  VV+V+ G  D   + L  
Sbjct: 581 AIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQAL--SGQQVVQVACGSRDAQTLCLTQ 638

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G VY+WG G  G LG G      +P+P+  L     V++    + +  L   G V+ +G
Sbjct: 639 DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 698

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
              +  LG    G    V RP++++ LR H V  ++ G  H + VT+ G++F +GDN+  
Sbjct: 699 KGDYFRLG---HGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHG 755

Query: 462 QLGH 465
           Q G+
Sbjct: 756 QQGN 759



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 154/321 (47%), Gaps = 16/321 (4%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAAFVLQSGQVFTCG 189
            VF+ G    G LG G   +  +  T I      H+ QVS  A   H   +   G+V++ G
Sbjct: 1460 VFATGYGAGGRLGIGSNESVAIP-TLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWG 1518

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +      GH + +  +  PR++E+L+G    +V  G + +  +   G ++T G   +G+L
Sbjct: 1519 EGVDGKLGHGNRSS-LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRL 1577

Query: 250  GHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVT----GNGVVYSFGSGSNFCLG 303
            GH D+ D+  PK +  L++   VV +A G   +  L +T    G+ VV+S+G G    LG
Sbjct: 1578 GHEDSEDQLKPKLVNALKD-NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG 1636

Query: 304  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
             G       P  I T    G H+  V+ G +  +AL  +G VYTWGKG    LGHG +  
Sbjct: 1637 RGGSDGCKVPAIIDTLM--GKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEH 1694

Query: 364  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
               P+ + SL+    V+V          VD G VY +G    G +G    G +     PR
Sbjct: 1695 VRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIG---DGTTQATQIPR 1751

Query: 424  ILDSLRAHHVSQISTGLYHTV 444
            ++ +L+ HH+S +S G  HTV
Sbjct: 1752 LVAALQGHHISHVSCGSAHTV 1772



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 163/361 (45%), Gaps = 26/361 (7%)

Query: 127  ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP----SAAHVVQVSASENHAAFVLQS 182
            + + S+F  G +  G LG GPE  +     +I  P    +A   +Q+   E     V   
Sbjct: 1403 VGSGSIFGWGHNHRGQLG-GPEGAK----VKIPIPCPSLAALKPIQLVGGEQTLFTVTGE 1457

Query: 183  GQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 237
            G+VF  G    +  G R    +N  +  P L+E+++ V   QV+  AG      L+  G 
Sbjct: 1458 GKVFATG----YGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1513

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V++ G    G+LGHG+      P+ I  L     +V++A G S+  A+   G +Y++G G
Sbjct: 1514 VYSWGEGVDGKLGHGNRSSLDHPRIIESLRG-DLIVKVATGGSHSAAINATGGLYTWGKG 1572

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----SGYVYTWGKGYC 353
                LGH +  D+L+P+ +   +   +  V    GD   + +      S  V++WG G  
Sbjct: 1573 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDY 1632

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            G LG G      +P  + +L       V    + +  L   G VY +G   +  LG    
Sbjct: 1633 GKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLG---H 1689

Query: 414  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            G  + V RP++++SLR   V ++S G  H +   D G ++ +GDN+  Q+G  T +    
Sbjct: 1690 GSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQI 1749

Query: 474  P 474
            P
Sbjct: 1750 P 1750



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 9/319 (2%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V++CG S  G LG GP T      T++ FP     + V +   HA  +   G V++ GD 
Sbjct: 483 VYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDG 542

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
                GH  +      PR +E       + ++ G + +  +   G ++T G   +G+LGH
Sbjct: 543 EEGKLGH-GSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGH 601

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G+      PK +  L     VVQ+A G   +  L +T +G+VYS+G G    LG G    
Sbjct: 602 GNNHTLLKPKPVQALSG-QQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDG 660

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
              P+ ++  R  G  VV++  G +  +AL   G V+TWGKG    LGHG +     P+ 
Sbjct: 661 CCVPKPVE--RLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 718

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           +  L+ H  V V         + + G V+ +G    G  G     V+ K ++ + L+ ++
Sbjct: 719 VEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVK 778

Query: 430 AHHVSQISTGLYHTVVVTD 448
              +++++ G  H++   D
Sbjct: 779 ---ITKLACGSSHSIAFAD 794



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 16/251 (6%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G +   G N  GQLG   G  +  P P  S+A L+ +    Q+  G   +  VTG G V+
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPI----QLVGGEQTLFTVTGEGKVF 1461

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  I++ +   I  V V+AG +H++AL + G VY+WG+G 
Sbjct: 1462 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGV 1521

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+  L V+V      +  +  TG +Y +G   +G LG  D
Sbjct: 1522 DGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED 1581

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD----RGRLFGFGDNERAQLGHD 466
               S+  L+P+++++L+ + V  ++   G   T+ +T+       ++ +GD +  +LG  
Sbjct: 1582 ---SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRG 1638

Query: 467  TLRGCLEPTEI 477
               GC  P  I
Sbjct: 1639 GSDGCKVPAII 1649



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 129/272 (47%), Gaps = 16/272 (5%)

Query: 114  QMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSA 171
            Q+ +  G  H L +SN   V+S G  + G LGHG  ++  +   R I       +V+V+ 
Sbjct: 1495 QVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSS--LDHPRIIESLRGDLIVKVAT 1552

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              +H+A +  +G ++T G       GH D+   + +P+LV ALK      V  G      
Sbjct: 1553 GGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQL-KPKLVNALKDNLVVDVACGNGDAQT 1611

Query: 232  LTI------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 284
            L I         V + G   +G+LG G +     P  I  L  +G  +  +A G  + LA
Sbjct: 1612 LCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL--MGKHITHVACGSQFSLA 1669

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            ++  G VY++G G  + LGHG      +P+ I++ R  G+ VV VS G  H +A   +G 
Sbjct: 1670 LSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLR--GMKVVEVSVGSLHCIAAVDNGD 1727

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
            VYTWG    G +G G      +P  +++L+ H
Sbjct: 1728 VYTWGDNDEGQIGDGTTQATQIPRLVAALQGH 1759



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 11/244 (4%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+   L  +  V+S G    G LGHG             FP    +  +S   +H+A +
Sbjct: 524 GRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAI 582

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 237
             SG ++T G       GH + N  + +P+ V+AL G    QV  G     T  LT  G 
Sbjct: 583 GSSGTLYTWGHGMYGRLGHGN-NHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGL 641

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFG 295
           V++ G    G+LG G +     PK   P+E +    VV+I  G  + LA++  G+V+++G
Sbjct: 642 VYSWGDGDFGKLGRGGSDGCCVPK---PVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 698

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G  F LGHG      +P+ ++  R     VV V+ G  H +A+   G V+ WG    G 
Sbjct: 699 KGDYFRLGHGSDQHVRRPQVVEGLREH--KVVDVAVGALHCLAVTEGGQVFAWGDNDHGQ 756

Query: 356 LGHG 359
            G+G
Sbjct: 757 QGNG 760



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 7/242 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V   G N   QLG        TP +   L+ +  V Q+  G   + AVT  G VY+ G  
Sbjct: 431 VFVWGLNDKDQLGGLKGSKHKTPVASKDLQRL-KVTQVIGGSKSLFAVTMGGKVYACGES 489

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
           ++  LG G     +  R  Q    + I  + V +G  H +AL   G+VY+WG G  G LG
Sbjct: 490 TSGRLGLGPVTGSVS-RLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGKLG 548

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           HG   D   P  + +        +      +  +  +G++Y +G   +G LG    G + 
Sbjct: 549 HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLG---HGNNH 605

Query: 418 KVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
            +L+P+ + +L    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  P 
Sbjct: 606 TLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGSDGCCVPK 665

Query: 476 EI 477
            +
Sbjct: 666 PV 667



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 69/135 (51%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG ++ WG  + G LG  +     +P P  SL +   +Q+   ++  F + 
Sbjct: 1396 DDWTLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVT 1455

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G V+  G+   G LG    G ++ V  P +++S++  H++Q+S   G  H + +++ G
Sbjct: 1456 GEGKVFATGYGAGGRLGI---GSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEG 1512

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+    +LGH
Sbjct: 1513 EVYSWGEGVDGKLGH 1527



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 13/241 (5%)

Query: 106  IVETSAGNQM-QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 163
            I+E+  G+ + ++ TG  H+  I+ +  +++ G    G LGH     Q +    +N    
Sbjct: 1538 IIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQ-LKPKLVNALKD 1596

Query: 164  AHVVQVSASENHAAFVL------QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
              VV V+     A  +        S  V++ GD      G R  +     P +++ L G 
Sbjct: 1597 NLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLG-RGGSDGCKVPAIIDTLMGK 1655

Query: 218  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
                V  G  F+  L+  G V+T G   + +LGHG       PK I  L  +  VV+++ 
Sbjct: 1656 HITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGM-KVVEVSV 1714

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
            G  + +A   NG VY++G      +G G       PR +     +G H+  VS G  H V
Sbjct: 1715 GSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAAL--QGHHISHVSCGSAHTV 1772

Query: 338  A 338
            A
Sbjct: 1773 A 1773


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 25/360 (6%)

Query: 126 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+ CG N     GH   + P  RP L+  L+     Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 299 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG  DE +++ P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 140/313 (44%), Gaps = 15/313 (4%)

Query: 104 SDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 162
           S I  T      Q+  G  HTL ++ +  V++CGS+    LGH   T + +    +    
Sbjct: 32  SQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ--- 88

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
              ++Q+     H+  +   GQV + GDN     GH      +  P++V  L      Q+
Sbjct: 89  DYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQI 148

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGP 279
             G N +  LT  G +++ GSN +GQLG     D      P  +  L  +  +  IA G 
Sbjct: 149 ACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGG 207

Query: 280 SYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           ++   ++ +G V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V
Sbjct: 208 NHSFLISKSGAV--FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSV 263

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GS 396
            L + G V+T G G  G LGHG   ++ LP  +  L      QV    R T  LV + G 
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGR 323

Query: 397 VYGFGWMGFGSLG 409
           VY FG    G LG
Sbjct: 324 VYAFGLGSSGQLG 336



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 171
           +QI  G  H+L +S+   V S G + CG LGH    E  Q     R        VVQ++ 
Sbjct: 93  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKT--VVQIAC 150

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGL 226
             NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G 
Sbjct: 151 GNNHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 207

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           N +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T
Sbjct: 208 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLT 266

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 345
             G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G V
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 324

Query: 346 YTWGKGYCGALGHGDEIDKTLPE 368
           Y +G G  G LG        LP+
Sbjct: 325 YAFGLGSSGQLGTRSTKSLMLPQ 347



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 8/244 (3%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           GS     LGH    D    R +     +   ++++  G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGH----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 355 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LGH  D+    LP+ +  L +   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY 240

Query: 474 PTEI 477
           PT++
Sbjct: 241 PTQL 244



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 171
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 288
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAI 316
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 171/362 (47%), Gaps = 29/362 (8%)

Query: 126 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + S   ++  GS+  G LG G  E  Q ++  +I +     V QVS    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGK 60

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+ CG N     GH   + P  RP+L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 299 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           LG  DE ++  P  L +L++ L V+   C  +   F L + G V+  G   +G LG    
Sbjct: 230 LGLNDETNRAYPTQLKTLRT-LGVRFAACGDEFSVF-LTNEGGVFTCGAGAYGQLG---H 284

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCL 472
           G S   + PR++  L    ++Q++ G  HT+  V  RG+++ FG     QLG  + +  +
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLM 344

Query: 473 EP 474
            P
Sbjct: 345 LP 346



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 136/301 (45%), Gaps = 15/301 (4%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q++ G  HTL ++ +  V++CGS+    LGH   T +      +       ++Q+S    
Sbjct: 44  QVSCGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQ---DYVIIQISCGSR 100

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 292 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             FG G N C  LG  ++ +   P  ++T R  G+     + GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--AACGDEFSVFLTNEGGVFTCG 275

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 408
            G  G LGHG   ++ LP  +  L      QV    R T   V + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQL 335

Query: 409 G 409
           G
Sbjct: 336 G 336



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 8/244 (3%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            ++  GS +HGQLG G   D    TP+ I P     +V Q++ G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQI-PWTPDTAVQQVSCGHRHTLFLTATGKVYAC 64

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           GS     LGH       +P+ I   +   I  +++S G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGHDLPTK--RPQLIPELQDYVI--IQISCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 355 ALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LGH  E +   LP+ +  L S   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY 240

Query: 474 PTEI 477
           PT++
Sbjct: 241 PTQL 244



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 15/262 (5%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI+ G  H+L +S+   V S G + CG LGH  E         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 228
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA-GPSYMLAVTG 287
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G  V+ AA G  + + +T 
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG--VRFAACGDEFSVFLTN 267

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVY 346
            G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +A + S G VY
Sbjct: 268 EGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLAFVPSRGKVY 325

Query: 347 TWGKGYCGALGHGDEIDKTLPE 368
            +G G  G LG        LP+
Sbjct: 326 AFGLGSSGQLGTRSTKSLMLPQ 347



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 10/208 (4%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 171
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  +    G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFAACGDEFSV 263

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 288
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLAFVPSR 321

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAI 316
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GKVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 455
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 168/360 (46%), Gaps = 25/360 (6%)

Query: 126 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+ CG N     GH   + P  RP L+  L+     Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 299 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG  DE +++ P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 140/313 (44%), Gaps = 15/313 (4%)

Query: 104 SDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 162
           S I  T      Q+  G  HTL ++ +  V++CGS+    LGH   T + +    +    
Sbjct: 32  SQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLLIPELQ--- 88

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
              ++Q+     H+  +   GQV + GDN     GH      +  P++V  L      Q+
Sbjct: 89  DYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQI 148

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGP 279
             G N +  LT  G +++ GSN +GQLG     D      P  +  L  +  +  IA G 
Sbjct: 149 ACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGG 207

Query: 280 SYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           ++   ++ +G V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V
Sbjct: 208 NHSFLISKSGAV--FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEFSV 263

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GS 396
            L + G V+T G G  G LGHG   ++ LP  +  L      QV    R T  LV + G 
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGR 323

Query: 397 VYGFGWMGFGSLG 409
           VY FG    G LG
Sbjct: 324 VYAFGLGSSGQLG 336



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 171
           +QI  G  H+L +S+   V S G + CG LGH    E  Q     R        VVQ++ 
Sbjct: 93  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKT--VVQIAC 150

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGL 226
             NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G 
Sbjct: 151 GNNHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 207

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           N +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T
Sbjct: 208 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLT 266

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 345
             G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G V
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 324

Query: 346 YTWGKGYCGALGHGDEIDKTLPE 368
           Y +G G  G LG        LP+
Sbjct: 325 YAFGLGSSGQLGTRSTKSLMLPQ 347



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 8/244 (3%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           GS     LGH    D    R +     +   ++++  G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGH----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 355 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LGH  D+    LP+ +  L +   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY 240

Query: 474 PTEI 477
           PT++
Sbjct: 241 PTQL 244



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 171
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 288
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAI 316
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 158/345 (45%), Gaps = 25/345 (7%)

Query: 143 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 202
           +G G E    VS   +       V QV     HAA +   G++FT G       GH +  
Sbjct: 250 VGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGN-R 308

Query: 203 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 262
             +  PR +EAL+G+PC QV  G  +T  +T  G ++T G+  +G+LG GD  DR TP  
Sbjct: 309 EGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSR 368

Query: 263 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           +  L     V ++ AG  +   +T  G VY+F  G +   GHG+  D L PR I TF   
Sbjct: 369 VEGLHS--KVKEVYAGSVHSCVLTREGTVYAF--GKHEYTGHGDHEDVLDPRLIPTFSGG 424

Query: 323 GIHVVR---VSAGDEHVVALDSSGYVYTWGKGYCGALGHGD--------EIDKTLPEP-- 369
              +VR   V  G  H +AL   G VY WG      LG G+        E    LP P  
Sbjct: 425 SGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQL 484

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPR---- 423
           + SL     V+V A    +  L   G +Y  G  + G   LG P     ++   P     
Sbjct: 485 VESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADF 544

Query: 424 -ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
            ++D L+   + QI+ G  H+V V + G ++ FG  ++ QLGH++
Sbjct: 545 CLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHES 589



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 22/199 (11%)

Query: 162 SAAHVVQVSASEN--HAAFVLQSGQVFTCGDN--------SSFCCGHRDTNRPIF--RPR 209
           S A V Q+S      H   +   GQV+  G N        +SF    R+     F   P+
Sbjct: 425 SGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTV-PRNMEGAYFLPSPQ 483

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-- 267
           LVE+L G+   +V AG   +  LT+ G ++ CG N  GQLG G     P  +   P +  
Sbjct: 484 LVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQAD 543

Query: 268 -------EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
                  +   + QIA G  + +AV  NG V+SFG+G    LGH     E  PR +Q  +
Sbjct: 544 FCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALK 603

Query: 321 RKGIHVVRVSAGDEHVVAL 339
                ++ V+ G+   + L
Sbjct: 604 STRREIMHVACGNNCTLVL 622



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 107/236 (45%), Gaps = 29/236 (12%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---VPCK 220
           + V +V A   H+  + + G V+  G +     GH D +  +  PRL+    G      +
Sbjct: 374 SKVKEVYAGSVHSCVLTREGTVYAFGKHEY--TGHGD-HEDVLDPRLIPTFSGGSGALVR 430

Query: 221 QVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGD--TLDR--------PTPKSIAPLEE 268
           Q++ G     T  LT +G V+  G N   QLG G+  T+ R        P+P+ +  L  
Sbjct: 431 QISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESL-- 488

Query: 269 VG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-------- 319
           VG ++V++ AG  +  A+T +G +Y  G      LG G      Q      F        
Sbjct: 489 VGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLID 548

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           R + + + +++ G EH VA+  +G V+++G G  G LGH     +  P  + +LKS
Sbjct: 549 RLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKS 604



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 27/202 (13%)

Query: 114 QMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PS--------A 163
           Q+ +  G YHT+ L     V++ G +    LG G   T   +     F PS         
Sbjct: 431 QISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVESLVG 490

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR------------LV 211
            ++V+V A   H+A +   GQ++ CG N     G      P   P+            L+
Sbjct: 491 MNIVKVVAGWGHSAALTVDGQLYVCGRNYQ---GQLGLGSPQGFPQNERGHPFQADFCLI 547

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-G 270
           + L+ +  KQ+  G   +  +   G V + G+   GQLGH  T     P+ +  L+    
Sbjct: 548 DRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRR 607

Query: 271 SVVQIAAGPSYMLAVTGNGVVY 292
            ++ +A G +  L + G GV +
Sbjct: 608 EIMHVACGNNCTLVLAG-GVAF 628


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 165/341 (48%), Gaps = 19/341 (5%)

Query: 132 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           ++  G++  G LG G  E  Q ++ +RI +   + V Q++    H  F+  SG+V+ CG 
Sbjct: 3   LYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGS 62

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N     GH     P  RP  +  L+     Q+  G   +  L+  G V + G N  GQLG
Sbjct: 63  NDYSQLGHE---LPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLG 119

Query: 251 HGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           H    D    PK +  L    +VVQIA G ++ LA+T  G +YS+GS     LG    +D
Sbjct: 120 HASDQDIVKLPKIVRNLVS-KTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPND 178

Query: 310 ELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
             Q   P  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  DE ++  
Sbjct: 179 LQQSNTPMRLTTLL--GIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAY 236

Query: 367 PEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
           P  L +L++ L V+   C  +   F+ ++ G V+  G   +G LG    G S   + PR+
Sbjct: 237 PTQLKTLRT-LGVRFVACGDEFSVFLTIE-GGVFTCGAGAYGQLG---HGFSSNEMLPRM 291

Query: 425 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 464
           +  L    +SQ++ G  HT+ +V  RGR++GFG     QLG
Sbjct: 292 VMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLG 332



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 15/301 (4%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  HTL ++ S  V++CGS+    LGH   T + +    +       + Q++    
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPEL---QDYVITQIACGSR 96

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  + + GQVF+ GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 97  HSMALSEWGQVFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTC 156

Query: 235 RGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G +++ GSN +GQLG     D     TP  +  L  +  V  IA G ++   ++ +  V
Sbjct: 157 CGELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGI-PVSAIACGGNHSFLISKSSAV 215

Query: 292 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L   G V+T G
Sbjct: 216 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTIEGGVFTCG 271

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 408
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G +YGFG    G L
Sbjct: 272 AGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQL 331

Query: 409 G 409
           G
Sbjct: 332 G 332



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 10/245 (4%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            ++  G+ +HGQLG G   +    TP  I P +   +V QIA G  + L +T +G VY+ 
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRI-PWKPDSAVNQIACGHRHTLFLTASGKVYAC 60

Query: 295 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           GS     LGH     EL   R +Q    +   + +++ G  H +AL   G V++WG   C
Sbjct: 61  GSNDYSQLGH-----ELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNEC 115

Query: 354 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
           G LGH  + D   LP+ + +L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 116 GQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSS 175

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                +   P  L +L    VS I+ G  H+ +++    +FG+G N   QLG +      
Sbjct: 176 PNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 473 EPTEI 477
            PT++
Sbjct: 236 YPTQL 240



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H+ LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 234
           + F+   G VFTCG  +    GH  ++  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTIEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQLV 345


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 455
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 173/379 (45%), Gaps = 39/379 (10%)

Query: 102 HSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
            S+ +V  +AG       G   T+L S+ +V++ G +  G LG+G E      F +++  
Sbjct: 32  ESTSVVSINAG-------GYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSY-FGKVD-- 81

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               VV + +  +H   + + G V+  G NS       +  + I RP  +  LK +   Q
Sbjct: 82  ELYDVVSLDSDMDHTLAITKHGTVWGWGYNSKGEI--TEGGKNIARPVQINGLKDIV--Q 137

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           V+ GL  +  L   G V + G N +GQLG+G   D   P  +   E + ++V I AG  +
Sbjct: 138 VSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKV---EFLSNIVAIEAGAEH 194

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            LA++ +G V+++G      LG+GE      PR ++       ++  ++ GD H +ALD 
Sbjct: 195 SLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLE----NIEMIAGGDNHSLALDH 250

Query: 342 SGYVYTWGKGYCGALGHG------------DEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
            G ++ WG    G +G G            ++ +KT P  L+ L   +  QV A  + + 
Sbjct: 251 DGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVK-QVSAGIKHST 309

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            L + G VY +GW  +G LG      S   LR  +        +  I TG YH+  V + 
Sbjct: 310 ALTENGEVYAWGWNEYGQLGNGSMKDSKVPLRNNV-----GRSIIDIETGSYHSFAVDES 364

Query: 450 GRLFGFGDNERAQLGHDTL 468
           G ++ +GD    QLG  T 
Sbjct: 365 GVIYAWGDATYGQLGDGTF 383



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 28/328 (8%)

Query: 160 FPSAAH---VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           FP  +    VV ++A    +  +   G V+T G N+    G+       +  ++ E    
Sbjct: 27  FPKNSESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELYDV 86

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQI 275
           V    + + ++ T  +T  G V   G N+ G++  G   + RP    I  L+++   VQ+
Sbjct: 87  VS---LDSDMDHTLAITKHGTVWGWGYNSKGEITEGGKNIARPV--QINGLKDI---VQV 138

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
           + G  + LA+  +G V+S+G      LG+G   D   P  ++       ++V + AG EH
Sbjct: 139 STGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEFLS----NIVAIEAGAEH 194

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +AL + G V+ WG+   G LG+G+     +P  + +L++     +      +  L   G
Sbjct: 195 SLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLEN--IEMIAGGDNHSLALDHDG 252

Query: 396 SVYGFGWMGFGSLGFPDRGVSDK--VLR-------PRILDSLRAHHVSQISTGLYHTVVV 446
           +++ +G+   G +G     V +K   LR       P  L+ L    V Q+S G+ H+  +
Sbjct: 253 AIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGK-VKQVSAGIKHSTAL 311

Query: 447 TDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           T+ G ++ +G NE  QLG+ +++    P
Sbjct: 312 TENGEVYAWGWNEYGQLGNGSMKDSKVP 339



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 13/177 (7%)

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           C     Q D L P+  ++       VV ++AG      L S G V+T G+   G LG+G 
Sbjct: 16  CSQQAVQEDALFPKNSES-----TSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGT 70

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           E D +    +  L  +  V + +    T  +   G+V+G+G   + S G    G    + 
Sbjct: 71  EKDSSYFGKVDEL--YDVVSLDSDMDHTLAITKHGTVWGWG---YNSKGEITEG-GKNIA 124

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           RP  ++ L+   + Q+STGL H++ +   G ++ +G+N   QLG+ T +    PT++
Sbjct: 125 RPVQINGLK--DIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKV 179


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 154/324 (47%), Gaps = 21/324 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+Q++    HAA V + G++FT G+ S    GH    + + +PRLVEA+       V  G
Sbjct: 281 VLQIACGVKHAALVTRQGELFTWGEESGGRLGH-GVGKNVIQPRLVEAMASTTVDFVACG 339

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G  TH  G LGHG  +    PK IA PLE +  V  +  GP + 
Sbjct: 340 EFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGL-QVALVTCGPWHT 398

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             +T  G +++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+   
Sbjct: 399 ALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESL--SGLRTIAVACGVWHTAAVVEV 456

Query: 340 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                    SS  ++TWG G    LGHGD+  +  P  +S L      ++      T  L
Sbjct: 457 IVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSNFHRIACGHSLTVGL 516

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
             +G V+  G   +G LG P    SD  +   + D L    V +I+ G YH  V+T +  
Sbjct: 517 TTSGEVFTMGSSVYGQLGNPQ---SDGKVPCLVKDKLAGESVEEIACGAYHVAVLTSKNE 573

Query: 452 LFGFGDNERAQLGHDTLRGCLEPT 475
           ++ +G     +LGH  +     PT
Sbjct: 574 VYTWGKGANGRLGHGDVEDRKTPT 597



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 132/294 (44%), Gaps = 22/294 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE  A   +  +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI  P
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGP 382

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V  V+    H A +  +GQ+FT GD +    GH D    +  PR VE+L G+   
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDREN-VSYPREVESLSGLRTI 441

Query: 221 QVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V  G+  T  +                + T G     +LGHGD   R  P  ++ L + 
Sbjct: 442 AVACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLID- 500

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
            +  +IA G S  + +T +G V++ GS     LG+  Q D   P  ++  +  G  V  +
Sbjct: 501 SNFHRIACGHSLTVGLTTSGEVFTMGSSVYGQLGN-PQSDGKVPCLVKD-KLAGESVEEI 558

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
           + G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 559 ACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIAC 612



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 17/294 (5%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           I  PR +E+   +   Q+  G+     +T +G + T G  + G+LGHG   +   P+ + 
Sbjct: 267 ILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPRLVE 326

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            +    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I     +
Sbjct: 327 AMAST-TVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRI-AGPLE 384

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  + + P  + SL     + V 
Sbjct: 385 GLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVA 444

Query: 383 ARKRKTFVLVD------TGSVYG---FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
                T  +V+      + SV     F W G G       G  D  L P  +  L   + 
Sbjct: 445 CGVWHTAAVVEVIVTQSSASVSSDKLFTW-GDGDKNRLGHGDKDARLEPTCVSLLIDSNF 503

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 484
            +I+ G   TV +T  G +F  G +   QLG+    G   CL   ++  + +EE
Sbjct: 504 HRIACGHSLTVGLTTSGEVFTMGSSVYGQLGNPQSDGKVPCLVKDKLAGESVEE 557



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 19/252 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           +T G +HT LI+++  +F+ G    GVLGHG    + VS+ R +   S    + V+    
Sbjct: 391 VTCGPWHTALITSTGQLFTFGDGTFGVLGHGDR--ENVSYPREVESLSGLRTIAVACGVW 448

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A V++           S ++FT GD      GH D +  +  P  V  L      ++ 
Sbjct: 449 HTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARL-EPTCVSLLIDSNFHRIA 507

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V T GS+ +GQLG+  + D   P  +       SV +IA G  ++ 
Sbjct: 508 CGHSLTVGLTTSGEVFTMGSSVYGQLGNPQS-DGKVPCLVKDKLAGESVEEIACGAYHVA 566

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+    
Sbjct: 567 VLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDR--HVKYIACGSNYSAAICLHK 624

Query: 344 YVYTWGKGYCGA 355
           +V    +  C A
Sbjct: 625 WVSGAEQSQCSA 636



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L PR +++     + V++++ G +H   +   G ++TWG+   G LGHG   +   P 
Sbjct: 266 DILLPRPLES--NVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPR 323

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 427
            + ++ S     V   +  T  +   G +Y +G  G  + G    G       P RI   
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWG-DGTHNAGLLGHGTDVSHWIPKRIAGP 382

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           L    V+ ++ G +HT ++T  G+LF FGD     LGH        P E+
Sbjct: 383 LEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREV 432


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 155/330 (46%), Gaps = 23/330 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  +S    HA  V + G+ F+ G+ +    GH      +  P+L++  KG+  + +  G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGH-GAETDVSHPKLIKNFKGMNVELIACG 368

Query: 226 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              +  +T  G ++T G  + + G LGH        PK +  L E   V  ++ GP +  
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCGPWHTA 428

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA----- 338
            +T  G +++FG G+   LGHG++   + PR ++TF   G+  ++V+ G  H  A     
Sbjct: 429 LITSAGRLFTFGDGTFGALGHGDRSGCITPREVETF--NGLKTLKVACGVWHTAAVVELM 486

Query: 339 --LDS------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
             LDS      SG ++TWG G  G LGHGD   +  P+ +++L      +V      T  
Sbjct: 487 SGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVACSYAMTVA 546

Query: 391 LVDTGSVYGFGWMGFGSLGFP-DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
           L  TG VY  G   +G LG P   G+S   +   ++DS     V +IS G +H  V+T R
Sbjct: 547 LTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDST----VEEISCGSHHVAVLTSR 602

Query: 450 GRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
             ++ +G  E  QLGH        PT + I
Sbjct: 603 TEVYTWGKGENGQLGHGDCENKCTPTLVDI 632



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 120/284 (42%), Gaps = 20/284 (7%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 156
           V H   I      N   I  G YH+  +++S     +  G+   G+LGH  E +  +   
Sbjct: 348 VSHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKK 407

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
                    V  VS    H A +  +G++FT GD +    GH D +  I  PR VE   G
Sbjct: 408 VCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCI-TPREVETFNG 466

Query: 217 VPCKQVTAGLNFTGFL-------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           +   +V  G+  T  +                G + T G    G+LGHGD   R  P+ I
Sbjct: 467 LKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCI 526

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             L +  S  ++A   +  +A+T  G VY+ GS     LG     + + P  ++ +    
Sbjct: 527 TALVD-KSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLG-CPLANGMSPICVEDYLVDS 584

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             V  +S G  HV  L S   VYTWGKG  G LGHGD  +K  P
Sbjct: 585 T-VEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTP 627



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 33/252 (13%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G +HT LI+++  +F+ G    G LGHG + + C++   +   +    ++V+    H
Sbjct: 420 VSCGPWHTALITSAGRLFTFGDGTFGALGHG-DRSGCITPREVETFNGLKTLKVACGVWH 478

Query: 176 AAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
            A V++             SG +FT GD      GH D N+P   P+ + AL      +V
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGD-NKPRLAPQCITALVDKSFSEV 537

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEV---GSVVQIAA 277
                 T  LT  G V+T GSN +GQLG       P    ++P+  E+     +V +I+ 
Sbjct: 538 ACSYAMTVALTTTGRVYTMGSNVYGQLGC------PLANGMSPICVEDYLVDSTVEEISC 591

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  ++  +T    VY++G G N  LGHG+  ++  P  +   R K   V R+  G     
Sbjct: 592 GSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDK--QVKRIVCGSNFSA 649

Query: 338 ALDSSGYVYTWG 349
           A+     V+ W 
Sbjct: 650 AI----CVHNWA 657


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 455
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 455
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG    G + 
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H SQ+S
Sbjct: 334 NVKCPSPVKGHWAAHSSQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADR 358


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 142/277 (51%), Gaps = 20/277 (7%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 274
           K+V  G N + FL   G V+TCG NT GQLGH    ++P        E++G+     +V 
Sbjct: 491 KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--------EQIGALADQHIVH 542

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 333
           +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ I  ++VS G+
Sbjct: 543 VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGN 600

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            H +AL + G  +TWGK   G LG G E   +T P+ + SL+     QV A    +F L 
Sbjct: 601 WHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 660

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G+V+G+G    G LG  D    +    P  +  LR   V  IS G  HT V+T  G +
Sbjct: 661 LSGAVFGWGMNNAGQLGLSDEKDRES---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 717

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
           F FG     QLGHD++   + P  +      E T +A
Sbjct: 718 FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA 754



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 157/303 (51%), Gaps = 14/303 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 224
           V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL       V  
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQHIVHVAC 545

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYML 283
           G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ G  + L
Sbjct: 546 GESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSCGNWHCL 604

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           A+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  S
Sbjct: 605 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHSFALSLS 662

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G V+ FG 
Sbjct: 663 GAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGA 722

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 461
              G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ FG   R 
Sbjct: 723 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARG 779

Query: 462 QLG 464
           QLG
Sbjct: 780 QLG 782



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 149/321 (46%), Gaps = 11/321 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 497 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 553

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 554 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 613

Query: 240 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 614 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 672

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 673 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 730

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 731 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 787

Query: 418 KVLRPRILDSLRAHHVSQIST 438
            V  P  +    A H  Q+S 
Sbjct: 788 NVKCPSPVKGYWAAHSGQLSA 808



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 131/273 (47%), Gaps = 7/273 (2%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 541 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 599

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 600 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 659

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 660 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 718

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 719 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 776

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
             G LG G   +   P P+    +  + Q+ AR
Sbjct: 777 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSAR 809


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGF 455
           V+ FG    G LG     V+D+V  PR +  L    V+QI+ G  HT+ +V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSVNDEV-NPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLG 409
               D+  P  +  L      Q+   ++ T  LV  +G +Y FG    G LG
Sbjct: 277 DSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLG 328



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 133/279 (47%), Gaps = 13/279 (4%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +AL  SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSVNDEVNPRRV--LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAV---QVCARKRK 387
             G LG G   +   P P   +K H A    Q+ AR  +
Sbjct: 323 AKGQLGTGHTCNVKCPSP---VKGHWAAHSGQLSARADR 358


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 168/360 (46%), Gaps = 25/360 (6%)

Query: 126 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + S   ++  GS+  G LG G  E  Q ++  +I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+ CG N     GH   + P  RP+L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 299 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
              LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG  DE ++  P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           S   + PR++  L    ++Q++ G  HT+ +V  RG+++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 137/301 (45%), Gaps = 15/301 (4%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  HTL ++ +  V++CGS+    LGH   T +      +       ++Q+S    
Sbjct: 44  QVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPQLIPELQ---DYVIIQISCGSR 100

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 292 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 408
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQL 335

Query: 409 G 409
           G
Sbjct: 336 G 336



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 13/261 (4%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI+ G  H+L +S+   V S G + CG LGH  E         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 228
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 347
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGKVYA 326

Query: 348 WGKGYCGALGHGDEIDKTLPE 368
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 8/244 (3%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            ++  GS +HGQLG G   D    TP+ I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           GS     LGH       +P+ I   +   I  +++S G  H +AL   G V +WG   CG
Sbjct: 65  GSNDYSQLGHDLPTK--RPQLIPELQDYVI--IQISCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 355 ALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LGH  E +   LP+ +  L S   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 NDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY 240

Query: 474 PTEI 477
           PT++
Sbjct: 241 PTQL 244



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 171
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 288
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAI 316
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GKVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL S G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG   +G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSYGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 133/246 (54%), Gaps = 8/246 (3%)

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYS 293
             G ++ CG  T+G+LG G + + P P+ I  L + V   V + +G  + +A+T +G V+S
Sbjct: 2945 EGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 3004

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            +G G +  LGHG + +  +P+ I+  R K I    ++ G  H  A+ SSG +YTWG G  
Sbjct: 3005 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--DIACGSSHSAAITSSGELYTWGLGEY 3062

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
            G LGHGD I +  P+ + SL  H  VQV   +R  +T  L D G V+ +G   FG LG  
Sbjct: 3063 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLG-- 3120

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
             RG S+    P  ++ L A  V QI  G   ++ +T  G ++ +G  +  +LGH + +  
Sbjct: 3121 -RGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 3179

Query: 472  LEPTEI 477
             +PT I
Sbjct: 3180 RKPTVI 3185



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 154/315 (48%), Gaps = 15/315 (4%)

Query: 159  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKG 216
            +F S    + ++        V   G+++ CG+  N     GH + N P   PR +  L  
Sbjct: 2922 DFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSN-NVPY--PRPIPFLSQ 2978

Query: 217  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
               K+V   +G      LT+ G V + G    G+LGHG+ L+   PK I  L     +  
Sbjct: 2979 YVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRS-KKIRD 3037

Query: 275  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-- 332
            IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ I++    G  +V+V+ G  
Sbjct: 3038 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSL--VGHRIVQVACGSR 3095

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D   +AL   G+V++WG G  G LG G      +P  +  L +   VQ+    + +  L 
Sbjct: 3096 DAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALT 3155

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
             TG V+ +G   +  LG    G    V +P +++SL+   V  ++ G  H + VTD G++
Sbjct: 3156 KTGEVWTWGKGDYFRLG---HGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQV 3212

Query: 453  FGFGDNERAQLGHDT 467
            + +GDN+  Q G+ T
Sbjct: 3213 YAWGDNDHGQQGNGT 3227



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 151/315 (47%), Gaps = 7/315 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            S    VQ+   E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3901 STLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VLVPTLLESIQHVFIKK 3959

Query: 222  --VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
              V +G      L+    V++ G    G+LGHG+ L   TPK I  L+    ++ IA G 
Sbjct: 3960 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGY-EIIDIACGG 4018

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            ++  A+T  G +Y++G G    LGHG+  D+L+P+ I+      +  V   +GD   + +
Sbjct: 4019 AHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 4078

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                 V++WG G  G LG G      +P+ + SL     ++V    + +  L  +GSVY 
Sbjct: 4079 TDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYT 4138

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G  + V RP+ + +L+   +  I+TG  H V  +D G +F +GDN+
Sbjct: 4139 WGKGDYHRLG---HGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDND 4195

Query: 460  RAQLGHDTLRGCLEP 474
              QLG DT      P
Sbjct: 4196 EGQLGDDTTNAIQRP 4210



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 161/345 (46%), Gaps = 39/345 (11%)

Query: 142 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 201
           + G GP+    +S   I         Q+  S+     + Q+G+VF    +S   C     
Sbjct: 457 IFGVGPQNCDTLSELTIK--------QICCSDRTILILTQTGKVFFMYYSSDTQC----- 503

Query: 202 NRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 258
                 P+ +  L G+   ++ A   G ++   LT    V++ G+   G+LGHGDT  + 
Sbjct: 504 ------PQEMTGLSGINMIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKE 556

Query: 259 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 318
            P  I  L+    ++ +  G +Y  A++ NG +Y++G G+   LGHG   D L P  I  
Sbjct: 557 EPTLIQALKG-KDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISA 615

Query: 319 FRRKGIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
              +  H+++V+ G    H + + S G VY+WG G  G LG G      LP  +  L++ 
Sbjct: 616 LSDE--HIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV 673

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
             VQV    + +  L + G VY +G      LG P     + V  P +++ LR   V  +
Sbjct: 674 KIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHP---TEENVRFPEMVEVLRDRKVVGV 730

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           S G+ H + +TD+G ++G+G NE  Q+         + +E+F+Q+
Sbjct: 731 SLGVSHVLALTDQGEVYGWGKNENKQI--------CDSSELFVQQ 767



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 155/323 (47%), Gaps = 18/323 (5%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE--NHAAFVLQSGQVFTC 188
            +++CG    G LG G      V + R I F S   + +V+      HA  +   G+VF+ 
Sbjct: 2948 LYACGEGTNGRLGLGHSNN--VPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 3005

Query: 189  GDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G+      GH   NR  + +P+++EAL+    + +  G + +  +T  G ++T G   +G
Sbjct: 3006 GEGEDGKLGH--GNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYG 3063

Query: 248  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGH 304
            +LGHGD + +  PK I  L  VG  +VQ+A G   +  LA+T  G V+S+G G    LG 
Sbjct: 3064 RLGHGDNITQLKPKLIKSL--VGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGR 3121

Query: 305  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
            G       P  I+  R   + VV++  G +  +AL  +G V+TWGKG    LGHG +   
Sbjct: 3122 GGSEGCNIPHNIE--RLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 3179

Query: 365  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
              P  + SLK    + V         + DTG VY +G    G  G    G +    +P +
Sbjct: 3180 RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTIVNRKPAL 3236

Query: 425  LDSLRAHHVSQISTGLYHTVVVT 447
            +  L   H+++++ G  H++  T
Sbjct: 3237 VHGLEDVHINRVACGSSHSIAWT 3259



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 137/282 (48%), Gaps = 13/282 (4%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAG 225
            + V++   H   +     V++ G+      GH   NR     P+L+EAL+G     +  G
Sbjct: 3960 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH--GNRLACETPKLIEALQGYEIIDIACG 4017

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIA--AGPSYM 282
               +  +T  G ++T G   +G+LGHGD+ D+  PK I  L  VG  V+ +A  +G +  
Sbjct: 4018 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEEL--VGYKVIDVACGSGDAQT 4075

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            L +T +  V+S+G G    LG G       P+ I++    G+ V++V  G +  VAL  S
Sbjct: 4076 LCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESL--AGLGVIKVECGSQFSVALTRS 4133

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            G VYTWGKG    LGHG       P+ +++L+    + +           D G V+ +G 
Sbjct: 4134 GSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGD 4193

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               G LG      ++ + RPR++ +L+   ++ ++ G  HT+
Sbjct: 4194 NDEGQLG---DDTTNAIQRPRLVSALQGKKITNVACGSAHTL 4232



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 155/357 (43%), Gaps = 21/357 (5%)

Query: 42  FGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVE 101
           F    G+ PQ   +L +L   Q+C        +++  ++  +            +    +
Sbjct: 454 FSWIFGVGPQNCDTLSELTIKQICCSDRTILILTQTGKVFFM-----------YYSSDTQ 502

Query: 102 HSSDIVETSAGNQMQITT---GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 158
              ++   S  N ++I     G+++  L  +  V+S G+   G LGHG  +T+    T I
Sbjct: 503 CPQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLI 561

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
                  ++ V     ++A +  +G ++T G  +    GH  T      P ++ AL    
Sbjct: 562 QALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGH-GTAEDCLTPTMISALSDEH 620

Query: 219 CKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             +V  G  +   L I  +G V++ G   +G+LG G +     P+ I  L+ V  +VQ+ 
Sbjct: 621 IIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV-KIVQVY 679

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G  + +A++ +G VY++G G  + LGH  + +   P  ++  R +   VV VS G  HV
Sbjct: 680 CGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDR--KVVGVSLGVSHV 737

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           +AL   G VY WGK     +    E+    P  + +LK    V VC    ++F   D
Sbjct: 738 LALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTD 794



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 10/249 (4%)

Query: 233  TIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            T+   V   G N   QLG   G  +  P       L ++  +  IA G   +  V+  G 
Sbjct: 2891 TVGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDF--LSQLWPI-HIAGGSKSLFIVSHEGK 2947

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            +Y+ G G+N  LG G  ++   PR I    +  I  V V +G +H +AL   G V++WG+
Sbjct: 2948 LYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGE 3007

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  G LGHG+ ++   P+ + +L+S     +      +  +  +G +Y +G   +G LG 
Sbjct: 3008 GEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGH 3067

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTL 468
             D       L+P+++ SL  H + Q++ G     T+ +TD G +F +GD +  +LG    
Sbjct: 3068 GDNITQ---LKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGS 3124

Query: 469  RGCLEPTEI 477
             GC  P  I
Sbjct: 3125 EGCNIPHNI 3133



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP ++++ L  V    Q+  G   + AVT +G VY
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV----QLVGGEQTLFAVTADGKVY 3925

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G     L P  +++ +   I  + V++G +H +AL +   VY+WG+G 
Sbjct: 3926 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3985

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+ +    P+ + +L+ +  + +      +  +  TG +Y +G   +G LG  D
Sbjct: 3986 DGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD 4045

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P++++ L  + V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4046 ---SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4102

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4103 CKVPKKI 4109



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 21/257 (8%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 172
            G++   L  +  VFS G    G LGHG       P+  + +   +I          ++  
Sbjct: 2990 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--------DIACG 3041

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 230
             +H+A +  SG+++T G       GH D N    +P+L+++L G    QV  G     T 
Sbjct: 3042 SSHSAAITSSGELYTWGLGEYGRLGHGD-NITQLKPKLIKSLVGHRIVQVACGSRDAQTL 3100

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             LT  G V + G    G+LG G +     P +I  L  +  VVQI  G  + LA+T  G 
Sbjct: 3101 ALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGE 3159

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            V+++G G  F LGHG      +P  I++ + K   V+ V+ G  H +A+  +G VY WG 
Sbjct: 3160 VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK--KVIHVAVGALHCLAVTDTGQVYAWGD 3217

Query: 351  GYCGALGHGDEIDKTLP 367
               G  G+G  I    P
Sbjct: 3218 NDHGQQGNGTTIVNRKP 3234



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 19/293 (6%)

Query: 113  NQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S ++ V+S G    G LGHG     C +   I       ++ ++ 
Sbjct: 3958 KKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETPKLIEALQGYEIIDIAC 4016

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
               H+A +  +GQ++T G       GH D+   + +P+L+E L G     V  G      
Sbjct: 4017 GGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL-KPKLIEELVGYKVIDVACGSGDAQT 4075

Query: 232  LTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
            L I    +V + G   +G+LG G +     PK I  L  +G V+++  G  + +A+T +G
Sbjct: 4076 LCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VIKVECGSQFSVALTRSG 4134

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA    G V+TWG
Sbjct: 4135 SVYTWGKGDYHRLGHGTGEHVRRPKKVAAL--QGKKIISIATGSLHCVACSDEGEVFTWG 4192

Query: 350  KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
                G L  GD+    +  P           V A + K    V  GS +   W
Sbjct: 4193 DNDEGQL--GDDTTNAIQRPR---------LVSALQGKKITNVACGSAHTLAW 4234



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            ++  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3860 EDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVT 3919

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G VY     G+G+ G    G +D VL P +L+S++   + +I+  +G  H + ++   
Sbjct: 3920 ADGKVYA---TGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADN 3976

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ +  +LGH     C  P  I
Sbjct: 3977 DVYSWGEGDDGKLGHGNRLACETPKLI 4003


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 9/309 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA   VQ++  E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3927 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDS-VMMPTLLESIQHVFVKK 3985

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAG 278
            V   +G      L+  GHV++ G    G+LGHG+ L    PK I  L  +G+ +V +A G
Sbjct: 3986 VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEEL--LGTEIVDVACG 4043

Query: 279  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
              +  A+T  G +Y++G G    LGHG+  D+L P+ ++  +   +  V   +GD   + 
Sbjct: 4044 GHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLC 4103

Query: 339  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +     V++WG G  G LG G      +P  + SL     ++V    + +  L  +GS+Y
Sbjct: 4104 VTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIY 4163

Query: 399  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G +F +GDN
Sbjct: 4164 TWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDN 4220

Query: 459  ERAQLGHDT 467
            +  QLG  T
Sbjct: 4221 DEGQLGDGT 4229



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 154/324 (47%), Gaps = 10/324 (3%)

Query: 156  TRINF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            T ++F  S   +VQ  AS        Q   V+  G N     G    ++ I  P   E+L
Sbjct: 2881 TSVSFLASDWEIVQEQASSQRGVETPQHSAVYVWGLNDKDQLGGLKGSK-IKLPVYSESL 2939

Query: 215  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVV 273
              +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I  L + V   V
Sbjct: 2940 SKLKPVHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKV 2999

Query: 274  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
             + +G  + LA+T +G V+S+G G +  LGHG      +PR I++ + K I    V+ G 
Sbjct: 3000 AVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIR--DVACGS 3057

Query: 334  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVL 391
             H  A+ SSG +YTWG G  G LGHGD   +  P+ + SL     +QV   +R  +T  L
Sbjct: 3058 GHSAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMAL 3117

Query: 392  VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
               GSVY +G   FG LG   RG SD    P ++D L    V QI  G   ++ +T  G 
Sbjct: 3118 TADGSVYSWGDGDFGKLG---RGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGE 3174

Query: 452  LFGFGDNERAQLGHDTLRGCLEPT 475
            ++ +G  +  +LGH       +PT
Sbjct: 3175 VWTWGKGDYFRLGHGNDHHVRKPT 3198



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 157/325 (48%), Gaps = 16/325 (4%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTCG 189
            +++CG    G LG G +   C     I F S   +  V V +   HA  + Q G+VF+ G
Sbjct: 2963 LYACGEGTNGRLGLGDDGNAC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWG 3021

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +      GH + +  + +PRL+E+LK    + V  G   +  +T  G ++T G   +G+L
Sbjct: 3022 EGEDGKLGHGNCSS-LDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRL 3080

Query: 250  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            GHGDT  +  PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 3081 GHGDTNTQLKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG 3138

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
                  P  +   R  G+ VV++  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 3139 SDGCYTPLLVD--RLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 3196

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P  +  L+    + V         + DTG VY +G    G  G     V+ K   P ++ 
Sbjct: 3197 PTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKK---PSLVH 3253

Query: 427  SLRAHHVSQISTGLYHTV--VVTDR 449
             L    V+++S G  H++  V+TD+
Sbjct: 3254 ELDDARVNRVSCGSSHSIAWVLTDQ 3278



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 162/342 (47%), Gaps = 17/342 (4%)

Query: 110  SAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-- 166
            SA   +Q+T G      ++ +  V++ G    G LG G   T  V    +   S  HV  
Sbjct: 3927 SALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIG--GTDSVMMPTL-LESIQHVFV 3983

Query: 167  --VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVT 223
              V V++   H   +   G V++ G+      GH   NR  + RP+L+E L G     V 
Sbjct: 3984 KKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH--GNRLSYDRPKLIEELLGTEIVDVA 4041

Query: 224  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 282
             G + +  +T  G ++T G   +G+LGHGD+ D+ TPK +  L++   + V   +G +  
Sbjct: 4042 CGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQT 4101

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            L VT +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  S
Sbjct: 4102 LCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVIKVECGSQFSVALTRS 4159

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            G +YTWGKG    LGHG +     P  +++L+    + +           D G V+ +G 
Sbjct: 4160 GSIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGD 4219

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               G LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 4220 NDEGQLG---DGTTCALQRPRLVHALQGKKITRVACGSAHTL 4258



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 140/291 (48%), Gaps = 11/291 (3%)

Query: 179  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRG 236
            V Q G+++ CG+ ++   G  D       P+ +  L     K+V   +G      LT  G
Sbjct: 2957 VSQEGKLYACGEGTNGRLGLGDDGNAC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDG 3015

Query: 237  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
             V + G    G+LGHG+      P+ I  L+    +  +A G  +  A+T +G +Y++G 
Sbjct: 3016 RVFSWGEGEDGKLGHGNCSSLDKPRLIESLKS-KRIRDVACGSGHSAAITSSGELYTWGL 3074

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCG 354
            G    LGHG+ + +L+P+ +Q+    G  V++V+ G  D   +AL + G VY+WG G  G
Sbjct: 3075 GEYGRLGHGDTNTQLKPKLVQSL--VGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFG 3132

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG    G
Sbjct: 3133 KLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG---HG 3189

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
                V +P +++ LR   V  ++ G  H + VTD G+++ +GDN+  Q G+
Sbjct: 3190 NDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3240



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 121/253 (47%), Gaps = 13/253 (5%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 176
            G++   L  +  VFS G    G LGHG     C S  +   I    +  +  V+    H+
Sbjct: 3005 GKHALALTQDGRVFSWGEGEDGKLGHG----NCSSLDKPRLIESLKSKRIRDVACGSGHS 3060

Query: 177  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 234
            A +  SG+++T G       GH DTN  + +P+LV++L G    QV  G     T  LT 
Sbjct: 3061 AAITSSGELYTWGLGEYGRLGHGDTNTQL-KPKLVQSLVGQRVIQVACGSRDAQTMALTA 3119

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
             G V++ G    G+LG G +    TP  +  L  +G VVQI  G  + LA+T  G V+++
Sbjct: 3120 DGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLG-VVQIECGAQFSLALTKYGEVWTW 3178

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G  F LGHG  H   +P  ++  R  G  V+ V+ G  H +A+  +G VY WG    G
Sbjct: 3179 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG 3236

Query: 355  ALGHGDEIDKTLP 367
              G+G  I    P
Sbjct: 3237 QQGNGSTIVNKKP 3249



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  P   +S++ L  V    Q+  G   + AVT +G VY
Sbjct: 3896 GAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPV----QLTGGEQTLFAVTADGKVY 3951

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G     + P  +++ +   +  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3952 ATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4011

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+ +    P+ +  L     V V      +  +   G +Y +G   +G LG  D
Sbjct: 4012 DGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4071

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L P+++++L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4072 ---SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4128

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4129 CKVPMKI 4135



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 9/262 (3%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 232
            H   + +   V++ G+      GH D  R  +  P+L+E+L       +  G  ++  L
Sbjct: 516 KHYLALTEDSSVYSWGNGDGGRLGHGD--RTWYEEPKLIESLVDKNITFIACGSTYSAAL 573

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVV 291
           +  G ++T G   +G+LGHG++ D   P  ++ L   +   V   +G S  L VT +G+V
Sbjct: 574 SSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIV 633

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +S+G G    LG G  +    P+ +       I+V +V  G +   AL + G VYTWGKG
Sbjct: 634 FSWGDGDYGKLGRGGCNGSKTPKIVDKLL--DINVAKVYCGGQFSAALTAYGEVYTWGKG 691

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
               LGHG+E     P+ + +LK+    ++C        L +   VYG+G   +G +   
Sbjct: 692 EAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQI--- 748

Query: 412 DRGVSDKVLRPRILDSLRAHHV 433
           D  +   V  P +  +L   +V
Sbjct: 749 DPALGTIVSEPTLCPTLSGKNV 770



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 110/232 (47%), Gaps = 4/232 (1%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT    V++ G+   G+LGHGD      PK I  L +  ++  IA G +Y  A++ NG +
Sbjct: 521 LTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVD-KNITFIACGSTYSAALSSNGEL 579

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y++G G+   LGHG   D + P  +       I  V   +GD   + + +SG V++WG G
Sbjct: 580 YTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDG 639

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G       P+ +  L      +V    + +  L   G VY +G      LG  
Sbjct: 640 DYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLG-- 697

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G  + V  P+ +++L+   V ++  G  H + +T+   ++G+G N+  Q+
Sbjct: 698 -HGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQI 748



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 27/249 (10%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 172
           G+++  L  +SSV+S G+   G LGHG       P+  + +    I F        ++  
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITF--------IACG 566

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVTAGLN 227
             ++A +  +G+++T G  +    GH +++  +  P LV AL G     V C    +G +
Sbjct: 567 STYSAALSSNGELYTWGRGNYGRLGHGNSDD-VMVPTLVSALNGHMIVYVAC---GSGDS 622

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            T  +T  G V + G   +G+LG G      TPK +  L ++ +V ++  G  +  A+T 
Sbjct: 623 QTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDI-NVAKVYCGGQFSAALTA 681

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            G VY++G G  + LGHG +     P+AI+  + K   V  +  G  HV+AL     VY 
Sbjct: 682 YGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTK--KVKELCVGSLHVLALTEDQLVYG 739

Query: 348 WGKGYCGAL 356
           WG+   G +
Sbjct: 740 WGRNDYGQI 748



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 17/195 (8%)

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           +L+ +GN  +  +GS + +            P+ +  F  K + ++      +H +AL  
Sbjct: 476 ILSTSGNVYMMYYGSETQY------------PQRVYGFSDKFVAMIASHPDGKHYLALTE 523

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
              VY+WG G  G LGHGD      P+ + SL       +      +  L   G +Y +G
Sbjct: 524 DSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWG 583

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
              +G LG    G SD V+ P ++ +L  H +  ++  +G   T+ VT  G +F +GD +
Sbjct: 584 RGNYGRLG---HGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGD 640

Query: 460 RAQLGHDTLRGCLEP 474
             +LG     G   P
Sbjct: 641 YGKLGRGGCNGSKTP 655


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 166/354 (46%), Gaps = 7/354 (1%)

Query: 129  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 188
             ++VF  G +    LG GP+ ++    T  +  SA   VQ+         V Q G+V+ C
Sbjct: 3463 QTNVFCWGLNDKDQLG-GPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYAC 3521

Query: 189  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 246
            G+ ++   G   T   +  PR + +L     K+V   +G   +  LT  G V + G    
Sbjct: 3522 GEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDD 3581

Query: 247  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            G+LGH    +   P+ I  L+    V  IA G S+  A+T NG +Y++G G    LGHG+
Sbjct: 3582 GKLGHFSRWNCDKPRLIEALKS-KRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGD 3640

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
               +L+P+ ++    + +  V   + D   +AL   G VY+WG G  G LG G      +
Sbjct: 3641 NTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNV 3700

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P  +  L+     Q+    + +  L  +G V+ +G   +  LG    G    V +P+I++
Sbjct: 3701 PHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLG---HGTDAHVRKPQIVE 3757

Query: 427  SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
             L+   +  ++ G  H + VTD G++F +GDN+  Q G+ T     +P  + ++
Sbjct: 3758 GLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALVVLE 3811



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 133/265 (50%), Gaps = 5/265 (1%)

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G ++ G LT  G V + G+   G+LGHGD  +   P  I  L     V +I  G SY +A
Sbjct: 628 GKHYMG-LTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSG-KQVAKICCGSSYSVA 685

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +T NG VYS+G G+   LGHG   D+  P  ++ F+   I  V   +GD   +A+  SG 
Sbjct: 686 LTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VY+WG G  G LG G       P+ +  L     V+V    + +  L  +G+VY +G   
Sbjct: 746 VYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGD 805

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              LG    G  D    P+ +++L +  V  I+ G  H + +T+ G L+G+G NE+ QLG
Sbjct: 806 NYRLG---HGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLG 862

Query: 465 HDTLRGCLEPTEIFIQEMEEDTGLA 489
           + ++    EPT I   E +   G+A
Sbjct: 863 NPSISNFTEPTLIGGMEGKNIIGVA 887



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 7/310 (2%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ--VTA 224
            +Q+   E     V   G+VF  G  +    G   T   +  P  +E+++ V  K+  V +
Sbjct: 4497 IQLVGGEQTLFAVTAEGKVFATGYGAGGRLGVGGTES-VSHPTQLESIQHVFIKKLAVNS 4555

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            G      L+  G V++ G    G+LGHG+      P+ I  L     VV IAAG ++   
Sbjct: 4556 GGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIDSLRG-KEVVDIAAGGAHSAC 4614

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T NG +Y++G G    LGHG+  D+ +P+ ++  +   +  +   +GD   + +     
Sbjct: 4615 ITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDN 4674

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            V++WG G  G LG G      +P  + +L+    ++V    + +  L  +GSVY +G   
Sbjct: 4675 VWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGD 4734

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            +  LG    G  D V RPR + +L+   V  ++ G  H V  TD G +F +GDN+  QLG
Sbjct: 4735 YHRLG---HGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLG 4791

Query: 465  HDTLRGCLEP 474
              T      P
Sbjct: 4792 DGTTNAIQRP 4801



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 129/282 (45%), Gaps = 9/282 (3%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   +   G+VF+ G+      GH D       P L+  L G    ++  G +++  LT
Sbjct: 629 KHYMGLTSDGEVFSWGNGDGGKLGHGDYQNH-EEPALITGLSGKQVAKICCGSSYSVALT 687

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVV 291
             G V++ G    G+LGHG + D+ TP  +    +   +V +A  +G +  LAVT +G V
Sbjct: 688 SNGEVYSWGKGNFGRLGHGSSEDQTTPM-LLKFFKGHRIVDVACGSGDAQTLAVTDSGAV 746

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           YS+G G    LG G       P+ I+     G  VVRV  G++  +AL  SG VYTWGKG
Sbjct: 747 YSWGDGDYGKLGRGGNDGCKTPKVIEKLM--GQDVVRVYCGNQFSMALTKSGAVYTWGKG 804

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
               LGHG E     P+ + +L S     +         + + G +YG+G    G LG P
Sbjct: 805 DNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNP 864

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
              +S+    P ++  +   ++  ++ G   T   T  G+  
Sbjct: 865 --SISN-FTEPTLIGGMEGKNIIGVACGPTQTFAWTSGGQWI 903



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 121/251 (48%), Gaps = 10/251 (3%)

Query: 113  NQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S    V+S G    G LGHG   + C     I+      VV ++A
Sbjct: 4549 KKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHG-NRSPCDRPRVIDSLRGKEVVDIAA 4607

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               H+A +  +G+++T G       GH D+ ++P  RP+LVEALK      +  G     
Sbjct: 4608 GGAHSACITANGELYTWGKGRYGRLGHGDSEDQP--RPKLVEALKSYRVVDMACGSGDAQ 4665

Query: 231  FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
             L I    +V + G   +G+LG G +     P  I  L+  G V+++  G  + +A+T +
Sbjct: 4666 TLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQG-VMKVECGSQFSVALTKS 4724

Query: 289  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
            G VY++G G    LGHG      +PR +   + K   V+ V+ G  H VA   +G V++W
Sbjct: 4725 GSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNK--KVIDVACGSLHCVACTDTGEVFSW 4782

Query: 349  GKGYCGALGHG 359
            G    G LG G
Sbjct: 4783 GDNDEGQLGDG 4793



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 6/244 (2%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G +   G N  GQLG  D      P S   L  V   +Q+  G   + AVT  G V++ G
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALA-VTRPIQLVGGEQTLFAVTAEGKVFATG 4519

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+   LG G       P  +++ +   I  + V++G +H +AL + G VY+WG+G  G 
Sbjct: 4520 YGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGK 4579

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG  D   
Sbjct: 4580 LGHGNRSPCDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGD--- 4636

Query: 416  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            S+   RP+++++L+++ V  ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4637 SEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV 4696

Query: 474  PTEI 477
            P +I
Sbjct: 4697 PMKI 4700



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 127/279 (45%), Gaps = 9/279 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G+++  L S+  VFS G+   G LGHG +         I   S   V ++    +++  +
Sbjct: 628 GKHYMGLTSDGEVFSWGNGDGGKLGHG-DYQNHEEPALITGLSGKQVAKICCGSSYSVAL 686

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 237
             +G+V++ G  +    GH  ++     P L++  KG     V  G      L +   G 
Sbjct: 687 TSNGEVYSWGKGNFGRLGH-GSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 296
           V++ G   +G+LG G      TPK I  L  +G  VV++  G  + +A+T +G VY++G 
Sbjct: 746 VYSWGDGDYGKLGRGGNDGCKTPKVIEKL--MGQDVVRVYCGNQFSMALTKSGAVYTWGK 803

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           G N+ LGHG +     P+ I+    K   V  ++ G  H +A+   G +Y WG+   G L
Sbjct: 804 GDNYRLGHGTEDHARHPKQIEALSSK--KVKDIAIGSLHCMAITEDGELYGWGRNEQGQL 861

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
           G+    + T P  +  ++    + V     +TF     G
Sbjct: 862 GNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGG 900



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 10/212 (4%)

Query: 115  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            M   +G   TL I++  +V+S G    G LG G  +  C    +I       V++V    
Sbjct: 4657 MACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG-GSDGCKVPMKIETLQGQGVMKVECGS 4715

Query: 174  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
              +  + +SG V+T G       GH   +  + RPR V AL+      V  G       T
Sbjct: 4716 QFSVALTKSGSVYTWGKGDYHRLGHGSDDH-VRRPRKVSALQNKKVIDVACGSLHCVACT 4774

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVY 292
              G V + G N  GQLG G T     P+ +A L  +G  + ++A G ++ LA + N  V 
Sbjct: 4775 DTGEVFSWGDNDEGQLGDGTTNAIQRPRLVASL--LGKKINRVACGSAHSLAWSTNKAVS 4832

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            +    S+  +    +++ LQ   I   R + I
Sbjct: 4833 AGKLPSDIPM----EYNHLQNIPITALRNRLI 4860


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 150/305 (49%), Gaps = 21/305 (6%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           HA+ V + G+VFT G+ S  C GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 289 HASLVTRQGEVFTWGEESGGCLGH-GVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTM 347

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G ++T G  TH  G LGHG  +    PK IA PLE +  +  +A GP +   VT  G +
Sbjct: 348 AGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGL-QIAFVACGPWHTALVTSTGQL 406

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 340
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 407 FTFGDGTFGVLGHGDRQNVSYPREVESLL--GLRTIAVACGVWHTAAVVEVIATHSSTSI 464

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           SSG ++TWG G    LGHGD+  +  P  +++L      ++      T  L  +G V+  
Sbjct: 465 SSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFHKIACGHSLTAGLTKSGRVFTM 524

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   +G LG P    SD  +   + D +    + +I+ G YH  V+T +  ++ +G    
Sbjct: 525 GSTVYGQLGNPQ---SDGKVPCLVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGAN 581

Query: 461 AQLGH 465
            +LGH
Sbjct: 582 GRLGH 586



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 111/230 (48%), Gaps = 27/230 (11%)

Query: 265 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           PLE   V  V  IA G  +   VT  G V+++G  S  CLGHG   + +QPR ++     
Sbjct: 271 PLESSVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTST 330

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPE----PLSSLKSH 376
            +  V  + G+ H  A+  +G +YTWG G    G LGHG ++   +P+    PL  L+  
Sbjct: 331 TVDFV--ACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQ-- 386

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
           +A   C     T ++  TG ++ FG   FG LG  DR     V  PR ++SL       +
Sbjct: 387 IAFVACG-PWHTALVTSTGQLFTFGDGTFGVLGHGDR---QNVSYPREVESLLGLRTIAV 442

Query: 437 STGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           + G++HT  V +            G+LF +GD ++ +LGH      L+PT
Sbjct: 443 ACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPT 492



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 125/282 (44%), Gaps = 21/282 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G +H+  ++ +     +  G+   G+LGHG + +  +   RI  P     +  V+  
Sbjct: 335 VACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIP-KRIAGPLEGLQIAFVACG 393

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T  +
Sbjct: 394 PWHTALVTSTGQLFTFGDGTFGVLGHGDRQN-VSYPREVESLLGLRTIAVACGVWHTAAV 452

Query: 233 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                         G + T G     +LGHGD   R  P  +A L +  +  +IA G S 
Sbjct: 453 VEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALID-SNFHKIACGHSL 511

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
              +T +G V++ GS     LG+ +   ++         R+ I    ++ G  HV  L S
Sbjct: 512 TAGLTKSGRVFTMGSTVYGQLGNPQSDGKVPCLVGDKIARESIE--EIACGAYHVAVLTS 569

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 570 KNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIAC 611



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 150/357 (42%), Gaps = 56/357 (15%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 173
           R+ +L+     VF+ G    G LGHG       P   + ++ T ++F        V+  E
Sbjct: 288 RHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDF--------VACGE 339

Query: 174 NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H+  V  +G+++T GD  +++   GH          R+   L+G+    V  G   T  
Sbjct: 340 FHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAFVACGPWHTAL 399

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 286
           +T  G + T G  T G LGHGD  +   P+ +  L  + ++  +A G  +  AV      
Sbjct: 400 VTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIA-VACGVWHTAAVVEVIAT 458

Query: 287 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
                  +G ++++G G    LGHG++   L+P  +        H  +++ G      L 
Sbjct: 459 HSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFH--KIACGHSLTAGLT 516

Query: 341 SSGYVYTWGKGYCGALGH-----------GDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
            SG V+T G    G LG+           GD+I +   E ++    H+A           
Sbjct: 517 KSGRVFTMGSTVYGQLGNPQSDGKVPCLVGDKIARESIEEIACGAYHVA----------- 565

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           VL     VY +G    G LG  D  + D+   P ++++L+  HV  I+ G  ++  +
Sbjct: 566 VLTSKNEVYTWGKGANGRLGHGD--IEDRKT-PALVEALKDRHVKYIACGSNYSAAI 619



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 23/238 (9%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR--------------INFP 161
           +  G +HT L++++  +F+ G    GVLGHG    Q VS+ R                  
Sbjct: 390 VACGPWHTALVTSTGQLFTFGDGTFGVLGHGDR--QNVSYPREVESLLGLRTIAVACGVW 447

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
             A VV+V A+  H++  + SG++FT GD      GH D      +P  V AL      +
Sbjct: 448 HTAAVVEVIAT--HSSTSISSGKLFTWGDGDKNRLGHGD-KEARLKPTCVAALIDSNFHK 504

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           +  G + T  LT  G V T GS  +GQLG+  + D   P  +       S+ +IA G  +
Sbjct: 505 IACGHSLTAGLTKSGRVFTMGSTVYGQLGNPQS-DGKVPCLVGDKIARESIEEIACGAYH 563

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           +  +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 564 VAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDR--HVKYIACGSNYSAAI 619


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 153/350 (43%), Gaps = 25/350 (7%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+VFTCG N
Sbjct: 564 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 622

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
            +  CG   T R      + +   G        G   T  ++  G V TCG N  GQLGH
Sbjct: 623 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 682

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV--VYSFGSGSNFCLGHGEQ 307
           G+T     PK I  LE    +V++ +   Y  +LA     +  +Y+FG      LGH + 
Sbjct: 683 GNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 740

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            D   P+ ++    +   +V V+ G  H + + +SG  + +GK   G LG     ++  P
Sbjct: 741 IDRKIPQFVEALSDQ--QIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAP 798

Query: 368 EPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFGSLGFPDRGVS------- 416
                ++  L  Q C   R     T  L     ++ FG   +G LG      S       
Sbjct: 799 ---VQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQL 855

Query: 417 --DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              +    R++D L    + +I+ G YHT+ V+D G ++ FG N   QLG
Sbjct: 856 QQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 905



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 16/248 (6%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V +CG N++G+LGHGDT  R + + I  L++   ++QI AG  + + +T +G V++ G 
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFERIQALQQ-KEIIQIGAGNEHTVVLTADGKVFTCGY 621

Query: 297 GSNFCLGHG----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
             N   G G      H    P+        G        G EH + + + G V T G  Y
Sbjct: 622 NDNGQCGQGGTARVSHLSEIPKM-----DSGSSQAHAYNGCEHTILVSTDGRVATCGYNY 676

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV---YGFGWMGFGSLG 409
            G LGHG+   +++P+ + SL++ +   V      T +  + G++   Y FG   +G LG
Sbjct: 677 RGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLG 736

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
             D  +  K+  P+ +++L    +  ++ G YHT+VVT  G+ F FG N+  QLG DT+ 
Sbjct: 737 HND-SIDRKI--PQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTME 793

Query: 470 GCLEPTEI 477
             L P ++
Sbjct: 794 NQLAPVQV 801



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 6/283 (2%)

Query: 184 QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           +V++CG NS    GH DT +R  F    ++AL+     Q+ AG   T  LT  G V TCG
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFE--RIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 620

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
            N +GQ G G T        I  ++   S      G  + + V+ +G V + G      L
Sbjct: 621 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQL 680

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGDE 361
           GHG    E  P+ I++   K + +V  S     +   D +   +YT+G+   G LGH D 
Sbjct: 681 GHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 740

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
           ID+ +P+ + +L     V V   +  T V+  +G  + FG   +G LG     + +++  
Sbjct: 741 IDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGID--TMENQLAP 798

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            ++   L      +I  G YHT+ +     LF FG N+  QLG
Sbjct: 799 VQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG 841



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 152/353 (43%), Gaps = 30/353 (8%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSAS 172
           +QI  G  HT+ L ++  VF+CG +  G  G G  T +    + I    S +        
Sbjct: 598 IQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGG-TARVSHLSEIPKMDSGSSQAHAYNG 656

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   V   G+V TCG N     GH +T      P+++ +L+    + V+     T   
Sbjct: 657 CEHTILVSTDGRVATCGYNYRGQLGHGNTTSESV-PKIIRSLENKIVRLVSCSYYHTVLA 715

Query: 233 TIRGHV---HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              G++   +T G N +GQLGH D++DR  P+ +  L +   +V +A G  + + VT +G
Sbjct: 716 CEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSD-QQIVSVACGQYHTMVVTASG 774

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVY 346
             ++FG      LG     ++L P  +    R G+     + +  G  H +AL S  +++
Sbjct: 775 KAFAFGKNDYGQLGIDTMENQLAPVQV----RGGLERQECLEIRCGYYHTIALCSGAHLF 830

Query: 347 TWGKGYCGALGHGDEIDKTL------------PEPLSSLKSHLAVQVCARKRKTFVLVDT 394
            +G+   G LG G     +                +  L+    V++      T  + D 
Sbjct: 831 AFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDN 890

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           G +Y FG    G LG    G + + + P  +D      V+ ++ G YHTVV+T
Sbjct: 891 GVMYVFGRNNHGQLG---TGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVLT 940



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 135/309 (43%), Gaps = 21/309 (6%)

Query: 100 VEHSSDIVETSAGN-QMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR 157
           V H S+I +  +G+ Q     G  HT+L+S +  V +CG +  G LGHG  T++ V   +
Sbjct: 635 VSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVP--K 692

Query: 158 INFPSAAHVVQ-VSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDT-NRPIFRPRLVE 212
           I       +V+ VS S  H     + G +   +T G N     GH D+ +R I  P+ VE
Sbjct: 693 IIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVE 750

Query: 213 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           AL       V  G   T  +T  G     G N +GQLG     ++  P  +    E    
Sbjct: 751 ALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQEC 810

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------ELQPRAIQTFRR----K 322
           ++I  G  + +A+     +++FG      LG G  +       +LQ +     R     +
Sbjct: 811 LEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELE 870

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G  +VR++ G  H +A+  +G +Y +G+   G LG GD  ++  P P+          V 
Sbjct: 871 GKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVA 930

Query: 383 ARKRKTFVL 391
           A    T VL
Sbjct: 931 AGFYHTVVL 939


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 133/246 (54%), Gaps = 8/246 (3%)

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYS 293
             G ++ CG  T+G+LG G + + P P+ I  L + V   V + +G  + +A+T +G V+S
Sbjct: 2106 EGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFS 2165

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            +G G +  LGHG + +  +P+ I+  R K I    ++ G  H  A+ SSG +YTWG G  
Sbjct: 2166 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--DIACGSSHSAAITSSGELYTWGLGEY 2223

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
            G LGHGD I +  P+ + SL  H  VQV   +R  +T  L D G V+ +G   FG LG  
Sbjct: 2224 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLG-- 2281

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
             RG S+    P  ++ L A  V QI  G   ++ +T  G ++ +G  +  +LGH + +  
Sbjct: 2282 -RGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 2340

Query: 472  LEPTEI 477
             +PT I
Sbjct: 2341 RKPTVI 2346



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 154/315 (48%), Gaps = 15/315 (4%)

Query: 159  NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKG 216
            +F S    + ++        V   G+++ CG+  N     GH + N P   PR +  L  
Sbjct: 2083 DFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSN-NVPY--PRPIPFLSQ 2139

Query: 217  VPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
               K+V   +G      LT+ G V + G    G+LGHG+ L+   PK I  L     +  
Sbjct: 2140 YVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRS-KKIRD 2198

Query: 275  IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-- 332
            IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ I++    G  +V+V+ G  
Sbjct: 2199 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSL--VGHRIVQVACGSR 2256

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D   +AL   G+V++WG G  G LG G      +P  +  L +   VQ+    + +  L 
Sbjct: 2257 DAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALT 2316

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
             TG V+ +G   +  LG    G    V +P +++SL+   V  ++ G  H + VTD G++
Sbjct: 2317 KTGEVWTWGKGDYFRLG---HGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQV 2373

Query: 453  FGFGDNERAQLGHDT 467
            + +GDN+  Q G+ T
Sbjct: 2374 YAWGDNDHGQQGNGT 2388



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 151/315 (47%), Gaps = 7/315 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            S    VQ+   E     V   G+V+  G  +    G   T+  +  P L+E+++ V  K+
Sbjct: 3062 STLRPVQLVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VLVPTLLESIQHVFIKK 3120

Query: 222  --VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
              V +G      L+    V++ G    G+LGHG+ L   TPK I  L+    ++ IA G 
Sbjct: 3121 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGY-EIIDIACGG 3179

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            ++  A+T  G +Y++G G    LGHG+  D+L+P+ I+      +  V   +GD   + +
Sbjct: 3180 AHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 3239

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                 V++WG G  G LG G      +P+ + SL     ++V    + +  L  +GSVY 
Sbjct: 3240 TDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYT 3299

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G  + V RP+ + +L+   +  I+TG  H V  +D G +F +GDN+
Sbjct: 3300 WGKGDYHRLG---HGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDND 3356

Query: 460  RAQLGHDTLRGCLEP 474
              QLG DT      P
Sbjct: 3357 EGQLGDDTTNAIQRP 3371



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 155/323 (47%), Gaps = 18/323 (5%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE--NHAAFVLQSGQVFTC 188
            +++CG    G LG G      V + R I F S   + +V+      HA  +   G+VF+ 
Sbjct: 2109 LYACGEGTNGRLGLGHSNN--VPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 2166

Query: 189  GDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G+      GH   NR  + +P+++EAL+    + +  G + +  +T  G ++T G   +G
Sbjct: 2167 GEGEDGKLGH--GNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYG 2224

Query: 248  QLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGH 304
            +LGHGD + +  PK I  L  VG  +VQ+A G   +  LA+T  G V+S+G G    LG 
Sbjct: 2225 RLGHGDNITQLKPKLIKSL--VGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGR 2282

Query: 305  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
            G       P  I+  R   + VV++  G +  +AL  +G V+TWGKG    LGHG +   
Sbjct: 2283 GGSEGCNIPHNIE--RLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV 2340

Query: 365  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
              P  + SLK    + V         + DTG VY +G    G  G    G +    +P +
Sbjct: 2341 RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGTTIVNRKPAL 2397

Query: 425  LDSLRAHHVSQISTGLYHTVVVT 447
            +  L   H+++++ G  H++  T
Sbjct: 2398 VHGLEDVHINRVACGSSHSIAWT 2420



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 137/282 (48%), Gaps = 13/282 (4%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAG 225
            + V++   H   +     V++ G+      GH   NR     P+L+EAL+G     +  G
Sbjct: 3121 IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH--GNRLACETPKLIEALQGYEIIDIACG 3178

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIA--AGPSYM 282
               +  +T  G ++T G   +G+LGHGD+ D+  PK I  L  VG  V+ +A  +G +  
Sbjct: 3179 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEEL--VGYKVIDVACGSGDAQT 3236

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            L +T +  V+S+G G    LG G       P+ I++    G+ V++V  G +  VAL  S
Sbjct: 3237 LCITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESL--AGLGVIKVECGSQFSVALTRS 3294

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            G VYTWGKG    LGHG       P+ +++L+    + +           D G V+ +G 
Sbjct: 3295 GSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGD 3354

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               G LG      ++ + RPR++ +L+   ++ ++ G  HT+
Sbjct: 3355 NDEGQLG---DDTTNAIQRPRLVSALQGKKITNVACGSAHTL 3393



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 5/207 (2%)

Query: 273  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            + IA G   +  V+  G +Y+ G G+N  LG G  ++   PR I    +  I  V V +G
Sbjct: 2091 IHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSG 2150

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
             +H +AL   G V++WG+G  G LGHG+ ++   P+ + +L+S     +      +  + 
Sbjct: 2151 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAIT 2210

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRG 450
             +G +Y +G   +G LG  D       L+P+++ SL  H + Q++ G     T+ +TD G
Sbjct: 2211 SSGELYTWGLGEYGRLGHGDNITQ---LKPKLIKSLVGHRIVQVACGSRDAQTLALTDEG 2267

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +F +GD +  +LG     GC  P  I
Sbjct: 2268 WVFSWGDGDFGKLGRGGSEGCNIPHNI 2294



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP ++++ L  V    Q+  G   + AVT +G VY
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPV----QLVGGEQTLFAVTADGKVY 3086

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G     L P  +++ +   I  + V++G +H +AL +   VY+WG+G 
Sbjct: 3087 ATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3146

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+ +    P+ + +L+ +  + +      +  +  TG +Y +G   +G LG  D
Sbjct: 3147 DGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD 3206

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P++++ L  + V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3207 ---SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 3263

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 3264 CKVPKKI 3270



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 21/257 (8%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 172
            G++   L  +  VFS G    G LGHG       P+  + +   +I          ++  
Sbjct: 2151 GKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIR--------DIACG 2202

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 230
             +H+A +  SG+++T G       GH D N    +P+L+++L G    QV  G     T 
Sbjct: 2203 SSHSAAITSSGELYTWGLGEYGRLGHGD-NITQLKPKLIKSLVGHRIVQVACGSRDAQTL 2261

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             LT  G V + G    G+LG G +     P +I  L  +  VVQI  G  + LA+T  G 
Sbjct: 2262 ALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNAL-EVVQIECGAQFSLALTKTGE 2320

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            V+++G G  F LGHG      +P  I++ + K   V+ V+ G  H +A+  +G VY WG 
Sbjct: 2321 VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK--KVIHVAVGALHCLAVTDTGQVYAWGD 2378

Query: 351  GYCGALGHGDEIDKTLP 367
               G  G+G  I    P
Sbjct: 2379 NDHGQQGNGTTIVNRKP 2395



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 19/292 (6%)

Query: 114  QMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
            ++ + +G  H L +S ++ V+S G    G LGHG     C +   I       ++ ++  
Sbjct: 3120 KIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLA-CETPKLIEALQGYEIIDIACG 3178

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
              H+A +  +GQ++T G       GH D+   + +P+L+E L G     V  G      L
Sbjct: 3179 GAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQL-KPKLIEELVGYKVIDVACGSGDAQTL 3237

Query: 233  TIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             I    +V + G   +G+LG G +     PK I  L  +G V+++  G  + +A+T +G 
Sbjct: 3238 CITDDDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLG-VIKVECGSQFSVALTRSGS 3296

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA    G V+TWG 
Sbjct: 3297 VYTWGKGDYHRLGHGTGEHVRRPKKVAAL--QGKKIISIATGSLHCVACSDEGEVFTWGD 3354

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
               G L  GD+    +  P           V A + K    V  GS +   W
Sbjct: 3355 NDEGQL--GDDTTNAIQRPR---------LVSALQGKKITNVACGSAHTLAW 3395



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F +   G VY   
Sbjct: 3030 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYA-- 3087

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
              G+G+ G    G +D VL P +L+S++   + +I+  +G  H + ++    ++ +G+ +
Sbjct: 3088 -TGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGD 3146

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LGH     C  P  I
Sbjct: 3147 DGKLGHGNRLACETPKLI 3164


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHVREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL S G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALASDGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG   +G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSYGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHVREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSYGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 141/279 (50%), Gaps = 14/279 (5%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPK 261
           P+F PR      G   K++  G   + FL   G V+TCGSN+ GQLGH    ++P  TP+
Sbjct: 20  PMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGH----NKPGITPE 75

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 320
            +  L+    +  ++ G ++ LAV   G V+++G+G    LG G     ++ PR I+  R
Sbjct: 76  FVGALD-TQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIK--R 132

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAV 379
                + +V  G++H +AL   G ++TWG+   G LG G  E  K  P+PL SL      
Sbjct: 133 LCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLA 192

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
           ++ A    +F L  +G+V+G+G    G LG  D  + D+ + P  +  LR+  V  IS G
Sbjct: 193 KITAGGDHSFALSLSGAVFGWGKNKAGQLGLND--IQDRAV-PCHIKFLRSQKVVHISCG 249

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
             HT  +T  G LF FGD    QLGH +    L P  + 
Sbjct: 250 EEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVL 288



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 158/342 (46%), Gaps = 12/342 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G +  G LG G E          N  +   + ++     H+ F+L  G V+TCG NS   
Sbjct: 5   GKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNS--- 61

Query: 196 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 255
           CG    N+P   P  V AL       V+ G   +  +  +G V   G+   GQLG G T 
Sbjct: 62  CGQLGHNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTE 121

Query: 256 DRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQP 313
                P+ I  L +   + Q+  G  + +A++ +G ++++G  ++  LG G+ +  +L P
Sbjct: 122 TAVRIPRLIKRLCD-HRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFP 180

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
           + +++    GI + +++AG +H  AL  SG V+ WGK   G LG  D  D+ +P  +  L
Sbjct: 181 QPLKSL--AGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFL 238

Query: 374 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
           +S   V +   +  T  L   G ++ FG   +G LG    G +   L PR +  L    V
Sbjct: 239 RSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLG---HGSTANELLPRRVLELMGTEV 295

Query: 434 SQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRGCLEP 474
           SQI+ G +HT+      G ++ FG N   QLG   L     P
Sbjct: 296 SQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVLSADKSP 337



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 137/311 (44%), Gaps = 20/311 (6%)

Query: 107 VETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFP 161
           V T  G +  +  G++   L+ + SV++CGS+ CG LGH      PE    +   +I   
Sbjct: 29  VFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNKPGITPEFVGALDTQKITL- 87

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
                  VS  + H+  V + GQVF  G       G   T   +  PRL++ L      Q
Sbjct: 88  -------VSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQ 140

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGP 279
           V  G      L+  G + T G NT GQLG G     P+     PL+ +  +   +I AG 
Sbjct: 141 VMCGNQHCIALSKDGQLFTWGQNTSGQLGLGK--GEPSKLFPQPLKSLAGIPLAKITAGG 198

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            +  A++ +G V+ +G      LG  +  D   P  I+  R +   VV +S G+EH  AL
Sbjct: 199 DHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQ--KVVHISCGEEHTAAL 256

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVY 398
              G ++T+G G  G LGHG   ++ LP  +  L      Q+ C R         +G VY
Sbjct: 257 TKDGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVY 316

Query: 399 GFGWMGFGSLG 409
            FG    G LG
Sbjct: 317 AFGCNSHGQLG 327



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 7/259 (2%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 174
           ++ G+ H+L ++    VF+ G+   G LG G  T   V   R+      H + QV     
Sbjct: 88  VSCGQAHSLAVNEQGQVFAWGAGEEGQLGLG-TTETAVRIPRLIKRLCDHRIAQVMCGNQ 146

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   + + GQ+FT G N+S   G          P+ +++L G+P  ++TAG + +  L++
Sbjct: 147 HCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSL 206

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQLG  D  DR  P  I  L     VV I+ G  +  A+T +G +++F
Sbjct: 207 SGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRS-QKVVHISCGEEHTAALTKDGGLFTF 265

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYC 353
           G GS   LGHG   +EL PR +      G  V +++ G  H +A   SSG VY +G    
Sbjct: 266 GDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSH 323

Query: 354 GALGHGDEIDKTLPEPLSS 372
           G LG G       P PL +
Sbjct: 324 GQLGTGVLSADKSPYPLKT 342



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 11/234 (4%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  H + +S +  +F+ G +  G LG G      +    +   +   + +++A  +
Sbjct: 140 QVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGD 199

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           H+  +  SG VF  G N +   G  D  +R +  P  ++ L+      ++ G   T  LT
Sbjct: 200 HSFALSLSGAVFGWGKNKAGQLGLNDIQDRAV--PCHIKFLRSQKVVHISCGEEHTAALT 257

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT-GNGVV 291
             G + T G  + GQLGHG T +   P+ +  LE +G+ V QI  G  + LA    +G V
Sbjct: 258 KDGGLFTFGDGSWGQLGHGSTANELLPRRV--LELMGTEVSQITCGRHHTLAFAPSSGGV 315

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQT-FRRKGIH--VVRVSAGDEHVVALDSS 342
           Y+FG  S+  LG G    +  P  ++T F    IH  V +++ G +H   L S+
Sbjct: 316 YAFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSN 369


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 25/360 (6%)

Query: 126 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGK 60

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+ CG N     GH   + P  RP L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGH---DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 299 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
              LG     D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPKDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG  DE ++  P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 138/301 (45%), Gaps = 15/301 (4%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  HTL L +N  V++CGS+    LGH   T + +    +       ++Q+S    
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTKRPLLIPELQ---DYVIIQISCGSR 100

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  +   GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 292 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 408
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335

Query: 409 G 409
           G
Sbjct: 336 G 336



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 112/244 (45%), Gaps = 8/244 (3%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T NG VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVEQVACGHRHTLFLTANGKVYAC 64

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           GS  +  LGH    D    R +     +   ++++S G  H +AL   G V +WG   CG
Sbjct: 65  GSNDHSQLGH----DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 355 ALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LGH  D+    LP+ +  L S   VQ+      +  L   G +Y +G   +G LG    
Sbjct: 121 QLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSP 180

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                   P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +       
Sbjct: 181 KDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY 240

Query: 474 PTEI 477
           PT++
Sbjct: 241 PTQL 244



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 120/261 (45%), Gaps = 13/261 (4%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI+ G  H+L +S+   V S G + CG LGH  +         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGN 152

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 228
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 347
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYA 326

Query: 348 WGKGYCGALGHGDEIDKTLPE 368
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 171
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 206 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAY--PTQLKTLRTLGVRFVACGDEFSV 263

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 288
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 264 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 321

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAI 316
           G VY+FG GS+  LG       + P+ +
Sbjct: 322 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 148/324 (45%), Gaps = 18/324 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H A V + G+VFT G+      GH   +R   RP LVE L       V  G
Sbjct: 268 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGH-GIDRDFSRPHLVEFLAVSHVDFVACG 326

Query: 226 LNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T    ++T G      G LGHG  +    PK +    E   V+ +A G  +  
Sbjct: 327 EYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSA 386

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 339
             T NG +Y+FG G+   LGHG++   + PR +Q     G+  ++V+ G  H  A+    
Sbjct: 387 LATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL--SGLRTIKVACGVWHTAAIVEVM 444

Query: 340 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  
Sbjct: 445 SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTT 504

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +G V+  G   +G LG P    SD V+   + D L    V +IS G YHTVV+T R  +F
Sbjct: 505 SGHVFTMGGTAYGQLGNPS---SDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVF 561

Query: 454 GFGDNERAQLGHDTLRGCLEPTEI 477
            +G     +LGH  +     PT I
Sbjct: 562 SWGRGSNGRLGHGDVEDRKAPTLI 585



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 28/349 (8%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 170
            QI  G  H  L++    VF+ G    G LGHG +      F+R   + F + +HV  V+
Sbjct: 269 QQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDR----DFSRPHLVEFLAVSHVDFVA 324

Query: 171 ASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
             E H   +  S  ++T GD   +S   GH          R+V +L+G+    V  G   
Sbjct: 325 CGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWH 384

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV--- 285
           +   T  G ++T G  T+G LGHGD      P+ +  L  +   +++A G  +  A+   
Sbjct: 385 SALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGL-RTIKVACGVWHTAAIVEV 443

Query: 286 ---TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
              TG+ +    ++++G G  + LGHG +   L P  + +      H  +++ G    VA
Sbjct: 444 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH--QLACGHNMTVA 501

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSV 397
           L +SG+V+T G    G LG+    D  +P  +   L      ++      T VL     V
Sbjct: 502 LTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEV 560

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           + +G    G LG  D  V D+   P ++++L+  HV  IS G   T  +
Sbjct: 561 FSWGRGSNGRLGHGD--VEDRKA-PTLIEALKDRHVKSISCGSNFTASI 606



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 6/173 (3%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           ++D L P+ ++T     + V +++ G  H+  +   G V+TWG+   G LGHG + D + 
Sbjct: 251 KNDVLTPKPLET--NVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSR 308

Query: 367 PEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RI 424
           P  +  L  SH+    C  +  T  +  +  +Y +G   F S G    G       P R+
Sbjct: 309 PHLVEFLAVSHVDFVACG-EYHTCAITSSNDLYTWGDGIFNS-GILGHGTDISHWIPKRV 366

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           + SL    V  ++ G +H+ + T  G+L+ FGD     LGH      + P E+
Sbjct: 367 VGSLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREV 419



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 24/204 (11%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLI-----------SNSSVFSCGSSLCGVLGHG 146
           +SV +  ++   S    +++  G +HT  I           S+  +F+ G      LGHG
Sbjct: 411 ESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHG 470

Query: 147 PETT----QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 202
            + T     CVS + I++    +  Q++   N    +  SG VFT G  +    G+  ++
Sbjct: 471 NKETYLLPTCVS-SLIDY----NFHQLACGHNMTVALTTSGHVFTMGGTAYGQLGNPSSD 525

Query: 203 RPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
             I  P LV+  L G   ++++ G   T  LT R  V + G  ++G+LGHGD  DR  P 
Sbjct: 526 GVI--PCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPT 583

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAV 285
            I  L++   V  I+ G ++  ++
Sbjct: 584 LIEALKDR-HVKSISCGSNFTASI 606


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 153/315 (48%), Gaps = 22/315 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+LV+ LK    + V  G
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGH-GVDSDVLHPKLVDGLKNTNVELVACG 365

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
              +  +T+ G ++T G ++H  G LG+ +      PK +  PLE +  V  ++ GP + 
Sbjct: 366 EYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGI-HVAAVSCGPWHT 424

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT +G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 425 AVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESL--KGLRTVRAACGVWHTAAVVEV 482

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 483 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVA 542

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  TG VY  G   +G LG P    +D  L  R+   L  + V ++  G YH  V+T R 
Sbjct: 543 LTTTGHVYTMGSPVYGQLGNPQ---ADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRT 599

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G     +LGH
Sbjct: 600 EVYTWGKGANGRLGH 614



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 130/274 (47%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YH+  ++ S  +++ G S   CG+LG+  E +  V   ++N P    HV  VS  
Sbjct: 362 VACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVP-KKLNGPLEGIHVAAVSCG 420

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  SGQ+FT GD +    GH D  R +  PR VE+LKG+   +   G+  T  +
Sbjct: 421 PWHTAVVTSSGQLFTFGDGTFGVLGHGD-RRSVSTPREVESLKGLRTVRAACGVWHTAAV 479

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 480 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEP-NFCQVACGHS 538

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T  G VY+ GS     LG+ +   +L  R      +    V  +  G  HV  L 
Sbjct: 539 MTVALTTTGHVYTMGSPVYGQLGNPQADGKLPVRVEGKLSKN--FVEELDCGAYHVAVLT 596

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  D++ P  + +LK
Sbjct: 597 SRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALK 630



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 150/346 (43%), Gaps = 24/346 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  GR H  L++    VFS G  L G LGHG + +  +    ++     +V  V+  E H
Sbjct: 310 IACGRRHAALVTKQGEVFSWGEELGGRLGHGVD-SDVLHPKLVDGLKNTNVELVACGEYH 368

Query: 176 AAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +  V  SG ++T G +S  C   G+R+        +L   L+G+    V+ G   T  +T
Sbjct: 369 SCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVT 428

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSY 281
             G + T G  T G LGHGD     TP+ +  L+               +VV++  G S 
Sbjct: 429 SSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVG-SS 487

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
             +   +G ++++G G    LGHG++   L P  +        +  +V+ G    VAL +
Sbjct: 488 SSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEP--NFCQVACGHSMTVALTT 545

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           +G+VYT G    G LG+  + D  LP  +   L  +   ++        VL     VY +
Sbjct: 546 TGHVYTMGSPVYGQLGN-PQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTW 604

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           G    G LG  D   +D    P I+++L+   V  +  G   T  +
Sbjct: 605 GKGANGRLGHGD---TDDRSSPTIVEALKDKQVKSVVCGTSFTAAI 647



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 27/299 (9%)

Query: 206 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D   PK +  
Sbjct: 294 FVPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDG 353

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKG 323
           L+   +V  +A G  +  AVT +G +Y++G  S+ C  LG+  +     P+ +     +G
Sbjct: 354 LKNT-NVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNG-PLEG 411

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           IHV  VS G  H   + SSG ++T+G G  G LGHGD    + P  + SLK    V+   
Sbjct: 412 IHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAAC 471

Query: 384 RKRKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
               T  +V+             G ++ +G    G LG  D+   +  L P  + +L   
Sbjct: 472 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDK---ESRLVPTCVAALVEP 528

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEME 483
           +  Q++ G   TV +T  G ++  G     QLG+    G L P  +       F++E++
Sbjct: 529 NFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADGKL-PVRVEGKLSKNFVEELD 586



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 6/171 (3%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D   P+A+++     + V  ++ G  H   +   G V++WG+   G LGHG + D   P+
Sbjct: 292 DSFVPKALESAVL--LDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPK 349

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF--GSLGFPDRGVSDKVLRPRILD 426
            +  LK+     V   +  +  +  +G +Y +G      G LG+  R  +   +  ++  
Sbjct: 350 LVDGLKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGY--RNEASNWVPKKLNG 407

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            L   HV+ +S G +HT VVT  G+LF FGD     LGH   R    P E+
Sbjct: 408 PLEGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREV 458



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 15/196 (7%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGHG + ++
Sbjct: 465 RTVRAACGVWHTAAVVE--------VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESR 516

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPR 209
            V  T +      +  QV+   +    +  +G V+T G       G+   D   P+   R
Sbjct: 517 LVP-TCVAALVEPNFCQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADGKLPV---R 572

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           +   L     +++  G      LT R  V+T G   +G+LGHGDT DR +P  +  L++ 
Sbjct: 573 VEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKD- 631

Query: 270 GSVVQIAAGPSYMLAV 285
             V  +  G S+  A+
Sbjct: 632 KQVKSVVCGTSFTAAI 647



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 14/127 (11%)

Query: 340 DSSGYVYTWGKGYCGALGHGD---------EIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           D+ G VY WG+G  G +  G            D  +P+ L S    L VQ  A  R+   
Sbjct: 260 DALGDVYIWGEGTAGGILGGGMNGVGGSGVRTDSFVPKALESA-VLLDVQTIACGRRHAA 318

Query: 391 LV-DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
           LV   G V+ +G    G LG    GV   VL P+++D L+  +V  ++ G YH+  VT  
Sbjct: 319 LVTKQGEVFSWGEELGGRLGH---GVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVTLS 375

Query: 450 GRLFGFG 456
           G L+ +G
Sbjct: 376 GDLYTWG 382


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGHG   ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHGREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G +   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 152/320 (47%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGHG E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G D   + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKDFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHRGQLS 353



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G+    +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 22/315 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L+++L     + V  G
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGH-GVDSDVLHPKLIDSLSNTNIELVACG 372

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 373 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 431

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 340
             VT +G +++FG G+   LGHG+     +PR +++   KG   V  + G  H  A+   
Sbjct: 432 AVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESL--KGHRTVISACGVWHTAAVVEI 489

Query: 341 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G  G LGHGD+  K +P  +++L      +V      T  
Sbjct: 490 MVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVA 549

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  +G VY  G   +G LG P    +D  L  R+   L    V +I+ G YH  V+T R 
Sbjct: 550 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRT 606

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G     +LGH
Sbjct: 607 EVYTWGKGANGRLGH 621



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 134/291 (46%), Gaps = 21/291 (7%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 156
           V H   I   S  N   +  G YHT  ++ S     +  G+   G+LGHG E +  V   
Sbjct: 352 VLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-K 410

Query: 157 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH DT + + +PR VE+LK
Sbjct: 411 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDT-KSVSKPREVESLK 469

Query: 216 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           G        G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 470 GHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 529

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           A L +  +  ++A G S  +A+T +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 530 AALVDP-NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKS- 587

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 588 -FVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 637



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 149/343 (43%), Gaps = 25/343 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+  L+     +FS G    G LGHG ++   +    I+  S  ++  V+  E H   V
Sbjct: 321 GRHAALVTKQGEIFSWGEESGGRLGHGVDS-DVLHPKLIDSLSNTNIELVACGEYHTCAV 379

Query: 180 LQSGQVFTCGDNS-SF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             SG ++T GD + +F   GH +        R+   L+G+    ++ G   T  +T  G 
Sbjct: 380 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQ 439

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAG-PSYMLA 284
           + T G  T G LGHGDT     P+ +  L+               +VV+I  G PS   +
Sbjct: 440 LFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSS--S 497

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
              +G ++++G G    LGHG++  +L P  +        +  RV+ G    VAL +SG+
Sbjct: 498 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VDPNFCRVACGHSLTVALTTSGH 555

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
           VYT G    G LG+  + D  LP  +   L      ++        VL     VY +G  
Sbjct: 556 VYTMGSPVYGQLGN-PQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKG 614

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
             G LG  D   +D    P ++++L+   V  I+ G   T  +
Sbjct: 615 ANGRLGHGD---TDDRNSPTLVEALKDKQVKSIACGTNFTATI 654



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 27/296 (9%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLS 362

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 363 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 420

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + SSG ++T+G G  G LGHGD    + P  + SLK H  V      
Sbjct: 421 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGV 480

Query: 386 RKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+            +G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 481 WHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVDPNF 537

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 482
            +++ G   TV +T  G ++  G     QLG+    G L PT +       F++E+
Sbjct: 538 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PTRVEGKLAKSFVEEI 592



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 104/225 (46%), Gaps = 18/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SEN 174
           I+ G +HT ++++S  +F+ G    GVLGHG   T+ VS  R       H   +SA    
Sbjct: 424 ISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DTKSVSKPREVESLKGHRTVISACGVW 481

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D    +  P  V AL      +V
Sbjct: 482 HTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVDPNFCRV 540

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 541 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPTRVEGKLAKSFVEEIACGAYHV 599

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 600 AVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSI 644



 Score = 39.7 bits (91), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQ 184
           L ++  V++ GS + G LG+ P+    +  TR+    A   V+ ++    H A +    +
Sbjct: 550 LTTSGHVYTMGSPVYGQLGN-PQADGKLP-TRVEGKLAKSFVEEIACGAYHVAVLTSRTE 607

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           V+T G  ++   GH DT+     P LVEALK    K +  G NFT  + +   V
Sbjct: 608 VYTWGKGANGRLGHGDTD-DRNSPTLVEALKDKQVKSIACGTNFTATICLHKWV 660


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 166/360 (46%), Gaps = 25/360 (6%)

Query: 126 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGK 60

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+ CG N     GH     P  RP L+  L+     Q++ G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGHE---LPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
             GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS  
Sbjct: 118 DCGQLGHA------TDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171

Query: 299 NFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
              LG     D      P  + T    GI +  ++ G  H   +  SG V+ WG+  CG 
Sbjct: 172 YGQLGVNSPKDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG  DE ++  P  L +L++     V      +  L + G V+  G   +G LG    G 
Sbjct: 230 LGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGF 286

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  + P
Sbjct: 287 SSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLP 346



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 139/301 (46%), Gaps = 15/301 (4%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  HTL L +N  V++CGS+    LGH   T + +    +       V+Q+S    
Sbjct: 44  QVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTKRPLLIPELQ---DYVVIQISCGSR 100

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  + + GQV + GDN     GH      +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTS 160

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G +++ GSN +GQLG     D      P  +  L  +  +  IA G ++   ++ +G V
Sbjct: 161 CGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGI-PLAAIACGGNHSFLISKSGAV 219

Query: 292 YSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+T G
Sbjct: 220 --FGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVFTCG 275

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 408
            G  G LGHG   ++ LP  +  L      QV    R T  LV + G VY FG    G L
Sbjct: 276 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 335

Query: 409 G 409
           G
Sbjct: 336 G 336



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 10/245 (4%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T NG VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTANGKVYAC 64

Query: 295 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           GS  +  LGH     EL   R +     +   V+++S G  H +AL   G V +WG   C
Sbjct: 65  GSNDHSQLGH-----ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDC 119

Query: 354 GALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
           G LGH  D+    LP+ +  L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNS 179

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                    P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +      
Sbjct: 180 PKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRA 239

Query: 473 EPTEI 477
            PT++
Sbjct: 240 YPTQL 244



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 13/261 (4%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI+ G  H+L +S    V S G + CG LGH  +         +    +  VVQ++   
Sbjct: 93  IQISCGSRHSLALSEWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGN 152

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGLNF 228
           NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G N 
Sbjct: 153 NHSLALTSCGELYSWGSN---IYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNH 209

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T  
Sbjct: 210 SFLISKSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLG-VRFVACGDEFSVFLTNE 268

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYT 347
           G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G VY 
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRVYA 326

Query: 348 WGKGYCGALGHGDEIDKTLPE 368
           +G G  G LG        LP+
Sbjct: 327 FGLGSSGQLGTRSTKSLMLPQ 347



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 12/209 (5%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 171
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 146 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIAC 205

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFT 229
             NH+  + +SG VF  G N+   CG    N    R  P  ++ L+ +  + V  G  F+
Sbjct: 206 GGNHSFLISKSGAVFGWGRNN---CGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFS 262

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTG 287
            FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V  
Sbjct: 263 VFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPS 320

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAI 316
            G VY+FG GS+  LG       + P+ +
Sbjct: 321 RGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 148/324 (45%), Gaps = 18/324 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H A V + G+VFT G+      GH   +R   RP LVE L       V  G
Sbjct: 130 VQQIACGVRHIALVTRQGEVFTWGEECGGRLGH-GIDRDFSRPHLVEFLAVSHVDFVACG 188

Query: 226 LNFTGFLTIRGHVHTCGSN--THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T    ++T G      G LGHG  +    PK +    E   V+ +A G  +  
Sbjct: 189 EYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSA 248

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 339
             T NG +Y+FG G+   LGHG++   + PR +Q     G+  ++V+ G  H  A+    
Sbjct: 249 LATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLL--SGLRTIKVACGVWHTAAIVEVM 306

Query: 340 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  
Sbjct: 307 SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTT 366

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +G V+  G   +G LG P    SD V+   + D L    V +IS G YHTVV+T R  +F
Sbjct: 367 SGHVFTMGGTAYGQLGNPS---SDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVF 423

Query: 454 GFGDNERAQLGHDTLRGCLEPTEI 477
            +G     +LGH  +     PT I
Sbjct: 424 SWGRGSNGRLGHGDVEDRKAPTLI 447



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 28/349 (8%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 170
            QI  G  H  L++    VF+ G    G LGHG +      F+R   + F + +HV  V+
Sbjct: 131 QQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDR----DFSRPHLVEFLAVSHVDFVA 186

Query: 171 ASENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
             E H   +  S  ++T GD   +S   GH          R+V +L+G+    V  G   
Sbjct: 187 CGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWH 246

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV--- 285
           +   T  G ++T G  T+G LGHGD      P+ +  L  +   +++A G  +  A+   
Sbjct: 247 SALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGL-RTIKVACGVWHTAAIVEV 305

Query: 286 ---TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
              TG+ +    ++++G G  + LGHG +   L P  + +      H  +++ G    VA
Sbjct: 306 MSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH--QLACGHNMTVA 363

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSV 397
           L +SG+V+T G    G LG+    D  +P  +   L      ++      T VL     V
Sbjct: 364 LTTSGHVFTMGGTAYGQLGNPSS-DGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEV 422

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           + +G    G LG  D  V D+   P ++++L+  HV  IS G   T  +
Sbjct: 423 FSWGRGSNGRLGHGD--VEDRKA-PTLIEALKDRHVKSISCGSNFTASI 468



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 6/173 (3%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           ++D L P+ ++T     + V +++ G  H+  +   G V+TWG+   G LGHG + D + 
Sbjct: 113 KNDVLTPKPLET--NVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSR 170

Query: 367 PEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RI 424
           P  +  L  SH+    C  +  T  +  +  +Y +G   F S G    G       P R+
Sbjct: 171 PHLVEFLAVSHVDFVACG-EYHTCAITSSNDLYTWGDGIFNS-GILGHGTDISHWIPKRV 228

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           + SL    V  ++ G +H+ + T  G+L+ FGD     LGH      + P E+
Sbjct: 229 VGSLEGLQVLSVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREV 281



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 24/204 (11%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLI-----------SNSSVFSCGSSLCGVLGHG 146
           +SV +  ++   S    +++  G +HT  I           S+  +F+ G      LGHG
Sbjct: 273 ESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHG 332

Query: 147 PETT----QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 202
            + T     CVS + I++    +  Q++   N    +  SG VFT G  +    G+  ++
Sbjct: 333 NKETYLLPTCVS-SLIDY----NFHQLACGHNMTVALTTSGHVFTMGGTAYGQLGNPSSD 387

Query: 203 RPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
             I  P LV+  L G   ++++ G   T  LT R  V + G  ++G+LGHGD  DR  P 
Sbjct: 388 GVI--PCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPT 445

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAV 285
            I  L++   V  I+ G ++  ++
Sbjct: 446 LIEALKDR-HVKSISCGSNFTASI 468


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 148/321 (46%), Gaps = 19/321 (5%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNS------SFCCGHRDTNRPIFRPRLVEALK 215
            +A   +++         V   G+VF CGD+S       FC         +  PR +  L 
Sbjct: 2624 TALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFC-------GKVSSPRQIPGLS 2676

Query: 216  GVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
                K V   +G      L++ G V + G    G+LGHGD L   TPK I  L     V 
Sbjct: 2677 QFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLL-AKRVF 2735

Query: 274  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
             IA G ++  A+T +G +Y++G G    LGH ++  +  P+ ++ F  K I  V   + D
Sbjct: 2736 YIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRD 2795

Query: 334  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
               +ALDS G VY+WG G  G LG G       P+ +  L  H  VQ+    + +  L  
Sbjct: 2796 AQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTA 2855

Query: 394  TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            TG V+ +G   +  LG    G  + V RP +++ L+   +  I+ G  H + V+ +G ++
Sbjct: 2856 TGQVWTWGKGEYYRLGL---GRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVY 2912

Query: 454  GFGDNERAQLGHDTLRGCLEP 474
             +GDN+  Q G+ T     EP
Sbjct: 2913 CWGDNDHGQQGNGTTNANQEP 2933



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 145/315 (46%), Gaps = 11/315 (3%)

Query: 168  QVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTA 224
            QV   E     V   G+V+  G   S   G   +   N  +  P+LV+ L  +    V +
Sbjct: 3581 QVIGGEQTMFAVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNS 3640

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            G      L+  G V+  G    G+LG G+ +    P+ +  L +   ++ IA G  +  A
Sbjct: 3641 GGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSD-KCIIDIACGGFHSAA 3699

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSS 342
            ++  G +Y++G G    LGHG+  D L P+ +Q       HVV+V+  +GD   + + S 
Sbjct: 3700 ISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLI--NYHVVKVACGSGDAQTMCVTSD 3757

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
              V++WG G  G LGH       LP  + SL     +Q+    + +  L   G++Y +G 
Sbjct: 3758 DNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGK 3817

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
              +  LG    G S+ V +P+ +  L+   + Q STG  H + +TD G ++ +GDN+  Q
Sbjct: 3818 GDYFRLG---HGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQ 3874

Query: 463  LGHDTLRGCLEPTEI 477
            LG  T      P  I
Sbjct: 3875 LGDGTAHPIARPRPI 3889



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 152/319 (47%), Gaps = 16/319 (5%)

Query: 132  VFSCGSSLCGVLGHGP---ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 188
            V++ G +  G LG GP   +    V+   +   +    V V++   H   +  +G+V+  
Sbjct: 3598 VYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAW 3657

Query: 189  GD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
            GD  +     G+R T+    +P+LV++L       +  G   +  ++  GH++T G   +
Sbjct: 3658 GDGDDGKLGLGNRVTHS---KPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRY 3714

Query: 247  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
            G+LGHGD  D   PK +  L     VV++A  +G +  + VT +  V+S+G G    LGH
Sbjct: 3715 GRLGHGDYEDYLYPKLVQGLINY-HVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGH 3773

Query: 305  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
                    P  I++   KGI  +++  G +  VAL ++G +YTWGKG    LGHG     
Sbjct: 3774 NISESCKLPCKIESLSGKGI--IQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHV 3831

Query: 365  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
              P+P+S L+    VQ          L D G VY +G    G LG    G +  + RPR 
Sbjct: 3832 RKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLG---DGTAHPIARPRP 3888

Query: 425  LDSLRAHHVSQISTGLYHT 443
            + +L+   + Q+S G  H+
Sbjct: 3889 IAALKGKRIQQVSCGSAHS 3907



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 8/261 (3%)

Query: 207  RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
            RP   EAL  +   ++  G      ++  G V  CG ++ G+LG        +P+ I  L
Sbjct: 2616 RPTFNEALTALKPIEIVGGSKSLFIVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGL 2675

Query: 267  EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
             + V   V + +G  + +A++ +G V S+G G +  LGHG+      P+ I +   K   
Sbjct: 2676 SQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAK--R 2733

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 383
            V  ++ G  H  A+ S G +YTWG+G  G LGH DE+ +  P+ +         QV   +
Sbjct: 2734 VFYIACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGS 2793

Query: 384  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
            R  +T  L   G+VY +G   FG LG   RG SD    P+ ++ L  H V QI  G   +
Sbjct: 2794 RDAQTLALDSEGNVYSWGDGDFGKLG---RGGSDGCCTPQKVERLVGHRVVQIECGAQFS 2850

Query: 444  VVVTDRGRLFGFGDNERAQLG 464
            V +T  G+++ +G  E  +LG
Sbjct: 2851 VALTATGQVWTWGKGEYYRLG 2871



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 151/360 (41%), Gaps = 21/360 (5%)

Query: 114  QMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
            ++ + +G  H L +S +  V++ G    G LG G   T       +   S   ++ ++  
Sbjct: 3635 KVAVNSGGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKP-QLVQSLSDKCIIDIACG 3693

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 230
              H+A + + G ++T G       GH D    ++ P+LV+ L      +V   +G   T 
Sbjct: 3694 GFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLY-PKLVQGLINYHVVKVACGSGDAQTM 3752

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             +T   +V + G   +G+LGH  +     P  I  L   G ++QI  G  + +A++ NG 
Sbjct: 3753 CVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKG-IIQIDCGSQFSVALSANGT 3811

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            +Y++G G  F LGHG      +P+ +   +  G  +V+ S G  HV+AL   G VY WG 
Sbjct: 3812 LYTWGKGDYFRLGHGSSEHVRKPKPVSGLQ--GKKIVQFSTGSLHVLALTDDGEVYAWGD 3869

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
               G LG G       P P+++LK     QV             GS + F W    +   
Sbjct: 3870 NDEGQLGDGTAHPIARPRPIAALKGKRIQQVSC-----------GSAHSFAWASEEACHT 3918

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             +   +   L   IL     H +      L+H   + ++  L       R ++  D +R 
Sbjct: 3919 DNSTPTTIPLEYDILQEFSVHELRNRLIFLHHFSTIINQTVLLFMPI--RGEISLDAIRS 3976



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 18/248 (7%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPTPK----SIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            V+  G N  GQLG  +G  + RPT      ++ P+E VG       G   +  V+  G V
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVG-------GSKSLFIVSNEGKV 2647

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            +  G  S   LG         PR I    +  I  V V +G +H +AL   G V +WG G
Sbjct: 2648 FVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDG 2707

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
              G LGHGD +    P+ + SL +     +      +  +   G +Y +G   +G LG  
Sbjct: 2708 EDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGRLGHS 2767

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLR 469
            D  VS     P+++      +++Q++ G     T+ +   G ++ +GD +  +LG     
Sbjct: 2768 DE-VSQHT--PKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSD 2824

Query: 470  GCLEPTEI 477
            GC  P ++
Sbjct: 2825 GCCTPQKV 2832



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 26/258 (10%)

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVG 270
           + +  VP K V         +T +G V++ G N  G LGHG      PTP+ I    ++ 
Sbjct: 487 KQMMNVPMKSVDVYDETYLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKL- 545

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            VV ++ G  +  AVT +G +Y +G     SN C           P  +++      HV 
Sbjct: 546 IVVMVSCGKDFCAAVTEDGKLYMWGKILHSSNCCY---------TPELVKSISE--WHVS 594

Query: 328 RVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           +VS G    + +AL   GYV+++ +      G  D+    +P  +  +  +  V +    
Sbjct: 595 KVSCGSSINNTLALSREGYVFSF-EYRNSDRGCDDKSLNVIPSMI--VFDYEIVSIYCHN 651

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
               V+    +V+ +G      LG  +   S +V RP+ +  L    V+ +S    + + 
Sbjct: 652 DVNAVIDCANNVFTWGRGNNNMLGHNN---SFRVNRPKEVKFLSGKQVTSLSLADDYILA 708

Query: 446 VTDRGRLFGFG--DNERA 461
           +TD G+++ +G  DNE  
Sbjct: 709 LTDTGQVYCWGQLDNENT 726



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 99/236 (41%), Gaps = 30/236 (12%)

Query: 117  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SEN 174
            I  G  H+  I S+  +++ G    G LGH  E +Q        F    ++ QV+  S +
Sbjct: 2737 IACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEF-VGKNITQVACGSRD 2795

Query: 175  HAAFVLQS-GQVFTCGDN---------SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
                 L S G V++ GD          S  CC           P+ VE L G    Q+  
Sbjct: 2796 AQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCT----------PQKVERLVGHRVVQIEC 2845

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G  F+  LT  G V T G   + +LG   G+ + RPT   +    ++ ++  IA G  + 
Sbjct: 2846 GAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRRPT---LVNQLKLVTIDHIAVGTLHC 2902

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +AV+  G VY +G   +   G+G  +   +PR +  F    I + RV  G    +A
Sbjct: 2903 IAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNFN--NIKINRVGCGSSQSIA 2956



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 25/228 (10%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           +LT++  VH   +  +     G      T K +    E   V  +    + +L VT +G 
Sbjct: 412 YLTLQRKVHEIKNKKNIVQYWGKQFYPETKKKVILTLERLHVESVVCSRNEILVVTTSGT 471

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           ++ F S S   L   E+            +   + +  V   DE  +A+   G VY+WG 
Sbjct: 472 LH-FISYSIDSLNFEEK------------QMMNVPMKSVDVYDETYLAVTQKGEVYSWGV 518

Query: 351 GYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
              GALGHG +      PEP+ +    + V V   K     + + G +Y +G +      
Sbjct: 519 NEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGKLYMWGKILHS--- 575

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTG--LYHTVVVTDRGRLFGF 455
                 S+    P ++ S+   HVS++S G  + +T+ ++  G +F F
Sbjct: 576 ------SNCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGYVFSF 617



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 11/137 (8%)

Query: 334  EHVVALDSSGYVYTWGKGYCGALG--HGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFV 390
            E  + +DS   VY WG    G LG  +G ++ + T  E L++LK    +++    +  F+
Sbjct: 2584 ESKIRVDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALK---PIEIVGGSKSLFI 2640

Query: 391  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD 448
            + + G V+  G    G LG P  G   KV  PR +  L    +  ++  +G  H + ++ 
Sbjct: 2641 VSNEGKVFVCGDSSGGRLGIPFCG---KVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSL 2697

Query: 449  RGRLFGFGDNERAQLGH 465
             G++  +GD E  +LGH
Sbjct: 2698 DGKVLSWGDGEDGKLGH 2714



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 7/188 (3%)

Query: 101  EHSSDIVETSAG-NQMQITTGRY--HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFT 156
            +H+  +V+   G N  Q+  G     TL L S  +V+S G    G LG G  +  C +  
Sbjct: 2772 QHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGG-SDGCCTPQ 2830

Query: 157  RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
            ++       VVQ+      +  +  +GQV+T G    +  G       + RP LV  LK 
Sbjct: 2831 KVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLG-LGRGEHVRRPTLVNQLKL 2889

Query: 217  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
            V    +  G      ++ +G V+  G N HGQ G+G T     P+ +     +  + ++ 
Sbjct: 2890 VTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNFNNI-KINRVG 2948

Query: 277  AGPSYMLA 284
             G S  +A
Sbjct: 2949 CGSSQSIA 2956



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 1/121 (0%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG  + G L   D      P    SL      QV   ++  F +   G VY  G+  
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTE 3605

Query: 405  FGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G LG  P    +  V+ P+++  L       +++G  H + ++  G ++ +GD +  +L
Sbjct: 3606 SGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKL 3665

Query: 464  G 464
            G
Sbjct: 3666 G 3666


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 156/324 (48%), Gaps = 23/324 (7%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           HAA V + G+VFT G+ S    GH    + + +PRLVE+L       V  G   T  +T+
Sbjct: 291 HAALVTRQGEVFTWGEESGGRLGH-GVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTM 349

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G ++T G  TH  G LGHG+ +    PK I+ PLE +  V  +  GP +   VT  G +
Sbjct: 350 AGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGL-QVASVTCGPWHTALVTSTGQL 408

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 340
           ++FG G+   LGHG++ +   PR +++    G+  +  + G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGDRENVAYPREVESL--SGLRTIAAACGVWHTAAVVEVIVTQSSSSI 466

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  L  +G V+  
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAM 526

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   +G LG P    +D  L   + D L    V +I+ G YH  V+T R  ++ +G    
Sbjct: 527 GSTVYGQLGNP---YADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 461 AQLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH  +     P  I ++ +++
Sbjct: 584 GRLGHGDIEDRKAP--ILVEALKD 605



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 127/282 (45%), Gaps = 21/282 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G +HT  ++ +     +  G+   G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 VACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIP-KRISGPLEGLQVASVTCG 395

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD +    GH D     + PR VE+L G+       G+  T  +
Sbjct: 396 PWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAY-PREVESLSGLRTIAAACGVWHTAAV 454

Query: 233 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 455 VEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-NFHKIACGHSL 513

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +T +G V++ GS     LG+     +L P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGHVFAMGSTVYGQLGNPYADGKL-PCLVED-KLSGESVEEIACGAYHVAVLTS 571

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDRHVKYIAC 613



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 149/347 (42%), Gaps = 36/347 (10%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 173
           R+  L+     VF+ G    G LGHG       P   + ++ + ++F        V+  E
Sbjct: 290 RHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDF--------VACGE 341

Query: 174 NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H   V  +G+++T GD  +++   GH +        R+   L+G+    VT G   T  
Sbjct: 342 FHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWHTAL 401

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 286
           +T  G + T G  T G LGHGD  +   P+ +  L  + ++   A G  +  AV      
Sbjct: 402 VTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIA-AACGVWHTAAVVEVIVT 460

Query: 287 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
                  +G ++++G G    LGHG++   L+P  +        H  +++ G    V L 
Sbjct: 461 QSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFH--KIACGHSLTVGLT 518

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYG 399
           +SG+V+  G    G LG+    D  LP  +    S  +V ++        VL     VY 
Sbjct: 519 TSGHVFAMGSTVYGQLGN-PYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYT 577

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           +G    G LG  D  + D+   P ++++L+  HV  I+ G  +T  +
Sbjct: 578 WGKGANGRLGHGD--IEDRKA-PILVEALKDRHVKYIACGANYTAAI 621



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 21/300 (7%)

Query: 201 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           T   +  PR +E+   +    +  G+     +T +G V T G  + G+LGHG   D   P
Sbjct: 264 TRADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 318
           + +  L  V +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I +
Sbjct: 324 RLVESL-AVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRI-S 381

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS 375
              +G+ V  V+ G  H   + S+G ++T+G G  G LGHGD  +   P   E LS L++
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRT 441

Query: 376 --------HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
                   H A  V     ++   + +G ++ +G      LG  D+   +  L+P  + +
Sbjct: 442 IAAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPA 498

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 484
           L  ++  +I+ G   TV +T  G +F  G     QLG+    G   CL   ++  + +EE
Sbjct: 499 LIDYNFHKIACGHSLTVGLTTSGHVFAMGSTVYGQLGNPYADGKLPCLVEDKLSGESVEE 558



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 19/236 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           +T G +HT L++++  +F+ G    GVLGHG    + V++ R +   S    +  +    
Sbjct: 392 VTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDR--ENVAYPREVESLSGLRTIAAACGVW 449

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 450 HTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 508

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  GHV   GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGHVFAMGSTVYGQLGN-PYADGKLPCLVEDKLSGESVEEIACGAYHVA 567

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            +T    VY++G G+N  LGHG+  D   P  ++  + +  HV  ++ G  +  A+
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDR--HVKYIACGANYTAAI 621


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 154/315 (48%), Gaps = 22/315 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G++F+ G+ S    GH   +  +  P+L++AL     + V  G
Sbjct: 312 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGH-GVDSDVMHPKLIDALSNTNIELVACG 370

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 371 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 429

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT  G +++FG G+   LGHG++     P+ +++   KG+  V+ + G  H  A+   
Sbjct: 430 AVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESL--KGLRTVQAACGVWHTAAVIEV 487

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G  G LGHGD+  K +P  +++L      QV      T  
Sbjct: 488 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVA 547

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
              +G VY  G   +G LG P   ++D  L  R+   L    V +I+ G YH  V+T + 
Sbjct: 548 RTTSGHVYTMGSPVYGQLGNP---LADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKT 604

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G     +LGH
Sbjct: 605 EVYTWGKGANGRLGH 619



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 132/291 (45%), Gaps = 21/291 (7%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 156
           V H   I   S  N   +  G YHT  ++ S     +  G+   G+LGHG E +  V   
Sbjct: 350 VMHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-K 408

Query: 157 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + I  P+ VE+LK
Sbjct: 409 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSISLPKEVESLK 467

Query: 216 GVPCKQVTAGLNFTGFL------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 468 GLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 527

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           A L E  +  Q+A G S  +A T +G VY+ GS     LG+     +L  R      +  
Sbjct: 528 AALVEP-NFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEGKLSKS- 585

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 586 -FVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 635



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 27/296 (9%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 301 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALS 360

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT +G +Y++G G+ NF  LGHG +     P+ +     +GIH
Sbjct: 361 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 418

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + S+G ++T+G G  G LGHGD    +LP+ + SLK    VQ     
Sbjct: 419 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGV 478

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +++             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 479 WHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 535

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 482
            Q++ G   TV  T  G ++  G     QLG+    G L PT +       F++E+
Sbjct: 536 CQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKL-PTRVEGKLSKSFVEEI 590



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 18/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT +++++  +F+ G    GVLGHG    + +S  + +        VQ +    
Sbjct: 422 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSISLPKEVESLKGLRTVQAACGVW 479

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D    +  P  V AL      QV
Sbjct: 480 HTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCQV 538

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G + T   T  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 539 ACGHSLTVARTTSGHVYTMGSPVYGQLGN-PLADGKLPTRVEGKLSKSFVEEIACGAYHV 597

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 598 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 642



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 13/196 (6%)

Query: 94  LRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 153
           L+ L++V+ +  +  T+A   +++  G   +   S+  +F+ G    G LGHG +  + V
Sbjct: 466 LKGLRTVQAACGVWHTAA--VIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 523

Query: 154 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 213
             T +      +  QV+   +       SG V+T G       G+     P+   +L   
Sbjct: 524 P-TCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGSPVYGQLGN-----PLADGKLPTR 577

Query: 214 LKGVPCK----QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           ++G   K    ++  G      LT +  V+T G   +G+LGHGDT DR +P  +  L++ 
Sbjct: 578 VEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD- 636

Query: 270 GSVVQIAAGPSYMLAV 285
             V  IA G S+  A+
Sbjct: 637 KQVKSIACGTSFTAAI 652



 Score = 38.1 bits (87), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 9/130 (6%)

Query: 113 NQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQ 168
           N  Q+  G  H+L ++ ++   V++ GS + G LG+     +    TR+    S + V +
Sbjct: 534 NFCQVACG--HSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLP--TRVEGKLSKSFVEE 589

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           ++    H A +    +V+T G  ++   GH DT+     P LVEALK    K +  G +F
Sbjct: 590 IACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTD-DRNSPSLVEALKDKQVKSIACGTSF 648

Query: 229 TGFLTIRGHV 238
           T  + +   V
Sbjct: 649 TAAICLHKWV 658


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 168/330 (50%), Gaps = 24/330 (7%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQS--GQVFTCGDNSS------FCCGHRDTNR----- 203
           +IN     H++ +  ++N    + +S   ++ T  +NS+      F  G  D ++     
Sbjct: 516 KINPDFQKHILSMFYTQNRKLSISESKDDELCTLWENSTNKQVDVFMWGLNDKDQLGGLK 575

Query: 204 --PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTP 260
              +  P L + L  + CK +  G   T F+T +G +++CG ++ G+LG GD T +  +P
Sbjct: 576 GSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSP 635

Query: 261 KSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           + +  L + + + V + +G ++++A+T +G+ +S+G G N  LGHG      +P  I+ F
Sbjct: 636 RLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAF 695

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
              G  V  +S G  H  A+  + Y+YTWG G  G LGHGDE     P+ ++    +  V
Sbjct: 696 V--GKIVTDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETILQPKFVTHFLGYNVV 753

Query: 380 QVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 437
           QV   +R  +T  + D   V+ +G   FG LG   RG S++ L P  ++ LR   + +I 
Sbjct: 754 QVSCGSRDAQTVCITDDDKVWSWGDGDFGKLG---RGGSERCLIPVEVEQLRGLQICKIL 810

Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
            G   TV +T  G ++ +G  +  +LGH T
Sbjct: 811 CGAQFTVALTKTGTVWTWGKGDFYRLGHGT 840



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 144/292 (49%), Gaps = 12/292 (4%)

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 235
           F+   G++++CG++S    G  D    +  PRLV  L  +   +V+  +G N    LT  
Sbjct: 605 FITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSD 664

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSF 294
           G   + G   +GQLGHG+ +    P  I     VG +V  I+ G ++  A+  N  +Y++
Sbjct: 665 GLAFSWGDGENGQLGHGNLMSCSKPHLIEAF--VGKIVTDISCGSAHSAAIVENKYLYTW 722

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGY 352
           G G    LGHG++   LQP+ +  F   G +VV+VS G  D   V +     V++WG G 
Sbjct: 723 GLGDFGRLGHGDEETILQPKFVTHFL--GYNVVQVSCGSRDAQTVCITDDDKVWSWGDGD 780

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G      +P  +  L+     ++    + T  L  TG+V+ +G   F  LG   
Sbjct: 781 FGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLG--- 837

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G    V +P++++ LR  HV  I+ G  H + VT  G +F +GDN+  QLG
Sbjct: 838 HGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG 889



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 11/290 (3%)

Query: 189  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 246
            G+N     G+ +T   +  PRL+E++K +  K+++  +G      L+  G V + G    
Sbjct: 1502 GNNGQLGLGYSET---VTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGED 1558

Query: 247  GQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
            G+LGHG+      PK I      G ++  I AG S+  A+  NG +Y++G G    LGHG
Sbjct: 1559 GKLGHGNRQTSSQPKRIEFF--CGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHG 1616

Query: 306  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
            +  D+L+P+ ++  +   +  V   +GD   + + +   V++WG G  G LG G      
Sbjct: 1617 DSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCK 1676

Query: 366  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            +P  +  L     V+V    + +  L   G +Y +G   +  LG    G  + V RP ++
Sbjct: 1677 VPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLG---HGTEEHVRRPMMV 1733

Query: 426  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             +L    V+ IS G  H VV TD G ++ +GDN+  QLG  T+     PT
Sbjct: 1734 TALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPT 1783



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 149/338 (44%), Gaps = 14/338 (4%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE-- 173
           I  G   T  I+N   ++SCG S  G LG G  T    S   +   +   V +VS     
Sbjct: 596 IAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGG 655

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           NH   +   G  F+ GD  +   GH +      +P L+EA  G     ++ G   +  + 
Sbjct: 656 NHVMALTSDGLAFSWGDGENGQLGHGNL-MSCSKPHLIEAFVGKIVTDISCGSAHSAAIV 714

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYMLAVTGNGV 290
              +++T G    G+LGHGD      PK +     +G +VVQ++ G   +  + +T +  
Sbjct: 715 ENKYLYTWGLGDFGRLGHGDEETILQPKFVTHF--LGYNVVQVSCGSRDAQTVCITDDDK 772

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+S+G G    LG G     L P  ++  R  G+ + ++  G +  VAL  +G V+TWGK
Sbjct: 773 VWSWGDGDFGKLGRGGSERCLIPVEVEQLR--GLQICKILCGAQFTVALTKTGTVWTWGK 830

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G    LGHG +I    P+ +  L+    + +         +   G V+ +G    G LG 
Sbjct: 831 GDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLG- 889

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
              G +D    P ++  L  H +  ++ G  H++  T+
Sbjct: 890 --TGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWTE 925



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 125/275 (45%), Gaps = 13/275 (4%)

Query: 95   RFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS 154
            R L+S++H  +I + S       + GR+   L S+  VFS G    G LGHG   T    
Sbjct: 1519 RLLESIKHI-NIKKISVH-----SGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQP 1572

Query: 155  FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
              RI F     +  + A  +H+A +  +G+++T G       GH D++  + +P+ VEAL
Sbjct: 1573 -KRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQL-KPKQVEAL 1630

Query: 215  KGVPCKQVTAGLNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
            +      V  G      L I    +V + G   +G+LG G +     P  I  L   G +
Sbjct: 1631 QFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKG-I 1689

Query: 273  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            V++  G  + +A+T  GV+Y++G G  + LGHG +    +P  +     K   V  +S G
Sbjct: 1690 VKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNK--IVTSISCG 1747

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
              H V     G VY WG    G LG G  I +  P
Sbjct: 1748 SLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTP 1782



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 13/272 (4%)

Query: 113 NQMQITTGRYHT------LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 166
           NQ+ +T    H+       L S+   FS G    G LGHG     C     I       V
Sbjct: 642 NQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQLGHG-NLMSCSKPHLIEAFVGKIV 700

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             +S    H+A ++++  ++T G       GH D    I +P+ V    G    QV+ G 
Sbjct: 701 TDISCGSAHSAAIVENKYLYTWGLGDFGRLGHGD-EETILQPKFVTHFLGYNVVQVSCGS 759

Query: 227 NF--TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
               T  +T    V + G    G+LG G +     P  +  L  +  + +I  G  + +A
Sbjct: 760 RDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIPVEVEQLRGL-QICKILCGAQFTVA 818

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +T  G V+++G G  + LGHG      QP+ ++  R  G HV+ ++ G  H +A+   G 
Sbjct: 819 LTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLR--GKHVIDIAVGALHCLAVTQDGE 876

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
           V++WG    G LG G+   K +P  ++ L +H
Sbjct: 877 VFSWGDNDHGQLGTGETDVKKVPNLITGLHNH 908



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGD 333
           IA G      +T  G +YS G  S   LG G+    +  PR +    +  +  V V +G 
Sbjct: 596 IAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGG 655

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
            HV+AL S G  ++WG G  G LGHG+ +  + P  + +    +   +      +  +V+
Sbjct: 656 NHVMALTSDGLAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVE 715

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGR 451
              +Y +G   FG LG    G  + +L+P+ +     ++V Q+S G     TV +TD  +
Sbjct: 716 NKYLYTWGLGDFGRLG---HGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDK 772

Query: 452 LFGFGDNERAQLGHDTLRGCLEPTEI 477
           ++ +GD +  +LG      CL P E+
Sbjct: 773 VWSWGDGDFGKLGRGGSERCLIPVEV 798



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 5/194 (2%)

Query: 286  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
            T   +V++ G G+N  LG G       PR +++ +   I  + V +G  H +AL S G V
Sbjct: 1491 TDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEV 1550

Query: 346  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
            ++WG+G  G LGHG+    + P+ +      +   +CA    +  +   G +Y +G   +
Sbjct: 1551 FSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRY 1610

Query: 406  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQL 463
            G LG    G SD  L+P+ +++L+   V  ++  +G   T+ +T+   ++ +GD +  +L
Sbjct: 1611 GRLG---HGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKL 1667

Query: 464  GHDTLRGCLEPTEI 477
            G     GC  P  I
Sbjct: 1668 GRGGSDGCKVPMII 1681



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 12/148 (8%)

Query: 345 VYTWG---KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           V+ WG   K   G L        TL + LSSL+      +    + TF + + G +Y  G
Sbjct: 560 VFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKF---IAGGSKSTFFITNKGKLYSCG 616

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
              FG LG  D  ++  V  PR++  L    V+++S  +G  H + +T  G  F +GD E
Sbjct: 617 ESSFGKLGIGD--ITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGE 674

Query: 460 RAQLGHDTLRGCLEP--TEIFIQEMEED 485
             QLGH  L  C +P   E F+ ++  D
Sbjct: 675 NGQLGHGNLMSCSKPHLIEAFVGKIVTD 702



 Score = 42.4 bits (98), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 15/194 (7%)

Query: 290  VVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVY 346
            V   F    +FCL     H   E+  + I    ++  H V++   D   V + + G  V+
Sbjct: 1443 VFEDFEKNLDFCLARVNGHFSAEMCVKLIDNLLKE--HNVKI---DCDTVCITTDGALVF 1497

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ---VCARKRKTFVLVDTGSVYGFGWM 403
              G G  G LG G     T P  L S+K H+ ++   V +  R    L   G V+ +G  
Sbjct: 1498 ATGYGNNGQLGLGYSETVTSPRLLESIK-HINIKKISVHSGGRHCLALSSDGEVFSWGEG 1556

Query: 404  GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
              G LG  +R  S    +P+ ++      ++ I  G  H+  +   G L+ +G     +L
Sbjct: 1557 EDGKLGHGNRQTSS---QPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRL 1613

Query: 464  GHDTLRGCLEPTEI 477
            GH      L+P ++
Sbjct: 1614 GHGDSDDQLKPKQV 1627


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 152/350 (43%), Gaps = 25/350 (7%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+VFTCG N
Sbjct: 375 VWSCGQNSYGELGHG-DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 433

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
            +  CG   T R      + +   G        G   T  ++  G V TCG N  GQLGH
Sbjct: 434 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 493

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGV--VYSFGSGSNFCLGHGEQ 307
           G+T     PK I  LE    +V++ +   Y  +LA     +  +Y+FG      LGH + 
Sbjct: 494 GNTTSESVPKIIRSLE--NKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDS 551

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            D   P+ ++    +   +V V+ G  H + +  SG  + +GK   G LG     ++  P
Sbjct: 552 IDRKIPQFVEALSDQ--QIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAP 609

Query: 368 EPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFGSLGFPDRGVS------- 416
                ++  L  Q C   R     T  L     ++ FG   +G LG      S       
Sbjct: 610 ---VQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQL 666

Query: 417 --DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              +    R++D L    + +I+ G YHT+ V+D G ++ FG N   QLG
Sbjct: 667 QQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 716



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 16/248 (6%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V +CG N++G+LGHGDT  R + + I  L++   ++QI AG  + + +T +G V++ G 
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFERIQALQQ-KEIIQIGAGNEHTVVLTADGKVFTCGY 432

Query: 297 GSNFCLGHG----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
             N   G G      H    P+        G        G EH + + + G V T G  Y
Sbjct: 433 NDNGQCGQGGTARVSHLSEIPKM-----DSGSSQAHAYNGCEHTILVSTDGRVATCGYNY 487

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV---YGFGWMGFGSLG 409
            G LGHG+   +++P+ + SL++ +   V      T +  + G++   Y FG   +G LG
Sbjct: 488 RGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLG 547

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
             D  +  K+  P+ +++L    +  ++ G YHT+VVT  G+ F FG N+  QLG DT+ 
Sbjct: 548 HND-SIDRKI--PQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTME 604

Query: 470 GCLEPTEI 477
             L P ++
Sbjct: 605 NQLAPVQV 612



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 10/285 (3%)

Query: 184 QVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           +V++CG NS    GH DT +R  F    ++AL+     Q+ AG   T  LT  G V TCG
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFER--IQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 431

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
            N +GQ G G T        I  ++   S      G  + + V+ +G V + G      L
Sbjct: 432 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQL 491

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHG 359
           GHG    E  P+ I++   K + +  VS    H V     G    +YT+G+   G LGH 
Sbjct: 492 GHGNTTSESVPKIIRSLENKIVRL--VSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHN 549

Query: 360 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
           D ID+ +P+ + +L     V V   +  T V+  +G  + FG   +G LG     + +++
Sbjct: 550 DSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGID--TMENQL 607

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              ++   L      +I  G YHT+ +     LF FG N+  QLG
Sbjct: 608 APVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLG 652



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 152/353 (43%), Gaps = 30/353 (8%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSAS 172
           +QI  G  HT+ L ++  VF+CG +  G  G G  T +    + I    S +        
Sbjct: 409 IQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGG-TARVSHLSEIPKMDSGSSQAHAYNG 467

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   V   G+V TCG N     GH +T      P+++ +L+    + V+     T   
Sbjct: 468 CEHTILVSTDGRVATCGYNYRGQLGHGNTTSESV-PKIIRSLENKIVRLVSCSYYHTVLA 526

Query: 233 TIRGHV---HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              G++   +T G N +GQLGH D++DR  P+ +  L +   +V +A G  + + VT +G
Sbjct: 527 CEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSD-QQIVSVACGQYHTMVVTVSG 585

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVY 346
             ++FG      LG     ++L P  +    R G+     + +  G  H +AL S  +++
Sbjct: 586 KAFAFGKNDYGQLGIDTMENQLAPVQV----RGGLERQECLEIRCGYYHTIALCSGAHLF 641

Query: 347 TWGKGYCGALGHGDEIDKTL------------PEPLSSLKSHLAVQVCARKRKTFVLVDT 394
            +G+   G LG G     +                +  L+    V++      T  + D 
Sbjct: 642 AFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDN 701

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           G +Y FG    G LG  D   + + + P  +D      ++ ++ G YHTVV+T
Sbjct: 702 GVMYVFGRNNHGQLGTGD---TTERVYPFPIDDFVGKRIALVAAGFYHTVVLT 751



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 136/309 (44%), Gaps = 21/309 (6%)

Query: 100 VEHSSDIVETSAGN-QMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR 157
           V H S+I +  +G+ Q     G  HT+L+S +  V +CG +  G LGHG  T++ V   +
Sbjct: 446 VSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVP--K 503

Query: 158 INFPSAAHVVQ-VSASENHAAFVLQSGQV---FTCGDNSSFCCGHRDT-NRPIFRPRLVE 212
           I       +V+ VS S  H     + G +   +T G N     GH D+ +R I  P+ VE
Sbjct: 504 IIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKI--PQFVE 561

Query: 213 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           AL       V  G   T  +T+ G     G N +GQLG     ++  P  +    E    
Sbjct: 562 ALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQEC 621

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------ELQPRAIQTFRR----K 322
           ++I  G  + +A+     +++FG      LG G  +       +LQ +     R     +
Sbjct: 622 LEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELE 681

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G  +VR++ G  H +A+  +G +Y +G+   G LG GD  ++  P P+          V 
Sbjct: 682 GKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVA 741

Query: 383 ARKRKTFVL 391
           A    T VL
Sbjct: 742 AGFYHTVVL 750


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 185/398 (46%), Gaps = 25/398 (6%)

Query: 96   FLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 155
            FL S     D  +T+AG+  +  +    +     + VF  G +    LG        +  
Sbjct: 2887 FLASDNEEEDDEKTAAGSLARKKSSGLESAASIRTKVFVWGLNDKDQLGG-------LKG 2939

Query: 156  TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            ++I  PS      A +VVQV+        V   G+++ CG+ ++   G   ++  I  PR
Sbjct: 2940 SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPR 2999

Query: 210  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
             + AL     K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+
Sbjct: 3000 QISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK 3059

Query: 268  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
                +  IA G S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V+
Sbjct: 3060 -TKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVI 3116

Query: 328  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            +V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q+    
Sbjct: 3117 QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGA 3176

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G V+ +G   +  LG    G    V +P+I++ LR   +  ++ G  H + 
Sbjct: 3177 QFSLALTKSGVVWTWGKGDYFRLG---HGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLA 3233

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
            VTD G+++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3234 VTDSGQVYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 3269



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3971 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4030

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4031 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4089

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4090 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4149

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4150 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4206

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4207 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4235



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 3985 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4043

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4044 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4102

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4103 LTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4160

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4161 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4220

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4221 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4257



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 142/306 (46%), Gaps = 19/306 (6%)

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
           S+  V Q+  SE     + +SG V+T    S+              P L+  L      +
Sbjct: 400 SSTGVTQIVCSEKVFLILSRSGAVYTQNYKST-----------TLAPMLIHGLSSRKIVK 448

Query: 222 VTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGS-VVQIA 276
           + A  +   FL +   G V++ G    G+LGHGD   L+ P   +    ++ G  VVQIA
Sbjct: 449 LAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIA 508

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G +Y  AVT +G +Y++G G+   LGHG   D   P  +   + + +  V   +GD   
Sbjct: 509 CGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQT 568

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
           +A+  +G V++WG G  G LG G       P+ +  L+    V+VC   + +  L   G 
Sbjct: 569 LAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQ 628

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           VY +G      LG    G  + V  P++LDSL+   V  I+ G  H + +TD G +  +G
Sbjct: 629 VYTWGKGDNQRLG---HGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685

Query: 457 DNERAQ 462
            N++ Q
Sbjct: 686 SNDKLQ 691



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 111/202 (54%), Gaps = 9/202 (4%)

Query: 272 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVV 327
           +V++AA P   + LA++ +G VYS+G G    LGHG+     +P  I TF  ++ G  VV
Sbjct: 446 IVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVV 505

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARK 385
           +++ G  +  A+ + G +YTWG+G  G LGHG   D T P  +++LK    V V   +  
Sbjct: 506 QIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGD 565

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            +T  + + G V+ +G   +G LG   RG SD    P++++ L+   + ++  G   +V 
Sbjct: 566 AQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 622

Query: 446 VTDRGRLFGFGDNERAQLGHDT 467
           +T  G+++ +G  +  +LGH T
Sbjct: 623 LTKDGQVYTWGKGDNQRLGHGT 644



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 121/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A
Sbjct: 3983 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAA 4041

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A +  SG++FT G       GH D+   + +P+LV+AL+G     V   +G   T
Sbjct: 4042 GGAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDVACGSGDAQT 4100

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4101 LCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4159

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4160 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4217

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4218 DNDEGQLGDG 4227



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3950

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3951 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4010

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG   
Sbjct: 4011 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG--- 4067

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4068 HGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 4127

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4128 CKVPMKI 4134



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 24/290 (8%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPET---TQCVSFTRINFPSAAHVVQVSASENHA 176
           G++   L ++  V+S G    G LGHG  T      +  T     +   VVQ++    ++
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYS 514

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-- 234
           A V   G+++T G  +    GH  ++  +  P LV ALKG     V  G      L +  
Sbjct: 515 AAVTADGELYTWGRGNYGRLGH-GSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTE 573

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY++
Sbjct: 574 NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVYTW 632

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G N  LGHG       P+ + +   +G  VV ++ G  H +AL   G V++WG     
Sbjct: 633 GKGDNQRLGHGTDEHVRYPKLLDSL--QGKKVVDIAVGSTHCLALTDEGEVHSWGSN--D 688

Query: 355 ALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            L H D +  +K  P+ L  L S           K  V +  G    F W
Sbjct: 689 KLQHFDTLFPNKKQPKALPGLNS-----------KHIVGISCGPGQSFAW 727



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 19/209 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QI       L ++ +G VY+     N+      +   L P  I     + I  +    
Sbjct: 404 VTQIVCSEKVFLILSRSGAVYT----QNY------KSTTLAPMLIHGLSSRKIVKLAAHP 453

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL----AVQVCARKRK 387
             +H +AL +SG VY+WG G  G LGHGD      P  +++          VQ+      
Sbjct: 454 DGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTY 513

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+ V  P ++ +L+   V  ++  +G   T+ 
Sbjct: 514 SAAVTADGELYTWGRGNYGRLG---HGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLA 570

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           VT+ G+++ +GD +  +LG     GC  P
Sbjct: 571 VTENGQVWSWGDGDYGKLGRGGSDGCKTP 599



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4095 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4153

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4154 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4212

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4213 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4258



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3885 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3944

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3945 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4001

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4002 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4028


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG+N
Sbjct: 2   LCWGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGAN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVVAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG++  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGANTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 20/313 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 224
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  
Sbjct: 348 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVAC 405

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 465

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 339
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 466 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 523

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SSG ++TWG G    LGHGD+  K +P  +++L      QV      T  L 
Sbjct: 524 GSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 583

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G VY  G   +G LG P    +D  +  R+   L    V +I+ G YH  V+T R  +
Sbjct: 584 TSGHVYTMGSPVYGQLGNPH---ADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEV 640

Query: 453 FGFGDNERAQLGH 465
           + +G     +LGH
Sbjct: 641 YTWGKGSNGRLGH 653



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 136/290 (46%), Gaps = 19/290 (6%)

Query: 99  SVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 157
           +V+H   I   +  N   +  G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 385 NVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 443

Query: 158 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 444 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 502

Query: 217 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 503 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 562

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 563 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKS-- 619

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 620 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 669



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 20/218 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  IA G  + + VT  G  +S+G  S   LGHG   +   P+ I       I +V  + 
Sbjct: 348 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELV--AC 405

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS--HLAVQVCARKRKTF 389
           G+ H  A+  SG +YTWGKG  G LGHG+E+   +P+ ++ L    H++   C     T 
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG-PYHTA 464

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD- 448
           V+   G ++ FG   FG LG  DR     V  PR +DSL+     + + G++HT  V + 
Sbjct: 465 VVTSAGQLFTFGDGTFGVLGHGDR---KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEV 521

Query: 449 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
                       G+LF +GD ++++LGH      L PT
Sbjct: 522 MVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPT 559



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 25/294 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 396

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 397 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 454

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK    V+       
Sbjct: 455 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWH 514

Query: 388 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
           T  +V+             G ++ +G      LG  D+   +  L P  + +L   +  Q
Sbjct: 515 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK---EPKLVPTCVAALVEPNFCQ 571

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 482
           ++ G   TV +T  G ++  G     QLG+    G + PT +       F++E+
Sbjct: 572 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEI 624



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 456 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 514

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 515 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 573

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 574 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVDGKLHKSFVEEIACGAYHVA 632

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 633 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 676



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 6/172 (3%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G LGHG + +   
Sbjct: 331 KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 388

Query: 367 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
           P+ + +L + ++ +  C       V + +G +Y +G   FG LG  +  VS  V + R+ 
Sbjct: 389 PKLIDALNTTNIELVACGEYHSCAVTL-SGDLYTWGKGDFGILGHGNE-VSHWVPK-RVN 445

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 446 FLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV 497


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 152/323 (47%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 224
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 339
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 485

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SSG ++TWG G  G LGHG++  K +P  +++L      QV      T  L 
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 545

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G VY  G   +G LG      +D  L  R+   L    V +I+ G YH  V+T R  +
Sbjct: 546 TSGHVYTMGSPVYGQLG---NSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH  +     PT
Sbjct: 603 YTWGKGSNGRLGHGDVDDRNSPT 625



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 174
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 423

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 233
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 424 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482

Query: 234 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 483 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 541

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+T +G VY+ GS     LG+     +L P  ++    K   V  ++ G  HV  L S 
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGNSHADGKL-PNRVEGKLHKSF-VEEIACGAYHVAVLTSR 599

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLK 631



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 17/277 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 416

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK    V+       
Sbjct: 417 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWH 476

Query: 388 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
           T  +V+             G ++ +G    G LG    G  +  L P  + +L   +  Q
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLG---HGNKEPKLVPTCVAALVEPNFCQ 533

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           ++ G   TV +T  G ++  G     QLG+    G L
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKL 570



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 111/248 (44%), Gaps = 22/248 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 418 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 476

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH +   P   P  V AL      QV 
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 535

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKLPNRVEGKLHKSFVEEIACGAYHVA 594

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +T    VY++G GSN  LGHG+  D   P  +++ + K   V  ++ G     A+    
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDK--QVKSIACGTNFTAAV---- 648

Query: 344 YVYTWGKG 351
            ++ W  G
Sbjct: 649 CIHRWASG 656



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           GS+F +    + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G L
Sbjct: 287 GSSFDM----KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRL 340

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           GHG + +   P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS
Sbjct: 341 GHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNE-VS 399

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
             V + R+   L   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E
Sbjct: 400 HWVPK-RVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE 458

Query: 477 I 477
           +
Sbjct: 459 V 459


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLSS---------------LKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F    +V  V     H  FVL  G V+TCG N     GH  + R   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR---KPEQVGALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 275
                V+ G   T  L  +G V + G   +GQ+G     +    P++I  L +V  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDV-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++ +  ++S+G      LG G E   E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSL--SGIPFAHIAAGGG 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H  AL  SG ++ WG+   G LG  DE D+ +P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 453
           G V+ FG  G+G LG      ++  + PR +  L    V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  G   T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS--RRKPEQVG 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+    +V ++ G ++ LA+   G V+S+G      +G     + ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           + +V+V+ G  H +AL     +++WG+   G LG G EI K   P  + SL       + 
Sbjct: 137 VQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDE--TDRNV-PALLKSLRSQKIIHICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  HTL +++   VFS G ++ G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHH 148

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  + +   +F+ G N     G     +    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 267

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 354
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 355 ALGHGDEIDKTLP 367
            LG G  I++  P
Sbjct: 326 QLGTGSTINRKSP 338



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKP---EQVGALDAQIIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQVF+ G       G       I  PR +++L  V   QV  G + +  L+    + +
Sbjct: 101 DKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFS 160

Query: 241 CGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G  + +   P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+     +  +G +Y FG  G G LG
Sbjct: 278 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q+  G +H+L +S +S +FS G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  +  SG +F  G N     G  D T+R +  P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAAL 257

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 290
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 315

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           +YSFG G N  LG G   +   P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSPFTVK 342


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 152/292 (52%), Gaps = 21/292 (7%)

Query: 206 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT-----HGQLGHGDTLDRPTP 260
            RP+ VEAL     + V+AGL  +   T  G + + G  +      G+LGHGD   +  P
Sbjct: 98  LRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIP 157

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
           + +  L  V  +V++AAG  + L ++  G V+SFG G +  LGHG+Q  +L P+ I + +
Sbjct: 158 RPVLSLSGV-RIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQ 216

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
           R+   VV ++AG  H + +  SG VY++G G  GALGHGD     +P+ +       AV+
Sbjct: 217 RE--KVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVK 274

Query: 381 VCARK------RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
           V A         K +VL   G V  FG   +G LG    G   +++       + A  V 
Sbjct: 275 VAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGL---GHFSRMIASPAQVQVEAAAV- 330

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEPTEIFIQEMEED 485
           +I  G +H++V+T+ GR++ FG  +  QLGH + LR   EPT   IQ +E +
Sbjct: 331 EIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPT--LIQSLERE 380



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 153/324 (47%), Gaps = 18/324 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCC-----GHRDTNRPIFRPRLVEALKGVPCK 220
           V  VSA   H+    + G + + G  S+        GH D  R    PR V +L GV   
Sbjct: 111 VRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGD-QRTQMIPRPVLSLSGVRIV 169

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           +V AG + +  L+ +G+V + G    G LGHGD   +  PK I+ L+    VV IAAG +
Sbjct: 170 KVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQRE-KVVDIAAGSA 228

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH----- 335
           + L V  +G VYSFG GS   LGHG+    L P+ I+ F ++    V+V+AG  H     
Sbjct: 229 HSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQR--PAVKVAAGGSHSLVLS 286

Query: 336 -VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
            +  L+  G V ++G+   G LG G    + +  P        AV++ A    + VL + 
Sbjct: 287 KLYVLEQEGRVLSFGQNSYGQLGLG-HFSRMIASPAQVQVEAAAVEIEAGAHHSLVLTND 345

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G VY FG    G LG  +    +    P ++ SL    +  ++ G   ++V++  G +F 
Sbjct: 346 GRVYSFGLAQHGQLGHGNDLRDNP--EPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFS 403

Query: 455 FGDNERAQLGHDTLRGCLEPTEIF 478
           FG  +  +LG        +PT +F
Sbjct: 404 FGCGKNGRLGKGDESNATQPTVVF 427



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 17/226 (7%)

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-----LGH 304
           GHGD +D+  PK +  L     V  ++AG  + L  T +G + SFG GS        LGH
Sbjct: 90  GHGDHVDKLRPKCVEALARE-RVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGH 148

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G+Q  ++ PR + +    G+ +V+V+AG  H + L   G V+++G G  G+LGHGD+  +
Sbjct: 149 GDQRTQMIPRPVLSL--SGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQ 206

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
            +P+ +SSL+    V + A    + V+ ++G VY FG    G+LG  D   +D  L P+ 
Sbjct: 207 LVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGD---TDMSLVPKK 263

Query: 425 LDSLRAHHVSQISTGLYHTVVVT------DRGRLFGFGDNERAQLG 464
           ++        +++ G  H++V++        GR+  FG N   QLG
Sbjct: 264 IEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLG 309



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 162/346 (46%), Gaps = 27/346 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSS---LCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 170
           ++ G YH+L+ +       F  GS+   + G LGHG + TQ +    ++  S   +V+V+
Sbjct: 114 VSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSL-SGVRIVKVA 172

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           A  +H+  +   G VF+ G       GH D  R +  P+L+ +L+      + AG   + 
Sbjct: 173 AGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV-PKLISSLQREKVVDIAAGSAHSL 231

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG--- 287
            +   G V++ G  + G LGHGDT     PK I    +    V++AAG S+ L ++    
Sbjct: 232 VVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQR-PAVKVAAGGSHSLVLSKLYV 290

Query: 288 ---NGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
               G V SFG  S   LG G     +  P  +Q         V + AG  H + L + G
Sbjct: 291 LEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVEAA----AVEIEAGAHHSLVLTNDG 346

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            VY++G    G LGHG+++ +  PEP  + SL+    V V A    + VL   G+V+ FG
Sbjct: 347 RVYSFGLAQHGQLGHGNDL-RDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFG 405

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
               G LG   +G      +P ++ +   H VS IS G  H++VV 
Sbjct: 406 CGKNGRLG---KGDESNATQPTVVFAA-GHTVSAISAGYSHSLVVV 447



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 113/229 (49%), Gaps = 15/229 (6%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G  H+L+++ S  V+S G    G LGHG +T   +   +I        V+V+A  
Sbjct: 221 VDIAAGSAHSLVVAESGDVYSFGLGSEGALGHG-DTDMSLVPKKIEHFVQRPAVKVAAGG 279

Query: 174 NHAA-----FVL-QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           +H+      +VL Q G+V + G NS    G    +R I  P  V+        ++ AG +
Sbjct: 280 SHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVE--AAAVEIEAGAH 337

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
            +  LT  G V++ G   HGQLGHG+ L D P P  I  LE    +V +AAG ++ L ++
Sbjct: 338 HSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERE-RIVDVAAGNNFSLVLS 396

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             G V+SFG G N  LG G++ +  QP  +      G  V  +SAG  H
Sbjct: 397 AEGTVFSFGCGKNGRLGKGDESNATQPTVVFA---AGHTVSAISAGYSH 442



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 8/144 (5%)

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF----- 405
           G     GHGD +DK  P+ + +L       V A    + V    G +  FG+        
Sbjct: 84  GLADPSGHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVD 143

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G LG  D+      + PR + SL    + +++ G +H++V++D+G +F FG      LGH
Sbjct: 144 GRLGHGDQRTQ---MIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGH 200

Query: 466 DTLRGCLEPTEIFIQEMEEDTGLA 489
                 L P  I   + E+   +A
Sbjct: 201 GDQARQLVPKLISSLQREKVVDIA 224


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 20/313 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 224
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  
Sbjct: 314 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALNTTNIELVAC 371

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 372 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 431

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 339
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 432 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 489

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SSG ++TWG G    LGHGD+  K +P  +++L      QV      T  L 
Sbjct: 490 GSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 549

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G VY  G   +G LG P    +D  +  R+   L    V +I+ G YH  V+T R  +
Sbjct: 550 TSGHVYTMGSPVYGQLGNPH---ADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEV 606

Query: 453 FGFGDNERAQLGH 465
           + +G     +LGH
Sbjct: 607 YTWGKGSNGRLGH 619



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 136/290 (46%), Gaps = 19/290 (6%)

Query: 99  SVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 157
           +V+H   I   +  N   +  G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 351 NVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 409

Query: 158 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 410 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 468

Query: 217 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 469 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 528

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 529 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKS-- 585

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 586 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 635



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 20/218 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  IA G  + + VT  G  +S+G  S   LGHG   +   P+ I       I +V  + 
Sbjct: 314 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELV--AC 371

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS--HLAVQVCARKRKTF 389
           G+ H  A+  SG +YTWGKG  G LGHG+E+   +P+ ++ L    H++   C     T 
Sbjct: 372 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG-PYHTA 430

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD- 448
           V+   G ++ FG   FG LG  DR     V  PR +DSL+     + + G++HT  V + 
Sbjct: 431 VVTSAGQLFTFGDGTFGVLGHGDR---KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEV 487

Query: 449 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
                       G+LF +GD ++++LGH      L PT
Sbjct: 488 MVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPT 525



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 25/294 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 362

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 363 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 420

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK    V+       
Sbjct: 421 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWH 480

Query: 388 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
           T  +V+             G ++ +G      LG  D+   +  L P  + +L   +  Q
Sbjct: 481 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK---EPKLVPTCVAALVEPNFCQ 537

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 482
           ++ G   TV +T  G ++  G     QLG+    G + PT +       F++E+
Sbjct: 538 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVDGKLHKSFVEEI 590



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 422 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 480

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 481 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 539

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 540 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVDGKLHKSFVEEIACGAYHVA 598

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 599 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 642



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 6/172 (3%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G LGHG + +   
Sbjct: 297 KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 354

Query: 367 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
           P+ + +L + ++ +  C       V + +G +Y +G   FG LG  +  VS  V + R+ 
Sbjct: 355 PKLIDALNTTNIELVACGEYHSCAVTL-SGDLYTWGKGDFGILGHGNE-VSHWVPK-RVN 411

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 412 FLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV 463


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 175/355 (49%), Gaps = 21/355 (5%)

Query: 132 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +F  GS++ G LG G  E     +   +NF  A  + Q++  +N+   V + GQV++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N     G     +   R +L+  +  +  ++   G + T  +   G + + GSN  GQLG
Sbjct: 61  NDHGQLGQEKGRK---RLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLG 117

Query: 251 HGDTLDRPTPKSIAP--LEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG- 305
               LDR +     P  ++ +G+  +VQIA G  + +A+T NG +Y++GS S+  LG G 
Sbjct: 118 ----LDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGS 173

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           +   EL+P+ + +     + +  V+ G  H + +  SG V+ WG+   G LG  D  ++ 
Sbjct: 174 DTKMELKPKLVHSL--AAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRN 231

Query: 366 LPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
           +P  L +L+ S +    C  +   F+ +D G V+  G   +G LG    G     + PR 
Sbjct: 232 VPCQLRTLRNSRVCYAACGEEFSVFLTMD-GGVFTCGAGMYGQLG---HGNKTSEILPRQ 287

Query: 425 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           +  L    V+QIS G  HT+ +V  RGR++ +G     QLG+   +    P  +F
Sbjct: 288 IMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVF 342



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 140/300 (46%), Gaps = 15/300 (5%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGH--GPETTQCVS-FTRINFPSAAHVVQVSA 171
           QI  G  +T+ ++    V+SCG++  G LG   G +  Q +S    + F  AA       
Sbjct: 38  QIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRKRLQLISGIDPLAFRKAA------C 91

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             +H   V + GQ+F+ G N     G    +  I  PR+V+ L      Q+  GL  +  
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIA 151

Query: 232 LTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           LT  G ++  GSN+ GQLG G DT     PK +  L  V  +  +A G  + + ++ +G 
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAV-PIAFVACGGYHTIVISKSGA 210

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+++G  +   LG  +  +   P  ++T R     V   + G+E  V L   G V+T G 
Sbjct: 211 VFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNS--RVCYAACGEEFSVFLTMDGGVFTCGA 268

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLG 409
           G  G LGHG++  + LP  +  L      Q+   +R T  LV + G VY +G  G G LG
Sbjct: 269 GMYGQLGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 5/251 (1%)

Query: 120 GRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           G  HTL+++    +FS GS++ G LG    +        +       +VQ++    H+  
Sbjct: 92  GSSHTLVVNEWGQLFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIA 151

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           +  +G+++  G NS    G     +   +P+LV +L  VP   V  G   T  ++  G V
Sbjct: 152 LTNNGELYAWGSNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAV 211

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
              G NT GQLG  D  +R  P  +  L     V   A G  + + +T +G V++ G+G 
Sbjct: 212 FAWGRNTFGQLGLSDIQNRNVPCQLRTLRN-SRVCYAACGEEFSVFLTMDGGVFTCGAGM 270

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALG 357
              LGHG +  E+ PR I      G  V ++S G  H +AL  S G VY WG G  G LG
Sbjct: 271 YGQLGHGNKTSEILPRQIMELM--GSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328

Query: 358 HGDEIDKTLPE 368
           +    + T P+
Sbjct: 329 NRIAQNSTTPQ 339


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 150/307 (48%), Gaps = 19/307 (6%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
           T GQLGH    ++P  + I  L +   ++ +A G S+ LA++  G ++S+G+GS+  LG 
Sbjct: 62  TKGQLGHEREGNKP--EQIGALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118

Query: 305 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI- 362
               D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG G E  
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +    P
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES---P 233

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 482
             +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +     
Sbjct: 234 CHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMG 293

Query: 483 EEDTGLA 489
            E T +A
Sbjct: 294 SEVTQIA 300



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 162/324 (50%), Gaps = 14/324 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH    R   +P  + AL     
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHE---REGNKPEQIGALADQHI 86

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAG 278
             V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ G
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSCG 145

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
             + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSF 203

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G V
Sbjct: 204 ALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 456
           + FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ FG
Sbjct: 264 FTFGAGSCGQLGHDS--MNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 320

Query: 457 DNERAQL--GHDTLRGCLEPTEIF 478
              R QL  GH     C  P + +
Sbjct: 321 CGARGQLGTGHTCNVKCPSPVKGY 344



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 11/321 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIST 438
            V  P  +    A H  Q+S 
Sbjct: 334 NVKCPSPVKGYWAAHSGQLSA 354



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 134/282 (47%), Gaps = 7/282 (2%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
             G LG G   +   P P+    +  + Q+ AR  K   L +
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARAGKNDCLWN 364


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 148/311 (47%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F    +V  V     H  FVL  G V+TCG N     GH  + R   +P  V AL  
Sbjct: 27  RCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRR---KPEQVGALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 275
                V+ G   T  L  +G V + G   +GQ+G     +    P++I  L +V  +VQ+
Sbjct: 84  QIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDV-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++ +  ++S+G      LG G E   E  PR I++    GI    ++AG  
Sbjct: 143 ACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSL--SGIPFAHIAAGGG 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H  AL  SG ++ WG+   G LG  DE D+ +P  L SL+S   + +C  +  T  L   
Sbjct: 201 HSFALTISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 453
           G V+ FG  G+G LG      ++  + PR +  L    V+QI+ G  HT+  V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  G   T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS--RRKPEQVG 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+    +V ++ G ++ LA+   G V+S+G      +G     + ++ PR I++     
Sbjct: 80  ALD-AQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           + +V+V+ G  H +AL     +++WG+   G LG G EI K   P  + SL       + 
Sbjct: 137 VQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGGHSFALTISGAIFGWGRNKFGQLGLTDE--TDRNV-PALLKSLRSQKIIHICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  HTL +++   VFS G ++ G +G             I   S   +VQV+   +H
Sbjct: 89  VSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHH 148

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  + +   +F+ G N     G     +    PR +++L G+P   + AG   +  LTI 
Sbjct: 149 SLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTIS 208

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G +   G N  GQLG  D  DR  P  +  L     ++ I  G  +  A+T  G V++FG
Sbjct: 209 GAIFGWGRNKFGQLGLTDETDRNVPALLKSLRS-QKIIHICCGEDHTAALTKEGGVFTFG 267

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCG 354
           +G    LGH   + E+ PR +  F   G  V +++ G +H +A + SSG +Y++G G  G
Sbjct: 268 AGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNG 325

Query: 355 ALGHGDEIDKTLP 367
            LG G  I++  P
Sbjct: 326 QLGTGSTINRKSP 338



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +     ++    A  +V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHDKSRRKP---EQVGALDAQIIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQVF+ G       G       I  PR +++L  V   QV  G + +  L+    + +
Sbjct: 101 DKGQVFSWGHAVYGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFS 160

Query: 241 CGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G  + +   P+ I  L  +     IAAG  +  A+T +G ++ +G    
Sbjct: 161 WGQNQYGQLGLGLEIKKECAPRHIKSLSGI-PFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  ++ D   P  +++ R + I  + +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKI--IHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+     +  +G +Y FG  G G LG
Sbjct: 278 STNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 8/207 (3%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q+  G +H+L +S +S +FS G +  G LG G E  +  +   I   S      ++A  
Sbjct: 140 VQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  +  SG +F  G N     G  D T+R +  P L+++L+      +  G + T  L
Sbjct: 200 GHSFALTISGAIFGWGRNKFGQLGLTDETDRNV--PALLKSLRSQKIIHICCGEDHTAAL 257

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGV 290
           T  G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  + LA V  +G 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV--FELMGSIVTQIACGRQHTLAFVPSSGR 315

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           +YSFG G N  LG G   +   P  ++
Sbjct: 316 IYSFGLGGNGQLGTGSTINRKSPFTVK 342


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 81  LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 140

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 141 TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 192

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 193 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 250

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 251 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 310

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 311 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 367

Query: 478 F 478
            
Sbjct: 368 L 368



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 109 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 164

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 165 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 223

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 224 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 281

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 282 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 341

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 342 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 398

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 399 GCGARGQLG 407



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 122 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 178

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 179 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 238

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 239 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 297

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 298 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 355

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 356 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 412

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 413 NVKCPSPVKGYWAAHSGQLS 432



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 166 VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 224

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 225 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 284

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 285 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 343

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 344 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 401

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 402 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 456


>gi|229576492|gb|ACQ82636.1| At3g15430-like protein [Solanum quitoense]
 gi|229576494|gb|ACQ82637.1| At3g15430-like protein [Solanum quitoense]
          Length = 91

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 74/90 (82%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLCAL  IYA +  N Q ELL
Sbjct: 2   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCALSPIYASLHCNAQEELL 61

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 62  KRCNDNWKRLLRFLQAVEQSSDMVETSAGN 91


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 150/307 (48%), Gaps = 19/307 (6%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
           T GQLGH    ++P  + I  L +   ++ +A G S+ LA++  G ++S+G+GS+  LG 
Sbjct: 62  TKGQLGHEREGNKP--EQIGALADQ-HIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118

Query: 305 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI- 362
               D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG G E  
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +    P
Sbjct: 177 SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES---P 233

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 482
             +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +     
Sbjct: 234 CHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMG 293

Query: 483 EEDTGLA 489
            E T +A
Sbjct: 294 SEVTQIA 300



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQ-TILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLGHDS--MNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 11/321 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNK---PEQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIST 438
            V  P  +    A H  Q+S 
Sbjct: 334 NVKCPSPVKGYWAAHSGQLSA 354



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLSS---------------LKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVTAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL   G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVTAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  +G V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 137/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QVTAG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T NG V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKNGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 130/252 (51%), Gaps = 5/252 (1%)

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           G   +Q  +G   +  L   G VH+CG N+ GQLG         PK I  LE +  V  +
Sbjct: 33  GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETL-RVELV 91

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           + G  + LAV   G V+++G+GS   LG GE +   L P+ I+T    GI +++VS G+ 
Sbjct: 92  SCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTL--TGIKIIQVSCGNY 149

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G V++WG    G LG G E+  +  P+ + SL      QV A    +F L  
Sbjct: 150 HSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSL 209

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +G+ +G+G    G L F    V  +  +PR + +L+   V  IS G  HT V+T  G++F
Sbjct: 210 SGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVF 269

Query: 454 GFGDNERAQLGH 465
            FGDN   QLGH
Sbjct: 270 TFGDNSCGQLGH 281



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 149/302 (49%), Gaps = 14/302 (4%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
           P    + Q ++ E H+  +L  G V +CGDNS    G R   R   +P+ ++AL+ +  +
Sbjct: 31  PGGPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREE-QPKPIQALETLRVE 89

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGP 279
            V+ G   +  +  +G V   G+ + GQLG G+  +    P+ I  L  +  ++Q++ G 
Sbjct: 90  LVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGI-KIIQVSCGN 148

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            + LA++ +G V+S+GS S+  LG G++   +  P+ +++    GI + +V+AG  H  A
Sbjct: 149 YHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSL--DGIPLAQVAAGGAHSFA 206

Query: 339 LDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
           L  SG  + WG    G L   G    +    P  +S+LK+   V +      T VL   G
Sbjct: 207 LSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNG 266

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            V+ FG    G LG      + +   P++++ +    VSQI  G YHT+  V   G++  
Sbjct: 267 KVFTFGDNSCGQLG---HSPTAEKTGPQLMEGIEG-LVSQIDCGSYHTLAYVYTTGQVVS 322

Query: 455 FG 456
           FG
Sbjct: 323 FG 324



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 139/300 (46%), Gaps = 27/300 (9%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLG-------HGPETTQCVSFTRINFPSAAHVV 167
           Q  +G  H+LL+ S+ +V SCG +  G LG         P+  Q +   R+         
Sbjct: 38  QAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVEL------- 90

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            VS  + H+  V   G+VF  G  S    G  +       P+ ++ L G+   QV+ G  
Sbjct: 91  -VSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNY 149

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
            +  L+  G V + GSN+HGQLG G  L  + +P+ +  L+ +  + Q+AAG ++  A++
Sbjct: 150 HSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGI-PLAQVAAGGAHSFALS 208

Query: 287 GNGVVYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            +G   SFG GSN        G        +PR++   +  G  VV +S G EH   L  
Sbjct: 209 LSGT--SFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLG--VVYISCGHEHTAVLTQ 264

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +G V+T+G   CG LGH    +KT P+ +  ++  ++   C        +  TG V  FG
Sbjct: 265 NGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324


>gi|229576490|gb|ACQ82635.1| At3g15430-like protein [Solanum hirtum]
          Length = 90

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/90 (70%), Positives = 74/90 (82%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLCAL  IYA +  N Q ELL
Sbjct: 1   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCALSPIYASLHCNAQEELL 60

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 61  KRCNDNWKRLLRFLQAVEQSSDMVETSAGN 90


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 185/398 (46%), Gaps = 25/398 (6%)

Query: 96   FLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 155
            FL S     D  +T+AG+  +       +     + VF  G +    LG        +  
Sbjct: 2922 FLASDNEEEDDEKTAAGSLARKKPSGLESAATIRTKVFVWGLNDKDQLGG-------LKG 2974

Query: 156  TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            ++I  PS      A +VVQV+        V   G+++ CG+ ++   G   ++  I  PR
Sbjct: 2975 SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPR 3034

Query: 210  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
             + AL     K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+
Sbjct: 3035 QITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK 3094

Query: 268  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
                +  IA G S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V+
Sbjct: 3095 -TKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVI 3151

Query: 328  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            +V+ G  D   +AL   G+V++WG G  G LG G      +P+ +  L      Q+    
Sbjct: 3152 QVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGA 3211

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + 
Sbjct: 3212 QFSLALTKSGVVWTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLA 3268

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
            VTD G+++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3269 VTDTGQVYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 3304



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4027 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4086

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4087 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4145

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4146 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGS 4205

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4206 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4262

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4263 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4291



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 148/321 (46%), Gaps = 29/321 (9%)

Query: 155 FTRINFP------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 208
           +  +N P      S+  V Q+  SE     +  SG V++    S+              P
Sbjct: 427 YANVNGPIQCKALSSLGVTQIVCSEKGFLILSSSGAVYSQNYKST-----------TLAP 475

Query: 209 RLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
            L+  L      ++ A  +   +L +   G V + G    G+LGHGDT     PK I   
Sbjct: 476 MLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTF 535

Query: 267 --EEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             ++ G  VV +A G +Y  A+T +G +Y++G G+   LGHG   D+  P  +  F  KG
Sbjct: 536 NGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAF--KG 593

Query: 324 IHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           + VV V+  +GD   +A+  +G V++WG G  G LG G       P+ +  L+    V+V
Sbjct: 594 LKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKV 653

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
           C   + +  L   G VY +G      LG    G  + V  P++LDSL+   V  ++ G  
Sbjct: 654 CCGSQFSVALTKDGQVYTWGKGDNQRLG---HGTDEHVRYPKLLDSLQGKKVVDVAVGST 710

Query: 442 HTVVVTDRGRLFGFGDNERAQ 462
           H + +TD G +  +G N++ Q
Sbjct: 711 HCLALTDDGEVLSWGSNDKLQ 731



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 4041 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4099

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4100 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4158

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4159 LTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4216

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4217 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4276

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4277 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4313



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 112/202 (55%), Gaps = 9/202 (4%)

Query: 272 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVV 327
           +V++AA P   + LA++ NG V+S+G G    LGHG+     +P+ I TF  ++ G HVV
Sbjct: 486 IVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVV 545

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARK 385
            V+ G  +  A+ + G +YTWG+G  G LGHG   D+T P  +++ K    V V   +  
Sbjct: 546 HVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGD 605

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            +T  + + G V+ +G   +G LG   RG SD    P++++ L+   + ++  G   +V 
Sbjct: 606 AQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 662

Query: 446 VTDRGRLFGFGDNERAQLGHDT 467
           +T  G+++ +G  +  +LGH T
Sbjct: 663 LTKDGQVYTWGKGDNQRLGHGT 684



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 121/249 (48%), Gaps = 8/249 (3%)

Query: 114  QMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
            ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A 
Sbjct: 4040 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAG 4098

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 230
              H+A +  SG++FT G       GH D+   + +P+LV+AL+G     V   +G   T 
Sbjct: 4099 GAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDVACGSGDAQTL 4157

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 4158 CLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VVKVECGSQFSVALTKSGA 4216

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG 
Sbjct: 4217 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4274

Query: 351  GYCGALGHG 359
               G LG G
Sbjct: 4275 NDEGQLGDG 4283



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G ++  G N  GQLG  +      P S   L  +  V Q+  G   + AVT +G +Y+ G
Sbjct: 3951 GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPV-QLIGGEQTLFAVTADGKLYATG 4009

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+   G 
Sbjct: 4010 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4069

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG    G 
Sbjct: 4070 LGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG---HGD 4126

Query: 416  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4127 SEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKI 4186

Query: 474  PTEI 477
            P +I
Sbjct: 4187 PMKI 4190



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 130/291 (44%), Gaps = 26/291 (8%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF----PSAAHVVQVSASENH 175
           G+++  L SN  VFS G    G LGHG +TT       I       +  HVV V+    +
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLGHG-DTTYLEEPKMIGTFNGKQAGKHVVHVACGSTY 553

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 234
           +A +   G+++T G  +    GH  +      P +V A KG+    V  G      L + 
Sbjct: 554 SAAITADGELYTWGRGNYGRLGHGSSEDQT-TPMVVTAFKGLKVVDVACGSGDAQTLAVT 612

Query: 235 -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY+
Sbjct: 613 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVYT 671

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G G N  LGHG       P+ + +   +G  VV V+ G  H +AL   G V +WG    
Sbjct: 672 WGKGDNQRLGHGTDEHVRYPKLLDSL--QGKKVVDVAVGSTHCLALTDDGEVLSWGSN-- 727

Query: 354 GALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
             L H D +  +K  P+ L  L S           K  V +  G    F W
Sbjct: 728 DKLQHFDTLFSNKKQPKALPGLNS-----------KHIVGISCGPGQSFAW 767



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 21/210 (10%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QI       L ++ +G VYS     N+      +   L P  I     + I  +    
Sbjct: 444 VTQIVCSEKGFLILSSSGAVYS----QNY------KSTTLAPMLIHVLSSRKIVKLAAHP 493

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-----SHLAVQVCARKR 386
             +H +AL S+G V++WG G  G LGHGD      P+ + +        H+    C    
Sbjct: 494 DGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTY 553

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTV 444
              +  D G +Y +G   +G LG    G S+    P ++ + +   V  ++  +G   T+
Sbjct: 554 SAAITAD-GELYTWGRGNYGRLG---HGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTL 609

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            VT+ G+++ +GD +  +LG     GC  P
Sbjct: 610 AVTENGQVWSWGDGDYGKLGRGGSDGCKTP 639



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4151 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGLGVVKVECGSQFSV 4209

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4210 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4268

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4269 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4314


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 156/326 (47%), Gaps = 24/326 (7%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            HAA V + G+VFT G+ S    GH   +  +  P+LVEAL     + V  G      +T
Sbjct: 322 KHAALVTKQGEVFTWGEESGGRLGH-GVDCDVSHPQLVEALASSTTEVVACGEYHACAVT 380

Query: 234 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGV 290
           + G +++ G  TH  G LGHG+ +    PK +  PLE +  V  IA GP +   VT  G+
Sbjct: 381 LSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLEGL-RVASIACGPWHTALVTTTGL 439

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------- 339
           +++FG G+   LGH ++     PR +++   KG+  VR + G  H  A+           
Sbjct: 440 LFTFGDGTFGVLGHNDRKSAYSPREVESL--KGLRTVRAACGVWHTAAVVEVMVGSSSAG 497

Query: 340 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
             SSG ++TWG G  G LGHGD+  + +P  +++L  H   QV      T  L   G V+
Sbjct: 498 SCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQVACGYSLTVALTTKGGVF 557

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             G   +G LG P    +D  L   +   L   +V  I+ G +H  V+T    ++ +G  
Sbjct: 558 TMGSSTYGQLGDPQ---ADGKLPGLVEGKLVEAYVEDIACGAHHVAVLTHNSEVYTWGKG 614

Query: 459 ERAQLGHDTLRGCLEPTEIFIQEMEE 484
              +LGH  L     PT   ++ ++E
Sbjct: 615 ANGRLGHGDLEDRNTPT--LVEALKE 638



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 134/286 (46%), Gaps = 22/286 (7%)

Query: 106 IVETSAGNQMQITT-GRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP 161
           +VE  A +  ++   G YH   ++ S  ++S G      G+LGHG + +  +   R+N P
Sbjct: 357 LVEALASSTTEVVACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIP-KRVNGP 415

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V  ++    H A V  +G +FT GD +    GH D  +  + PR VE+LKG+   
Sbjct: 416 LEGLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHND-RKSAYSPREVESLKGLRTV 474

Query: 221 QVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
           +   G+  T  +               G + T G    G+LGHGD   R  P  +A L +
Sbjct: 475 RAACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVD 534

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
             +  Q+A G S  +A+T  G V++ GS +   LG   Q D   P  ++  +    +V  
Sbjct: 535 -HNFRQVACGYSLTVALTTKGGVFTMGSSTYGQLGD-PQADGKLPGLVEG-KLVEAYVED 591

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           ++ G  HV  L  +  VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 592 IACGAHHVAVLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALK 637



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 15/277 (5%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 303 PKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 362

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 325
              + V +A G  +  AVT +G +YS+G G++    LGHG       P+ +     +G+ 
Sbjct: 363 SSTTEV-VACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNG-PLEGLR 420

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  ++ G  H   + ++G ++T+G G  G LGH D      P  + SLK    V+     
Sbjct: 421 VASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRAACGV 480

Query: 386 RKTFVLVDT----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
             T  +V+            S   F W G G  G    G  ++ L P  + +L  H+  Q
Sbjct: 481 WHTAAVVEVMVGSSSAGSCSSGKLFTW-GDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQ 539

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           ++ G   TV +T +G +F  G +   QLG     G L
Sbjct: 540 VACGYSLTVALTTKGGVFTMGSSTYGQLGDPQADGKL 576



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 16/228 (7%)

Query: 117 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G +HT L++ + + F+ G    GVLGH  +     S   +        V+ +    H
Sbjct: 424 IACGPWHTALVTTTGLLFTFGDGTFGVLGHN-DRKSAYSPREVESLKGLRTVRAACGVWH 482

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH D  + +  P  V AL     +QV 
Sbjct: 483 TAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLV-PTCVAALVDHNFRQVA 541

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT +G V T GS+T+GQLG     D   P  +        V  IA G  ++ 
Sbjct: 542 CGYSLTVALTTKGGVFTMGSSTYGQLGDPQA-DGKLPGLVEGKLVEAYVEDIACGAHHVA 600

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
            +T N  VY++G G+N  LGHG+  D   P  ++  + K +  +   A
Sbjct: 601 VLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGA 648



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 10/188 (5%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           ++  GSG    L      D L P+ +++     + V  ++ G +H   +   G V+TWG+
Sbjct: 287 IHRIGSGGAINL------DALLPKPLESALV--LDVQLIACGGKHAALVTKQGEVFTWGE 338

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LGHG + D + P+ + +L S     V   +     +  +G +Y +G  G  +LG 
Sbjct: 339 ESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHACAVTLSGDLYSWG-DGTHNLGL 397

Query: 411 PDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
              G       P R+   L    V+ I+ G +HT +VT  G LF FGD     LGH+  +
Sbjct: 398 LGHGNDISHWIPKRVNGPLEGLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRK 457

Query: 470 GCLEPTEI 477
               P E+
Sbjct: 458 SAYSPREV 465


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 155/346 (44%), Gaps = 28/346 (8%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETT-QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           L  N  V+S G +  G+LGH    +       RI       + Q+S  + H A V + G+
Sbjct: 97  LTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGE 156

Query: 185 VFTCGDNSSFCCGHR------------------DTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V+T G+      GH                   D  +    P+ +E+L  +  KQV  G+
Sbjct: 157 VYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGI 216

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            FT  L+  G V+T G N +G LG+  D     TP+ I  L ++   V+I+AG S+  A+
Sbjct: 217 QFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDI---VKISAGYSFCAAI 273

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T  G +Y++G+  N  LG+ +   + +P  +  F  +   +V VS GD  + AL   G +
Sbjct: 274 TKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQN-SIVDVSCGDNFIAALTQQGQL 332

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           YTWG G  G LGHG++ D   P  +   K  +    C      F+  D   +Y FG    
Sbjct: 333 YTWGFGGDGQLGHGNKSDLYAPRHV-EFKQKIIKIACGGSHAAFITEDN-QLYQFGRGSE 390

Query: 406 GSLGFPDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDR 449
           G LG      S+  +R  P ++   +   V  ++ G  HT+ +T  
Sbjct: 391 GQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 33/355 (9%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V+S G    G LG   E       T I   +   + +V A ++ +  +  +G+V++ G N
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTP-TEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109

Query: 192 SSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
                GH D  +  + +P  +E L G   KQ++ G      +T  G V+T G+   G+LG
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169

Query: 251 HGDTL-------------------DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           H + L                   D   P+ I  L  +    Q+A G  + + ++ +G V
Sbjct: 170 HEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNI-KAKQVACGIQFTVVLSEDGKV 228

Query: 292 YSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           Y+FG      LG+  +Q+    P+ I+        +V++SAG     A+   G +YTWG 
Sbjct: 229 YTFGYNQYGSLGYVSDQNSVTTPQLIKDLN----DIVKISAGYSFCAAITKQGKLYTWGN 284

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
              G LG+   + +T P  ++   S  + V V         L   G +Y +G+ G G LG
Sbjct: 285 NRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLG 344

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G    +  PR ++      + +I+ G  H   +T+  +L+ FG     QLG
Sbjct: 345 ---HGNKSDLYAPRHVEF--KQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLG 394



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 129/266 (48%), Gaps = 25/266 (9%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPE--TTQCVSFTRINF----------PS 162
           QI+ G++H   ++ +  V++ G+   G LGH  E    Q +   R N           P 
Sbjct: 140 QISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQ 199

Query: 163 AAHVV------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
               +      QV+        + + G+V+T G N     G+      +  P+L++ L  
Sbjct: 200 KIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLND 259

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
           +   +++AG +F   +T +G ++T G+N +GQLG+  +L +  P  +       S+V ++
Sbjct: 260 IV--KISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVS 317

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G +++ A+T  G +Y++G G +  LGHG + D   PR ++ F++K   +++++ G  H 
Sbjct: 318 CGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVE-FKQK---IIKIACGGSHA 373

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEI 362
             +     +Y +G+G  G LG G  +
Sbjct: 374 AFITEDNQLYQFGRGSEGQLGIGQNV 399



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 34/302 (11%)

Query: 206 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSI 263
           + P  +E L     K+V AG + +  LT  G V++ G N  G LGH D L  +   P+ I
Sbjct: 71  YTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERI 130

Query: 264 APLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--------------- 307
             L  +G  + QI+ G  +M AVT +G VY++G+     LGH E+               
Sbjct: 131 EKL--LGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLS 188

Query: 308 HDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH-GDEI 362
           HD LQ    P+ I++     I   +V+ G +  V L   G VYT+G    G+LG+  D+ 
Sbjct: 189 HDYLQDSMLPQKIESLGN--IKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQN 246

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
             T P+ +  L     V++ A       +   G +Y +G    G LG      S    +P
Sbjct: 247 SVTTPQLIKDLND--IVKISAGYSFCAAITKQGKLYTWGNNRNGQLG---NSQSLYQTKP 301

Query: 423 RILDSLRAHH-VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-FIQ 480
            I+    + + +  +S G      +T +G+L+ +G     QLGH        P  + F Q
Sbjct: 302 SIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQ 361

Query: 481 EM 482
           ++
Sbjct: 362 KI 363



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 20/194 (10%)

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
           +VYS+G G    LG   +++   P  I+    K I   +V AG    +AL  +G VY+WG
Sbjct: 50  IVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIK--KVEAGKSISMALTHNGEVYSWG 107

Query: 350 KGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           K   G LGH D +  + T PE +  L      Q+   +     + + G VY +G   FG 
Sbjct: 108 KNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGK 167

Query: 408 LGFPDRGVSDKVLR----------------PRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
           LG  +    ++ ++                P+ ++SL      Q++ G+  TVV+++ G+
Sbjct: 168 LGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGK 227

Query: 452 LFGFGDNERAQLGH 465
           ++ FG N+   LG+
Sbjct: 228 VYTFGYNQYGSLGY 241



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VY+WG G  G LG  +E +   P  +  L      +V A K  +  L   G VY +G   
Sbjct: 51  VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNK 110

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG  DR +S  + +P  ++ L    + QIS G +H   VT+ G ++ +G+ E  +LG
Sbjct: 111 GGILGHEDR-LSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169

Query: 465 HD 466
           H+
Sbjct: 170 HE 171


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 157/303 (51%), Gaps = 12/303 (3%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P L+ AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS---KPELIGALAGQHIVHVAC 91

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 283
           G + +  L+ +G V + G+ + GQLG     D  T P+ I  L +  +++QI+ G  + L
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQISCGNWHCL 150

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 461
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 462 QLG 464
           QLG
Sbjct: 326 QLG 328



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 145/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         I  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH     +P        E +G+     +V +A G S+ +A++  G V+S+G+GS+
Sbjct: 62  TKGQLGHESEGSKP--------ELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR I+   ++ I  +++S G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQQTI--LQISCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL      QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR+  V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 15/310 (4%)

Query: 102 HSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           H  ++ E + G       G +   L+ +  V++CG +  G LGH  E ++      I   
Sbjct: 32  HDRNVKEVACG-------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKP---ELIGAL 81

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
           +  H+V V+  E+H+  +   GQVF+ G  S    G       +  PRL++ L      Q
Sbjct: 82  AGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ 141

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           ++ G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG +
Sbjct: 142 ISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGA 200

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           +  A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L 
Sbjct: 201 HSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLT 258

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYG 399
            SG V+T+G G CG LGH    D+  P  +  L      Q+ C R      +  +G +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYA 318

Query: 400 FGWMGFGSLG 409
           FG    G LG
Sbjct: 319 FGCGTRGQLG 328



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H++ +S+   VFS G+   G LG             I   +   ++Q+S   
Sbjct: 87  VHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN 146

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 352
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLA 378
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSH---LAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           WG    G  G G  +   +PEP      H   +    C      F+L D G VY  G   
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG    G      +P ++ +L   H+  ++ G  H+V ++D+G++F +G     QLG
Sbjct: 63  KGQLGHESEGS-----KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLG 117

Query: 465 HDTLRGCLEPTEIFIQEMEEDTGL 488
             T+   +    + I+++ + T L
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQTIL 140


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 6   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 65

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 66  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 117

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 118 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 175

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 176 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 235

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 236 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 292

Query: 478 F 478
            
Sbjct: 293 L 293



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 34  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 89

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 90  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 148

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 149 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 206

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 207 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 266

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 267 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 323

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 324 GCGARGQLG 332



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 47  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 103

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 104 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 163

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 164 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 222

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 223 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 280

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 281 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 337

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 338 NVKCPSPVKGYWAAHSGQLS 357



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 91  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 149

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 150 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 209

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 210 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 268

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 269 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 326

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 327 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 381


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 183/400 (45%), Gaps = 29/400 (7%)

Query: 96   FLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 155
            FL S     D  + + G+ ++  T    ++    + VF  G +    LG        +  
Sbjct: 2929 FLASDNEEEDDDKANTGSLVRKKTSGLESVATIRTKVFVWGLNDKDQLGG-------LKG 2981

Query: 156  TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 207
            ++I  PS      A +VVQV+        V   G+V+ CG+  N     G      PI  
Sbjct: 2982 SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI-- 3039

Query: 208  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            PR + AL     K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  
Sbjct: 3040 PRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3099

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L+    +  IA G S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  
Sbjct: 3100 LK-TKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHR 3156

Query: 326  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
            V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q+  
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIEC 3216

Query: 384  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
              + +  L  +G V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H 
Sbjct: 3217 GAQFSLALTKSGVVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIIHVAVGALHC 3273

Query: 444  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
            + VTD G+++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3274 LAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGVGVVKVECGSQFSVALTKSGA 4222

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGS 4211

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS            I  P+LV++L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNSD-----------ILGPQLVQSLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  +  G  H + +T+   ++ +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDIAA 4103

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A +  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4104 GGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQT 4162

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  VG VV++  G  + +A+T +G
Sbjct: 4163 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VVKVECGSQFSVALTKSG 4221

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4222 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4279

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4280 DNDEGQLGDG 4289



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  +V+++ G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVSCGSQFSVALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V AG  H +AL     VY+W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGEKVIDVVAGSTHCLALTEDSEVYSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T P+P
Sbjct: 735 GSN--DQCQHFDTLRITKPDP 753



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLG--- 4129

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DILGPQLVQSLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGVGVVKVECGSQFSV 4215

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4320



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+VS     + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVSCGSQFSV 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           V++ GSN   Q  H DTL   +P P ++  L+    +V IA GP+   A
Sbjct: 731 VYSWGSNDQCQ--HFDTLRITKPDPTALPGLDS-KHIVGIACGPAQSFA 776



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3947 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4007 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4090


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 145/304 (47%), Gaps = 20/304 (6%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           HA  V + G+ F+ G+ S    GH  D+N  +  P+L++AL     + V  G   +  +T
Sbjct: 318 HAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALSTTNIELVACGEYHSCAVT 375

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           + G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   VT  G +++
Sbjct: 376 LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFT 435

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------DS 341
           FG G+   LGHG++     PR + +   KG+  VR + G  H  A+             S
Sbjct: 436 FGDGTFGVLGHGDRKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMVGSSSSSNCS 493

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           SG ++TWG G    LGHGD+  K +P  +++L      QV      T  L  +G VY  G
Sbjct: 494 SGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMG 553

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
              +G LG P    +D  +  R+   L    V +I+ G YH  V+T R  ++ +G     
Sbjct: 554 SPVYGQLGNPH---ADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 610

Query: 462 QLGH 465
           +LGH
Sbjct: 611 RLGH 614



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 136/290 (46%), Gaps = 19/290 (6%)

Query: 99  SVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 157
           +V+H   I   S  N   +  G YH+  ++ S  +++ G    G+LGHG E +  V   R
Sbjct: 346 NVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVP-KR 404

Query: 158 INF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           +NF     HV  ++    H A V  +GQ+FT GD +    GH D  + +F PR V++LKG
Sbjct: 405 VNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVFIPREVDSLKG 463

Query: 217 VPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +   +   G+  T  +               G + T G     +LGHGD   +  P  +A
Sbjct: 464 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVA 523

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            L E  +  Q+A G S  +A+T +G VY+ GS     LG+     ++  R      +   
Sbjct: 524 ALVEP-NFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVEGKLHKS-- 580

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 581 FVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLK 630



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 20/218 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  IA G  + + VT  G  +S+G  S   LGHG   +   P+ I       I +V  + 
Sbjct: 309 VQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELV--AC 366

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS--HLAVQVCARKRKTF 389
           G+ H  A+  SG +YTWGKG  G LGHG+E+   +P+ ++ L    H++   C     T 
Sbjct: 367 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG-PYHTA 425

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD- 448
           V+   G ++ FG   FG LG  DR     V  PR +DSL+     + + G++HT  V + 
Sbjct: 426 VVTSAGQLFTFGDGTFGVLGHGDR---KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEV 482

Query: 449 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
                       G+LF +GD ++++LGH      L PT
Sbjct: 483 MVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPT 520



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 25/294 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALS 357

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 358 TT-NIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVN-FLMEGIHVS 415

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            ++ G  H   + S+G ++T+G G  G LGHGD     +P  + SLK    V+       
Sbjct: 416 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWH 475

Query: 388 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
           T  +V+             G ++ +G      LG  D+   +  L P  + +L   +  Q
Sbjct: 476 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDK---EPKLVPTCVAALVEPNFCQ 532

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 482
           ++ G   TV +T  G ++  G     QLG+    G + PT +       F++E+
Sbjct: 533 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKV-PTRVEGKLHKSFVEEI 585



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 138/340 (40%), Gaps = 21/340 (6%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 178
           G++  L+      FS G    G LGHG ++   V   + I+  S  ++  V+  E H+  
Sbjct: 316 GQHAVLVTKQGESFSWGEESEGRLGHGVDSN--VQHPKLIDALSTTNIELVACGEYHSCA 373

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           V  SG ++T G       GH +        R+   ++G+    +  G   T  +T  G +
Sbjct: 374 VTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQL 433

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQIAAGPSYMLAVT 286
            T G  T G LGHGD      P+ +  L+               +VV++  G S   +  
Sbjct: 434 FTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVG-SSSSSNC 492

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++++G G    LGHG++  +L P  +           +V+ G    VAL +SG+VY
Sbjct: 493 SSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNF--CQVACGHSLTVALTTSGHVY 550

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           T G    G LG+     K        L      ++        VL     VY +G    G
Sbjct: 551 TMGSPVYGQLGNPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 610

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            LG    G +D    P +++SL+   V  I+ G   T  V
Sbjct: 611 RLG---HGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 16/224 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT +++++  +F+ G    GVLGHG   +  +    ++       V+ +    H
Sbjct: 417 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIP-REVDSLKGLRTVRAACGVWH 475

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH D   P   P  V AL      QV 
Sbjct: 476 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD-KEPKLVPTCVAALVEPNFCQVA 534

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++ 
Sbjct: 535 CGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVEGKLHKSFVEEIACGAYHVA 593

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            +T    VY++G GSN  LGHG+  D   P  +++ + K +  +
Sbjct: 594 VLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSI 637



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 4/171 (2%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G LGHG + +   
Sbjct: 292 KMDSLLPKALES--TIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQH 349

Query: 367 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS  V + R+  
Sbjct: 350 PKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNE-VSHWVPK-RVNF 407

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E+
Sbjct: 408 LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREV 458


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 155/316 (49%), Gaps = 25/316 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 224
           V  ++    HAA V + G+VF+ G+ S    GH  D++ P   P+L+E+L     + V  
Sbjct: 314 VQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVP--HPKLIESLSNTNIELVAC 371

Query: 225 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSY 281
           G   T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP +
Sbjct: 372 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGI-HVSSISCGPWH 430

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-- 339
              VT +G +++FG G+   LGHG++     PR I++   KG+  V+ + G  H  A+  
Sbjct: 431 TAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAVVE 488

Query: 340 ----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
                      SSG ++TWG G  G LGHGD+  K +P  + +L      QV      T 
Sbjct: 489 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTL-VEPNCQVACGHSMTV 547

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            L  +G VY  G   +G LG      +D  L  R+   L    V +I+ G YH  V+T R
Sbjct: 548 ALSRSGHVYTMGSCVYGQLG---NTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSR 604

Query: 450 GRLFGFGDNERAQLGH 465
             +F +G     +LGH
Sbjct: 605 TEVFTWGKGANGRLGH 620



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 22/291 (7%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 156
           V H   I   S  N   +  G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 352 VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP-K 410

Query: 157 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH D  + +  PR +E+LK
Sbjct: 411 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGD-RKSVSLPREIESLK 469

Query: 216 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 470 GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCV 529

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             L E     Q+A G S  +A++ +G VY+ GS     LG+ +   +L  R      +  
Sbjct: 530 VTLVEPN--CQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKS- 586

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V  ++ G  HV  L S   V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 587 -FVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALK 636



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 20/279 (7%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D P PK I  L 
Sbjct: 303 PKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLS 362

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT +G +Y++G G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 363 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 420

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + SSG ++T+G G  GALGHGD    +LP  + SLK    VQ     
Sbjct: 421 VSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGV 480

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 481 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---ESKLVPTCVVTLVEPNC 537

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            Q++ G   TV ++  G ++  G     QLG+    G L
Sbjct: 538 -QVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKL 575



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 91/183 (49%), Gaps = 10/183 (5%)

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           GSNF    G + D L P+A+++     + V  ++ G +H   +   G V++WG+   G L
Sbjct: 291 GSNF----GVKMDSLLPKALESAVV--LDVQNIACGGKHAALVTKQGEVFSWGEESGGRL 344

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRG 414
           GHG + D   P+ + SL +     V   +  T  +  +G +Y  G G   +G LG  ++ 
Sbjct: 345 GHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQ- 403

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           VS  V + R+   L   HVS IS G +HT VVT  G+LF FGD     LGH   +    P
Sbjct: 404 VSHWVPK-RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLP 462

Query: 475 TEI 477
            EI
Sbjct: 463 REI 465



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 19/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT ++++S  +F+ G    G LGHG    + VS  R I        VQ +    
Sbjct: 424 ISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDR--KSVSLPREIESLKGLRTVQAACGVW 481

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D    +  P  V  L    C QV
Sbjct: 482 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV-PTCVVTLVEPNC-QV 539

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G + T  L+  GHV+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 540 ACGHSMTVALSRSGHVYTMGSCVYGQLGNTQA-DGKLPIRVEGKLSKSFVEEIACGAYHV 598

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T    V+++G G+N  LGHG+ +D   P  ++  + K +  +
Sbjct: 599 AVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSI 643



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 10/194 (5%)

Query: 94  LRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCV 153
           L+ L++V+ +  +  T+A   +++  G   +   S+  +F+ G    G LGHG + ++ V
Sbjct: 468 LKGLRTVQAACGVWHTAA--VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLV 525

Query: 154 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR--DTNRPIFRPRLV 211
               +         QV+   +    + +SG V+T G       G+   D   PI   R+ 
Sbjct: 526 PTCVVTL--VEPNCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPI---RVE 580

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
             L     +++  G      LT R  V T G   +G+LGHGDT DR TP  +  L++   
Sbjct: 581 GKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKD-KQ 639

Query: 272 VVQIAAGPSYMLAV 285
           V  IA G ++  A+
Sbjct: 640 VKSIACGTNFTAAI 653



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 9/127 (7%)

Query: 116 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFP---SAAHVVQVSA 171
           Q+  G   T+ +S S  V++ GS + G LG+    TQ      I      S + V +++ 
Sbjct: 538 QVACGHSMTVALSRSGHVYTMGSCVYGQLGN----TQADGKLPIRVEGKLSKSFVEEIAC 593

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H A +    +VFT G  ++   GH DTN     P LVEALK    K +  G NFT  
Sbjct: 594 GAYHVAVLTSRTEVFTWGKGANGRLGHGDTN-DRNTPTLVEALKDKQVKSIACGTNFTAA 652

Query: 232 LTIRGHV 238
           + +   V
Sbjct: 653 ICLHKWV 659


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDAVAVPRVIQKLNQQTI--LQVSCGNWHSLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G +    L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H   +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHNLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PR+++ L      QV+ G   +  L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHNLALSDRGQLFSWGAGSDGQLGLM-TTEDAVAVPRVIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H+  +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARSDRFKYHIVKQIFSGGDQTFVL 377


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGDQTFVL 377


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 132/245 (53%), Gaps = 8/245 (3%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++ CG  T+G+LG G   + PTPK +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 3293 GKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3352

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G +  LGHG +    +P+ I+T R K I    ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3353 GEGEDGKLGHGNRLTLEKPKLIETLRTKRIR--DIACGSSHSAAITSSGELYTWGLGEYG 3410

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             LGHGD   +  P+ +++L  H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3411 RLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG--- 3467

Query: 413  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            RG S+    P  ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3468 RGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVR 3527

Query: 473  EPTEI 477
            +PT I
Sbjct: 3528 KPTPI 3532



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 17/329 (5%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +RI  P+          +Q++  E     V   G+++  G  +    G   T+  +  P 
Sbjct: 4396 SRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDS-VTTPT 4454

Query: 210  LVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAP 265
            LVE+L+ V  K+V   +G      L+  G V + G    G+LGHG  D+ DRP  K I  
Sbjct: 4455 LVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRP--KLIEA 4512

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +G V+ IA G ++   +T  G V ++G G    LGHG+  D+LQP+ ++        
Sbjct: 4513 LSGIG-VIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAI 4571

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + +     V++WG G  G LG G      +P  + SL      +V    
Sbjct: 4572 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGS 4631

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +GSVY +G   +  LG    G +D V RP+ + +L+   +  I+TG  H V 
Sbjct: 4632 QFSVALTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4688

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             +D G +F +GDN+  QLG  T+     P
Sbjct: 4689 CSDGGEVFTWGDNDEGQLGDGTVSAIQRP 4717



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 10/320 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+EAL G+    +  G
Sbjct: 4467 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIEALSGIGVIDIACG 4524

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T +GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4525 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4584

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ V +V  G +  VAL  SG 
Sbjct: 4585 ITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL--AGLGVTKVECGSQFSVALTRSGS 4642

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG+      P+ +++L+    + +           D G V+ +G   
Sbjct: 4643 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDND 4702

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             G LG    G    + RPR++ SL+  H+ ++  G  HT+ ++               L 
Sbjct: 4703 EGQLG---DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAVRPPPSPPLE 4759

Query: 465  HDTLRGCLEPTEIFIQEMEE 484
            +D +R  + P ++ +  ++E
Sbjct: 4760 YDLVRD-IAPEDVLVYSIKE 4778



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 207
            +++  P+ + V      + ++        V Q G+++ CG+  N     GH   N  +  
Sbjct: 3260 SKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 3316

Query: 208  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P+ V  L     K+V   +G      LT+ G V + G    G+LGHG+ L    PK I  
Sbjct: 3317 PKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIET 3376

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L     +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ +       + 
Sbjct: 3377 LR-TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHRVV 3435

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   + D   + L   G V++WG G  G LG G     ++P  +  L     +Q+    
Sbjct: 3436 QVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGA 3495

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H + 
Sbjct: 3496 QFSLALTKSGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3552

Query: 446  VTDRGRLFGFGDNERAQLG 464
            VTD G+++ +GDN+  Q G
Sbjct: 3553 VTDSGQVYAWGDNDHGQQG 3571



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 16/324 (4%)

Query: 143 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 202
             HG  +T   S   I  P+   V QV+ SE     +  +GQV +   ++   C   DT 
Sbjct: 563 FAHG--STSRYSTATIELPAGVQVRQVACSETSIYILTTTGQVLSLQHSN---CHTPDTT 617

Query: 203 RPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
            P    + +E L+ V   Q+ A         LT  G V + G+   G+LGHGDT  +  P
Sbjct: 618 AP----KPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIP 673

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
             I  L E   V  +  G SY  A+T  G +Y++G G+   LGHG   D+  P  +Q  +
Sbjct: 674 TRIVALAE-RQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLK 732

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAV 379
           ++ +  V +  GD H + +  +G VY WG G  G LG+G     ++P  +   + S  AV
Sbjct: 733 QQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAV 792

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
           +V +    +  L   G+VY +   G G  G    G S+    P+ + +L   ++  ++ G
Sbjct: 793 KVFSGSHFSVALGRDGTVYSW---GKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVG 849

Query: 440 LYHTVVVTDRGRLFGFGDNERAQL 463
           L H + +T  G L+G+G N+  QL
Sbjct: 850 LAHCLALTASGELYGWGRNDFQQL 873



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 156/339 (46%), Gaps = 21/339 (6%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 168
            + I  G     ++S +  +++CG    G LG G     P   Q    ++         V 
Sbjct: 3277 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQY----VVKKVA 3332

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLN 227
            V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E L+    + +  G +
Sbjct: 3333 VHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIETLRTKRIRDIACGSS 3390

Query: 228  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAV 285
             +  +T  G ++T G   +G+LGHGD   +  PK +  L +   VVQ+A G   +  L +
Sbjct: 3391 HSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALAD-HRVVQVACGSRDAQTLCL 3449

Query: 286  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
            T  G+V+S+G G    LG G       P  ++  R  G+ V+++  G +  +AL  SG V
Sbjct: 3450 TEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVE--RLNGVGVMQIECGAQFSLALTKSGEV 3507

Query: 346  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
            +TWGKG    LGHG +     P P+  L+    + V         + D+G VY +G    
Sbjct: 3508 WTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDH 3567

Query: 406  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
            G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3568 GQQGSGNTIVNKK---PSLVLGLDGIFVNRVACGSSHSV 3603



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 121/248 (48%), Gaps = 10/248 (4%)

Query: 234  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            +   V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +
Sbjct: 3239 LSSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKL 3295

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            Y+ G G+N  LG G  ++   P+ +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 3296 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3355

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
              G LGHG+ +    P+ + +L++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3356 EDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3415

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
            D       L+P+++ +L  H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3416 DNCTQ---LKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSE 3472

Query: 470  GCLEPTEI 477
            GC  P ++
Sbjct: 3473 GCSIPHQV 3480



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 125/285 (43%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L S+  VFS G    G LGHG       S+ R   I   S   V+ 
Sbjct: 4465 KKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIEALSGIGVID 4520

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +   G V T G       GH D+   + +P+LVEAL G     +  G   
Sbjct: 4521 IACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGD 4579

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T
Sbjct: 4580 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VTKVECGSQFSVALT 4638

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA    G V+
Sbjct: 4639 RSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDGGEVF 4696

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  + SL+    V+V      T  L
Sbjct: 4697 TWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4741



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 242  GSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            G N  GQLG   G  +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+
Sbjct: 4383 GHNHRGQLGGLDGSRIKMPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGA 4438

Query: 299  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
               LG G       P  +++ +   I  V V++G +H +AL S G V++WG+G  G LGH
Sbjct: 4439 GGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4498

Query: 359  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
            G+      P+ + +L     + +      +  +   G V  +G   +G LG  D   S+ 
Sbjct: 4499 GNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD---SED 4555

Query: 419  VLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
             L+P+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +
Sbjct: 4556 QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMK 4615

Query: 477  I 477
            I
Sbjct: 4616 I 4616



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 19/216 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRV 329
           V Q+A   + +  +T  G V S        L H   H  D   P+ I+    + +++V++
Sbjct: 584 VRQVACSETSIYILTTTGQVLS--------LQHSNCHTPDTTAPKPIEGL--ESVNIVQL 633

Query: 330 SAGDE--HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
           +A  E  HV+AL ++G V++WG G  G LGHGD   K +P  + +L       V      
Sbjct: 634 AAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSY 693

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVV 445
           +  +   G +Y +G   +G LG    G S+    P I+  L+   V  ++ G    H++ 
Sbjct: 694 SAAITAAGELYTWGRGTYGRLG---HGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLC 750

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           VTD G ++ +GD +  +LG+ T  G   P  I + +
Sbjct: 751 VTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQ 786



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 6/233 (2%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+   L +   VFS G+   G LGHG  +++ +  TRI   +   V  V    +++A +
Sbjct: 639 GRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIP-TRIVALAERQVTGVFCGSSYSAAI 697

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL--TIRGH 237
             +G+++T G  +    GH ++      P +V+ LK      V  G      L  T  G 
Sbjct: 698 TAAGELYTWGRGTYGRLGHGNSEDKHL-PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGI 756

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V+  G    G+LG+G       P +I   +     V++ +G  + +A+  +G VYS+G G
Sbjct: 757 VYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKG 816

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
               LGHG       P+AIQ    +G ++V ++ G  H +AL +SG +Y WG+
Sbjct: 817 HGGRLGHGHSEHTASPKAIQAL--EGKNIVDLAVGLAHCLALTASGELYGWGR 867


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 151/312 (48%), Gaps = 29/312 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  SKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +T P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGH ++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV 288

Query: 478 FIQEMEEDTGLA 489
                 E T +A
Sbjct: 289 LELMGSEVTQIA 300



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 161/323 (49%), Gaps = 16/323 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   + +V+   NH+ F+L+ G+V+TCG NS    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN----KPEQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG    G  +  + PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG---HGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQL--GHDTLRGCLEPTE 476
           G   R QL  GH     C  P +
Sbjct: 320 GCGARGQLGTGHTCNVKCPSPVK 342



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNSKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G   D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 GSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 133/276 (48%), Gaps = 7/276 (2%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGHG  +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHGSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
             G LG G   +   P P+    +  + Q+ AR  +
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADR 358


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 21/325 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 226 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 519

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 520 LTTSGQVFTMGSTVYGQLGNLQ---TDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 576

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPT 475
            ++ +G     +LGH  L     PT
Sbjct: 577 EVYTWGKGANGRLGHGDLEDRKVPT 601



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 234 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 616



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 21/301 (6%)

Query: 201 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 318
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRI-A 383

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 443

Query: 379 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 500

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 483
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 501 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 560

Query: 484 E 484
           E
Sbjct: 561 E 561


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLTTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL   G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+    V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEGGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  +G V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGL-TTTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T NG V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKNGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARPDRFKYHIVKQIFSGGDQTFVL 377


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G+++  +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   + QLG
Sbjct: 320 GCGAKGQLG 328



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEYPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-TQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 AKGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 152/328 (46%), Gaps = 26/328 (7%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           HA  V + G++F+ G+ S    GH      +  P+L++ L G+  + V  G N T  +T 
Sbjct: 309 HAVLVTKPGEIFSWGEESGGRLGH-GIKADVPNPKLIDTLAGMNIELVACGENHTCAVTF 367

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++T G   +  G LGHG       PK I    E   V  ++ GP +  AVT  G ++
Sbjct: 368 SGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLF 427

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------- 339
           +FG G+   LGHG+      PR ++T R  G+  +RVS G  H  A              
Sbjct: 428 TFGDGTFGALGHGDHSSATVPREVETLR--GLRTIRVSCGVWHTAAAVEITTESSSPGGS 485

Query: 340 --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
              + G ++TWG G    LGHGD+  +  PE + +L      QV      T  L   G V
Sbjct: 486 GSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHNLTLALTAAGRV 545

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           Y  G   +G LG P    + KV  P I++  +    + +I+ G YH  V+T +  ++ +G
Sbjct: 546 YTMGSTSYGQLGNPR--ATGKV--PAIVEGKIAGKIIEEIACGSYHVAVLTSKAEVYTWG 601

Query: 457 DNERAQLGHDTLRGCLEPTEI-FIQEME 483
                QLGH   +   +PT + F+++ +
Sbjct: 602 KGTNGQLGHGDNKDRNQPTVVDFLRDKQ 629



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 23/281 (8%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +++T AG  ++ +  G  HT  ++ S     +  G+  CG+LGHG E +  +        
Sbjct: 343 LIDTLAGMNIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDM 402

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
              HV  VS    H A V   GQ+FT GD +    GH D +     PR VE L+G+   +
Sbjct: 403 EGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATV-PREVETLRGLRTIR 461

Query: 222 VTAGLNFTG---------------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           V+ G+  T                  +  G + T G+    +LGHGD   R  P+ +  L
Sbjct: 462 VSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVAL 521

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
            +  ++ Q+A G +  LA+T  G VY+ GS S   LG+     ++   AI   +  G  +
Sbjct: 522 GDE-NICQVACGHNLTLALTAAGRVYTMGSTSYGQLGNPRATGKVP--AIVEGKIAGKII 578

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P
Sbjct: 579 EEIACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQP 619



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 131/282 (46%), Gaps = 22/282 (7%)

Query: 206 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           F P+ +E+   +    +  G      +T  G + + G  + G+LGHG   D P PK I  
Sbjct: 287 FLPKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDT 346

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKG 323
           L  + ++  +A G ++  AVT +G +Y++G G+  C  LGHG +     P+ I     +G
Sbjct: 347 LAGM-NIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGG-DMEG 404

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           IHV  VS G  H  A+ S G ++T+G G  GALGHGD    T+P  + +L+    ++V  
Sbjct: 405 IHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLRGLRTIRVSC 464

Query: 384 RKRKTFVLVDT---------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
               T   V+                G ++ +G      LG  D+   +  L P  + +L
Sbjct: 465 GVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDK---EPRLFPECVVAL 521

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
              ++ Q++ G   T+ +T  GR++  G     QLG+    G
Sbjct: 522 GDENICQVACGHNLTLALTAAGRVYTMGSTSYGQLGNPRATG 563



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 25/242 (10%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G +HT  +++   +F+ G    G LGHG  ++  V    +        ++VS    H
Sbjct: 410 VSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVP-REVETLRGLRTIRVSCGVWH 468

Query: 176 AAFVLQS---------------GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
            A  ++                G++FT G+   +  GH D    +F P  V AL      
Sbjct: 469 TAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLF-PECVVALGDENIC 527

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE--VGSVVQIAAG 278
           QV  G N T  LT  G V+T GS ++GQLG+     R T K  A +E    G +++  A 
Sbjct: 528 QVACGHNLTLALTAAGRVYTMGSTSYGQLGN----PRATGKVPAIVEGKIAGKIIEEIAC 583

Query: 279 PSYMLAV-TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
            SY +AV T    VY++G G+N  LGHG+  D  QP  +   R K +  V   +    ++
Sbjct: 584 GSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAVACGSNFTAII 643

Query: 338 AL 339
            L
Sbjct: 644 CL 645



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 4/170 (2%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D   P+A+++     +H +  + G  H V +   G +++WG+   G LGHG + D   P+
Sbjct: 285 DAFLPKALESKVVLDVHYI--ACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPK 342

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 427
            + +L       V   +  T  +  +G +Y +G  G  + G    G       P RI   
Sbjct: 343 LIDTLAGMNIELVACGENHTCAVTFSGDLYTWG-DGAYNCGLLGHGSEASHWIPKRIGGD 401

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   HVS +S G +HT  VT  G+LF FGD     LGH        P E+
Sbjct: 402 MEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREV 451


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 328



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGDQTFVL 377


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 21/325 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 288 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 346

Query: 226 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 347 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 406

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 407 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 464

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 465 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 524

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 525 LTTSGQVFTMGSTVYGQLG---NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 581

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPT 475
            ++ +G     +LGH  L     PT
Sbjct: 582 EVYTWGKGANGRLGHGDLEDRKVPT 606



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 344 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 403

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 404 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 462

Query: 234 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 463 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 521

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 522 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 579

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 580 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 621



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 21/301 (6%)

Query: 201 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 270 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 329

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 318
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 330 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 389

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 390 -SLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 448

Query: 379 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 449 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 505

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 483
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 506 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 565

Query: 484 E 484
           E
Sbjct: 566 E 566


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 21/325 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 226 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  ++ GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 519

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 520 LTTSGQVFTMGSTVYGQLG---NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 576

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPT 475
            ++ +G     +LGH  L     PT
Sbjct: 577 EVYTWGKGANGRLGHGDLEDRKVPT 601



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  VS   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGP 398

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-KETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 234 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIAC 616



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 21/301 (6%)

Query: 201 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 318
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRI-A 383

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
              +G+HV  VS G  H   + S G ++T+G G  G LGHGD+     P  + SL     
Sbjct: 384 GSLEGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRT 443

Query: 379 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 500

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 483
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 501 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 560

Query: 484 E 484
           E
Sbjct: 561 E 561


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 20/266 (7%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 274
           K+V  G N + FL   G V+TCG NT GQLGH    ++P        E++G+     ++ 
Sbjct: 38  KEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP--------EQIGALADQHIIH 89

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 333
           +A G S+ LA++  G ++S+G+GS+  LGH    D +  PR I+   ++ I  ++VS G+
Sbjct: 90  VACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMI--LQVSCGN 147

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            H +AL + G  +TWG+   G LG G E   +  P+ + SL+     QV A    +F L 
Sbjct: 148 WHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALS 207

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G+V+G+G    G LG  D   +D+   P  +  LR   V  IS G  HT V+T  G +
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDE--TDRQ-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 264

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIF 478
           F FG     QLGHD++   + P  + 
Sbjct: 265 FTFGAGSFGQLGHDSMNDEVNPRRVL 290



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 160/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   + +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 31  FISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 86

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ +G + + G+ + GQLGH  T D    P+ I  L +   ++Q++ 
Sbjct: 87  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQ-QMILQVSC 145

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + +A+  +G  +++G   +  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 146 GNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSL--EGIPLAQVAAGGAHS 203

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG+   G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 263

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG   FG LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 264 VFTFGAGSFGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 321 GCGARGQLG 329



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 139/292 (47%), Gaps = 8/292 (2%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 44  GNHSIFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 100

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    GH  T   +  PRL++ L      QV+ G      L   G   
Sbjct: 101 SDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFF 160

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 161 TWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGRNN 219

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G  G LGH
Sbjct: 220 AGQLGLSDETDRQSPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGH 277

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 278 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 329



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LGH   T   V+  R I   +   ++QVS  
Sbjct: 88  IHVACGESHSLALSDQGQLFSWGAGSDGQLGH-TTTEDSVAIPRLIKKLNQQMILQVSCG 146

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G N     G          P+ V++L+G+P  QV AG   +  L
Sbjct: 147 NWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL 206

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 207 SLSGAVFGWGRNNAGQLGLSDETDRQSPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 265

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 266 TFGAGSFGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 323

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                S K H+   + +   +TFVL
Sbjct: 324 ARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKYHIVKHIFSGGDQTFVL 378


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 151/325 (46%), Gaps = 21/325 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    HAAFV + G++FT G+ S    GH    + +F PRLVE+L         A 
Sbjct: 283 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGH-GIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 226 LNF-TGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             F T  +T+ G ++T G  TH  G LGHG  +    PK IA   E   V  +  GP + 
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGPWHT 401

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             +T  G +++FG G+   LGHG++     PR +++    G+  + VS G  H  A+   
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESL--SGLRTIAVSCGVWHTAAVVEI 459

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  
Sbjct: 460 IVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVG 519

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  +G V+  G   +G LG      +D  L   + D L +  V +IS G YH   +T R 
Sbjct: 520 LTTSGQVFTMGSTVYGQLG---NLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRN 576

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPT 475
            ++ +G     +LGH  L     PT
Sbjct: 577 EVYTWGKGANGRLGHGDLEDRKVPT 601



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 20/282 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G +HT  ++ +     +  G+   G+LGHG + +  +           HV  V+   
Sbjct: 339 VACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGP 398

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H A +   G++FT GD +    GH D    +  PR VE+L G+    V+ G+  T  + 
Sbjct: 399 WHTALITSYGRLFTFGDGTFGVLGHGD-RETVQYPREVESLSGLRTIAVSCGVWHTAAVV 457

Query: 234 ------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDY-NFHKIACGHSL 516

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +T +G V++ GS     LG+ +   +L P  ++  +     V  +S G  HV AL S
Sbjct: 517 TVGLTTSGQVFTMGSTVYGQLGNLQTDGKL-PCLVED-KLASEFVEEISCGAYHVAALTS 574

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
              VYTWGKG  G LGHGD  D+ +P  + +LK  H+    C
Sbjct: 575 RNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIAC 616



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 21/301 (6%)

Query: 201 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           T   +  P+ +E+   +   Q+  G+    F+T +G + T G  + G+LGHG   D   P
Sbjct: 265 TRTDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHP 324

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 318
           + +  L    SV  +A G  +  AVT  G +Y++G G++    LGHG       P+ I  
Sbjct: 325 RLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAG 384

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
              +G+HV  V+ G  H   + S G ++T+G G  G LGHGD      P  + SL     
Sbjct: 385 C-LEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESLSGLRT 443

Query: 379 VQVCARKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           + V      T  +V+            +G ++ +G      LG  D+   D  L+P  + 
Sbjct: 444 IAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDK---DPRLKPTCVP 500

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEME 483
           +L  ++  +I+ G   TV +T  G++F  G     QLG+    G   CL   ++  + +E
Sbjct: 501 ALIDYNFHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVE 560

Query: 484 E 484
           E
Sbjct: 561 E 561


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 148/315 (46%), Gaps = 21/315 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HAA V+++G+VFT G++S    GH  T     RPRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGH-GTREDCVRPRLVESLTVSNVDFVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T  G ++T G  T+  G LGHG+ +    PK I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHTA 197

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 340
            +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 341 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     S+G ++TWG G    LGHGD+  +  P  +++L  H   +V      T  
Sbjct: 256 VTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVA 315

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  +G V   G   +G LG P    SD  +   + D +    V QI+ G YH  V+T+R 
Sbjct: 316 LTTSGQVLSMGNAVYGQLGNPH---SDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRS 372

Query: 451 RLFGFGDNERAQLGH 465
            +F +G     +LGH
Sbjct: 373 EVFTWGKGANGRLGH 387



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 121/275 (44%), Gaps = 22/275 (8%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G +HT  ++ +     +  G+   G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGT 193

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H A +   GQ+FT GD S    GH D  + +  PR VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGDL-KSVSYPREVESLSGLKTIAVACGVWHTAAIV 252

Query: 234 -------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G     +LGHGD   R  P  +A L +     ++A G S
Sbjct: 253 EVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID-HDFYRVACGHS 311

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             +A+T +G V S G   N   G  G  H + +   +   +  G  V++++ G  HV  L
Sbjct: 312 LTVALTTSGQVLSMG---NAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVL 368

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            +   V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 369 TNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALK 403



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 23/229 (10%)

Query: 265 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           PLE   V  V  +  G  +   V  NG V+++G  S   LGHG + D ++PR +++    
Sbjct: 70  PLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVS 129

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
            +  V  + G+ H  A+ ++G +YTWG G    G LGHG+++   +P+ +S     L V 
Sbjct: 130 NVDFV--ACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVA 187

Query: 381 -VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            V      T ++   G ++ FG   FG LG  D      V  PR ++SL       ++ G
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSVSYPREVESLSGLKTIAVACG 244

Query: 440 LYHTVVVTD-------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           ++HT  + +              G+LF +GD ++ +LGH      L+PT
Sbjct: 245 VWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPT 293



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 146/343 (42%), Gaps = 26/343 (7%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           ++  L++ N  VF+ G    G LGHG     CV    +   + ++V  V+  E H   V 
Sbjct: 87  KHAALVMKNGEVFTWGEDSGGRLGHGTR-EDCVRPRLVESLTVSNVDFVACGEFHTCAVT 145

Query: 181 QSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
            +G+++T GD +      GH +        R+  AL+G+    V+ G   T  +T  G +
Sbjct: 146 TTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTWHTALITSMGQL 205

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT------------ 286
            T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+             
Sbjct: 206 FTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIA-VACGVWHTAAIVEVIVTRSSSSVK 264

Query: 287 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
              G ++++G G    LGHG++   L+P  + T      +  RV+ G    VAL +SG V
Sbjct: 265 LSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFY--RVACGHSLTVALTTSGQV 322

Query: 346 YTWGKGYCGALG--HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            + G    G LG  H D     L E    +     +Q+        VL +   V+ +G  
Sbjct: 323 LSMGNAVYGQLGNPHSDGRIPCLVE--DKIVGEQVLQIACGSYHVAVLTNRSEVFTWGKG 380

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
             G LG  D    D+ + P ++++L+   V  I+ G   T  +
Sbjct: 381 ANGRLGHGD--TEDRKV-PTLVEALKDRAVRYIACGANFTAAI 420



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 128/276 (46%), Gaps = 20/276 (7%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           I  P+ +E+   +    V  G+     +   G V T G ++ G+LGHG   D   P+ + 
Sbjct: 65  ILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVE 124

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  V +V  +A G  +  AVT  G +Y++G G+     LGHG       P+ I +   +
Sbjct: 125 SL-TVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRI-SGALE 182

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS---- 375
           G+ V  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+    
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVA 242

Query: 376 ----HLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
               H A  V+V   +  + V +  G ++ +G      LG  D+   +  L+P  + +L 
Sbjct: 243 CGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDK---ETRLKPTCVATLI 299

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            H   +++ G   TV +T  G++   G+    QLG+
Sbjct: 300 DHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGN 335



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 163
           ++ G +HT LI S   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHT 248

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V  + + ++  L +G++FT GD      GH D    + +P  V  L      +V 
Sbjct: 249 AAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRL-KPTCVATLIDHDFYRVA 307

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V + G+  +GQLG+  + D   P  +        V+QIA G  ++ 
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNPHS-DGRIPCLVEDKIVGEQVLQIACGSYHVA 366

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
            +T    V+++G G+N  LGHG+  D   P  ++  + + +  +   A
Sbjct: 367 VLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGA 414



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 4/186 (2%)

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           S  +GS+  +    + D L P+ +++     + V  V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVISSTGRIDILLPKPLES--NLVLDVYHVDCGVKHAALVMKNGEVFTWGEDS 105

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHG   D   P  + SL       V   +  T  +  TG +Y +G  G  ++G   
Sbjct: 106 GGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYTWG-DGTYNVGLLG 164

Query: 413 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
            G       P RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH  L+  
Sbjct: 165 HGNDVGHWIPKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSV 224

Query: 472 LEPTEI 477
             P E+
Sbjct: 225 SYPREV 230



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 24/141 (17%)

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGA---------LGHGDEIDKTLPEPLSSLKSHLAVQ 380
           SA DE     DS G VY WG+  C           +     ID  LP+P   L+S+L + 
Sbjct: 26  SAQDE----CDSLGDVYVWGEVVCDTSVRTGSDTVISSTGRIDILLPKP---LESNLVLD 78

Query: 381 V----CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
           V    C  K    V+   G V+ +G    G LG    G  +  +RPR+++SL   +V  +
Sbjct: 79  VYHVDCGVKHAALVM-KNGEVFTWGEDSGGRLG---HGTREDCVRPRLVESLTVSNVDFV 134

Query: 437 STGLYHTVVVTDRGRLFGFGD 457
           + G +HT  VT  G L+ +GD
Sbjct: 135 ACGEFHTCAVTTTGELYTWGD 155


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 153/317 (48%), Gaps = 25/317 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G++F+ G+ +    GH   +  +  P+L+EAL     + V  G
Sbjct: 312 VQNIACGGRHAALVTKQGEIFSWGEEAGGRLGH-GVDSDVLHPKLIEALSNTNIELVACG 370

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G+ T+  G LGHG+ +    PK +  PLE +  V  I+ GP + 
Sbjct: 371 EYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGI-HVSYISCGPWHT 429

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 430 AVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTVRAACGVWHTAAVVEV 487

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPE--PLSSLKSHLAVQVCARKRKT 388
                     SSG ++TWG G  G LGHGD+  K +P    L ++K +     C     T
Sbjct: 488 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHSL-T 546

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
             L   G VY  G   +G LG P    +D  L   +   L    V +I+ G YH  V+T 
Sbjct: 547 VALTTKGHVYTMGSPVYGQLGIPQ---ADGKLPICVEWKLSESFVEEIACGAYHVAVLTS 603

Query: 449 RGRLFGFGDNERAQLGH 465
           R  ++ +G     +LGH
Sbjct: 604 RTEVYTWGKGANGRLGH 620



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 134/291 (46%), Gaps = 20/291 (6%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 156
           V H   I   S  N   +  G YHT  ++ S     +  G+  CG+LGHG + +  V   
Sbjct: 350 VLHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVP-K 408

Query: 157 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + +  PR VE+LK
Sbjct: 409 RVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLK 467

Query: 216 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           G+   +   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 468 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV 527

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           A +    +  Q+A G S  +A+T  G VY+ GS     LG   Q D   P  ++ ++   
Sbjct: 528 ALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGI-PQADGKLPICVE-WKLSE 585

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 586 SFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 636



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 118/246 (47%), Gaps = 27/246 (10%)

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 311
           G  +D   PKS+     V  V  IA G  +   VT  G ++S+G  +   LGHG   D L
Sbjct: 293 GVKMDSLFPKSLESAV-VLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVL 351

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPE- 368
            P+ I+      I +V  + G+ H  A+  SG +YTWG G   CG LGHG+++   +P+ 
Sbjct: 352 HPKLIEALSNTNIELV--ACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKR 409

Query: 369 ---PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
              PL  +  H++   C     T V+   G ++ FG   FG+LG  DR     V  PR +
Sbjct: 410 VNGPLEGI--HVSYISCG-PWHTAVVTSAGQLFTFGDGTFGALGHGDR---KSVSLPREV 463

Query: 426 DSLRAHHVSQISTGLYHTVVVTD------------RGRLFGFGDNERAQLGHDTLRGCLE 473
           +SL+     + + G++HT  V +             G+LF +GD ++ +LGH      L 
Sbjct: 464 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 523

Query: 474 PTEIFI 479
           PT + +
Sbjct: 524 PTRVAL 529



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 137/295 (46%), Gaps = 24/295 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G + + G    G+LGHG   D   PK I  L 
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALS 360

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT +G +Y++G+G+  C  LGHG Q     P+ +     +GIH
Sbjct: 361 NT-NIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNG-PLEGIH 418

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK    V+     
Sbjct: 419 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGV 478

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+    K++  R+       + 
Sbjct: 479 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTRVALVNVKPNF 536

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG----CLEP--TEIFIQEM 482
            Q++ G   TV +T +G ++  G     QLG     G    C+E   +E F++E+
Sbjct: 537 CQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWKLSESFVEEI 591



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 103/227 (45%), Gaps = 21/227 (9%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT +++++  +F+ G    G LGHG   +  VS  R +        V+ +    
Sbjct: 422 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKS--VSLPREVESLKGLRTVRAACGVW 479

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-- 220
           H A V++            SG++FT GD      GH D    +   R+  AL  V     
Sbjct: 480 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRV--ALVNVKPNFC 537

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           QV  G + T  LT +GHV+T GS  +GQLG     D   P  +        V +IA G  
Sbjct: 538 QVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQA-DGKLPICVEWKLSESFVEEIACGAY 596

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           ++  +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSI 643



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 18/198 (9%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGHG +  +
Sbjct: 470 RTVRAACGVWHTAAVVE--------VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 521

Query: 152 CVSFTRINFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPI-FR 207
            V  TR+   +   +  QV+   +    +   G V+T G       G    D   PI   
Sbjct: 522 LVP-TRVALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVE 580

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
            +L E+      +++  G      LT R  V+T G   +G+LGHGDT DR TP  +  L+
Sbjct: 581 WKLSESF----VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 636

Query: 268 EVGSVVQIAAGPSYMLAV 285
           +   V  IA G ++  A+
Sbjct: 637 D-KDVKSIACGTNFTAAI 653



 Score = 39.3 bits (90), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 9/130 (6%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQ---CVSFTRINFPSAAHVVQ 168
           N  Q+  G   T+ L +   V++ GS + G LG      +   CV +      S + V +
Sbjct: 535 NFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWKL----SESFVEE 590

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           ++    H A +    +V+T G  ++   GH DT+     P LVEALK    K +  G NF
Sbjct: 591 IACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNTPTLVEALKDKDVKSIACGTNF 649

Query: 229 TGFLTIRGHV 238
           T  + +   V
Sbjct: 650 TAAICLHKWV 659


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLMTIEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGRNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR   V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 157/309 (50%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP----EQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ +G + + G+ + GQLG     D    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVVAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 148/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKP---EQIGALADQHIVHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G       +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+ AG ++  A++ +G V+ +G  +
Sbjct: 160 TWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVVAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 132/294 (44%), Gaps = 20/294 (6%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGN 146

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALS 206

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           + G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFT 265

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 352
           FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 353 CGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
            G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 324 RGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 169/386 (43%), Gaps = 28/386 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 174
           G YH    +   VF  G S+C  +  G   +   +   +  P A     V  ++N     
Sbjct: 237 GSYHEDFDALGDVFVWGESICDGVLTGTGNSLNSTTEDVLLPKALESTIVLDAQNIACGK 296

Query: 175 -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            HA  V + G++F+ G+              + +P+ + +++G+  K +  G   T  +T
Sbjct: 297 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDVQQPKFISSVRGLGFKSLACGDFHTCAIT 355

Query: 234 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 356 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWHTAVVASSGQL 415

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 339
           ++FG GS   LGHG++     PR ++     G+ V +V+ G  H  AL            
Sbjct: 416 FTFGDGSFGALGHGDRRSTSVPREVKIL--SGLIVTKVACGVWHTAALVEVTNEASEAEV 473

Query: 340 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
             S G V+TWG G  G LGHGD   + LPE + SL +    QV      T  L  TG VY
Sbjct: 474 GSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSNENICQVACGHSLTVSLTSTGHVY 533

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             G   +G LG P    +      R+   +    V +I+ G YH  V+T +  ++ +G  
Sbjct: 534 TMGSTAYGQLGNP---TAKGNFPARVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKG 590

Query: 459 ERAQLGHDTLRGCLEPTEI-FIQEME 483
              QLGH T+    EP  + F++E +
Sbjct: 591 LNGQLGHGTIENKREPAVVGFLKEKQ 616



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 163/405 (40%), Gaps = 57/405 (14%)

Query: 23  TSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVD--LAASQLC---------ALHS-- 69
           +S R S  D   L L+S     SHG Y + F +L D  +    +C         +L+S  
Sbjct: 213 SSLRFSTNDPIRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESICDGVLTGTGNSLNSTT 272

Query: 70  ----IYAGMSRNVQIELLN----RCNG----------NWKRVLRFLQSVEHSSDIVETSA 111
               +   +   + ++  N    +C+           +W             +D+ +   
Sbjct: 273 EDVLLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDVQQPKF 332

Query: 112 GNQMQ------ITTGRYHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFPS 162
            + ++      +  G +HT  I+ S  ++S G     V  LGHG E++  +         
Sbjct: 333 ISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQ 392

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             +V  V+    H A V  SGQ+FT GD S    GH D  R    PR V+ L G+   +V
Sbjct: 393 GLYVSYVACGPWHTAVVASSGQLFTFGDGSFGALGHGD-RRSTSVPREVKILSGLIVTKV 451

Query: 223 TAGLNFTGFL-------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
             G+  T  L             + RG V T G    GQLGHGD   +  P+ +  L   
Sbjct: 452 ACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSN- 510

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
            ++ Q+A G S  +++T  G VY+ GS +   LG+         R         +    +
Sbjct: 511 ENICQVACGHSLTVSLTSTGHVYTMGSTAYGQLGNPTAKGNFPARVEGDIVEASVE--EI 568

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           + G  HV  L S   +YTWGKG  G LGHG   +K  P  +  LK
Sbjct: 569 ACGSYHVAVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLK 613



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 25/229 (10%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS---FTRI--NFPSA 163
           +  G +HT ++++S  +F+ G    G LGHG       P   + +S    T++       
Sbjct: 399 VACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHT 458

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V+   + A      GQVFT GD      GH D +  +  P  V +L      QV 
Sbjct: 459 AALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLL-PECVISLSNENICQVA 517

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAG 278
            G + T  LT  GHV+T GS  +GQLG+      PT K   P    G +V+     IA G
Sbjct: 518 CGHSLTVSLTSTGHVYTMGSTAYGQLGN------PTAKGNFPARVEGDIVEASVEEIACG 571

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             ++  +T    +Y++G G N  LGHG   ++ +P  +   + K +  +
Sbjct: 572 SYHVAVLTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAI 620


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 155/317 (48%), Gaps = 9/317 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA   +Q++  E     +   G+V+  G  +    G       +  P L+E+L+ V  K+
Sbjct: 3645 SALRPIQLAGGEQTLFAITSDGRVYATGYGAGGRLGIGGAES-VTVPSLLESLQHVFVKK 3703

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      L+  G V++ G    G+LGHG+ L    P+ I  L     VV +A G 
Sbjct: 3704 VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIESLRG-KDVVDVACGG 3762

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            ++  A+T  G +Y++G G    LGHG+  D+L+P+ ++      +  V   +GD    A+
Sbjct: 3763 AHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAI 3822

Query: 340  --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
              +  G V++WG G  G LG G      +P  + SL     ++V    + +  L + GSV
Sbjct: 3823 TDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSV 3882

Query: 398  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
            Y +G   +  LG    GV + V RP+ + +L+   V  ISTG  H VV TD+G ++ +GD
Sbjct: 3883 YTWGKGDYHRLG---HGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGD 3939

Query: 458  NERAQLGHDTLRGCLEP 474
            N+  QLG  T  G  +P
Sbjct: 3940 NDEGQLGDGTTTGIQKP 3956



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 155/336 (46%), Gaps = 15/336 (4%)

Query: 146  GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNR 203
            GP+ ++      +++  +   + V+        V QSG+ + CG+  N     GH   +R
Sbjct: 2713 GPKGSKIKVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGH---SR 2769

Query: 204  PIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
             +  P  + AL     ++V   +G      LT  G V + G    G+LGHGD     TP+
Sbjct: 2770 NVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPR 2829

Query: 262  SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
             I  L     V  +AAG ++  AVT +G +Y++G G    LGHG+   +L P+ +++   
Sbjct: 2830 CIEALNGF-RVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESL-- 2886

Query: 322  KGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
             G  VV+VS G  D   +AL   G VY+WG G  G LG G     + P  +  L      
Sbjct: 2887 VGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVC 2946

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
             V    + +  L   G VY +G   +  LG    G    V  P +++ LR   V  +S G
Sbjct: 2947 HVECGAQFSVALTCNGHVYTWGKGDYFRLG---HGSDQHVRWPTLVEGLRGKKVIGVSVG 3003

Query: 440  LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
              H + VTD G++F +GDN+  Q G+ ++     PT
Sbjct: 3004 ALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPT 3039



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 142/283 (50%), Gaps = 13/283 (4%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH +   P  RPR++E+L+G     V  G 
Sbjct: 3704 VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGN-KLPCDRPRIIESLRGKDVVDVACGG 3762

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIA--AGPSYML 283
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L  +G  V+ +A  +G +   
Sbjct: 3763 AHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEAL--LGYRVMDVACGSGDAQTC 3820

Query: 284  AVTGN--GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            A+T    G V+S+G G    LG G       P  I++    G+ +++V  G +  VAL +
Sbjct: 3821 AITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESL--SGLGIIKVECGSQFSVALSN 3878

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            +G VYTWGKG    LGHG +     P+ + +L+    + +        V  D G VY +G
Sbjct: 3879 NGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWG 3938

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
                G LG    G +  + +PR++ +L+   ++++S G  HTV
Sbjct: 3939 DNDEGQLG---DGTTTGIQKPRLVAALQNKKINRVSCGSAHTV 3978



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 150/334 (44%), Gaps = 26/334 (7%)

Query: 125  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-----AAHVVQ---VSASENHA 176
            L+  +   ++CG    G LG G           +N P      + HVV+   V +   HA
Sbjct: 2745 LVTQSGKAYACGEGSNGRLGLGHSRN-------VNSPHQITALSQHVVRKVAVHSGGRHA 2797

Query: 177  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
              +   G+VF+ G+      GH D    +  PR +EAL G   + V AG N +  +T  G
Sbjct: 2798 LALTADGRVFSWGEGDDGKLGHGDVTS-LDTPRCIEALNGFRVRDVAAGSNHSAAVTSSG 2856

Query: 237  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYS 293
             ++T G   +G+LGHGD L + TPK +  L  VG  VVQ++ G   +  LA+   G+VYS
Sbjct: 2857 ELYTWGLGEYGRLGHGDNLTQLTPKRVESL--VGQRVVQVSCGSRDAQTLALVEGGLVYS 2914

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            +G G    LG G       P  +      G+ V  V  G +  VAL  +G+VYTWGKG  
Sbjct: 2915 WGDGDFGKLGRGGSEGCSSPCLVDKL--SGLGVCHVECGAQFSVALTCNGHVYTWGKGDY 2972

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
              LGHG +     P  +  L+    + V         + D G V+ +G    G  G    
Sbjct: 2973 FRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQG---N 3029

Query: 414  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G      RP ++  +    +++++ G  H+V  T
Sbjct: 3030 GSITVNRRPTLVQGIDGIKITRVACGSSHSVAWT 3063



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 8/246 (3%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G ++  G N  GQLG  +      P     L  +  + Q+A G   + A+T +G VY+ G
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPI-QLAGGEQTLFAITSDGRVYATG 3672

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+   LG G       P  +++ +   +  V V++G +H +AL S G VY+WG+G  G 
Sbjct: 3673 YGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGK 3732

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+++    P  + SL+    V V      +  +   G +Y +G   +G LG    G 
Sbjct: 3733 LGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLG---HGD 3789

Query: 416  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR--GRLFGFGDNERAQLGHDTLRGC 471
            SD  L+P+++++L  + V  ++  +G   T  +TD   G ++ +GD +  +LG     GC
Sbjct: 3790 SDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGC 3849

Query: 472  LEPTEI 477
              PT+I
Sbjct: 3850 KIPTKI 3855



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 116/246 (47%), Gaps = 15/246 (6%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVSASENH 175
            GR+   L ++  VFS G    G LGHG     +T +C+        +   V  V+A  NH
Sbjct: 2794 GRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEAL-----NGFRVRDVAAGSNH 2848

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            +A V  SG+++T G       GH D N     P+ VE+L G    QV+ G      L + 
Sbjct: 2849 SAAVTSSGELYTWGLGEYGRLGHGD-NLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALV 2907

Query: 236  --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V++ G    G+LG G +    +P  +  L  +G V  +  G  + +A+T NG VY+
Sbjct: 2908 EGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLG-VCHVECGAQFSVALTCNGHVYT 2966

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            +G G  F LGHG       P  ++  R  G  V+ VS G  H +A+  +G V+ WG    
Sbjct: 2967 WGKGDYFRLGHGSDQHVRWPTLVEGLR--GKKVIGVSVGALHCLAVTDAGQVFAWGDNDH 3024

Query: 354  GALGHG 359
            G  G+G
Sbjct: 3025 GQQGNG 3030



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 6/239 (2%)

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V+  G N   QLG         P+++     +  +  +A G   +  VT +G  Y+ G G
Sbjct: 2700 VYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPI-SVAGGSKSLFLVTQSGKAYACGEG 2758

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
            SN  LG G   +   P  I    +  +  V V +G  H +AL + G V++WG+G  G LG
Sbjct: 2759 SNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLG 2818

Query: 358  HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
            HGD      P  + +L       V A    +  +  +G +Y +G   +G LG  D     
Sbjct: 2819 HGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQ- 2877

Query: 418  KVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
              L P+ ++SL    V Q+S G     T+ + + G ++ +GD +  +LG     GC  P
Sbjct: 2878 --LTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSP 2934


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA +VVQV+        V   G+V+ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 1799 SALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKK 1858

Query: 222  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 1859 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 1917

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 337
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1918 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVVQVACGSRDAQTL 1975

Query: 338  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 1976 ALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2035

Query: 398  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VT+ G++F +GD
Sbjct: 2036 WTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGD 2092

Query: 458  NERAQLGHDTLRGCLEPTEIFIQEME 483
            N+  Q G+ T     +PT   +Q +E
Sbjct: 2093 NDHGQQGNGTTTVNRKPT--LVQGLE 2116



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T  G V+ CG 
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 1827

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I+ L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 1828 ATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 1887

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 1888 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 1945

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  VQV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 1946 TTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLG---RGGSEGC 2002

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 2003 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 2050



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 133/269 (49%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  ++V   +G      L+  G +++ G    G+LGHG+      P+ I  
Sbjct: 2839 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIES 2898

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  V  VV IAAG ++   +T +G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 2899 LRGV-EVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVI 2957

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 2958 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3017

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3018 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3074

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3075 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3103



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 141/280 (50%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G++++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 2853 VAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 2911

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 2912 AHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQG-HRVIDVACGSGDAQTLC 2970

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T + +V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 2971 LTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3028

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3029 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3088

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 3089 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 3125



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 2818

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G +Y+WG+  
Sbjct: 2819 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAE 2878

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +  +G +Y +G   +G LG   
Sbjct: 2879 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLG--- 2935

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 2936 HGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 2995

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 2996 CKVPMKI 3002



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1865 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 1923

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 1924 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGM 1982

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2041

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G V+ WG    G  G
Sbjct: 2042 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQG 2099

Query: 358  HG 359
            +G
Sbjct: 2100 NG 2101



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 116/284 (40%), Gaps = 60/284 (21%)

Query: 114  QMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
            ++ + +G  H L +S+   ++S G +  G LGHG   + C     I       VV ++A 
Sbjct: 2852 KVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAG 2910

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---------------- 216
              H+A +  SG+++T G       GH D+   + +P+LVEAL+G                
Sbjct: 2911 GAHSACITASGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGHRVIDVACGSGDAQTL 2969

Query: 217  ----------------------------VPCK----------QVTAGLNFTGFLTIRGHV 238
                                        VP K          +V  G  F+  LT  G V
Sbjct: 2970 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3029

Query: 239  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            +T G   + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G   
Sbjct: 3030 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCCTEDGEVYTWGDND 3088

Query: 299  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
               LG G  +   +PR +   + K I+  RV+ G  H +A  +S
Sbjct: 3089 EGQLGDGTTNAIQRPRLVAALQGKKIN--RVACGSAHTLAWSTS 3130



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       VVQV+     
Sbjct: 1913 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVVQVACGSRD 1971

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1972 AQTLALTDEGMVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2030

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G V++
Sbjct: 2031 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTETGQVFA 2089

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2090 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2132



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 2753 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 2812

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 2813 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 2869

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             L+ +G+ E  +LGH     C  P  I
Sbjct: 2870 ELYSWGEAEDGKLGHGNRSPCDRPRVI 2896



 Score = 45.1 bits (105), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTAEGKVYACG 1826

Query: 402  WMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   +  PR + +L  + V +++  +G  H + +T  G++F +G+ 
Sbjct: 1827 EATNGRLGL---GLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 1883

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 1884 DDGKLGHFSRMNCDKPRLI 1902


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 152/329 (46%), Gaps = 21/329 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HAA V+++G+VFT G++S    GH  T     RPRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGH-GTREDCVRPRLVESLTVSNVDFVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T  G +++ G  TH  G LGHG+ +    PK ++   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTA 197

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 340
            +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 341 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     S+G ++TWG G    LGHGD+  +  P  +++L  H   +V      T  
Sbjct: 256 VTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVA 315

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  +G V   G   +G LG P    SD  +   + D +    V QI+ G YH  V+T R 
Sbjct: 316 LTTSGQVLSMGNAVYGQLGNPH---SDGRIPCLVEDKIVGEQVIQIACGSYHVAVLTGRN 372

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
            +F +G     +LGH  +     PT + +
Sbjct: 373 EVFTWGKGANGRLGHGDIEDRKVPTLVEV 401



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 120/275 (43%), Gaps = 22/275 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G +HT  ++ +  ++S G      G+LGHG +    +            V  VS   
Sbjct: 134 VACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGT 193

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H A +   GQ+FT GD S    GH D  + +  PR VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITSMGQLFTFGDGSFGVLGHGDL-KSVSYPREVESLSGLKTIAVACGVWHTAAIV 252

Query: 234 -------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G     +LGHGD   R  P  +A L +     ++A G S
Sbjct: 253 EVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID-HDFYRVACGHS 311

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             +A+T +G V S G   N   G  G  H + +   +   +  G  V++++ G  HV  L
Sbjct: 312 LTVALTTSGQVLSMG---NAVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACGSYHVAVL 368

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
                V+TWGKG  G LGHGD  D+ +P  +  LK
Sbjct: 369 TGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLK 403



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 129/276 (46%), Gaps = 20/276 (7%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           I  P+ +E+   +    V  G+     +   G V T G ++ G+LGHG   D   P+ + 
Sbjct: 65  ILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVE 124

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  V +V  +A G  +  AVT  G +YS+G G++    LGHG       P+ + +   +
Sbjct: 125 SL-TVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRV-SGALE 182

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS---- 375
           G+ V  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+    
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVA 242

Query: 376 ----HLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
               H A  V+V   +  + V +  G ++ +G      LG  D+   +  L+P  + +L 
Sbjct: 243 CGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDK---ETRLKPTCVATLI 299

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            H   +++ G   TV +T  G++   G+    QLG+
Sbjct: 300 DHDFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGN 335



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 109/229 (47%), Gaps = 23/229 (10%)

Query: 265 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           PLE   V  V  +  G  +   V  NG V+++G  S   LGHG + D ++PR +++    
Sbjct: 70  PLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVS 129

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
            +  V  + G+ H  A+ ++G +Y+WG G    G LGHG+++   +P+ +S     L V 
Sbjct: 130 NVDFV--ACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVA 187

Query: 381 -VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            V      T ++   G ++ FG   FG LG  D      V  PR ++SL       ++ G
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSVSYPREVESLSGLKTIAVACG 244

Query: 440 LYHTVVVTD-------------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           ++HT  + +              G+LF +GD ++ +LGH      L+PT
Sbjct: 245 VWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPT 293



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 145/343 (42%), Gaps = 26/343 (7%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           ++  L++ N  VF+ G    G LGHG     CV    +   + ++V  V+  E H   V 
Sbjct: 87  KHAALVMKNGEVFTWGEDSGGRLGHGTR-EDCVRPRLVESLTVSNVDFVACGEFHTCAVT 145

Query: 181 QSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
            +G++++ GD +      GH +        R+  AL+G+    V+ G   T  +T  G +
Sbjct: 146 TTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTALITSMGQL 205

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT------------ 286
            T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+             
Sbjct: 206 FTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIA-VACGVWHTAAIVEVIVTRSSSSVK 264

Query: 287 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
              G ++++G G    LGHG++   L+P  + T      +  RV+ G    VAL +SG V
Sbjct: 265 LSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHDFY--RVACGHSLTVALTTSGQV 322

Query: 346 YTWGKGYCGALG--HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            + G    G LG  H D     L E    +     +Q+        VL     V+ +G  
Sbjct: 323 LSMGNAVYGQLGNPHSDGRIPCLVE--DKIVGEQVIQIACGSYHVAVLTGRNEVFTWGKG 380

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
             G LG  D  + D+ + P +++ L+   V  I+ G   T  +
Sbjct: 381 ANGRLGHGD--IEDRKV-PTLVEVLKDRAVRYIACGANFTAAI 420



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 15/228 (6%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 163
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHT 248

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V  + + ++  L +G++FT GD      GH D    + +P  V  L      +V 
Sbjct: 249 AAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRL-KPTCVATLIDHDFYRVA 307

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V + G+  +GQLG+  + D   P  +        V+QIA G  ++ 
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNPHS-DGRIPCLVEDKIVGEQVIQIACGSYHVA 366

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +  +   A
Sbjct: 367 VLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACGA 414



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 4/186 (2%)

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           S  +GS+  +    + D L P+ +++     + V  V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVISSTGRTDILLPKPLES--NLVLDVYHVDCGVKHAALVMKNGEVFTWGEDS 105

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHG   D   P  + SL       V   +  T  +  TG +Y +G  G  ++G   
Sbjct: 106 GGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYSWG-DGTHNVGLLG 164

Query: 413 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
            G       P R+  +L    V+ +S G +HT ++T  G+LF FGD     LGH  L+  
Sbjct: 165 HGNDVGHWIPKRVSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSV 224

Query: 472 LEPTEI 477
             P E+
Sbjct: 225 SYPREV 230



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 24/141 (17%)

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGA---------LGHGDEIDKTLPEPLSSLKSHLAVQ 380
           SA DE     DS G VY WG+  C           +      D  LP+P   L+S+L + 
Sbjct: 26  SAQDE----CDSLGDVYVWGEVVCDTSVRTGSDTVISSTGRTDILLPKP---LESNLVLD 78

Query: 381 V----CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
           V    C  K    V+ + G V+ +G    G LG    G  +  +RPR+++SL   +V  +
Sbjct: 79  VYHVDCGVKHAALVMKN-GEVFTWGEDSGGRLGH---GTREDCVRPRLVESLTVSNVDFV 134

Query: 437 STGLYHTVVVTDRGRLFGFGD 457
           + G +HT  VT  G L+ +GD
Sbjct: 135 ACGEFHTCAVTTTGELYSWGD 155


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 24/362 (6%)

Query: 126 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + S   ++  GS+  G LG G  E  Q ++ ++I +     V QV+    H  F+  +G+
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGK 60

Query: 185 VFTCGDNSSFCCGHR-DTNRPIFRP-RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           V+ CG N     GH   T RP   P  L+  L+     Q+  G   +  L+  G V + G
Sbjct: 61  VYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 120

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEV------GSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            N  GQLGH       T K I  L +V       +VVQIA G ++ LA+T  G +YS+GS
Sbjct: 121 DNDCGQLGHA------TDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGS 174

Query: 297 GSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
                LG    +D      P  + T    GI +  ++ G  H   +  SG V+ WG+  C
Sbjct: 175 NIYGQLGVNSPNDLTHCNYPLRLTTLL--GIPLAAIACGGNHSFLISKSGAVFGWGRNNC 232

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG  DE +++ P  L +L++     V      +  L + G V+  G   +G LG    
Sbjct: 233 GQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---H 289

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           G S   + PR++  L    ++Q++ G  HT+ +V  RGR++ FG     QLG  + +  +
Sbjct: 290 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLM 349

Query: 473 EP 474
            P
Sbjct: 350 LP 351



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 140/315 (44%), Gaps = 14/315 (4%)

Query: 104 SDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 162
           S I  T      Q+  G  HTL ++ +  V++CGS+    LGH   T +      +  P 
Sbjct: 32  SQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPE 91

Query: 163 AAH--VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                ++Q+     H+  +   GQV + GDN     GH      +  P++V  L      
Sbjct: 92  LQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVV 151

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAA 277
           Q+  G N +  LT  G +++ GSN +GQLG     D      P  +  L  +  +  IA 
Sbjct: 152 QIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGI-PLAAIAC 210

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
           G ++   ++ +G V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE 
Sbjct: 211 GGNHSFLISKSGAV--FGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRF--VACGDEF 266

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT- 394
            V L + G V+T G G  G LGHG   ++ LP  +  L      QV    R T  LV + 
Sbjct: 267 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSR 326

Query: 395 GSVYGFGWMGFGSLG 409
           G VY FG    G LG
Sbjct: 327 GRVYAFGLGSSGQLG 341



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 17/263 (6%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 171
           +QI  G  H+L +S+   V S G + CG LGH    E  Q     R        VVQ++ 
Sbjct: 98  IQICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKT--VVQIAC 155

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-----IFRPRLVEALKGVPCKQVTAGL 226
             NH+  +   G++++ G N     G    N P        P  +  L G+P   +  G 
Sbjct: 156 GNNHSLALTSCGELYSWGSN---IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGG 212

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           N +  ++  G V   G N  GQLG  D  +R  P  +  L  +G V  +A G  + + +T
Sbjct: 213 NHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLG-VRFVACGDEFSVFLT 271

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYV 345
             G V++ G+G+   LGHG   +E+ PR +      G  + +V+ G+ H +AL  S G V
Sbjct: 272 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELM--GSTITQVACGNRHTLALVPSRGRV 329

Query: 346 YTWGKGYCGALGHGDEIDKTLPE 368
           Y +G G  G LG        LP+
Sbjct: 330 YAFGLGSSGQLGTRSTKSLMLPQ 352



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 7/246 (2%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            ++  GS +HGQLG G   D    TP  I P     +V Q+A G  + L +T  G VY+ 
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQI-PWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 295 GSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           GS     LGH    +   + P  +    +  + ++++  G  H +AL   G V +WG   
Sbjct: 65  GSNDYSQLGHDLPTKRPRMSPFLLIPELQDYV-IIQICCGSRHSLALSDWGQVLSWGDND 123

Query: 353 CGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
           CG LGH  D+    LP+ +  L +   VQ+      +  L   G +Y +G   +G LG  
Sbjct: 124 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVN 183

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
                     P  L +L    ++ I+ G  H+ +++  G +FG+G N   QLG +     
Sbjct: 184 SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNR 243

Query: 472 LEPTEI 477
             PT++
Sbjct: 244 SYPTQL 249



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLG-HGP-ETTQCVSFTRINFPSAAHVVQVSA 171
           +QI  G  H+L L S   ++S GS++ G LG + P + T C    R+       +  ++ 
Sbjct: 151 VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIAC 210

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
             NH+  + +SG VF  G N+    G  D TNR    P  ++ L+ +  + V  G  F+ 
Sbjct: 211 GGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSY--PTQLKTLRTLGVRFVACGDEFSV 268

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGN 288
           FLT  G V TCG+  +GQLGHG + +   P+ +  +E +GS + Q+A G  + LA V   
Sbjct: 269 FLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMV--MELMGSTITQVACGNRHTLALVPSR 326

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAI 316
           G VY+FG GS+  LG       + P+ +
Sbjct: 327 GRVYAFGLGSSGQLGTRSTKSLMLPQVV 354



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 6/91 (6%)

Query: 397 VYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           +Y +G    G LG    G+ D ++L P  +       V Q++ G  HT+ +T  G+++  
Sbjct: 7   LYCWGSTSHGQLGL--GGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYAC 64

Query: 456 GDNERAQLGHD--TLRGCLEPTEIFIQEMEE 484
           G N+ +QLGHD  T R  + P  + I E+++
Sbjct: 65  GSNDYSQLGHDLPTKRPRMSPF-LLIPELQD 94


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 22/325 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G+VF+ G+      GH   +     P+L++AL  +  + V  G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGH-GGDSDAHHPKLIDALSNLNIELVACG 368

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G  T+  G LGHG  +    PK +  PL+ +  +  I+ GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL-HISSISCGPWHT 427

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                    +SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVA 545

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L ++G +Y  G   +G LG P    +D  L  R+   L    V +++ G YH  V+T R 
Sbjct: 546 LTNSGHIYTMGSPVYGQLGNPQ---ADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRT 602

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPT 475
            ++ +G     +LGH +      PT
Sbjct: 603 EVYTWGKGANGRLGHGSTDDRNTPT 627



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+  P    H+  +S  
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVP-KRVTGPLQGLHISSISCG 423

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +G++FT GD +    GH D +  I  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTALVTSAGKLFTFGDGTFGVLGHGDRD-SISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHS 541

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G +Y+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKS--FVEELACGAYHVAVLT 599

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHG   D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALK 633



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 25/295 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E++  +  + +  G      +T +G V + G    G+LGHG   D   PK I  L 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIH 325
            + ++  +A G  +  AVT +G +Y++G G+  +  LGHG+      P+ + T   +G+H
Sbjct: 359 NL-NIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLH 416

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           +  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 417 ISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGV 476

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 477 WHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDK---EARLVPTCVAALVEPNF 533

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP------TEIFIQEM 482
            Q++ G   TV +T+ G ++  G     QLG+    G L        ++ F++E+
Sbjct: 534 CQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEEL 588



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 147/349 (42%), Gaps = 26/349 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
             I  G  H  L++    VFS G    G LGHG + +       I+  S  ++  V+  E
Sbjct: 311 QNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLNIELVACGE 369

Query: 174 NHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            H   V  SG ++T GD   NS      +D +  + + R+   L+G+    ++ G   T 
Sbjct: 370 YHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPK-RVTGPLQGLHISSISCGPWHTA 428

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 286
            +T  G + T G  T G LGHGD      P+ +  L+ +   V+ A G  +  AV     
Sbjct: 429 LVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGL-RTVRAACGVWHTAAVVEVII 487

Query: 287 --------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
                    +G ++++G G    LGHG++   L P  +        +  +V+ G    VA
Sbjct: 488 GNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP--NFCQVACGHSLTVA 545

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSV 397
           L +SG++YT G    G LG+  + D  LP  +   L      ++        VL     V
Sbjct: 546 LTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEV 604

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           Y +G    G LG    G +D    P ++++L+   V  I+ G   T  +
Sbjct: 605 YTWGKGANGRLG---HGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L P+A+++     + V  ++ G+ H   +   G V++WG+ Y G LGHG + D   P+
Sbjct: 295 DSLLPKALESVVV--LDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 369 PLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            + +L S+L +++ A  +  T  +  +G +Y  G G    G LG   + VS  V + R+ 
Sbjct: 353 LIDAL-SNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-GKDVSHWVPK-RVT 409

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             L+  H+S IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 410 GPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREV 461



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 13/195 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G  ++   S+  +F+ G    G LGHG +  +
Sbjct: 468 RTVRAACGVWHTAAVVE--------VIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEAR 519

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T +      +  QV+   +    +  SG ++T G       G+   +  +  P  V
Sbjct: 520 LVP-TCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKL--PARV 576

Query: 212 EA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           E  L     +++  G      LT R  V+T G   +G+LGHG T DR TP  +  L++  
Sbjct: 577 EGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKD-K 635

Query: 271 SVVQIAAGPSYMLAV 285
            V  IA G ++  A+
Sbjct: 636 QVKSIACGTNFTAAI 650



 Score = 42.0 bits (97), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           +ID  LP+ L S+       +    R   ++   G V+ +G    G LG    G      
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLG---HGGDSDAH 349

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
            P+++D+L   ++  ++ G YHT  VT  G L+ +GD
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGD 386



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 3/127 (2%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N  Q+  G   T+ ++NS  +++ GS + G LG+ P+    +        S + V +++ 
Sbjct: 532 NFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELAC 590

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H A +    +V+T G  ++   GH  T+     P LVEALK    K +  G NFT  
Sbjct: 591 GAYHVAVLTSRTEVYTWGKGANGRLGHGSTD-DRNTPTLVEALKDKQVKSIACGTNFTAA 649

Query: 232 LTIRGHV 238
           + +   V
Sbjct: 650 ICLHKWV 656


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 134/245 (54%), Gaps = 8/245 (3%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++ CG  T+G+LG G   + PTP+ +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 2944 GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSW 3003

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G +  LGHG +    +P+ I++ R K   V  ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3004 GEGEDGKLGHGNRLTLEKPKLIESLRTK--RVRDIACGSSHSAAITSSGELYTWGLGEYG 3061

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             LGHGD   +  P+ +++L+ H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3062 RLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG--- 3118

Query: 413  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            RG S+    P  ++ L +  V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3119 RGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVR 3178

Query: 473  EPTEI 477
            +PT I
Sbjct: 3179 KPTPI 3183



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 155/329 (47%), Gaps = 17/329 (5%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +RI  P+          +Q++  E     V   G+++  G  +    G   T+  +  P 
Sbjct: 3956 SRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDS-VSAPT 4014

Query: 210  LVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAP 265
            LVE+L+ V  K+V   +G      L+  G V + G    G+LGHG  D+ DRP  K I  
Sbjct: 4015 LVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRP--KLIEA 4072

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +G V+ IA G ++   +T  G V ++G G    LGHG+  D+LQP+ ++        
Sbjct: 4073 LSGIG-VIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAI 4131

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + +     V++WG G  G LG G      +P  + SL     ++V    
Sbjct: 4132 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGS 4191

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +GSVY +G   +  LG    G +D V RP+ + +L+   +  I+TG  H V 
Sbjct: 4192 QFSVALTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKVAALQGKKIISIATGSLHCVA 4248

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             +D G +F +GDN+  QLG  T+     P
Sbjct: 4249 CSDSGEVFTWGDNDEGQLGDGTVTAIQRP 4277



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 151/321 (47%), Gaps = 21/321 (6%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 207
            +++  P+ + V      + ++        V Q G+++ CG+  N     GH   N  +  
Sbjct: 2911 SKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 2967

Query: 208  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            PR V  L     K+V   +G      LT+ G V + G    G+LGHG+ L    PK I  
Sbjct: 2968 PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIES 3027

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L     V  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ + T   +G  
Sbjct: 3028 LR-TKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTL--QGHR 3084

Query: 326  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
            VV+V+ G  D   + L   G V++WG G  G LG G     ++P  +  L S   +Q+  
Sbjct: 3085 VVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIEC 3144

Query: 384  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
              + +  L  +G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H 
Sbjct: 3145 GAQFSLALTKSGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHC 3201

Query: 444  VVVTDRGRLFGFGDNERAQLG 464
            + VTD G+++ +GDN+  Q G
Sbjct: 3202 LAVTDSGQVYAWGDNDHGQQG 3222



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 141/283 (49%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+VF+ G+      GH   NR  + RP+L+EAL G+    +  G
Sbjct: 4027 VAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH--GNRDSYDRPKLIEALSGIGVIDIACG 4084

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T +GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4085 SAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLC 4144

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4145 ITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESL--AGLGVIKVECGSQFSVALTRSGS 4202

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG+      P+ +++L+    + +           D+G V+ +G   
Sbjct: 4203 VYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDND 4262

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ SL+  H+ ++  G  HT+ ++
Sbjct: 4263 EGQLG---DGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4302



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 157/339 (46%), Gaps = 25/339 (7%)

Query: 134 SCGSSLCGVLGHGPE-TTQCV------SFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
           SC   + G +      TTQ +      S   I  PS   V QV+ +EN+   +   GQVF
Sbjct: 486 SCSPEMYGFMSEATNGTTQLMGSIPRYSAATIELPSTLQVRQVACTENNIYILTTGGQVF 545

Query: 187 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL--NFTGFLTIRGHVHTCGSN 244
           +   NSS              P+  E L+GV   Q+ A         L+    V + G+ 
Sbjct: 546 SLHSNSS----------ENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAG 595

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
             G+LGHGDT+ +  P  I  L E   V  I  G SY  A+T  G ++++G G+   LGH
Sbjct: 596 DGGRLGHGDTVSKEHPTMIVGLHE-KQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGH 654

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   D+L P  +Q  +   +  V + +GD H + +  +G ++ WG G  G LG+G     
Sbjct: 655 GNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGS 714

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
            +P  + +L +    ++ +  + +  L   G++Y +G    G LG    G S+    P++
Sbjct: 715 PIPVQIDTLVN--VSRIYSGSQFSVALSCDGTLYTWGKGHGGRLG---HGNSEHSNVPKL 769

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
           + +L    ++ ++ G  H + +T  G L+G+G N+  Q+
Sbjct: 770 VRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQI 808



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 156/344 (45%), Gaps = 31/344 (9%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 166
            + I  G     ++S +  +++CG    G LG G            N P+   V       
Sbjct: 2928 IHIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNN---------NVPTPRQVPILNQYV 2978

Query: 167  ---VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQV 222
               V V +   HA  +   G+VF+ G+      GH   NR  + +P+L+E+L+    + +
Sbjct: 2979 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRLTLEKPKLIESLRTKRVRDI 3036

Query: 223  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--S 280
              G + +  +T  G ++T G   +G+LGHGD   +  PK +  L+    VVQ+A G   +
Sbjct: 3037 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQG-HRVVQVACGSRDA 3095

Query: 281  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
              L +T  G+V+S+G G    LG G       P  ++  R   + V+++  G +  +AL 
Sbjct: 3096 QTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVE--RLNSVGVMQIECGAQFSLALT 3153

Query: 341  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             SG V+TWGKG    LGHG +     P P+  L+    + V         + D+G VY +
Sbjct: 3154 KSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAW 3213

Query: 401  GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
            G    G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3214 GDNDHGQQGSGNTVVNKK---PNLVLGLDGVFVNRVACGSSHSV 3254



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 234  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            I   V   G N   QLG   G  +  PT  S+  L ++  +  IA G   +  V+ +G +
Sbjct: 2890 ISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HIAGGSKSLFIVSQDGKL 2946

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            Y+ G G+N  LG G  ++   PR +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 2947 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3006

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
              G LGHG+ +    P+ + SL++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3007 EDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3066

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
            D       L+P+++ +L+ H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3067 DNCTQ---LKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSE 3123

Query: 470  GCLEPTEI 477
            GC  P ++
Sbjct: 3124 GCSVPHQV 3131



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 127/285 (44%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L S+  VFS G    G LGHG       S+ R   I   S   V+ 
Sbjct: 4025 KKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIEALSGIGVID 4080

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +   G V T G       GH D+   + +P+LVEAL G     +  G   
Sbjct: 4081 IACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL-QPKLVEALLGYRAIDIACGSGD 4139

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T
Sbjct: 4140 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VIKVECGSQFSVALT 4198

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG V+
Sbjct: 4199 RSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVF 4256

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  + SL+    V+V      T  L
Sbjct: 4257 TWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4301



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 12/241 (4%)

Query: 242  GSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            G N  GQLG   G  +  PTP ++++ L  +    QIA G   + AVT +G +Y+ G G+
Sbjct: 3943 GHNHRGQLGGLDGSRIKMPTPCEALSLLRPI----QIAGGEQTLYAVTPDGKLYATGYGA 3998

Query: 299  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
               LG G       P  +++ +   I  V V++G +H +AL S G V++WG+G  G LGH
Sbjct: 3999 GGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4058

Query: 359  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
            G+      P+ + +L     + +      +  +   G V  +G   +G LG  D   S+ 
Sbjct: 4059 GNRDSYDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD---SED 4115

Query: 419  VLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
             L+P+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +
Sbjct: 4116 QLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMK 4175

Query: 477  I 477
            I
Sbjct: 4176 I 4176



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 15/222 (6%)

Query: 260 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           P+  A   E+ S +Q+       +A T N +      G  F L H    + + P+A +  
Sbjct: 510 PRYSAATIELPSTLQV-----RQVACTENNIYILTTGGQVFSL-HSNSSENIAPKAFEGL 563

Query: 320 RRKGIHVVRVSAGDE--HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 377
             +G+HVV+++A  E  HV+ L S+  V++WG G  G LGHGD + K  P  +  L    
Sbjct: 564 --EGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQ 621

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 437
              +      +  +   G ++ +G   +G LG    G SD  L P  + +L+++ V  ++
Sbjct: 622 VCGIYCGASYSAAITIAGELFTWGRGTYGRLG---HGNSDDKLVPTQVQALKSYKVVDVA 678

Query: 438 --TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H++ VTD G LF +GD +  +LG+ +  G   P +I
Sbjct: 679 LGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQI 720


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
           SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 26  SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 83

Query: 220 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 84  KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 142

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 143 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 200

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 201 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 260

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 261 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 317

Query: 456 GDNERAQLGHDTLRGCLEPTEIFIQEME 483
           GDN+  Q G+ T     +PT   +Q +E
Sbjct: 318 GDNDHGQQGNGTTTVNRKPT--LVQGLE 343



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 132/262 (50%), Gaps = 9/262 (3%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 266
           P   E L  +   QV  G      +T+ G V++CG  T+G+LG G  +   P P+ I  L
Sbjct: 19  PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITAL 78

Query: 267 EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
              V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 79  SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 138

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 383
              ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +
Sbjct: 139 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS 196

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
           R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   +
Sbjct: 197 RDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFS 253

Query: 444 VVVTDRGRLFGFGDNERAQLGH 465
           + +T  G ++ +G  +  +LGH
Sbjct: 254 LALTKSGVVWTWGKGDYFRLGH 275



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 1079 VAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 1137

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 1138 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 1196

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 1197 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1254

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 1255 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1314

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 1315 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 1351



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 1065 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIES 1124

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 1125 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 1183

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 1184 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 1243

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 1244 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1300

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 1301 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 1329



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 1077 KKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 1135

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 1136 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 1194

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 1195 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 1253

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 1254 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 1311

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 1312 DNDEGQLGDG 1321



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 989  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 1044

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 1045 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAK 1104

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 1105 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 1164

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 1165 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 1221

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 1222 CKVPMKI 1228



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 92  GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 150

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 237
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 151 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 209

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 210 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 268

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 269 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 326

Query: 358 HG 359
           +G
Sbjct: 327 NG 328



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 140 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 198

Query: 176 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 199 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 257

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 258 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 316

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
           +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 317 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 359



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 1189 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1247

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1248 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1306

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1307 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1352



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 979  DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 1038

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 1039 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1095

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ +  +LGH     C  P  I
Sbjct: 1096 EVYSWGEAKDGKLGHGNRSPCDRPRVI 1122



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 9/113 (7%)

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILD 426
           E LS+L     VQV    +  F +   G VY  G    G LG    G+S   V  PR + 
Sbjct: 23  ETLSALN---VVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGL---GMSSGTVPIPRQIT 76

Query: 427 SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +L ++ V +++  +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 77  ALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 129


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 157/325 (48%), Gaps = 22/325 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G+VF+ G+      GH   +     P+L++AL  +  + V  G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGH-GGDSDAHHPKLIDALSNLNIELVACG 368

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G  T+  G LGHG  +    PK +  PL+ +  +  I+ GP + 
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL-HISSISCGPWHT 427

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT  G +++FG G+   LGHG++     PR +++   KG+  VR + G  H  A+   
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESL--KGLRTVRAACGVWHTAAVVEV 485

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                    +SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 486 IIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVA 545

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L ++G +Y  G   +G LG P    +D  L  R+   L    V +++ G YH  V+T R 
Sbjct: 546 LTNSGHIYTMGSPVYGQLGNPQ---ADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRT 602

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPT 475
            ++ +G     +LGH +      PT
Sbjct: 603 EVYTWGKGANGRLGHGSTDDRNTPT 627



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG + +  V   R+  P    H+  +S  
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVP-KRVTGPLQGLHISSISCG 423

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +G++FT GD +    GH D +  I  PR VE+LKG+   +   G+  T  +
Sbjct: 424 PWHTALVTSAGKLFTFGDGTFGVLGHGDRD-SISIPREVESLKGLRTVRAACGVWHTAAV 482

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 483 VEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP-NFCQVACGHS 541

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G +Y+ GS     LG+ +   +L  R      +    V  ++ G  HV  L 
Sbjct: 542 LTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKS--FVEELACGAYHVAVLT 599

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHG   D+  P  + +LK
Sbjct: 600 SRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALK 633



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 25/295 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E++  +  + +  G      +T +G V + G    G+LGHG   D   PK I  L 
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIH 325
            + ++  +A G  +  AVT +G +Y++G G+  +  LGHG+      P+ + T   +G+H
Sbjct: 359 NL-NIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLH 416

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           +  +S G  H   + S+G ++T+G G  G LGHGD    ++P  + SLK    V+     
Sbjct: 417 ISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGV 476

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 477 WHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDK---EARLVPTCVAALVEPNF 533

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP------TEIFIQEM 482
            Q++ G   TV +T+ G ++  G     QLG+    G L        ++ F++E+
Sbjct: 534 CQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEEL 588



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 147/349 (42%), Gaps = 26/349 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
             I  G  H  L++    VFS G    G LGHG + +       I+  S  ++  V+  E
Sbjct: 311 QNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLNIELVACGE 369

Query: 174 NHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            H   V  SG ++T GD   NS      +D +  + + R+   L+G+    ++ G   T 
Sbjct: 370 YHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPK-RVTGPLQGLHISSISCGPWHTA 428

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 286
            +T  G + T G  T G LGHGD      P+ +  L+ +   V+ A G  +  AV     
Sbjct: 429 LVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGL-RTVRAACGVWHTAAVVEVII 487

Query: 287 --------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
                    +G ++++G G    LGHG++   L P  +        +  +V+ G    VA
Sbjct: 488 GNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP--NFCQVACGHSLTVA 545

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSV 397
           L +SG++YT G    G LG+  + D  LP  +   L      ++        VL     V
Sbjct: 546 LTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEV 604

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           Y +G    G LG    G +D    P ++++L+   V  I+ G   T  +
Sbjct: 605 YTWGKGANGRLG---HGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 8/172 (4%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L P+A+++     + V  ++ G+ H   +   G V++WG+ Y G LGHG + D   P+
Sbjct: 295 DSLLPKALESVVV--LDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 369 PLSSLKSHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            + +L S+L +++ A  +  T  +  +G +Y  G G    G LG   + VS  V + R+ 
Sbjct: 353 LIDAL-SNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGH-GKDVSHWVPK-RVT 409

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             L+  H+S IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 410 GPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREV 461



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 13/195 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G  ++   S+  +F+ G    G LGHG +  +
Sbjct: 468 RTVRAACGVWHTAAVVE--------VIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEAR 519

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T +      +  QV+   +    +  SG ++T G       G+   +  +  P  V
Sbjct: 520 LVP-TCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKL--PARV 576

Query: 212 EA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           E  L     +++  G      LT R  V+T G   +G+LGHG T DR TP  +  L++  
Sbjct: 577 EGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKD-K 635

Query: 271 SVVQIAAGPSYMLAV 285
            V  IA G ++  A+
Sbjct: 636 QVKSIACGTNFTAAI 650



 Score = 42.0 bits (97), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           +ID  LP+ L S+       +    R   ++   G V+ +G    G LG    G      
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLG---HGGDSDAH 349

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
            P+++D+L   ++  ++ G YHT  VT  G L+ +GD
Sbjct: 350 HPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGD 386



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 3/127 (2%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N  Q+  G   T+ ++NS  +++ GS + G LG+ P+    +        S + V +++ 
Sbjct: 532 NFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGN-PQADGKLPARVEGKLSKSFVEELAC 590

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H A +    +V+T G  ++   GH  T+     P LVEALK    K +  G NFT  
Sbjct: 591 GAYHVAVLTSRTEVYTWGKGANGRLGHGSTD-DRNTPTLVEALKDKQVKSIACGTNFTAA 649

Query: 232 LTIRGHV 238
           + +   V
Sbjct: 650 ICLHKWV 656


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 157/333 (47%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 255 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSA 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSL--TD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVC 382
           I +V+++ G  H +AL     V++WG+   G LG G E+  ++ P+ + SL     +QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N HGQLG G  L  +  P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 7/273 (2%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 156
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIKVP 128

Query: 157 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL 188

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 336 VVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             A + SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI  G YH+L +S  S VFS G +  G LG G E     +   I        +QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 291
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ 317
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 6/217 (2%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + +  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKSQSAPQLIKS 186

Query: 110 SAGNQ-MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 167
             G   MQ+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 228 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 157/333 (47%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 255 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIKVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSA 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSL--TD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVC 382
           I +V+++ G  H +AL     V++WG+   G LG G E+  ++ P+ + SL     +QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N HGQLG G  L  +  P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 7/273 (2%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 156
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIKVP 128

Query: 157 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL 188

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 336 VVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             A + SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI  G YH+L +S  S VFS G +  G LG G E     +   I        +QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 291
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ 317
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 6/217 (2%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + +  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKSQSAPQLIKS 186

Query: 110 SAGNQ-MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 167
             G   MQ+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 228 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 152/315 (48%), Gaps = 21/315 (6%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           HAA V + G+VFT G+ S    GH    + + +PR+VE+L       V  G   T  +TI
Sbjct: 292 HAALVTRQGEVFTWGEESGGRLGH-GVVKDVIQPRMVESLAASSIGFVACGEFHTCAVTI 350

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G ++T G  TH  G LGHG  +    PK ++ PLE +  V  +  GP +   VT  G +
Sbjct: 351 TGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGL-QVTSVTCGPWHTALVTSMGQL 409

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 340
           ++FG G+   LGHG++ +   P+ +++    G+  + V+ G  H  A+            
Sbjct: 410 FTFGDGTFGALGHGDRENISYPKEVESL--SGLRTIAVACGVWHTAAVVEVIVTQSSSSI 467

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           SSG ++TWG G    LGHGD+  +  P  + +L  +   +V      T  L  +G V+  
Sbjct: 468 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSM 527

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   +G LG P    +D  +   + D L    V ++S G YH VV+T +  ++ +G    
Sbjct: 528 GSTVYGQLGNPS---ADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGAN 584

Query: 461 AQLGHDTLRGCLEPT 475
            +LGH  +     PT
Sbjct: 585 GRLGHGDVEDRKTPT 599



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 134/294 (45%), Gaps = 22/294 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ A + +  +  G +HT  ++ +     +  G+   G+LGHG + +  +   R++ P
Sbjct: 326 MVESLAASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIP-KRVSGP 384

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V  V+    H A V   GQ+FT GD +    GH D    I  P+ VE+L G+   
Sbjct: 385 LEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDREN-ISYPKEVESLSGLRTI 443

Query: 221 QVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V  G+  T  +              G + T G     +LGHGD   R  P  +  L + 
Sbjct: 444 AVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY 503

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
               ++A G S  + +T +G V+S GS     LG+     ++ P  ++  +  G  V  V
Sbjct: 504 -DFHKVACGHSITVGLTTSGQVFSMGSTVYGQLGNPSADGKI-PCLVED-KLFGESVEEV 560

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
           S G  HVV L S   VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 561 SCGAYHVVVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIAC 614



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 142/310 (45%), Gaps = 25/310 (8%)

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           NSS+     D    +  PR +E+   +    +  G+     +T +G V T G  + G+LG
Sbjct: 259 NSSYVTLRTD----VLLPRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLG 314

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 308
           HG   D   P+ +  L    S+  +A G  +  AVT  G +Y++G G++    LGHG   
Sbjct: 315 HGVVKDVIQPRMVESL-AASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDV 373

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
               P+ + +   +G+ V  V+ G  H   + S G ++T+G G  GALGHGD  + + P+
Sbjct: 374 SHWIPKRV-SGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPK 432

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSD 417
            + SL     + V      T  +V+            G ++ +G      LG  D+   +
Sbjct: 433 EVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDK---E 489

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEP 474
             L+P  + +L  +   +++ G   TV +T  G++F  G     QLG+ +  G   CL  
Sbjct: 490 PRLKPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGSTVYGQLGNPSADGKIPCLVE 549

Query: 475 TEIFIQEMEE 484
            ++F + +EE
Sbjct: 550 DKLFGESVEE 559



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 143/346 (41%), Gaps = 34/346 (9%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 173
           R+  L+     VF+ G    G LGHG       P   + ++ + I F        V+  E
Sbjct: 291 RHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLAASSIGF--------VACGE 342

Query: 174 NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H   V  +G+++T GD  +++   GH          R+   L+G+    VT G   T  
Sbjct: 343 FHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHTAL 402

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 286
           +T  G + T G  T G LGHGD  +   PK +  L  + ++  +A G  +  AV      
Sbjct: 403 VTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTIA-VACGVWHTAAVVEVIVT 461

Query: 287 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
                  +G ++++G G    LGHG++   L+P  +        H  +V+ G    V L 
Sbjct: 462 QSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFH--KVACGHSITVGLT 519

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           +SG V++ G    G LG+     K        L      +V        VL     VY +
Sbjct: 520 TSGQVFSMGSTVYGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTW 579

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           G    G LG  D  V D+   P ++++L+  HV  I+ G  +T  +
Sbjct: 580 GKGANGRLGHGD--VEDRKT-PTLVEALKDRHVKYIACGSNYTAAI 622


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 224
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 354

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 355 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 414

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 339
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 415 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 472

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SSG ++TWG G  G LGHG++  K +P  +++L      QV      T  L 
Sbjct: 473 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 532

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G VY  G   +G LG      +D     R+   L    V +I+ G YH  V+T R  +
Sbjct: 533 TSGHVYTMGSPVYGQLG---NSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 589

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH  +     PT
Sbjct: 590 YTWGKGSNGRLGHGDVDDRNSPT 612



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 174
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 352 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 410

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 233
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 411 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 469

Query: 234 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 470 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 528

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+T +G VY+ GS     LG+    D   P  ++    K   V  ++ G  HV  L S 
Sbjct: 529 VALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSF-VEEIACGAYHVAVLTSR 586

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 587 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLK 618



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 17/270 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 345

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 346 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 403

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK    V+       
Sbjct: 404 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWH 463

Query: 388 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
           T  +V+             G ++ +G    G LG    G  +  L P  + +L   +  Q
Sbjct: 464 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLG---HGNKEPKLVPTCVAALVEPNFCQ 520

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           ++ G   TV +T  G ++  G     QLG+
Sbjct: 521 VACGHSLTVALTTSGHVYTMGSPVYGQLGN 550



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 112/248 (45%), Gaps = 22/248 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 405 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 463

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH +   P   P  V AL      QV 
Sbjct: 464 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 522

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  GHV+T GS  +GQLG+    D  TP  +        V +IA G  ++ 
Sbjct: 523 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVA 581

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +T    VY++G GSN  LGHG+  D   P  +++ + K   V  ++ G     A+    
Sbjct: 582 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDK--QVKSIACGTNFTAAV---- 635

Query: 344 YVYTWGKG 351
            ++ W  G
Sbjct: 636 CIHRWASG 643



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           GS+F +    + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G L
Sbjct: 274 GSSFDI----KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRL 327

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           GHG + +   P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS
Sbjct: 328 GHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNE-VS 386

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
             V + R+   L   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E
Sbjct: 387 HWVPK-RVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE 445

Query: 477 I 477
           +
Sbjct: 446 V 446


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 148/315 (46%), Gaps = 21/315 (6%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           HAA V + G++FT G+ S    GH    R + +PRLVE+L       V  G   T  +T+
Sbjct: 291 HAALVTRQGEIFTWGEESGGRLGH-GVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTM 349

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G + T G  TH  G LGHG  +    PK I+ PLE +  V  +  GP +   VT    +
Sbjct: 350 AGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGL-QVASVTCGPWHTALVTTTRQL 408

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD----------- 340
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGDKDNVAYPREVESL--SGLRTIAVACGVWHTAAVVEVIVTQSSASV 466

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           SSG ++TWG G    LGHGD+  +  P  + +L  +   +V      T  L  +G V   
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTM 526

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   +G LG P    SD  L   + D L    V +I+ G YH  V+T R  ++ +G    
Sbjct: 527 GSTVYGQLGNPQ---SDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 461 AQLGHDTLRGCLEPT 475
            +LGH  +     PT
Sbjct: 584 GRLGHGDIEDRKTPT 598



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 128/282 (45%), Gaps = 21/282 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G +HT  ++ +  +F+ G      G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 VACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIP-KRISGPLEGLQVASVTCG 395

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  + Q+FT GD +    GH D +   + PR VE+L G+    V  G+  T  +
Sbjct: 396 PWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAY-PREVESLSGLRTIAVACGVWHTAAV 454

Query: 233 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                         G + T G     +LGHGD   R  P  +  L E  +  ++A G S 
Sbjct: 455 VEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEY-NFQKVACGHSL 513

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +T +G V + GS     LG+  Q D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGQVCTMGSTVYGQLGN-PQSDGKLPCFVED-KLLGECVEEIACGAYHVAVLTS 571

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 572 RNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIAC 613



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 21/227 (9%)

Query: 265 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           PLE   V  V  IA G  +   VT  G ++++G  S   LGHG   D +QPR +++    
Sbjct: 273 PLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFT 332

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAV- 379
            +    V+ G+ H  A+  +G ++TWG G    G LGHG ++   +P+ +S     L V 
Sbjct: 333 SVDF--VACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVA 390

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            V      T ++  T  ++ FG   FG LG  D+   D V  PR ++SL       ++ G
Sbjct: 391 SVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDK---DNVAYPREVESLSGLRTIAVACG 447

Query: 440 LYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           ++HT  V +            G+LF +GD ++ +LGH      L+PT
Sbjct: 448 VWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 494



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 18/285 (6%)

Query: 201 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           T   +  P+ +E+   +    +  G+     +T +G + T G  + G+LGHG   D   P
Sbjct: 264 TRADLLLPKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQP 323

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 318
           + +  L    SV  +A G  +  AVT  G ++++G G++    LGHG       P+ I +
Sbjct: 324 RLVESL-AFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRI-S 381

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS 375
              +G+ V  V+ G  H   + ++  ++T+G G  G LGHGD+ +   P   E LS L++
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRT 441

Query: 376 --------HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
                   H A  V     ++   V +G ++ +G      LG  D+   +  L+P  + +
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPA 498

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           L  ++  +++ G   TV +T  G++   G     QLG+    G L
Sbjct: 499 LIEYNFQKVACGHSLTVGLTTSGQVCTMGSTVYGQLGNPQSDGKL 543



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 4/170 (2%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L P+ +++     +H   ++ G  H   +   G ++TWG+   G LGHG   D   P 
Sbjct: 267 DLLLPKPLESNVVLDVH--HIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPR 324

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 427
            + SL       V   +  T  +   G ++ +G  G  + G    G       P RI   
Sbjct: 325 LVESLAFTSVDFVACGEFHTCAVTMAGELFTWG-DGTHNAGLLGHGTDVSHWIPKRISGP 383

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           L    V+ ++ G +HT +VT   +LF FGD     LGH        P E+
Sbjct: 384 LEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREV 433


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 224
           V  ++    HA  V + G+ F+ G+ S    GH  D+N  I +P+L++AL     + V  
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSN--IQQPKLIDALNTTNIELVAC 367

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   +  +T+ G ++T G    G LGHG+ +    PK +  L E   V  IA GP +   
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 339
           VT  G +++FG G+   LGHG++     PR + +   KG+  VR + G  H  A+     
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSL--KGLRTVRAACGVWHTAAVVEVMV 485

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SSG ++TWG G  G LGHG++  K +P  +++L      QV      T  L 
Sbjct: 486 GSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALT 545

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G VY  G   +G LG      +D     R+   L    V +I+ G YH  V+T R  +
Sbjct: 546 TSGHVYTMGSPVYGQLG---NSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEV 602

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH  +     PT
Sbjct: 603 YTWGKGSNGRLGHGDVDDRNSPT 625



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASEN 174
           +  G +H+  ++ S  +++ G    GVLGHG E +  V   R+NF     HV  ++    
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVP-KRVNFLLEGIHVSSIACGPY 423

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT- 233
           H A V  +GQ+FT GD +    GH D  + +F PR V++LKG+   +   G+  T  +  
Sbjct: 424 HTAVVTSAGQLFTFGDGTFGVLGHGD-KKSVFIPREVDSLKGLRTVRAACGVWHTAAVVE 482

Query: 234 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
                        G + T G    G+LGHG+   +  P  +A L E  +  Q+A G S  
Sbjct: 483 VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP-NFCQVACGHSLT 541

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+T +G VY+ GS     LG+    D   P  ++    K   V  ++ G  HV  L S 
Sbjct: 542 VALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSF-VEEIACGAYHVAVLTSR 599

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             VYTWGKG  G LGHGD  D+  P  + SLK
Sbjct: 600 TEVYTWGKGSNGRLGHGDVDDRNSPTLVESLK 631



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 17/270 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G   + G  + G+LGHG   +   PK I  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
              ++  +A G  +  AVT +G +Y++G G    LGHG +     P+ +  F  +GIHV 
Sbjct: 359 TT-NIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRV-NFLLEGIHVS 416

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            ++ G  H   + S+G ++T+G G  G LGHGD+    +P  + SLK    V+       
Sbjct: 417 SIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWH 476

Query: 388 TFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
           T  +V+             G ++ +G    G LG    G  +  L P  + +L   +  Q
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLG---HGNKEPKLVPTCVAALVEPNFCQ 533

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           ++ G   TV +T  G ++  G     QLG+
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGN 563



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 112/248 (45%), Gaps = 22/248 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT +++++  +F+ G    GVLGHG + +  +    ++       V+ +    H
Sbjct: 418 IACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIP-REVDSLKGLRTVRAACGVWH 476

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD      GH +   P   P  V AL      QV 
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN-KEPKLVPTCVAALVEPNFCQVA 535

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  GHV+T GS  +GQLG+    D  TP  +        V +IA G  ++ 
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLGNSHA-DGKTPNRVEGKLHKSFVEEIACGAYHVA 594

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +T    VY++G GSN  LGHG+  D   P  +++ + K   V  ++ G     A+    
Sbjct: 595 VLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDK--QVKSIACGTNFTAAV---- 648

Query: 344 YVYTWGKG 351
            ++ W  G
Sbjct: 649 CIHRWASG 656



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 8/181 (4%)

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           GS+F +    + D L P+A+++     + V  ++ G +H V +   G  ++WG+   G L
Sbjct: 287 GSSFDI----KMDSLLPKALES--TIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRL 340

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           GHG + +   P+ + +L +     V   +  +  +  +G +Y +G   FG LG  +  VS
Sbjct: 341 GHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNE-VS 399

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
             V + R+   L   HVS I+ G YHT VVT  G+LF FGD     LGH   +    P E
Sbjct: 400 HWVPK-RVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPRE 458

Query: 477 I 477
           +
Sbjct: 459 V 459


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 148/301 (49%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G + + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     +V +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     + +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEESVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LRA  V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H+V V+  E+H+  +
Sbjct: 43  GDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADEHIVHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEEDRESPCHVKLLRAQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   +H+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 30  FISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADEH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T +    P+ I  L +  +++Q++ 
Sbjct: 86  IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T + V+  R I   +   ++QVS  
Sbjct: 87  VHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEESVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR-AQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  P++   +     K+V  G N + FL   G V+TCG NT GQLGH    ++P  + I 
Sbjct: 69  VAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP--EQIG 126

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L +  ++V +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ 
Sbjct: 127 ALAD-QNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQT 185

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVC 382
           I  ++VS G+ H +AL + G  +TWGK   G LG G E   +  P+ + SL+     QV 
Sbjct: 186 I--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVA 243

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  +G+V+ +G    G LG  D    +    P  +  LR   V  IS G  H
Sbjct: 244 AGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRES---PCHVKLLRTQKVVYISCGEEH 300

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T V+T  G +F FG     QLGHD++   + P  + 
Sbjct: 301 TAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 336



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N+P      + AL    
Sbjct: 77  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQN 132

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ RG + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 133 IVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 191

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 192 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 249

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 250 FALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 309

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 310 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 366

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 367 GCGARGQLG 375



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 151/320 (47%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  ++V V+  E+H+  +
Sbjct: 90  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQNIVHVACGESHSLAL 146

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 147 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 206

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+++G  +
Sbjct: 207 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFAWGMNN 265

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 266 AGQLGLSDEEDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 323

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 324 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 380

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 381 NVKCPSPVKGYWAAHNGQLS 400



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 137/297 (46%), Gaps = 22/297 (7%)

Query: 113 NQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVS 170
           N + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS
Sbjct: 132 NIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVS 190

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   + 
Sbjct: 191 CGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSF 250

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            L++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G 
Sbjct: 251 ALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGG 309

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWG 349
           V++FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G
Sbjct: 310 VFTFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 367

Query: 350 KGYCGALGHGDEIDKTLPEPLSS---------------LKSHLAVQVCARKRKTFVL 391
            G  G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 368 CGARGQLGTGHTCNVKCPSPVKGYWAAHNGQLSARADRFKYHIVKQIFSGGDQTFVL 424


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2761 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKK 2820

Query: 222  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 2821 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-AKRIRDIACGS 2879

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 337
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 2880 SHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL--GHRVIQVACGSRDAQTL 2937

Query: 338  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 2938 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2997

Query: 398  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 2998 WTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3054

Query: 458  NERAQLGHDTLRGCLEPTEIFIQEME 483
            N+  Q G+ T     +PT   +Q +E
Sbjct: 3055 NDHGQQGNGTTTVNRKPT--LVQGLE 3078



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2731 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 2789

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2790 ATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2849

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 2850 LGHFSRMNCDKPRLIEALKAKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 2907

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2908 TTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2964

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 2965 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3012



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 148/321 (46%), Gaps = 29/321 (9%)

Query: 155 FTRINFP------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP 208
           +  +N P      S+  V Q+  SE     +  SG V+T    S+              P
Sbjct: 399 YANVNGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYKST-----------TLAP 447

Query: 209 RLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
            L+ +L      ++ A  +   +L +   G V + G    G+LGHGDT     P  IA  
Sbjct: 448 MLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAF 507

Query: 267 --EEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             ++ G  VV IA G +Y  A+T +G +Y++G G+   LGHG   D+  P  +     KG
Sbjct: 508 NGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTAL--KG 565

Query: 324 IHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           + VV V+  +GD   +A+  +G V++WG G  G LG G       P+ +  L+    V+V
Sbjct: 566 LKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKV 625

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
           C   + +  L   G VY +G      LG    G  + V  P++LD+L+   V  ++ G  
Sbjct: 626 CCGSQFSVALTKDGQVYTWGKGDNQRLG---HGTDEHVRFPKLLDTLQGKKVVDVAVGST 682

Query: 442 HTVVVTDRGRLFGFGDNERAQ 462
           H + +TD G +  +G N++ Q
Sbjct: 683 HCLALTDDGEVHSWGSNDKLQ 703



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 141/294 (47%), Gaps = 20/294 (6%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 3847 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 3905

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 3906 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 3964

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T + +V+S+G G    LG G       P  I +    G+ V++V  G +  VAL  SG 
Sbjct: 3965 LTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSL--TGLGVIKVECGSQFSVALTKSGA 4022

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW-- 402
            VYTWGKG    LGHG +     P  +  L+    + +           + G +  F W  
Sbjct: 4023 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGL 4082

Query: 403  ----MGFGSL--------GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
                +G G +        G    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4083 PRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3833 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3892

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 3893 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 3951

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + L     V++WG G  G LG G       P  + SL     ++V    
Sbjct: 3952 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGS 4011

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4012 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4068

Query: 446  VTDRGRL-----------------FGFGDNERAQLGHDTLRGCLEP 474
             T+ GR+                 + +GDN+  QLG  T      P
Sbjct: 4069 CTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRP 4114



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 110/202 (54%), Gaps = 9/202 (4%)

Query: 272 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVV 327
           +V++AA P   + LA++ NG V+S+G G    LGHG+     +P  I  F  ++ G HVV
Sbjct: 458 MVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVV 517

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARK 385
            ++ G  +  A+   G +YTWG+G  G LGHG   D+T P  +++LK    V V   +  
Sbjct: 518 HIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGD 577

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            +T  + + G V+ +G   +G LG   RG SD    P++++ L+   + ++  G   +V 
Sbjct: 578 AQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 634

Query: 446 VTDRGRLFGFGDNERAQLGHDT 467
           +T  G+++ +G  +  +LGH T
Sbjct: 635 LTKDGQVYTWGKGDNQRLGHGT 656



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 132/292 (45%), Gaps = 28/292 (9%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 174
           G+++  L SN  VFS G    G LGHG      E T   +F      +  HVV ++    
Sbjct: 467 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFN--GKQAGKHVVHIACGST 524

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           ++A +   G+++T G  +    GH  +      P LV ALKG+    V  G      L +
Sbjct: 525 YSAAITVDGELYTWGRGNYGRLGHGSSEDQT-TPMLVTALKGLKVVDVACGSGDAQTLAV 583

Query: 235 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY
Sbjct: 584 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVY 642

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G G N  LGHG       P+ + T   +G  VV V+ G  H +AL   G V++WG   
Sbjct: 643 TWGKGDNQRLGHGTDEHVRFPKLLDTL--QGKKVVDVAVGSTHCLALTDDGEVHSWGSN- 699

Query: 353 CGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
              L H D +  +K  P+ L  L S           K  V +  G    F W
Sbjct: 700 -DKLQHFDTLFSNKKQPKALPGLNS-----------KHIVGISCGPGQSFAW 739



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3812

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3813 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 3872

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG   
Sbjct: 3873 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG--- 3929

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3930 HGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 3989

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 3990 CKTPMKI 3996



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  VFS G    G LGH      C     I    A  +  ++   +H+A +
Sbjct: 2827 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKAKRIRDIACGSSHSAAI 2885

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 2886 TSSGELYSWGLGEYGRLGHGD-NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 2944

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2945 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3003

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3004 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3061

Query: 358  HG 359
            +G
Sbjct: 3062 NG 3063



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  I++S  ++S G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2875 IACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ-LRPKLVKVLLGHRVIQVACGSRD 2933

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2934 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2992

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2993 KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3051

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3052 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3094



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 21/210 (10%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QI       L ++ +G VY+     N+      +   L P  I +   + +  +    
Sbjct: 416 VTQIVCSEKGFLILSSSGAVYT----QNY------KSTTLAPMLIHSLSSRKMVKLAAHP 465

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-----SHLAVQVCARKR 386
             +H +AL S+G V++WG G  G LGHGD      P  +++        H+    C    
Sbjct: 466 DGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTY 525

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTV 444
              + VD G +Y +G   +G LG    G S+    P ++ +L+   V  ++  +G   T+
Sbjct: 526 SAAITVD-GELYTWGRGNYGRLG---HGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 581

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            VT+ G+++ +GD +  +LG     GC  P
Sbjct: 582 AVTENGQVWSWGDGDYGKLGRGGSDGCKTP 611



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3747 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3806

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3807 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 3863

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3864 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3890


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 149/313 (47%), Gaps = 20/313 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q+S    H A V + G+VFT G+ S    GH   +     P+LVE+L       V  G
Sbjct: 267 VHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDH-FTHPKLVESLAVTNIDYVACG 325

Query: 226 LNFTGFLTIRGHVHTCG--SNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  ++  G + T G  SN  G LGHG  +    PK ++ PLE +  V+ IA G  + 
Sbjct: 326 EYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGL-QVLSIACGTWHS 384

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
              T NG +++FG G+   LGHG++     P+ +Q+    G+  ++V+ G  H  A+   
Sbjct: 385 ALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSL--NGLKTIKVACGVWHTAAIVEV 442

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L 
Sbjct: 443 MSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALT 502

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G   +G LG P    S+  +   + D L    V +IS G YHT V+T R  +
Sbjct: 503 TSGHVFTMGGSAYGQLGNPS---SNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEV 559

Query: 453 FGFGDNERAQLGH 465
           F +G     QLGH
Sbjct: 560 FTWGRGANGQLGH 572



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 16/297 (5%)

Query: 201 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           T   +  P+ +E+   +   Q++ G+     +T +G V T G  + G+LGHG       P
Sbjct: 249 TKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHP 308

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 318
           K +  L  V ++  +A G  +  A++ +G ++++G GSN    LGHG       P+ + +
Sbjct: 309 KLVESL-AVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRV-S 366

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
              +G+ V+ ++ G  H     S+G ++T+G G  GALGHGD    + P+ L SL     
Sbjct: 367 GPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKT 426

Query: 379 VQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
           ++V      T  +V+  S  G        F W G G       G  D  L P  + SL  
Sbjct: 427 IKVACGVWHTAAIVEVMSQSGSNISSRKLFTW-GDGDKHRLGHGNKDAYLLPTCVSSLID 485

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 484
           ++  Q++ G   TV +T  G +F  G +   QLG+ +  G   CL    +  + +EE
Sbjct: 486 YNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEE 542



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 130/272 (47%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  IS S     +  GS+  G+LGHG + +  +   R++ P     V+ ++  
Sbjct: 322 VACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIP-KRVSGPLEGLQVLSIACG 380

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H+A    +G++FT GD +    GH D  + +  P+ +++L G+   +V  G+  T  +
Sbjct: 381 TWHSALATSNGKLFTFGDGTFGALGHGD-RKSVSSPKELQSLNGLKTIKVACGVWHTAAI 439

Query: 233 T----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
                          + T G     +LGHG+      P  ++ L +  +  Q+A G +  
Sbjct: 440 VEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDY-NFQQLACGHTMT 498

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+T +G V++ G  +   LG+   + ++ P  +Q  R  G  V  +S G  H   L S 
Sbjct: 499 VALTTSGHVFTMGGSAYGQLGNPSSNGKI-PCLVQD-RLVGEFVEEISCGAYHTAVLTSR 556

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V+TWG+G  G LGHGD  D+ LP  + +LK
Sbjct: 557 SEVFTWGRGANGQLGHGDTEDRKLPTLVEALK 588



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 110/253 (43%), Gaps = 30/253 (11%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G +H+ L  SN  +F+ G    G LGHG +     S   +   +    ++V+   
Sbjct: 375 LSIACGTWHSALATSNGKLFTFGDGTFGALGHG-DRKSVSSPKELQSLNGLKTIKVACGV 433

Query: 174 NHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            H A ++    QSG      ++FT GD      GH + +  +  P  V +L     +Q+ 
Sbjct: 434 WHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLL-PTCVSSLIDYNFQQLA 492

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAAG 278
            G   T  LT  GHV T G + +GQLG+      P+     P       VG  V+ I+ G
Sbjct: 493 CGHTMTVALTTSGHVFTMGGSAYGQLGN------PSSNGKIPCLVQDRLVGEFVEEISCG 546

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             +   +T    V+++G G+N  LGHG+  D   P  ++  + +  HV  +S G      
Sbjct: 547 AYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKER--HVKNLSCG----AN 600

Query: 339 LDSSGYVYTWGKG 351
             SS  ++ W  G
Sbjct: 601 FTSSICIHKWVSG 613


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 137/266 (51%), Gaps = 20/266 (7%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 274
           K+V  G +   FL   G V+TCG NT GQLGH    ++P        E++G+     ++ 
Sbjct: 37  KEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQP--------EQIGALADQHIIH 88

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 333
           +A G S+ LA++  G ++S+G+GS+  LG     D +  PR IQ   ++ I  ++VS G+
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGN 146

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            H +AL + G  +TWGK   G LG G E   +T P+ + SL+     QV A    +F L 
Sbjct: 147 WHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G+V+G+G    G LG  D    +    P  +  LR   V  IS G  HT V+T  G +
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRES---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGV 263

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIF 478
           F FG     QLGHD++   + P  + 
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVL 289



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 149/320 (46%), Gaps = 11/320 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  Q     +I   +  H++ V+  E+H+  +
Sbjct: 43  GDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFF 159

Query: 240 TCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G      T P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQTSPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG  ++ D   P  ++  R +   VV +S G+EH   L  SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG    G + 
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333

Query: 418 KVLRPRILDSLRAHHVSQIS 437
            V  P  +    A H  Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 158/309 (51%), Gaps = 14/309 (4%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   +H  F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGN----QPEQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            AL  SG V+ WG    G LG  DE D+  P  +  L++   V +   +  T VL  +G 
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG    G LG     ++D+V  PR +  L    V+QI+ G  HT+  V   G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319

Query: 456 GDNERAQLG 464
           G   R QLG
Sbjct: 320 GCGARGQLG 328



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 87  IHVACGESHSLALSDQGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ FT G NS    G          P+ V +L+G+P  QV AG   +  L
Sbjct: 146 NWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL 205

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G N  GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322

Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
             G LG G   +   P P+                  K H+  Q+ +   +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 162/355 (45%), Gaps = 20/355 (5%)

Query: 131 SVFSCGSSL---CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
           SVFS G +     G+ G G +     S   +   +   + ++S    H   +L+ G V  
Sbjct: 2   SVFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMM 61

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
           CG N     G    +RP      V A + +   QV+ G + T  +T RG V   G N  G
Sbjct: 62  CGANDR---GQLGQDRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRG 118

Query: 248 QLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           Q G   GD+ D+  P+ +  L     V Q+A G  + +A+T +G ++++G  S   LG G
Sbjct: 119 QCGLSTGDSEDKRKPRFLKSLSSC-QVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIG 177

Query: 306 EQHDEL---QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
                L    P+ + +    G+ + R++ G  H  AL  SG V+ WGK  CG LG G   
Sbjct: 178 APGRTLYRDHPQQLSSL--PGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTE 235

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
           D+  P PL +LK+     +   +  T +L  +G ++ FG    G LG    G     + P
Sbjct: 236 DRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLG---HGSHSNEVNP 292

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERAQLG--HDTLRGCLEP 474
           R +       ++Q++ G  HT+V+  R GR F  G   + QLG  +D+ + C  P
Sbjct: 293 RSVQGFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASP 347



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 129/276 (46%), Gaps = 15/276 (5%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIAPL 266
           PR V AL G   ++++ GL  T  L   G V  CG+N  GQLG     DRP  + +  P 
Sbjct: 29  PREVPALAGKQIREISCGLRHTCVLLRDGTVMMCGANDRGQLGQ----DRPGSELAHVPA 84

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGI 324
            E   + Q++ G  + LAVT  G V  +G        L  G+  D+ +PR +++      
Sbjct: 85  TETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSL--SSC 142

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQV 381
            V +V+ G  H +AL   G ++ WG    G LG    G  + +  P+ LSSL      ++
Sbjct: 143 QVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRL 202

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
                 +F L  +G+V+G+G    G LG    G ++  + P  L +L+   V  I+ G  
Sbjct: 203 ACGGWHSFALSVSGAVFGWGKNNCGQLGL---GTTEDRVSPTPLKNLKTKQVKYIACGQN 259

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +T ++T  G LF FG     QLGH +    + P  +
Sbjct: 260 YTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSV 295



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 106/247 (42%), Gaps = 13/247 (5%)

Query: 238 VHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           V + G    GQLG    GD +   +     P      + +I+ G  +   +  +G V   
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62

Query: 295 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK--- 350
           G+     LG      EL    A +T     + + +VS G++H +A+   G V  WG+   
Sbjct: 63  GANDRGQLGQDRPGSELAHVPATET-----LVITQVSCGNDHTLAVTDRGQVLGWGRNDR 117

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G CG L  GD  DK  P  L SL S    QV      +  L   G ++ +G   FG LG 
Sbjct: 118 GQCG-LSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGI 176

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
              G +     P+ L SL    + +++ G +H+  ++  G +FG+G N   QLG  T   
Sbjct: 177 GAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTED 236

Query: 471 CLEPTEI 477
            + PT +
Sbjct: 237 RVSPTPL 243



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 133/341 (39%), Gaps = 54/341 (15%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G +H+  +S S +VF  G + CG LG G  T   VS T +       V  ++  +N
Sbjct: 201 RLACGGWHSFALSVSGAVFGWGKNNCGQLGLG-TTEDRVSPTPLKNLKTKQVKYIACGQN 259

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           + A +  SG +F  G  S    GH   +  +  PR V+   G    QV  G   T  L  
Sbjct: 260 YTAILTASGGLFLFGQGSEGQLGHGSHSNEV-NPRSVQGFLGSEITQVACGRQHTLVLEG 318

Query: 235 R-GHVHTCGSNTHGQLGHGDTLDRPTPKSIA-----PLEEVGSVVQIAAGPSYMLAVTGN 288
           R G   + G  + GQLG    LD  + KS A     P E   S    + G      +   
Sbjct: 319 RTGRFFSLGQGSKGQLG----LDNDSSKSCASPVPGPWEAPSSTEGCSNGEESRSII--- 371

Query: 289 GVVYSFGSGSNFCL---GHGEQH------------------DELQP-----------RAI 316
           G +++ G   +FC+   G+   H                  D LQ            +A+
Sbjct: 372 GSIFA-GGDQSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAV 430

Query: 317 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
           QT     + +   +  +   +    SG ++ +G+G  G LGHG   ++  P  +     +
Sbjct: 431 QTLE---MALSSPACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGN 487

Query: 377 LAVQVCARKRKTFVLVD-TGSVYGFGWMGFGSLGFPDRGVS 416
              QV   ++ T VL   TG  Y  G    G LG  D G S
Sbjct: 488 EITQVACGRQHTLVLEGRTGGFYSLGQGSKGQLGL-DNGSS 527



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 141/327 (43%), Gaps = 51/327 (15%)

Query: 116 QITTGRYHTLLISNSS--VFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAAHVVQVSAS 172
           Q+  GR HTL++   +   FS G    G LG   ++++ C S     + + +     S  
Sbjct: 305 QVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPSSTEGCSNG 364

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHR--DTNRPI-FRPRLVEALKGVPCKQVTAGLNFT 229
           E   + +   G +F  GD S FC   R  D + P+ FR    EA+  +    +T  L   
Sbjct: 365 EESRSII---GSIFAGGDQS-FCIVSRGNDPDHPLDFR----EAIPSIEPVVLTKDL--- 413

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
                             ++     L  P+ K++  LE   ++   A   +  L   G+G
Sbjct: 414 ----------------LQEVSESSPLLEPS-KAVQTLEM--ALSSPACLNASFLVGAGSG 454

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS-SGYVYTW 348
            ++ FG GS   LGHG   +E+ PR+++ F   G  + +V+ G +H + L+  +G  Y+ 
Sbjct: 455 GLFLFGQGSEGQLGHGSHSNEVNPRSVKDFL--GNEITQVACGRQHTLVLEGRTGGFYSL 512

Query: 349 GKGYCGALGHGDEIDKT----LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           G+G  G LG  +   K+    +P P  +  S    + C+   ++  ++  GS++  G   
Sbjct: 513 GQGSKGQLGLDNGSSKSCASLVPGPWEAPSS---TEGCSNGEESRSII--GSIFAGGDQS 567

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAH 431
           F  +    RG    +L   ++ +++ H
Sbjct: 568 FCIV---SRGNISGILNTHLIPTIQKH 591


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4100

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4101 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 4159

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4218

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4219 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4276

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4277 DNDEGQLGDG 4286



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 358  HG 359
            +G
Sbjct: 3292 NG 3293



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 145/311 (46%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           + +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  KSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 275
                V+ G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    V+ +G      LG G E   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 453
           G V+ FG  G+G LG      +   + PR +  L    V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R +   +V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G E 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 10/314 (3%)

Query: 156  TRINF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            T ++F  S   VVQ   +   A+ V Q+  V+  G N     G    ++ I  P   E L
Sbjct: 2894 TSVSFLASDWEVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLGGLKGSK-IKLPVHSEVL 2952

Query: 215  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVV 273
              +    +  G      ++  G ++ CG  T+G+LG GD  +   PK I  L + +   V
Sbjct: 2953 SKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKV 3012

Query: 274  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
             + +G  + LA+T +G V+S+G G +  LGHG +    +PR I+  + K I    ++ G 
Sbjct: 3013 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIR--DIACGS 3070

Query: 334  EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVL 391
             H  A+ S+G +YTWG G  G LGHGD      P+ + +L     +QV   +R  +T  L
Sbjct: 3071 GHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMAL 3130

Query: 392  VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
             + GSVY +G   FG LG   RG SD    P  +D L    V Q+  G   ++ +T  G 
Sbjct: 3131 TEDGSVYSWGDGDFGKLG---RGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGE 3187

Query: 452  LFGFGDNERAQLGH 465
            ++ +G  +  +LGH
Sbjct: 3188 VWTWGKGDYFRLGH 3201



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 152/311 (48%), Gaps = 13/311 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA   +Q++  E     V   G+V+  G  +      G  D+   +  P L+E+++ V  
Sbjct: 3925 SALRPIQLAGGEQTLFAVTADGKVYATGYGALGRLGTGGVDS---VMVPTLLESIQHVFI 3981

Query: 220  KQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIA 276
            K+V   +G      L+  GHV++ G    G+LGHG+ +    PK I  L  +G+ +V IA
Sbjct: 3982 KKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEAL--LGTEIVDIA 4039

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +  A++  G +Y++G G    LGHG+  D+L+P  +   +   +  V   +GD   
Sbjct: 4040 CGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQT 4099

Query: 337  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            + +     V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+
Sbjct: 4100 LCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGA 4159

Query: 397  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            VY +G   +  LG    G  D V RPR + +L+   +  I+TG  H V  +D+G ++ +G
Sbjct: 4160 VYTWGKGDYHRLG---HGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWG 4216

Query: 457  DNERAQLGHDT 467
            DN+  QLG  T
Sbjct: 4217 DNDEGQLGDGT 4227



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 147/320 (45%), Gaps = 17/320 (5%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2941 SKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNN-VGEPK 2999

Query: 210  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    P+ I  L+
Sbjct: 3000 PIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALK 3059

Query: 268  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
                +  IA G  +  A+  NG +Y++G G    LGHG+    L+P+ +      G  V+
Sbjct: 3060 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDAL--VGQRVI 3116

Query: 328  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            +V+ G  D   +AL   G VY+WG G  G LG G       P P+  L     VQV    
Sbjct: 3117 QVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGA 3176

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L   G V+ +G   +  LG    G    V RP +++ LR   V  ++ G  H + 
Sbjct: 3177 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLA 3233

Query: 446  VTDRGRLFGFGDNERAQLGH 465
            VTD G+++ +GDN+  Q G+
Sbjct: 3234 VTDAGQVYAWGDNDHGQQGN 3253



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 155/329 (47%), Gaps = 18/329 (5%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTCG 189
            +++CG    G LG G +         I F S   +  V V +   HA  + Q G+VF+ G
Sbjct: 2976 LYACGEGTNGRLGLG-DNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWG 3034

Query: 190  DNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
            +      GH   NR  + +PRL+EALK    + +  G   +  +   G ++T G   +G+
Sbjct: 3035 EGEDGKLGH--GNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3092

Query: 249  LGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHG 305
            LGHGDT     PK +  L  VG  V+Q+A G   +  +A+T +G VYS+G G    LG G
Sbjct: 3093 LGHGDTTTHLKPKLVDAL--VGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRG 3150

Query: 306  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
                   P  +   R  G+ VV+V  G +  +AL   G V+TWGKG    LGHG++    
Sbjct: 3151 GSDGCYSPLPVD--RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVR 3208

Query: 366  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
             P  +  L+    V V         + D G VY +G    G  G     V+ K   P ++
Sbjct: 3209 RPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRK---PSLV 3265

Query: 426  DSLRAHHVSQISTGLYHTV--VVTDRGRL 452
             +L    V++++ G  H++  V+TD+  L
Sbjct: 3266 HNLEDAKVNRVACGSSHSIAWVLTDQPTL 3294



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 151/325 (46%), Gaps = 16/325 (4%)

Query: 126  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENHAAFVLQ 181
            + ++  V++ G    G LG G   +  V        S  HV    V V++   H   +  
Sbjct: 3942 VTADGKVYATGYGALGRLGTGGVDSVMVPTL---LESIQHVFIKKVAVNSGGKHCLALSS 3998

Query: 182  SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             G V++ G+      GH   NR  + RP+L+EAL G     +  G + +  ++  G ++T
Sbjct: 3999 EGHVYSWGEGDDGKLGH--GNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYT 4056

Query: 241  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSN 299
             G   +G+LGHGD+ D+  P  +  L+    + V   +G +  L VT +  V+S+G G  
Sbjct: 4057 WGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4116

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
              LG G       P  I++    G+ VV+V  G +  VAL  SG VYTWGKG    LGHG
Sbjct: 4117 GKLGRGGSDGCKVPMKIESL--AGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4174

Query: 360  DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
             +     P  +S+L+    V +           D G VY +G    G LG    G +   
Sbjct: 4175 TDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLG---DGTTHAQ 4231

Query: 420  LRPRILDSLRAHHVSQISTGLYHTV 444
              PR++ +L+  ++++++ G  HT+
Sbjct: 4232 QSPRLVHALQGKNITRVACGSAHTL 4256



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  P P +S++ L  +    Q+A G   + AVT +G VY
Sbjct: 3894 GAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPI----QLAGGEQTLFAVTADGKVY 3949

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G     + P  +++ +   I  V V++G +H +AL S G+VY+WG+G 
Sbjct: 3950 ATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4009

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+ I    P+ + +L     V +      +  +   G +Y +G   +G LG  D
Sbjct: 4010 DGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGD 4069

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               SD  L+P ++ +L+ + V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 4070 ---SDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDG 4126

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4127 CKVPMKI 4133



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 10/244 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 2924 VYVWGLNDKDQLGGLKGSKIKLPVHSEV--LSKLKPI-HIAGGSKTLFVVSQEGKLYACG 2980

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+N  LG G+ ++  +P+ I    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2981 EGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 3040

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+ +    P  + +LKS     +      +  +   G +Y +G   +G LG  D   
Sbjct: 3041 LGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTTT 3100

Query: 416  SDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                L+P+++D+L    V Q++ G     T+ +T+ G ++ +GD +  +LG     GC  
Sbjct: 3101 H---LKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGGSDGCYS 3157

Query: 474  PTEI 477
            P  +
Sbjct: 3158 PLPV 3161



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 13/260 (5%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 176
            G++   L  +  VFS G    G LGHG      VS  +   I    +  +  ++    H+
Sbjct: 3018 GKHALALTQDGKVFSWGEGEDGKLGHGNR----VSLDKPRLIEALKSKRIRDIACGSGHS 3073

Query: 177  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 234
            A +  +G+++T G       GH DT   + +P+LV+AL G    QV  G     T  LT 
Sbjct: 3074 AAIASNGELYTWGLGEYGRLGHGDTTTHL-KPKLVDALVGQRVIQVACGSRDAQTMALTE 3132

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
             G V++ G    G+LG G +    +P  +  L  +G VVQ+  G  + LA+T  G V+++
Sbjct: 3133 DGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLG-VVQVECGAQFSLALTKYGEVWTW 3191

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G  F LGHG  H   +P  ++  R  G  VV V+ G  H +A+  +G VY WG    G
Sbjct: 3192 GKGDYFRLGHGNDHHVRRPTLVEGLR--GKKVVHVAVGALHCLAVTDAGQVYAWGDNDHG 3249

Query: 355  ALGHGDEIDKTLPEPLSSLK 374
              G+G  +    P  + +L+
Sbjct: 3250 QQGNGSTMVNRKPSLVHNLE 3269



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 115/244 (47%), Gaps = 4/244 (1%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT +G V++ G+   G+LGHGD+     P+ I  L +  +V  IA G +Y  A++  G +
Sbjct: 516 LTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSD-RTVTYIACGSTYSAAISSTGEL 574

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            ++G GS   LGHG   D   P  +       +  V   +GD   + + +SG V++WG G
Sbjct: 575 LTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDG 634

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G      LP+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 635 DYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLG-- 692

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
             G  + V  P++++ LR   V  +S G  H + +T+   ++G+G N+  Q+        
Sbjct: 693 -HGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSLGAVV 751

Query: 472 LEPT 475
            EPT
Sbjct: 752 SEPT 755



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 131/296 (44%), Gaps = 25/296 (8%)

Query: 113  NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSA---AHVVQ 168
             ++ + +G  H L +S+   V+S G    G LGHG      +++ R     A     +V 
Sbjct: 3982 KKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNR----ITYDRPKLIEALLGTEIVD 4037

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++   +H+A +  +G ++T G       GH D++  + +P +V AL+G     V  G   
Sbjct: 4038 IACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQL-KPTVVTALQGYKVIDVACGSGD 4096

Query: 229  TGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L  T   +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T
Sbjct: 4097 AQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLG-VVKVECGSQFSVALT 4155

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +PR +     +G  +V ++ G  H VA    G VY
Sbjct: 4156 RSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSAL--QGKKIVSIATGSLHCVACSDKGEVY 4213

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            TWG    G LG G    +  P  + +L+            K    V  GS +   W
Sbjct: 4214 TWGDNDEGQLGDGTTHAQQSPRLVHALQG-----------KNITRVACGSAHTLAW 4258



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 6/242 (2%)

Query: 163 AAHVVQVSASEN--HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
           A  VVQ+++  +  H   +   G V++ G+      GH D+      P+++E L      
Sbjct: 498 ADDVVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFS-CDEPQVIEVLSDRTVT 556

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGP 279
            +  G  ++  ++  G + T G  ++G+LGHG   D   P  +  L     + V   +G 
Sbjct: 557 YIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGD 616

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           S  L VT +G+V+S+G G    LG G       P+ +     +  +VV+V  G +   AL
Sbjct: 617 SQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQ--NVVKVFCGGQFSAAL 674

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
            + G VYTWGKG    LGHG+E     P+ +  L++     +         + +   VYG
Sbjct: 675 TAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYG 734

Query: 400 FG 401
           +G
Sbjct: 735 WG 736



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 10/245 (4%)

Query: 111 AGNQMQITT---GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 167
           A + +QI +   G+++  L +   V+S G+   G LGHG ++  C     I   S   V 
Sbjct: 498 ADDVVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHG-DSFSCDEPQVIEVLSDRTVT 556

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AG 225
            ++    ++A +  +G++ T G  S    GH   +  I  P +V AL G     V   +G
Sbjct: 557 YIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDD-ISIPTVVTALNGHTVTHVACGSG 615

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            + T  +T  G V + G   +G+LG G +     PK +  L +  +VV++  G  +  A+
Sbjct: 616 DSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLD-QNVVKVFCGGQFSAAL 674

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T +G VY++G G ++ LGHG +     P+ ++  R K +    +S G+ H++A+     V
Sbjct: 675 TAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVR--DLSVGNLHILAITEDQLV 732

Query: 346 YTWGK 350
           Y WG+
Sbjct: 733 YGWGR 737



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
           + E+G V Q+      +L ++ +G VY    GS          +   P+++  F    + 
Sbjct: 455 IAEIG-VKQLCCTERALLILSLSGKVYMMYYGS----------ETQYPQSVYGFADDVVQ 503

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           +     G +H +AL + G VY+WG G  G LGHGD      P+ +  L       +    
Sbjct: 504 IASHPDG-KHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGS 562

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHT 443
             +  +  TG +  +G   +G LG    G+ D +  P ++ +L  H V+ ++  +G   T
Sbjct: 563 TYSAAISSTGELLTWGRGSYGRLG---HGICDDISIPTVVTALNGHTVTHVACGSGDSQT 619

Query: 444 VVVTDRGRLFGFGDNERAQLG 464
           + VT+ G +F +GD +  +LG
Sbjct: 620 LCVTNSGIVFSWGDGDYGKLG 640



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 17/162 (10%)

Query: 306  EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
            ++HDE   + +Q   R+          ++  ++ D SG +Y WG  + G LG  +     
Sbjct: 3869 QEHDE---QLLQWLSRRP---------EDWTLSWDGSGAIYGWGHNHRGQLGGLEGAKVK 3916

Query: 366  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            LP P  SL +   +Q+   ++  F +   G VY  G+   G LG    G  D V+ P +L
Sbjct: 3917 LPLPCESLSALRPIQLAGGEQTLFAVTADGKVYATGYGALGRLG---TGGVDSVMVPTLL 3973

Query: 426  DSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            +S++   + +++  +G  H + ++  G ++ +G+ +  +LGH
Sbjct: 3974 ESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4015


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3082

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3197

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3245



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VVQV+ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VVQVACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 178/405 (43%), Gaps = 24/405 (5%)

Query: 74   MSRNVQIELLNRCNGNWKRVL--RFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS 131
            M+ N  +++L+ C+  +KR    + +Q +    D    SAG                + +
Sbjct: 3914 MADNENMDVLHECHDVFKREQDEQLVQWMNRRPDDWTLSAGG---------------SGT 3958

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
            ++  G +  G LG G E  +    T     +    VQ+   E     V   G+++  G  
Sbjct: 3959 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4017

Query: 192  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +    G   T   +  P L+E+++ V  K+V   +G      L+  G V++ G    G+L
Sbjct: 4018 AGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4076

Query: 250  GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
            GHG+      P+ I  L  +  VV +AAG ++   +T  G ++++G G    LGHG+  D
Sbjct: 4077 GHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4135

Query: 310  ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
            +L+P+ ++  +   +  +   +GD   + L     V++WG G  G LG G      +P  
Sbjct: 4136 QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMK 4195

Query: 370  LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
            + SL     V+V    + +  L  +G+VY   W  F        G  D V RPR +  L+
Sbjct: 4196 IDSLTGLGVVKVECGSQFSVALTKSGAVY--TWQVFRDYHRLGHGSDDHVRRPRQVQGLQ 4253

Query: 430  AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
               V  I+TG  H V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4254 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4298



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 138/282 (48%), Gaps = 12/282 (4%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4105

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 345  VYTWG--KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            VYTW   + Y   LGHG +     P  +  L+    + +           + G VY +G 
Sbjct: 4223 VYTWQVFRDY-HRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGD 4281

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4282 NDEGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4320



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 358  HG 359
            +G
Sbjct: 3295 NG 3296



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G ++ +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4129

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           VVQ+A      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VVQVACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 114/286 (39%), Gaps = 61/286 (21%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4103

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--------------- 216
               H+A +  +G +FT G       GH D+   + +P+LVEAL+G               
Sbjct: 4104 GGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQT 4162

Query: 217  -----------------------------VPCK----------QVTAGLNFTGFLTIRGH 237
                                         VP K          +V  G  F+  LT  G 
Sbjct: 4163 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4222

Query: 238  VHTCGS-NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+T      + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G 
Sbjct: 4223 VYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCCTEDGEVYTWGD 4281

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
                 LG G  +   +PR +   + K I+  RV+ G  H +A  +S
Sbjct: 4282 NDEGQLGDGTTNAIQRPRLVAALQGKKIN--RVACGSAHTLAWSTS 4325



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 45.8 bits (107), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 357
            F     E+ D+ +       R+K       +AG E    + +   V+ WG      LG  
Sbjct: 2929 FLASDNEEEDDDKANTGSLVRKK-------AAGLESAATIRTK--VFVWGLNDKDQLGGL 2979

Query: 358  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2980 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 3033

Query: 417  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 3034 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3093

Query: 474  PTEI 477
            P  I
Sbjct: 3094 PRLI 3097


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA +VVQV+        V   G+++ CG+ ++   G   ++  I  PR + AL     K+
Sbjct: 2976 SALNVVQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKK 3035

Query: 222  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 3036 VAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 3094

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 337
            S+  A+T +G +YS+G G    LGHG+   +L+P+ ++     G  V++V+ G  D   +
Sbjct: 3095 SHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLL--GHRVIQVACGSRDAQTL 3152

Query: 338  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 3153 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 3212

Query: 398  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 3213 WTWGKGDYFRLG---HGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGD 3269

Query: 458  NERAQLGHDTLRGCLEPTEIFIQEME 483
            N+  Q G+ T     +PT   +Q +E
Sbjct: 3270 NDHGQQGNGTTTVNRKPT--LVQGLE 3293



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G ++ CG 
Sbjct: 2946 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGE 3004

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3005 ATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3064

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +Y+WG G  G LGHGD 
Sbjct: 3065 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYSWGLGEYGRLGHGDN 3122

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3123 ATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3179

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3180 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3227



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4016 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4075

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  V  VV IAAG ++   +T +G ++++G G    LGHG+  D+L+P+ +   +   + 
Sbjct: 4076 LRGV-EVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4134

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + L     V++WG G  G LG G      +P  + SL      +V    
Sbjct: 4135 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGS 4194

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4195 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4251

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4252 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4280



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+GV    + AG 
Sbjct: 4030 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGVEVVDIAAGG 4088

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ +A  +G +  L 
Sbjct: 4089 AHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQG-HRVIDVACGSGDAQTLC 4147

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T + +V+S+G G    LG G       P  I +    G+ V +V  G +  VAL  SG 
Sbjct: 4148 LTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL--TGLGVTKVECGSQFSVALTKSGA 4205

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4206 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4265

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4266 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4302



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 148/323 (45%), Gaps = 24/323 (7%)

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
           S+  V Q+  SE     +  SG V+T    S+              P L+ +L      +
Sbjct: 435 SSLGVTQIVCSEKGFLILSSSGAVYTQNYKST-----------TLAPMLIHSLSSRKIVK 483

Query: 222 VTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIA 276
           + A  +   +L +   G V + G    G+LGHGD      P  IA    ++ G  VV IA
Sbjct: 484 LAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIA 543

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDE 334
            G +Y   +T +G +Y++G G+   LGHG   D+  P  +     KG+ VV V+  +GD 
Sbjct: 544 CGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTAL--KGLKVVDVACGSGDA 601

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
             +A+  +G V++WG G  G LG G       P+ +  L+    V+VC   + +  L   
Sbjct: 602 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD 661

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G VY +G      LG    G  + V  P++LD+L+   V  ++ G  H + +TD G +  
Sbjct: 662 GQVYTWGKGDNQRLG---HGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHS 718

Query: 455 FGDNERAQLGHDTLRGCLEPTEI 477
           +G N++ Q   DTL    +P  +
Sbjct: 719 WGSNDKLQ-HFDTLSNKKQPKAL 740



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 16/263 (6%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 174
           G+++  L SN  VFS G    G LGHG      E T   +F      +  HVV ++    
Sbjct: 490 GQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFN--GKQAGKHVVHIACGST 547

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           ++A +   G+++T G  +    GH  +      P LV ALKG+    V  G      L +
Sbjct: 548 YSAVITIDGELYTWGRGNYGRLGHGSSEDQT-TPMLVTALKGLKVVDVACGSGDAQTLAV 606

Query: 235 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V + G   +G+LG G +    TPK +  L+++  +V++  G  + +A+T +G VY
Sbjct: 607 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DIVKVCCGSQFSVALTKDGQVY 665

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G G N  LGHG       P+ + T   +G  VV V+ G  H +AL   G V++WG   
Sbjct: 666 TWGKGDNQRLGHGTDEHVRFPKLLDTL--QGKKVVDVAVGSTHCLALTDDGEVHSWGSN- 722

Query: 353 CGALGHGDEI-DKTLPEPLSSLK 374
              L H D + +K  P+ L  LK
Sbjct: 723 -DKLQHFDTLSNKKQPKALPGLK 744



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 120/249 (48%), Gaps = 8/249 (3%)

Query: 114  QMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
            ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A 
Sbjct: 4029 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGVEVVDIAAG 4087

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 230
              H+A +  SG++FT G       GH D+   + +P+LV+AL+G     V   +G   T 
Sbjct: 4088 GAHSACITASGELFTWGKGRYGRLGHGDSEDQL-KPKLVDALQGHRVIDVACGSGDAQTL 4146

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             LT    V + G   +G+LG G +     P  I  L  +G V ++  G  + +A+T +G 
Sbjct: 4147 CLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLG-VTKVECGSQFSVALTKSGA 4205

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG 
Sbjct: 4206 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4263

Query: 351  GYCGALGHG 359
               G LG G
Sbjct: 4264 NDEGQLGDG 4272



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPV----QLIGGEQTLFAVTADGKLY 3995

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3996 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 4055

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +  +G ++ +G   +G LG   
Sbjct: 4056 DGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG--- 4112

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4113 HGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDG 4172

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4173 CKIPMKI 4179



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3042 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALKTKRIRDIACGSSHSAAI 3100

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG++++ G       GH D N    RP+LV+ L G    QV  G     T  LT  G 
Sbjct: 3101 TSSGELYSWGLGEYGRLGHGD-NATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3159

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3160 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3218

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3219 DYFRLGHGTDVHVRKPQMVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3276

Query: 358  HG 359
            +G
Sbjct: 3277 NG 3278



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3930 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3989

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3990 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4046

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4047 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4073



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  +  V+S G    G LG G  +  C    +I+  +   V +V      + 
Sbjct: 4140 SGDAQTLCLTDDDMVWSWGDGDYGKLGRG-GSDGCKIPMKIDSLTGLGVTKVECGSQFSV 4198

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4199 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4257

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4258 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4303


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 155/339 (45%), Gaps = 13/339 (3%)

Query: 131 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            ++  G++  G LG G  E  Q ++ ++I +   + V QV+    H  F+  SG+V+ CG
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            N     GH     P  RP  +  L+     Q+  G   +  LT  G V + G N  GQL
Sbjct: 62  SNDYSQLGHE---LPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           GH    D      I       +VVQIA G ++ LA+T  G +YS+GS     LG     +
Sbjct: 119 GHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSE 178

Query: 310 ELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
             Q   P  + T    GI    ++ G  H   +  S  V+ WG+  CG LG  DE ++  
Sbjct: 179 LSQCNYPMRLTTLL--GIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAY 236

Query: 367 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           P  L +L++     V      +  L + G V+  G   +G LG    G S   + PR++ 
Sbjct: 237 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGFSSNEMLPRMVM 293

Query: 427 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 464
            L    +SQ++ G  HT+ +V  RGR++GFG     QLG
Sbjct: 294 ELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLG 332



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 140/305 (45%), Gaps = 23/305 (7%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  HTL ++ S  V++CGS+    LGH   T + +    +       + Q++    
Sbjct: 40  QVACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPEL---EDYVITQIACGSR 96

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  + + GQV + GDN     GH      I  P++V  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTC 156

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-------PKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            G +++ GSN +GQLG    +  P+       P  +  L  + +   IA G ++   ++ 
Sbjct: 157 CGELYSWGSNIYGQLG----VKSPSELSQCNYPMRLTTLLGIPAAA-IACGGNHTFLISK 211

Query: 288 NGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           +  V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V
Sbjct: 212 SSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGV 267

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMG 404
           +T G G  G LGHG   ++ LP  +  L      QV    R T  LV + G +YGFG   
Sbjct: 268 FTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGS 327

Query: 405 FGSLG 409
            G LG
Sbjct: 328 SGQLG 332



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 10/245 (4%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            ++  G+ +HGQLG G   D    TP  I P +   +V Q+A G  + L +T +G VY+ 
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQI-PWKPDSAVNQVACGHRHTLFLTASGKVYAC 60

Query: 295 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           GS     LGH     EL   R +Q    +   + +++ G  H +AL   G V +WG   C
Sbjct: 61  GSNDYSQLGH-----ELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 354 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
           G LGH  + D   LP+ +  L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 116 GQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKS 175

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                +   P  L +L     + I+ G  HT +++    +FG+G N   QLG +      
Sbjct: 176 PSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 473 EPTEI 477
            PT++
Sbjct: 236 YPTQL 240



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 234
           + F+   G VFTCG  +    GH  ++  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFSSNEML-PRMVMELMGSTISQVACGNRHTLALVPS 316

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQVV 345


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 150/303 (49%), Gaps = 12/303 (3%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VVQ++    H   + +   V++ G       GH D N   + P LV AL G   KQVT G
Sbjct: 41  VVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHAD-NHWKYVPHLVSALTGKSIKQVTCG 99

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA 284
              T  ++  G + T G   +G+LGHG+ +  P P  +     +G  V QIA G  +  A
Sbjct: 100 SYHTAAISDTGALWTWGGGMYGKLGHGNEVGHPAPCRVEAF--IGREVEQIACGSRHTAA 157

Query: 285 VTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +   G VY +G   N   G GE  +H  L P+ ++    KG+ + +++A   H  A+   
Sbjct: 158 LLAGGEVYCWGDRENGVCGIGEAAEHQYL-PKKLEAL--KGVKITQIAACGFHTAAITQD 214

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G +++WG+G  G LG G+E ++  P  +  L+     QV      +  + + G V  FG 
Sbjct: 215 GALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGG 274

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
              G LG  D+  +++ + P ++ +L    + Q++ G  HTV +++ G++F FG+ +  +
Sbjct: 275 GEHGQLGHGDK--TNRTV-PCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGK 331

Query: 463 LGH 465
           LGH
Sbjct: 332 LGH 334



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 137/277 (49%), Gaps = 5/277 (1%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+T G YHT  IS++ ++++ G  + G LGHG E        R+       V Q++    
Sbjct: 95  QVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEVGHPAP-CRVEAFIGREVEQIACGSR 153

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A +L  G+V+  GD  +  CG  +     + P+ +EALKGV   Q+ A    T  +T 
Sbjct: 154 HTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQ 213

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G + + G    G+LG G+  ++ TP  +  L+ V  V Q+A G  +   VT +G V +F
Sbjct: 214 DGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGV-RVKQVACGGFHSACVTEDGDVLTF 272

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G +  LGHG++ +   P  ++     GI  V+V+ G  H V L   G V+T+G G  G
Sbjct: 273 GGGEHGQLGHGDKTNRTVPCLVKALEGAGI--VQVTCGWSHTVTLSEDGKVFTFGNGDHG 330

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            LGHG      LP+ + SL +    +V +    T  L
Sbjct: 331 KLGHGANAKSALPKLVESLANMKVAKVASYNEHTVAL 367



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 170/358 (47%), Gaps = 19/358 (5%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI  G  HT++++ +  V+S G    G LGH     + V    ++  +   + QV+   
Sbjct: 42  VQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHL-VSALTGKSIKQVTCGS 100

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H A +  +G ++T G       GH  +   P   P  VEA  G   +Q+  G   T  L
Sbjct: 101 YHTAAISDTGALWTWGGGMYGKLGHGNEVGHPA--PCRVEAFIGREVEQIACGSRHTAAL 158

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
              G V+  G   +G  G G+  + +  PK +  L+ V  + QIAA   +  A+T +G +
Sbjct: 159 LAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGV-KITQIAACGFHTAAITQDGAL 217

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +S+G G    LG G + +++ P  ++    +G+ V +V+ G  H   +   G V T+G G
Sbjct: 218 WSWGEGKFGRLGQGNEKNQVTPCCVEGL--QGVRVKQVACGGFHSACVTEDGDVLTFGGG 275

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LGHGD+ ++T+P  + +L+    VQV      T  L + G V+ FG    G LG  
Sbjct: 276 EHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLG-- 333

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
             G + K   P++++SL    V+++++   HTV +          + E+A +  D L+
Sbjct: 334 -HGANAKSALPKLVESLANMKVAKVASYNEHTVALC-------HAEQEQAVMSFDFLK 383



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 131/282 (46%), Gaps = 8/282 (2%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +++ G      CG+  TN     P  VE LK +   Q+  G   T  LT    V + G  
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEM-PMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
             G+LGH D   +  P  ++ L    S+ Q+  G  +  A++  G ++++G G    LGH
Sbjct: 67  DDGRLGHADNHWKYVPHLVSALTGK-SIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGH 125

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID- 363
           G +     P  ++ F   G  V +++ G  H  AL + G VY WG    G  G G+  + 
Sbjct: 126 GNEVGHPAPCRVEAF--IGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEH 183

Query: 364 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
           + LP+ L +LK     Q+ A    T  +   G+++ +G   FG LG   +G     + P 
Sbjct: 184 QYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLG---QGNEKNQVTPC 240

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            ++ L+   V Q++ G +H+  VT+ G +  FG  E  QLGH
Sbjct: 241 CVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGH 282



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 5/237 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           +++ G    GQ G+G T D+  P  +  L+ + +VVQIA G  + + +T +  V+S+G G
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHL-TVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
            +  LGH + H +  P  +     K I   +V+ G  H  A+  +G ++TWG G  G LG
Sbjct: 67  DDGRLGHADNHWKYVPHLVSALTGKSIK--QVTCGSYHTAAISDTGALWTWGGGMYGKLG 124

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           HG+E+    P  + +       Q+    R T  L+  G VY +G    G  G  +   ++
Sbjct: 125 HGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGE--AAE 182

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
               P+ L++L+   ++QI+   +HT  +T  G L+ +G+ +  +LG    +  + P
Sbjct: 183 HQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTP 239



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 5/177 (2%)

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           + ++YS+G G +   G+G  +D+  P  ++  +   + VV+++ G  H V L     V++
Sbjct: 5   DSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKH--LTVVQIACGSGHTVVLTEDKDVWS 62

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG+G  G LGH D   K +P  +S+L      QV      T  + DTG+++ +G   +G 
Sbjct: 63  WGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGK 122

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           LG    G       P  +++     V QI+ G  HT  +   G ++ +GD E    G
Sbjct: 123 LG---HGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCG 176



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 6/143 (4%)

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +Y+WG+G  G  G+G   D+ +P P+  LK    VQ+      T VL +   V+ +G   
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGD 67

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG  D   +     P ++ +L    + Q++ G YHT  ++D G L+ +G     +LG
Sbjct: 68  DGRLGHAD---NHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLG 124

Query: 465 HDTLRGCLEP--TEIFI-QEMEE 484
           H    G   P   E FI +E+E+
Sbjct: 125 HGNEVGHPAPCRVEAFIGREVEQ 147


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGTRDAQ 3165

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV    R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGS 4208

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLGL---GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4100

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4101 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 4159

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4218

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4219 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4276

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4277 DNDEGQLGDG 4286



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGL 3174

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 358  HG 359
            +G
Sbjct: 3292 NG 3293



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 471  CLEPTEI 477
               P +I
Sbjct: 4187 SKVPMKI 4193



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LG G +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGLGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGTRD 3163

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G      V   +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPM-KIDSLTGLGVVKVECGSQFSV 4212

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G E 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 275
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 453
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
           +S +    +V   A N + +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 11/311 (3%)

Query: 161  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
            P+   +V+  A+   +A  +++ +VF  G N     G    ++ I  P   E L  +   
Sbjct: 2942 PNTGSLVRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVV 2999

Query: 221  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAG 278
            QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G
Sbjct: 3000 QVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSG 3059

Query: 279  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
              + +A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  A
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAA 3117

Query: 339  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGS 396
            + SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +R  +T  L D G 
Sbjct: 3118 ITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 397  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   ++ +T  G ++ +G
Sbjct: 3178 VFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 3234

Query: 457  DNERAQLGHDT 467
              +  +LGH T
Sbjct: 3235 KGDYFRLGHGT 3245



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4211

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+QV+ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRITKPEP 753



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 358  HG 359
            +G
Sbjct: 3295 NG 3296



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL   G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAE 4072

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +   G ++ +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4129

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V+Q+A      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 114/285 (40%), Gaps = 60/285 (21%)

Query: 113  NQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S    V+S G +  G LGHG   + C     I       VV ++A
Sbjct: 4045 KKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDIAA 4103

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--------------- 216
               H+A +  +G +FT G       GH D+   + +P+LVEAL+G               
Sbjct: 4104 GGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQT 4162

Query: 217  -----------------------------VPCK----------QVTAGLNFTGFLTIRGH 237
                                         VP K          +V  G  F+  LT  G 
Sbjct: 4163 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4222

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V+T G   + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G  
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCCTEDGEVYTWGDN 4281

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
                LG G  +   +PR +   + K I+  RV+ G  H +A  +S
Sbjct: 4282 DEGQLGDGTTNAIQRPRLVAALQGKKIN--RVACGSAHTLAWSTS 4324



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 776


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSD-- 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 275
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 453
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R +   +V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQ--KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
           +S +    +V   A N + +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ-KIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 3057 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3114

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3115 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3173

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3174 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3231

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3232 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3291

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3292 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3348

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3349 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3374



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 3027 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3085

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3086 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3145

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3146 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3203

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3204 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3260

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3261 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3306



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4168

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4169 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4227

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4228 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4285

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4345

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4346 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4382



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4096 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4155

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4156 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4214

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4274

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4275 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4331

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4332 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4360



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 522 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 570

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 571 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 630

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 631 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 688

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 689 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 748

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 749 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 805

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 806 DQCQ-HFDTLR 815



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4108 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4166

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4167 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 4225

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4226 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4284

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4285 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4342

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4343 DNDEGQLGDG 4352



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4075

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4076 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4135

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4136 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4195

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4196 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4252

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4253 CKVPMKI 4259



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3123 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3181

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3182 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3240

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3299

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3300 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3357

Query: 358  HG 359
            +G
Sbjct: 3358 NG 3359



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 571 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 626

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 627 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 685

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 686 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 744

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 745 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 802

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 803 GSN--DQCQHFDTLRVTKPEP 821



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3171 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3229

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3230 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3288

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3289 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3347

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3348 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3390



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4220 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4278

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4279 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4337

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4338 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4383



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 4010 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4069

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4070 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4126

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4127 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4153



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 3028 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3084

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3085 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3141

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3142 DDGKLGHFSRMNCDKPRLI 3160


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 137/280 (48%), Gaps = 8/280 (2%)

Query: 205  IFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 262
            I  P ++E L+ +  ++++  +G      LT    V + G    G+LGHGD L   TP+ 
Sbjct: 3843 IVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRK 3902

Query: 263  IAPLEEVGS-VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
            I  L  +G  +V I+ G S+  A+T  G +Y++G G    LGHG+  D L+P+ ++  + 
Sbjct: 3903 IEAL--LGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKS 3960

Query: 322  KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
              +  V   +GD   +A+     V++WG G  G LG G       P  + SL      +V
Sbjct: 3961 YKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKV 4020

Query: 382  CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
                + +  L   G +Y +G   +  LG    G +D V RPR +  L+   +  ++ G  
Sbjct: 4021 ECGSQFSVALTKNGDLYTWGKGDYYRLG---HGTNDHVRRPRKVACLQGKQIVTVAAGSL 4077

Query: 442  HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            H V  TD G +F +GDN+  QLG+ TL    EPT + + E
Sbjct: 4078 HCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTVLE 4117



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 145/289 (50%), Gaps = 17/289 (5%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           P L+++L  +  K++ A +    +L +   G V++ GS   G+LGHGD   R  P+ +  
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDI--RREPELVKE 559

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
           L     + QIA G +Y  AVT NG +Y++G GS   LGHG   D L P  +      G H
Sbjct: 560 LVN-KKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGL--SGSH 616

Query: 326 VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH--LAVQV 381
           VV V+  +GD H +A+D  G V++WG G  G LG G      +P+ + +LK H    V V
Sbjct: 617 VVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNV 676

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
               + +  L   G+V+ +G      LG    G  D V  P++++ L  +H+  I+ G  
Sbjct: 677 LCGSQFSVALGKDGTVWTWGKSDGYRLG---HGTLDHVRYPKMVEGLINYHIVDIAVGPS 733

Query: 442 HTVVVTDRGRLFGFG-DNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
           H + +TD  ++F +G D ++  L  D     +EPT I     E   G+A
Sbjct: 734 HCLALTDNCQIFTWGSDVQKYALSSDNYN--MEPTCISAINKEFIAGVA 780



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 160/340 (47%), Gaps = 9/340 (2%)

Query: 129  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 188
            +S VF  G +  G LG G + ++  S T +   +A   V ++        V   G+V+  
Sbjct: 2868 DSRVFVWGLNDKGQLG-GCKGSKVKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVS 2926

Query: 189  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTH 246
            G+ ++   G  +T   I  P  ++ L     K+VT   G   +  +T  G V + G    
Sbjct: 2927 GEGANGRLGLGNTEN-ISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGID 2985

Query: 247  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            G+LGHGD   R +P  I  LE    +V+IA G S+  AVT +G +Y++G G    LGHG+
Sbjct: 2986 GKLGHGDVTSRLSPTLIEALES-KLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGD 3044

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
                  P+ ++  +   +  +   + D   +AL  +  V++WG G  G LG G      +
Sbjct: 3045 SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNI 3104

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P+ + +L      ++    + +  L  TG V+ +G   +  LG    G       P++++
Sbjct: 3105 PQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLG---HGNDSHYRSPQLIE 3161

Query: 427  -SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              L+   +++I+ G  H + VTD G ++ +GDN+  Q G+
Sbjct: 3162 GPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGN 3201



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 130/286 (45%), Gaps = 20/286 (6%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+  +L SN  VFS G    G LGHG + +   +  +I       +V +S   +H+A +
Sbjct: 3866 GRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSS-ETPRKIEALLGKQIVHISCGSSHSAAI 3924

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-- 237
               G+++T G       GH D +    +P+L+EALK      V  G      L I     
Sbjct: 3925 TSKGELYTWGKGRYGRLGHGDGD-DCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDC 3983

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V + G   +G+LG G +     P  I  L  +G +V ++  G  + +A+T NG +Y++G 
Sbjct: 3984 VWSWGDGDYGKLGRGGSDGCKKPLRIESL--IGMAVCKVECGSQFSVALTKNGDLYTWGK 4041

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
            G  + LGHG      +PR +     +G  +V V+AG  H VA   +G V+TWG    G L
Sbjct: 4042 GDYYRLGHGTNDHVRRPRKVACL--QGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQL 4099

Query: 357  GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            G+G      +PEP           V   +      V  GS + F W
Sbjct: 4100 GNGTL--NPIPEP---------TLVTVLENVKLNRVGCGSAHSFAW 4134



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 115/249 (46%), Gaps = 12/249 (4%)

Query: 234  IRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            I   V   G N  GQLG   G  +  PT  K+IA L  V     IA G   +  VT +G 
Sbjct: 2867 IDSRVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVS----IAGGSKTVFIVTYDGK 2922

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            VY  G G+N  LG G   +   P  + T     +  V V  G  H + +   G V++WG+
Sbjct: 2923 VYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGE 2982

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  G LGHGD   +  P  + +L+S L V++      +  +   G +Y +G   +G LG 
Sbjct: 2983 GIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGH 3042

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTL 468
             D   S  +  P+ + +L+ + V  I+ G     T+ +TD   ++ +GD +  +LG    
Sbjct: 3043 GD---SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGS 3099

Query: 469  RGCLEPTEI 477
             GC  P +I
Sbjct: 3100 EGCNIPQKI 3108



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 8/252 (3%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   +     VFS G  + G LGHG  T++ +S T I    +  +V+++   +H+A V
Sbjct: 2965 GRHSLCITREGKVFSWGEGIDGKLGHGDVTSR-LSPTLIEALESKLIVEIACGSSHSAAV 3023

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 237
               G+++T G       GH D+ + +  P+ V+AL+      +  G     T  LT    
Sbjct: 3024 TADGELYTWGLGDYGRLGHGDS-KTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNC 3082

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V + G    G+LG G +     P+ I  L   G  V +IA G  + LA++  G V+++G 
Sbjct: 3083 VWSWGDGDFGKLGRGGSEGCNIPQKIDAL--CGRDVCRIACGAQFSLALSTTGKVWTWGK 3140

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
            G  + LGHG       P+ I+   +K   +  ++ G  H +A+  +G VY+WG    G  
Sbjct: 3141 GDYYRLGHGNDSHYRSPQLIEGPLKKK-RITEIAVGALHCLAVTDTGEVYSWGDNDHGQQ 3199

Query: 357  GHGDEIDKTLPE 368
            G+G+      P+
Sbjct: 3200 GNGNTTVNKRPQ 3211



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 12/244 (4%)

Query: 239  HTCGSNTHGQLG--HGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            +  G N  GQLG   G  +  P    I A L        +A G   +  +T  G VY+ G
Sbjct: 3773 YVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTA----VAGGEQTLFILTSEGKVYASG 3828

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G +  LG G   + + P  I+  +   I  + V +G  H + L S+  V++WG G  G 
Sbjct: 3829 LGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGK 3888

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHGD++    P  + +L     V +      +  +   G +Y +G   +G LG  D   
Sbjct: 3889 LGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGD--- 3945

Query: 416  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
             D  L+P++L++L+++ V  ++  +G   T+ +TD   ++ +GD +  +LG     GC +
Sbjct: 3946 GDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKK 4005

Query: 474  PTEI 477
            P  I
Sbjct: 4006 PLRI 4009



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 19/238 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 174
           G ++  L S+  V+S GS   G LGHG     PE  + +   +I         Q++    
Sbjct: 522 GEHYLALSSDGCVYSWGSGDGGRLGHGDIRREPELVKELVNKKI--------TQIACGST 573

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           ++A V  +G+++T G  S    GH ++   +  P LV  L G     V  G      L I
Sbjct: 574 YSAAVTSNGELYTWGRGSYGRLGHGNSEDRLL-PTLVAGLSGSHVVDVACGSGDAHTLAI 632

Query: 235 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGVV 291
              G V + G   +G+LG G +     PK +  L+     +V +  G  + +A+  +G V
Sbjct: 633 DKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTV 692

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
           +++G    + LGHG       P+ ++       H+V ++ G  H +AL  +  ++TWG
Sbjct: 693 WTWGKSDGYRLGHGTLDHVRYPKMVEGL--INYHIVDIAVGPSHCLALTDNCQIFTWG 748



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 119  TGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL I++   V+S G    G LG G  +  C    RI       V +V      + 
Sbjct: 3970 SGDAQTLAITDDDCVWSWGDGDYGKLGRGG-SDGCKKPLRIESLIGMAVCKVECGSQFSV 4028

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + ++G ++T G    +  GH  TN  + RPR V  L+G     V AG       T  G 
Sbjct: 4029 ALTKNGDLYTWGKGDYYRLGH-GTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGE 4087

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V T G N  GQLG+G     P P  +  LE V
Sbjct: 4088 VFTWGDNDEGQLGNGTLNPIPEPTLVTVLENV 4119


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4100

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4101 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 4159

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4218

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4219 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4276

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4277 DNDEGQLGDG 4286



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291

Query: 358  HG 359
            +G
Sbjct: 3292 NG 3293



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2996 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3053

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3054 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3112

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3113 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3170

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3171 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3230

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3231 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3287

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3288 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3313



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2966 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3024

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3025 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3084

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3085 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3142

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3143 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3199

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3200 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3245



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4049 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4107

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4108 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4166

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4167 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4224

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4225 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4284

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4285 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4321



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4035 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4094

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4095 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4153

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4154 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4213

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4214 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4270

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4271 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4299



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 459 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 507

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 508 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 567

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 568 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 625

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 626 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 685

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 686 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 742

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 743 DQCQ-HFDTLR 752



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4047 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4105

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4106 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 4164

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4165 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4223

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4224 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4281

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4282 DNDEGQLGDG 4291



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4014

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4015 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4074

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4075 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4134

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4135 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4191

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4192 CKVPMKI 4198



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3062 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3120

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3121 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3179

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3180 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3238

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3239 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3296

Query: 358  HG 359
            +G
Sbjct: 3297 NG 3298



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 508 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 563

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 564 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 622

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 623 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 681

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 682 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 739

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 740 GSN--DQCQHFDTLRVTKPEP 758



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3110 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3168

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3169 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3227

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3228 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3286

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3287 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3329



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4159 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4217

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4218 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4276

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4277 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4322



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3949 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4008

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4009 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4065

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4066 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4092



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2967 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3023

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3024 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3080

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3081 DDGKLGHFSRMNCDKPRLI 3099


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 163/343 (47%), Gaps = 22/343 (6%)

Query: 153  VSFTRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRP 204
            V  ++I  PS      A +VVQV+        V   G+V+ CG+  N     G      P
Sbjct: 2979 VGLSQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVP 3038

Query: 205  IFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 262
            I  PR V AL     K+V   +G      LT+ G V + G    G+LGH   ++   P+ 
Sbjct: 3039 I--PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRL 3096

Query: 263  IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
            I  L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     
Sbjct: 3097 IEALK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL-- 3153

Query: 323  GIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
            G  V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q
Sbjct: 3154 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 3213

Query: 381  VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
            +    + +  L  +G V+ +G   +  LG    G    V +P++++ LR   +  ++ G 
Sbjct: 3214 IECGAQFSLALTKSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGA 3270

Query: 441  YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
             H + VTD G+++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3271 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4048 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIELVDVAAGG 4106

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4107 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4165

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4166 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4223

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4224 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4283

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4284 EGQLG---DGTTNAIQRPRLVPALQGKKVNRVACGSAHTL 4320



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4034 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4093

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  +V +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4094 LRGI-ELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4152

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4153 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4212

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4213 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4269

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4270 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4298



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       +V V+A
Sbjct: 4046 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIELVDVAA 4104

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T
Sbjct: 4105 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQT 4163

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4164 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4222

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4223 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4280

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4281 DNDEGQLGDG 4290



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4013

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4014 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4073

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4074 DGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4133

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4134 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4190

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4191 CKVPMKI 4197



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3118

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3294

Query: 358  HG 359
            +G
Sbjct: 3295 NG 3296



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 500 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 550

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAV-PMLVAGLKGLKVIDV 609

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 668

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 669 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 726

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 727 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3284

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4158 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4216

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4217 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4275

Query: 238  VHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T  + RP    + P  +   V ++A G ++ LA
Sbjct: 4276 VYTWGDNDEGQLGDGTTNAIQRP---RLVPALQGKKVNRVACGSAHTLA 4321



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3948 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4007

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4008 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4064

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4065 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4091


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  E   G   + V  G   T FL   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+    +V ++ G S+ LA+   G V+S+G GS+  LG     + ++ PR I++     
Sbjct: 80  ALD-AQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           + V +V+ G  H +AL   G++++WG+   G LG G      ++P+ L SL+     Q+ 
Sbjct: 137 VQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  +G+V+G+G   FG LG  D   +D+   P +L +LR+  V  IS G  H
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLND--TNDRCF-PALLKALRSQRVIYISCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R   F     V  V     H AF+L+ G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
             GH  + +   +P  V AL       ++ G + T  L  +G V + G  + GQLG  + 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNF 121

Query: 255 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 312
            +    P++I  L +V  V Q+A G  + LA++  G ++S+G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDV-QVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISV 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +Q+   +GI   +++AG  H  AL  SG V+ WG+   G LG  D  D+  P  L +
Sbjct: 181 PQHLQSL--QGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKA 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   + +   +  T  L   G V+ FG  G+G LG      ++  + PR +  L  + 
Sbjct: 239 LRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGNV 295

Query: 433 VSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 464
           V+QI+ G  HT+  T   G++  FG     QLG
Sbjct: 296 VTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 139/293 (47%), Gaps = 9/293 (3%)

Query: 120 GRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           GR HT  L+ + +V++CG +  G LGH     +      ++   A  +V +S  E+H   
Sbjct: 42  GRRHTAFLLEDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQIIVALSCGESHTLA 98

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           +   GQVF+ G  S    G  +    I  PR +++L  V   QV  G   +  L+  GH+
Sbjct: 99  LNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHI 158

Query: 239 HTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            + G N +GQLG G T      P+ +  L+ +    QIAAG ++  A+T +G V+ +G  
Sbjct: 159 FSWGQNRYGQLGLGMTGQSISVPQHLQSLQGI-PFAQIAAGGAHSFALTLSGAVFGWGRN 217

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LG  + +D   P  ++  R +   V+ +S G++H  AL   G V+T+G G  G LG
Sbjct: 218 KFGQLGLNDTNDRCFPALLKALRSQ--RVIYISCGEDHTAALTKEGGVFTFGAGGYGQLG 275

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           H     +  P  +  L  ++  Q+ C R+        +G +  FG  G G LG
Sbjct: 276 HNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 65/150 (43%), Gaps = 4/150 (2%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H+  ++ S +VF  G +  G LG      +C     +    +  V+ +S  E+
Sbjct: 194 QIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFP-ALLKALRSQRVIYISCGED 252

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 233
           H A + + G VFT G       GH  TN  +  PR V  L G    Q+  G   T  F  
Sbjct: 253 HTAALTKEGGVFTFGAGGYGQLGHNSTNHEV-NPRKVFELMGNVVTQIACGRQHTLAFTP 311

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
             G + + G   +GQLG   T +R +P  +
Sbjct: 312 SSGKMDSFGLGGNGQLGTRSTCNRKSPAPV 341


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G E 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2994 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3051

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3052 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3110

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3111 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3168

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3169 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3228

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3229 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3285

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3286 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3311



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 3082

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3197

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3198 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3245



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 181/405 (44%), Gaps = 25/405 (6%)

Query: 74   MSRNVQIELLNRCNGNWKRVL--RFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS 131
            M+ N  +++L+ C+  +KR    + +Q +    D    SAG                + +
Sbjct: 3914 MADNENMDVLHECHDVFKREQDEQLVQWMNRRPDDWTLSAGG---------------SGT 3958

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
            ++  G +  G LG G E  +    T     +    VQ+   E     V   G+++  G  
Sbjct: 3959 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 4017

Query: 192  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +    G   T   +  P L+E+++ V  K+V   +G      L+  G V++ G    G+L
Sbjct: 4018 AGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4076

Query: 250  GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
            GHG+      P+ I  L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D
Sbjct: 4077 GHGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4135

Query: 310  ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
            +L+P+ ++  +   +  +   +GD   + L     V++WG G  G LG G      +P  
Sbjct: 4136 QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMK 4195

Query: 370  LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
            + SL     V+V    + +  L  +G+VY +G   +  LG    G  D V RPR +  L+
Sbjct: 4196 IDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQ 4252

Query: 430  AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
               V  I+TG  H V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4253 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4105

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4106 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4164

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G  VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLG--VVKVECGSQFSVALTKSGA 4222

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VVQ++ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQ----AGKHVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRITKPEP 753



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +   G ++ +G   +G LG   
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4129

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3060 GRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3118

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3119 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3294

Query: 358  HG 359
            +G
Sbjct: 3295 NG 3296



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           VVQIA      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 115/285 (40%), Gaps = 60/285 (21%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDIAA 4103

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--------------- 216
               H+A +  +G +FT G       GH D+   + +P+LVEAL+G               
Sbjct: 4104 GGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQT 4162

Query: 217  -----------------------------VPCK----------QVTAGLNFTGFLTIRGH 237
                                         VP K          +V  G  F+  LT  G 
Sbjct: 4163 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGA 4222

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V+T G   + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G  
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCCTEDGEVYTWGDN 4281

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
                LG G  +   +PR +   + K I+  RV+ G  H +A  +S
Sbjct: 4282 DEGQLGDGTTNAIQRPRLVAALQGKKIN--RVACGSAHTLAWSTS 4324



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3108 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3166

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3167 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3284

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3327



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 672 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 357
            F     E+ D+ +       R+K       +AG E    + +   V+ WG      LG  
Sbjct: 2929 FLASDNEEEDDDKANTGSLVRKK-------AAGLESAATIRTK--VFVWGLNDKDQLGGL 2979

Query: 358  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2980 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 3033

Query: 417  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 3034 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 3093

Query: 474  PTEI 477
            P  I
Sbjct: 3094 PRLI 3097


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2934 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 2991

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2992 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3050

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3051 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3108

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3109 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3168

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3169 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3225

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3226 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3251



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2962

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2963 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3022

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3023 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3080

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3081 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3137

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3138 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3183



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3987 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4045

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4046 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4104

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4105 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4162

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4163 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4222

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4223 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4259



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3973 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4032

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4033 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4091

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4092 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4151

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4152 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4208

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4209 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4237



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 399 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 447

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 565

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 566 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 625

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 626 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 683 DQCQ-HFDTLR 692



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 3985 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4043

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4044 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 4102

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4103 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4161

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4162 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4219

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4220 DNDEGQLGDG 4229



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3952

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3953 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4012

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4013 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4072

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4073 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4129

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4130 CKVPMKI 4136



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3000 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3058

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3059 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3117

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3118 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3176

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3177 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3234

Query: 358  HG 359
            +G
Sbjct: 3235 NG 3236



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 503

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 504 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 562

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 563 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 621

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 622 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 679

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 680 GSN--DQCQHFDTLRVTKPEP 698



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3048 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3106

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3107 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3165

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3166 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3224

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3225 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3267



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4097 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4155

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4156 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4214

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4215 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4260



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3887 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3946

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3947 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4030



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2905 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 2961

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2962 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3018

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3019 DDGKLGHFSRMNCDKPRLI 3037


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2742 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 2799

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2800 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2858

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2859 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2916

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2917 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2976

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2977 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3033

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3034 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3059



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 2830

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 2888

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2889 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2945

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 2946 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 2993



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 140/280 (50%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 3796 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 3854

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 3855 AHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 3913

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3914 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3971

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3972 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4031

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4032 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4068



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3782 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3841

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 3842 LRGI-EVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 3900

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3901 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3960

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3961 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4017

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4018 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4046



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A
Sbjct: 3794 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDIAA 3852

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A +  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 3853 GGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQT 3911

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 3912 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 3970

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 3971 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4028

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4029 DNDEGQLGDG 4038



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  +    Q+  G   + AVT +G +Y
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPI----QLIGGEQTLFAVTADGKLY 3761

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3762 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3821

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG   
Sbjct: 3822 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLG--- 3878

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3879 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3938

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 3939 CKVPMKI 3945



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2808 GRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 2866

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2985 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3042

Query: 358  HG 359
            +G
Sbjct: 3043 NG 3044



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2856 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2914

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2915 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2973

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2974 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3032

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3075



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 9/121 (7%)

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V+S+G G    LG G       P+ I+    + + VV+V  G +  VAL   G VY+W
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRCGSQFSVALTKDGQVYSW 466

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR-------KTFVLVDTGSVYGFG 401
           GKG    LGHG E     P+ L  L++ L    C  K+       K  V +  G    F 
Sbjct: 467 GKGDNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACGPAQSFA 526

Query: 402 W 402
           W
Sbjct: 527 W 527



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 1/87 (1%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           F  I G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G 
Sbjct: 404 FSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKDGQ 462

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           VYS+G G N  LGHG +     P+ ++
Sbjct: 463 VYSWGKGDNQRLGHGTEEHVRYPKLLE 489



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3906 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3964

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3965 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4023

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4024 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4069



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   +Q+   ++  F + 
Sbjct: 3696 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVT 3755

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3756 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3812

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3813 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3839



 Score = 45.8 bits (107), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 357
            F     E+ D+ +       R+K       ++G E    + +   V+ WG      LG  
Sbjct: 2677 FLASDNEEEDDEKANTGSLIRKK-------ASGLESAATIRTK--VFVWGLNDKDQLGGL 2727

Query: 358  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2728 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 2781

Query: 417  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 2782 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 2841

Query: 474  PTEI 477
            P  I
Sbjct: 2842 PRLI 2845



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   +V +T  G+++ 
Sbjct: 409 GQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYS 465

Query: 455 FGDNERAQLGHDT 467
           +G  +  +LGH T
Sbjct: 466 WGKGDNQRLGHGT 478



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           A F L  GQV++ GD      G R  +     P+L+E L+ +   +V  G  F+  LT  
Sbjct: 402 AVFSLIFGQVWSWGDGDYGKLG-RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKD 460

Query: 236 GHVHTCGSNTHGQLGHG 252
           G V++ G   + +LGHG
Sbjct: 461 GQVYSWGKGDNQRLGHG 477


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 136/269 (50%), Gaps = 6/269 (2%)

Query: 208 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           P L+E+++ V  K+V  ++G      L+  GHV++ G    G+LGHG+ +    PK I  
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIED 62

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
           L  V  +V IA G  +  A+T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 63  LLGV-EIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI 121

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            V   +GD   + +     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 122 DVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGS 181

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
           + +  L  +G+VY +G   +  LG    G  D V RPR + +L+   +  I+TG  H V 
Sbjct: 182 QFSVALTRSGAVYTWGKGDYHRLG---HGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 238

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +D+G +F +GDN+  QLG  T      P
Sbjct: 239 CSDKGEVFTWGDNDEGQLGDGTTSALHRP 267



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 9/280 (3%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
           V VS+   H   +   G V++ G+      GH   N+  + RP+L+E L GV    +  G
Sbjct: 17  VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH--GNKVSYDRPKLIEDLLGVEIVDIACG 74

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
            + +  +T  G ++T G   +G+LGHGD+ D+  PK +  L++   + V   +G +  L 
Sbjct: 75  GHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLC 134

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 135 VTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSL--AGLGVVKVECGSQFSVALTRSGA 192

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VYTWGKG    LGHG +     P  +++L+    + +           D G V+ +G   
Sbjct: 193 VYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDND 252

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
            G LG    G +  + RPR++ +L+   +++++ G  HT+
Sbjct: 253 EGQLG---DGTTSALHRPRLVHALQGKKITRVACGSAHTL 289



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 14/253 (5%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
            ++ +++G  H + +S+   V+S G    G LGHG +    VS+ R   I       +V 
Sbjct: 15  KKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNK----VSYDRPKLIEDLLGVEIVD 70

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           ++   +H+A +  +G ++T G       GH D++  + RP++VEAL+      V  G   
Sbjct: 71  IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL-RPKVVEALQDYKVIDVACGSGD 129

Query: 229 TGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
              L  T   +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T
Sbjct: 130 AQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLG-VVKVECGSQFSVALT 188

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G VY++G G    LGHG      +PR +     +G  ++ ++ G  H VA    G V+
Sbjct: 189 RSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAAL--QGKKIISIATGSLHCVACSDKGEVF 246

Query: 347 TWGKGYCGALGHG 359
           TWG    G LG G
Sbjct: 247 TWGDNDEGQLGDG 259


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 275
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 453
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
           +S +    +V   A N + +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 143/311 (45%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 275
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 453
           G V+ FG  G+G LG      +   + PR +  L    V+Q + G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q  C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 130/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
           +S +    +V   A N + +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V + + G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQAACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V Q A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 159/333 (47%), Gaps = 23/333 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G+VF  GD S    GH   +  +  P+LVEAL     + V  G
Sbjct: 309 VHHIACGNRHAALVTKQGEVFCWGDESGGRLGH-GVDVDVAHPKLVEALATTNTEFVACG 367

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
              +  +T+ G + T G  TH  G LGHG+ +   TPK +  PLE +  V  +A G  + 
Sbjct: 368 EYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEGI-RVSSVACGVWHT 426

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT  G +++FG G+   LGHG++     P+ +++   KG+  VRV+ G  H  A+   
Sbjct: 427 ALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESL--KGLKTVRVACGVWHTAAVVEV 484

Query: 340 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                    SSG ++TWG G  G LGHGD+  K +P  +++L  +   QV      T  L
Sbjct: 485 MVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVAL 544

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
              G V+  G   +G LG      +D  L   +   L    V +I+ G YH  V+T +  
Sbjct: 545 TINGRVFTMGSSLYGQLG---DVRADGKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTE 601

Query: 452 LFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           ++ +G     +LGH  +     PT   ++ ++E
Sbjct: 602 VYTWGKGANGRLGHGDVMDRNTPT--LVEALKE 632



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 134/294 (45%), Gaps = 28/294 (9%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 156
           V H   +   +  N   +  G YH+  ++ S     +  G+   G+LGHG + +      
Sbjct: 347 VAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTP-K 405

Query: 157 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R+  P     V  V+    H A V  +GQ+FT GD +    GH D  R +  P+ VE+LK
Sbjct: 406 RVGGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGD-KRSVALPKEVESLK 464

Query: 216 GVPCKQVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           G+   +V  G+  T  +              G + T G    G+LGHGD   +  P  +A
Sbjct: 465 GLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVA 524

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH----GEQHDELQPRAIQTFR 320
            L +  +  Q+A G +  +A+T NG V++ GS     LG     G+    ++ R  + F 
Sbjct: 525 ALVDY-NFKQVACGHTLTVALTINGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAF- 582

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
                V  ++ G  HV  L +   VYTWGKG  G LGHGD +D+  P  + +LK
Sbjct: 583 -----VEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALK 631



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 138/294 (46%), Gaps = 24/294 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +    +  G      +T +G V   G  + G+LGHG  +D   PK +  L 
Sbjct: 298 PKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKLVEALA 357

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF--CLGHGEQHDELQPRAIQTFRRKGIH 325
              +   +A G  +  AVT +G ++++G G++    LGHG       P+ +     +GI 
Sbjct: 358 TTNTEF-VACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGG-PLEGIR 415

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  V+ G  H   + S+G ++T+G G  G LGHGD+    LP+ + SLK    V+V    
Sbjct: 416 VSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRVACGV 475

Query: 386 RKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
             T  +V+           +G ++ +G    G LG  D+   ++ L P  + +L  ++  
Sbjct: 476 WHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDK---EQKLVPTCVAALVDYNFK 532

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLG----HDTLRGCLEPT--EIFIQEM 482
           Q++ G   TV +T  GR+F  G +   QLG       L G +E    E F++E+
Sbjct: 533 QVACGHTLTVALTINGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAFVEEI 586



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G +HT L++++  +F+ G    GVLGHG + +  +    +        V+V+    H
Sbjct: 419 VACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALP-KEVESLKGLKTVRVACGVWH 477

Query: 176 AAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            A V++           SG++FT GD      GH D  + +  P  V AL     KQV  
Sbjct: 478 TAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLV-PTCVAALVDYNFKQVAC 536

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   T  LTI G V T GS+ +GQLG     D   P  +        V +IA G  ++  
Sbjct: 537 GHTLTVALTINGRVFTMGSSLYGQLGDVRA-DGKLPGLVEGRLWEAFVEEIACGAYHVAV 595

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
           +T    VY++G G+N  LGHG+  D   P  ++  + K +  V   +G
Sbjct: 596 LTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSG 643



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 9/186 (4%)

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           S GSG       G + D L P+A+++     +H   ++ G+ H   +   G V+ WG   
Sbjct: 283 SVGSGDG-----GIKTDSLLPKALESAVVLDVH--HIACGNRHAALVTKQGEVFCWGDES 335

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHG ++D   P+ + +L +     V   +  +  +  +G ++ +G  G  S G   
Sbjct: 336 GGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWG-DGTHSYGLLG 394

Query: 413 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
            G       P R+   L    VS ++ G++HT +VT  G+LF FGD     LGH   R  
Sbjct: 395 HGNDISHWTPKRVGGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSV 454

Query: 472 LEPTEI 477
             P E+
Sbjct: 455 ALPKEV 460



 Score = 38.9 bits (89), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 36/73 (49%)

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
           + G   G  ++   S+G  D G+    L P+ L+S     V  I+ G  H  +VT +G +
Sbjct: 269 EEGDALGDVFLWGESVGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEV 328

Query: 453 FGFGDNERAQLGH 465
           F +GD    +LGH
Sbjct: 329 FCWGDESGGRLGH 341


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 275
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 453
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
           +S +    +V   A N + +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL  
Sbjct: 27  RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 275
                V  G   T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+
Sbjct: 84  QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 453
           G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
           +S +    +V   A N + +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G E  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G E   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G    + T P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G E 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3048

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3282

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3079

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3137

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3242



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 150/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           + Q++ +E     + ++G+V+    NS       DT      P+LV+ L      ++ A 
Sbjct: 454 ITQIACAEKRFLILSRNGRVYMQAYNS-------DT----LGPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSVALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  VV V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVVDVAAGSTHCLALTEDSEVHSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRITKPEP 753



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3115

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3291

Query: 358  HG 359
            +G
Sbjct: 3292 NG 3293



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 33/237 (13%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP----KSIAPLEEVG------------------- 270
            G ++  G N  GQLG   G  +  PTP     ++ P++ +G                   
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014

Query: 271  -SVVQIA--AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
              V+ IA  +G +  L +T +  V+S+G G    LG G       P  I +    G+ VV
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVV 4072

Query: 328  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            +V  G +  VAL  SG VYTWGKG    LGHG +     P  +  L+    + +      
Sbjct: 4073 KVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4132

Query: 388  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
                 + G VY +G    G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4133 CVCCTEDGEVYTWGDNDEGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4186



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           + QIA      L ++ NG VY     S          D L P+ +Q    + I  +   +
Sbjct: 454 ITQIACAEKRFLILSRNGRVYMQAYNS----------DTLGPQLVQGLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3281

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4082

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4083 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4141

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4142 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4187



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRITKPEPTALPGL-DTKHIVGIACGPAQSFA 776



 Score = 44.7 bits (104), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L  + V +++  +G  H + +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG 3075

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2970 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSNYVV 3027

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G + + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3028 KKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3086

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3087 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3144

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3145 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3204

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3205 VVWTWGKGDYFRLG---HGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAW 3261

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3262 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3287



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2940 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2998

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  + +A+T +G ++S+G G +  
Sbjct: 2999 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 3058

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3059 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3116

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3117 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3173

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T
Sbjct: 3174 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGT 3221



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 181/405 (44%), Gaps = 25/405 (6%)

Query: 74   MSRNVQIELLNRCNGNWKRVL--RFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS 131
            M+ N  +++L+ C+  +KR    + +Q +    D    SAG                + +
Sbjct: 3890 MADNEHMDVLHECHDVFKREQDEQLVQWMNRRPDDWTLSAGG---------------SGT 3934

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
            ++  G +  G LG G E  +    T     +    VQ+   E     V   G+++  G  
Sbjct: 3935 IYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYG 3993

Query: 192  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +    G   T   +  P L+E+++ V  K+V   +G      L+  G V++ G    G+L
Sbjct: 3994 AGGRLGIGGTES-VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKL 4052

Query: 250  GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
            GHG+      P+ I  L  +  VV IAAG ++   +T  G ++++G G    LGHG+  D
Sbjct: 4053 GHGNRSPCDRPRVIESLRGI-EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSED 4111

Query: 310  ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
            +L+P+ ++  +   +  +   +GD   + L     V++WG G  G LG G      +P  
Sbjct: 4112 QLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMK 4171

Query: 370  LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
            + SL     V+V    + +  L  +G+VY +G   +  LG    G  D V RPR +  L+
Sbjct: 4172 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQ 4228

Query: 430  AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
               V  I+TG  H V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4229 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4273



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    + AG 
Sbjct: 4023 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDIAAGG 4081

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G + T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4082 AHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4140

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4141 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4198

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4199 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4258

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4259 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4295



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VVQ++ +E     + ++G+V+T   NS       DT      P+LV++L      ++ A 
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQAYNS-------DT----LGPQLVQSLASRNIVKIAAH 478

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 479 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 538

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 596

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 656

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 657 TWGKGDNQRLG---HGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 713

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 714 DQCQ-HFDTLR 723



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +N  VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 479 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQ----AGKHVVHIA 534

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 535 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 593

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 594 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 652

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY++G G N  LGHG +     P+ ++    KG  V+ V+AG  H +AL     V++W
Sbjct: 653 GQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL--KGKKVIDVAAGSTHCLALTEDSEVHSW 710

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 711 GSN--DQCQHFDTLRITKPEP 729



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 113/242 (46%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  +FS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3036 GRHAMALTVDGKIFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3094

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3095 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3153

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3154 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3212

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3213 DYFRLGHGTDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQG 3270

Query: 358  HG 359
            +G
Sbjct: 3271 NG 3272



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3988

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3989 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4048

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +   G ++ +G   +G LG   
Sbjct: 4049 DGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLG--- 4105

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4106 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4165

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4166 CKVPMKI 4172



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           VVQIA      L ++ NG VY+    S          D L P+ +Q+   + I  +   +
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQAYNS----------DTLGPQLVQSLASRNIVKIAAHS 479

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 480 DGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTY 539

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 540 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 596

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 633



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 115/285 (40%), Gaps = 60/285 (21%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A
Sbjct: 4021 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDIAA 4079

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--------------- 216
               H+A +  +G +FT G       GH D+   + +P+LVEAL+G               
Sbjct: 4080 GGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQT 4138

Query: 217  -----------------------------VPCK----------QVTAGLNFTGFLTIRGH 237
                                         VP K          +V  G  F+  LT  G 
Sbjct: 4139 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4198

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V+T G   + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G  
Sbjct: 4199 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCCTEDGEVYTWGDN 4257

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
                LG G  +   +PR +   + K I+  RV+ G  H +A  +S
Sbjct: 4258 DEGQLGDGTTNAIQRPRLVAALQGKKIN--RVACGSAHTLAWSTS 4300



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3084 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3142

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3143 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3201

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3202 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDTGQVYA 3260

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3261 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3303



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 647

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV+T G   +   GH  T   +  P+L+E LKG     V AG      LT    
Sbjct: 648 ALTKDGQVYTWGKGDNQRLGH-GTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSE 706

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 707 VHSWGSNDQCQ--HFDTLRITKPEPAALPGL-DTKHIVGIACGPAQSFA 752



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 357
            F     E+ D+ +       R+K       +AG E    + +   V+ WG      LG  
Sbjct: 2905 FLASDNEEEDDDKANTGSLVRKK-------AAGLESAATIRTK--VFVWGLNDKDQLGGL 2955

Query: 358  HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
             G +I   +  E LS+L     VQV    +  F +   G VY  G    G LG    G+S
Sbjct: 2956 KGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GIS 3009

Query: 417  D-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
               V  PR + +L  + V +++  +G  H + +T  G++F +G+ +  +LGH +   C +
Sbjct: 3010 SGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDK 3069

Query: 474  PTEI 477
            P  I
Sbjct: 3070 PRLI 3073


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2992 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3049

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3050 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3108

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3109 GSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3166

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3167 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3226

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3227 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3283

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3284 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3309



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2962 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3020

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3021 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3080

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3081 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3138

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3139 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3195

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3196 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3241



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G+    V AG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGIEVVDVAAGG 4104

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4163

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4164 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4221

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4282 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 147/315 (46%), Gaps = 7/315 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3987 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESVQHVFIKK 4045

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      L+  G V++ G    G+LGHG+      P+ +  L  +  VV +AAG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGI-EVVDVAAGG 4104

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  +   +GD   + L
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4164

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4165 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4224

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  T+ G ++ +GDN+
Sbjct: 4225 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281

Query: 460  RAQLGHDTLRGCLEP 474
              QLG  T      P
Sbjct: 4282 EGQLGDGTTNAIQRP 4296



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 150/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + +SG+V+T   NS               P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQAYNSD-----------ALAPQLVQGLASRNIIKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE+ P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 126/266 (47%), Gaps = 13/266 (4%)

Query: 96   FLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 155
             L+SV+H    ++  A N    + G++   L S   V+S G +  G LGHG   + C   
Sbjct: 4034 LLESVQHV--FIKKVAVN----SGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRP 4086

Query: 156  TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
              +       VV V+A   H+A V  +G ++T G       GH D+   + +P+LVEAL+
Sbjct: 4087 RVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQ 4145

Query: 216  GVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
            G     +   +G   T  LT    V + G   +G+LG G +     P  I  L  +G VV
Sbjct: 4146 GHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VV 4204

Query: 274  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            ++  G  + +A+T +G VY++G G    LGHG      +PR +Q    +G  V+ ++ G 
Sbjct: 4205 KVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGS 4262

Query: 334  EHVVALDSSGYVYTWGKGYCGALGHG 359
             H V     G VYTWG    G LG G
Sbjct: 4263 LHCVCCTEDGEVYTWGDNDEGQLGDG 4288



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4011

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4012 ATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4071

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4072 DGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4131

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4132 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4188

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4189 CKVPMKI 4195



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3058 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3116

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3117 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3175

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3176 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3234

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3235 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3292

Query: 358  HG 359
            +G
Sbjct: 3293 NG 3294



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +   +  P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVI-PVLVAGLKGLKVIDVACGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ +G VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRSGRVYTQAYNS----------DALAPQLVQGLASRNIIKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+  + P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4156 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4214

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4273

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4274 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4319



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 5/144 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3946 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4005

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4006 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEG 4062

Query: 451  RLFGFGDNERAQLGHDTLRGCLEP 474
             ++ +G+ E  +LGH     C  P
Sbjct: 4063 EVYSWGEAEDGKLGHGNRSPCDRP 4086



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2963 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3019

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3020 EATNGRLGL---GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3076

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3077 DDGKLGHFSRMNCDKPRLI 3095


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 160/360 (44%), Gaps = 36/360 (10%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 188
           +  V+SCG +  G LGHG +T    SF RI       ++Q+ A   H   +   G+V TC
Sbjct: 432 DREVWSCGQNSYGELGHG-DTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTC 490

Query: 189 GDNSSFCCGHRDTNRPIFRPRLVEALKGVP------CKQVTA--GLNFTGFLTIRGHVHT 240
           G N +  CG   T R       V  L  +P        QV A  G   T  +T+ G   T
Sbjct: 491 GYNDNGQCGQGGTAR-------VSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAAT 543

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------TGNGVVYSF 294
           CG N  GQLGHG+T     PK +  LE    +V++ +   Y   +      +G   +Y+F
Sbjct: 544 CGYNYRGQLGHGNTASESVPKIVRSLE--NRIVRLVSCSYYHTVMACEEDGSGQQYLYTF 601

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      LGH +  D   P+ ++    +  HVV V+ G  H + + ++G  + +GK   G
Sbjct: 602 GRNDYGQLGHNDSIDRKVPQHVEAMGDQ--HVVSVACGQYHTMVVTATGKAFAFGKNDYG 659

Query: 355 ALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LG     ++ +P  + + L+ H  +++      T VL     ++ FG   +G LG    
Sbjct: 660 QLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRA 719

Query: 414 GVS---------DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             S          +    R+++ L    + + + G YHTV V+D G ++ FG N   QLG
Sbjct: 720 NASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLG 779



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 9/246 (3%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V +CG N++G+LGHGDT  R + + I  L++   ++QI AG  + +A+T +G V + G 
Sbjct: 434 EVWSCGQNSYGELGHGDTASRKSFERIESLQQ-KEIIQIGAGNEHTIALTVDGKVLTCGY 492

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             N   G G          +       I  V    G EH + +   G   T G  Y G L
Sbjct: 493 NDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQL 552

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGS----VYGFGWMGFGSLGFP 411
           GHG+   +++P+ + SL++ +   V C+         + GS    +Y FG   +G LG  
Sbjct: 553 GHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHN 612

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
           D  +  KV  P+ ++++   HV  ++ G YHT+VVT  G+ F FG N+  QLG D++   
Sbjct: 613 D-SIDRKV--PQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQ 669

Query: 472 LEPTEI 477
           L P ++
Sbjct: 670 LVPVQV 675



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 151/355 (42%), Gaps = 31/355 (8%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 171
           +QI  G  HT+ L  +  V +CG +  G  G G     +      ++   + + V   + 
Sbjct: 469 IQIGAGNEHTIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNG 528

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            E H   V   G+  TCG N     GH +T      P++V +L+    + V+     T  
Sbjct: 529 CE-HTILVTMDGRAATCGYNYRGQLGHGNTASESV-PKIVRSLENRIVRLVSCSYYHTVM 586

Query: 232 L-----TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLA 284
                 + + +++T G N +GQLGH D++DR  P+ +   E +G   VV +A G  + + 
Sbjct: 587 ACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHV---EAMGDQHVVSVACGQYHTMV 643

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT  G  ++FG      LG     ++L P  ++    K    + +  G  H + L S  +
Sbjct: 644 VTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKH-ECLEIRCGYYHTIVLCSGAH 702

Query: 345 VYTWGKGYCGALGHG------------DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           ++ +G+   G LG G             +   +    +  L+    V+       T  + 
Sbjct: 703 LFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVS 762

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           D G +Y FG    G LG  D   +++ + P  +D      V+ ++ G YHTVV+T
Sbjct: 763 DNGVMYVFGRNNHGQLGTGD---TNERVYPFPIDDFVGKRVALVAAGFYHTVVLT 814



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 127/300 (42%), Gaps = 22/300 (7%)

Query: 110 SAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 168
           +A +Q+    G  HT+L++ +    +CG +  G LGHG   T   S  +I       +V+
Sbjct: 518 NAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQLGHG--NTASESVPKIVRSLENRIVR 575

Query: 169 -VSASENHAAFVLQ---SGQ--VFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQ 221
            VS S  H     +   SGQ  ++T G N     GH D+ +R +  P+ VEA+       
Sbjct: 576 LVSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKV--PQHVEAMGDQHVVS 633

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           V  G   T  +T  G     G N +GQLG     ++  P  +    E    ++I  G  +
Sbjct: 634 VACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYH 693

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHD------ELQPRAIQTFRR----KGIHVVRVSA 331
            + +     +++FG      LG G  +       +LQ +     R     +G  +VR + 
Sbjct: 694 TIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFAC 753

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           G  H VA+  +G +Y +G+   G LG GD  ++  P P+          V A    T VL
Sbjct: 754 GCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAGFYHTVVL 813


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 31  VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 88

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V +A G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 89  ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 145

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 146 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 205

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 206 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 262

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 263 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 298



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 155/338 (45%), Gaps = 13/338 (3%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           S+   G++  G LG G    + V    R +F     V  V     H  FVL  G V+TCG
Sbjct: 9   SMLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 68

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            N     GH  + +   +P  V AL       V  G   T  L  +G V+  G ++ GQL
Sbjct: 69  CNDLGQLGHEKSRK---KPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 125

Query: 250 G-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQ 307
           G  G       P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G + 
Sbjct: 126 GLQGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 184

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             +  P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P
Sbjct: 185 QKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVP 242

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
             L SL+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  
Sbjct: 243 NLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFE 299

Query: 428 LRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           L    V+Q++ G  HT   V   GR++ FG     QLG
Sbjct: 300 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 337



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V V+  E H   + 
Sbjct: 53  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 109

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G + +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 110 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 169

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 170 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 228

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 229 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 286

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 287 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 337



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
           +S +    +V   A N + +  G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 79  KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 136

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 137 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 196

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 197 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 255

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +
Sbjct: 256 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 313

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 314 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 347



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 131 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 184

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 185 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 243

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 244 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 301

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 302 GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 351


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 156/303 (51%), Gaps = 12/303 (3%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHESEGS---KPEPIGALAGQHIVHVAC 91

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 283
           G + +  L+ +G V + G+ + GQLG     D  T P+ I  L +  +++QI+ G  + L
Sbjct: 92  GESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQISCGNWHCL 150

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 461
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 462 QLG 464
           QLG
Sbjct: 326 QLG 328



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 143/296 (48%), Gaps = 19/296 (6%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         I  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
           T GQLGH     +P P      + +   V +A G S+ +A++  G V+S+G+GS+  LG 
Sbjct: 62  TKGQLGHESEGSKPEPIGALAGQHI---VHVACGESHSVALSDQGQVFSWGAGSDGQLGL 118

Query: 305 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI- 362
               D +  PR I+   ++ I  +++S G+ H +AL + G  +TWG+   G LG G E  
Sbjct: 119 TTIEDAVTVPRLIKKLNQQTI--LQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP 176

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            +  P+ + SL      QV A    +F L  +G+V+G+G    G LG  D    +    P
Sbjct: 177 SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRES---P 233

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
             +  LR+  V  IS G  HT V+T  G +F FG     QLGHD++   + P  + 
Sbjct: 234 CHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 289



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 15/310 (4%)

Query: 102 HSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           H  ++ E + G       G +   L+ +  V++CG +  G LGH  E ++      I   
Sbjct: 32  HDRNVKEVACG-------GNHSVFLLEDGEVYTCGLNTKGQLGHESEGSKP---EPIGAL 81

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
           +  H+V V+  E+H+  +   GQVF+ G  S    G       +  PRL++ L      Q
Sbjct: 82  AGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ 141

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           ++ G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG +
Sbjct: 142 ISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGA 200

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           +  A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L 
Sbjct: 201 HSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLT 258

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYG 399
            SG V+T+G G CG LGH    D+  P  +  L      Q+ C R      +  +G +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYA 318

Query: 400 FGWMGFGSLG 409
           FG    G LG
Sbjct: 319 FGCGTRGQLG 328



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H++ +S+   VFS G+   G LG             I   +   ++Q+S   
Sbjct: 87  VHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN 146

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 352
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLA 378
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSH---LAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           WG    G  G G  +   +PEP      H   +    C      F+L D G VY  G   
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG    G      +P  + +L   H+  ++ G  H+V ++D+G++F +G     QLG
Sbjct: 63  KGQLGHESEGS-----KPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLG 117

Query: 465 HDTLRGCLEPTEIFIQEMEEDTGL 488
             T+   +    + I+++ + T L
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQTIL 140


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 166/349 (47%), Gaps = 17/349 (4%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +F  GS++ G LG G    + +   R ++F  A  V Q++  EN+   +   GQV++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N     GH    +   R +L+  L     K++  G   T  +   G + + G N  GQLG
Sbjct: 61  NDYGQLGHEKARK---RLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLG 117

Query: 251 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
               D  +R TP+ +  L     +VQIA G  + +A+T +G +YS+GS     LG G   
Sbjct: 118 LNSVDCTER-TPRMVKAL-GTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHT 175

Query: 309 -DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             E++P+ I T     + +  ++ G  H V +  SG V+ WG+   G LG  D   + +P
Sbjct: 176 VTEIKPKRIITL--AAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIVP 233

Query: 368 EPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
             L +L+ + +    C  +   F+ +D G V+  G   +G LG    G     + PR + 
Sbjct: 234 CQLRTLRNAKVCYAACGEEFSVFLTLD-GGVFTCGAGMYGQLG---HGNGMNEILPRQVM 289

Query: 427 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L    V+QIS G  HT+ +V  RGR++ +G     QLG+   R    P
Sbjct: 290 ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTP 338



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 147/307 (47%), Gaps = 10/307 (3%)

Query: 107 VETSAGNQM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V+ +  N++ QI  G  +T+ I+N   V+SCG++  G LGH     +      ++   A 
Sbjct: 28  VDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARKRLQLIPGLD---AF 84

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
              +++    H   V + GQ+F+ G N     G    +     PR+V+AL      Q+  
Sbjct: 85  VFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIAC 144

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
           G+  +  LT  G +++ GSN  GQLG G  T+    PK I  L  V  +  IA G  + +
Sbjct: 145 GIEHSIALTNDGELYSWGSNREGQLGIGSHTVTEIKPKRIITLAAV-PIAFIACGGYHTV 203

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            ++ +GVV+++G  +   LG  +    + P  ++T R     V   + G+E  V L   G
Sbjct: 204 VISKSGVVFAWGRNTFGQLGLNDTQQRIVPCQLRTLRNA--KVCYAACGEEFSVFLTLDG 261

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGW 402
            V+T G G  G LGHG+ +++ LP  +  L      Q+   KR T  LV + G VY +G 
Sbjct: 262 GVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGL 321

Query: 403 MGFGSLG 409
            G G LG
Sbjct: 322 GGAGQLG 328



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 12/240 (5%)

Query: 242 GSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           GS  HG+LG G   D     P+ +    +   V QIA G +Y + +T +G VYS G+   
Sbjct: 5   GSTIHGELGLGGIEDENIFMPRQV-DFAKANEVEQIACGENYTVTITNDGQVYSCGNNDY 63

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG- 357
             LGH +    LQ    +  F  K     +++ G  H +A++  G +++WG    G LG 
Sbjct: 64  GQLGHEKARKRLQLIPGLDAFVFK-----KIACGSCHTLAVNEWGQLFSWGCNMKGQLGL 118

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           +  +  +  P  + +L + + VQ+      +  L + G +Y +G    G LG     V++
Sbjct: 119 NSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTVTE 178

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++P+ + +L A  ++ I+ G YHTVV++  G +F +G N   QLG +  +  + P ++
Sbjct: 179 --IKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRIVPCQL 236


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 162/359 (45%), Gaps = 24/359 (6%)

Query: 130 SSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS 182
           SS+++ G S  G  G G       PE  Q +            VV  +    ++AFV + 
Sbjct: 37  SSLYTWGRSDLGQTGSGRDQNSTAPEPVQALQ--------GKDVVHAAGGSYNSAFVTRD 88

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           G+++T G N +   G +        P  V AL+      V  G      +   GH+   G
Sbjct: 89  GELYTTGSNDARQLGVKG-REVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWG 147

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
           SN +GQLG G+         +          ++AAG ++ LA+T +G VYSFG GS   L
Sbjct: 148 SNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGAL 207

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           GHG+ ++  +P  +Q    + I  V ++AG+    A+  SG V+TWG+   G LG+G+  
Sbjct: 208 GHGDVNNRAKPTLVQALWPEAI--VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFG 265

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----FPDRGVSDK 418
           +  LP+P+  ++   AVQV         L   G VY +G    G LG         ++  
Sbjct: 266 NAFLPQPVPGIEQ--AVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGC 323

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +  P  +DSL    + Q+S G  H+  V+   +L+G G N+  QL   ++     PT +
Sbjct: 324 LCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQLALQSVPSVALPTRV 382



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 16/300 (5%)

Query: 120 GRYHTLLIS-NSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           G Y++  ++ +  +++ GS+    LG  G E    +   R++     +V  V+  + H  
Sbjct: 78  GSYNSAFVTRDGELYTTGSNDARQLGVKGREV--ALEPIRVSALEMNNVHGVACGQGHML 135

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            V+ +G +   G N     G  +      +PR+++ ++G    +V AG   +  LT  G 
Sbjct: 136 AVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQ 195

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V++ G  + G LGHGD  +R  P  +  L    ++V IAAG  +  AV+ +G V+++G  
Sbjct: 196 VYSFGEGSFGALGHGDVNNRAKPTLVQALWPE-AIVSIAAGEYFSAAVSLSGRVFTWGRN 254

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LG+GE  +   P+ +    +     V+V+ GD H +AL   G VYTWG    G LG
Sbjct: 255 KYGQLGNGEFGNAFLPQPVPGIEQ----AVQVACGDHHCIALTRWGEVYTWGLHSSGQLG 310

Query: 358 HGDEIDKTL-------PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  +           P  + SL      QV A  R +F +     ++G G    G L  
Sbjct: 311 QGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQLAL 370



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 12/228 (5%)

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIA-AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 310
           G+    PTP    P+E  G   Q++ A P    AV+    +Y++G       G G   + 
Sbjct: 4   GEDSRPPTPSE--PMEADGMERQLSWALPELPPAVSS---LYTWGRSDLGQTGSGRDQNS 58

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEP 369
             P  +Q    +G  VV  + G  +   +   G +YT G      LG  G E+    P  
Sbjct: 59  TAPEPVQAL--QGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREV-ALEPIR 115

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           +S+L+ +    V   +     +VD G +  +G   +G LG  + G S    +PR+L  +R
Sbjct: 116 VSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGAS--AAQPRVLKRIR 173

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             H ++++ G  H++ +T  G+++ FG+     LGH  +    +PT +
Sbjct: 174 GAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLV 221



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 10/142 (7%)

Query: 115 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G Y +  +S S  VF+ G +  G LG+G       +F     P     VQV+  +
Sbjct: 230 VSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGN---AFLPQPVPGIEQAVQVACGD 286

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDT------NRPIFRPRLVEALKGVPCKQVTAGLN 227
           +H   + + G+V+T G +SS   G          N  +  P  V++L     +QV+AG  
Sbjct: 287 HHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGAR 346

Query: 228 FTGFLTIRGHVHTCGSNTHGQL 249
            + F++    +   G+N  GQL
Sbjct: 347 HSFFVSPGEQLWGAGANDEGQL 368


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2742 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2799

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2800 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2858

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2859 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2916

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2917 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2976

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2977 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3033

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3034 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3059



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2830

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2888

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2889 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2945

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2946 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2991



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3794 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3852

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3853 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3911

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3912 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3969

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3970 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4029

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4030 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4066



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3780 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3839

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3840 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3898

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3899 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3958

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3959 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4015

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4016 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4044



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 149/311 (47%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     V ++G+V T   NS       DT      P+LV+ L      ++ A 
Sbjct: 430 VTQIACAEKRLLIVXRNGRVXTQAYNS-------DT----LVPQLVQGLASRNVVKIAAH 478

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G     +LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 479 SDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 538

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 596

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 656

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 657 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 713

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 714 DQCQ-HFDTLR 723



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   +LAVT +G +Y
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLLAVTADGKLY 3759

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3760 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3819

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3820 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3879

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3880 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3936

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 3937 CKVPMKI 3943



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2808 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2866

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2867 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2985 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3042

Query: 358  HG 359
            +G
Sbjct: 3043 NG 3044



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G      LGHG       P+     S  +    +  HVV ++
Sbjct: 479 SDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 534

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 535 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 593

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 594 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 652

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 653 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 710

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 711 GSN--DQCQHFDTLRVTKPEP 729



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA     +L V  NG V +    S          D L P+ +Q    + +  +   +
Sbjct: 430 VTQIACAEKRLLIVXRNGRVXTQAYNS----------DTLVPQLVQGLASRNVVKIAAHS 479

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G    LGHGD +    P+ +S+     A    V +      
Sbjct: 480 DGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 539

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 540 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 596

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 633



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 115/285 (40%), Gaps = 60/285 (21%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 3792 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 3850

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--------------- 216
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G               
Sbjct: 3851 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 3909

Query: 217  -----------------------------VPCK----------QVTAGLNFTGFLTIRGH 237
                                         VP K          +V  G  F+  LT  G 
Sbjct: 3910 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 3969

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V+T G   + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G  
Sbjct: 3970 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQG-KKVIAIATGSLHCVCCTEDGEVYTWGDN 4028

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
                LG G  +   +PR +   + K ++  RV+ G  H +A  +S
Sbjct: 4029 DEGQLGDGTTNAIQRPRLVAALQGKKVN--RVACGSAHTLAWSTS 4071



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2856 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2914

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2915 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2973

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2974 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3032

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3033 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3075



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 589 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 647

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 648 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 706

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPS 280
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+
Sbjct: 707 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPA 748



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++    + 
Sbjct: 3694 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVT 3753

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3754 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3810

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3811 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3837



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 379
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2693 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2747

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 437
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2748 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 2804

Query: 438  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 2805 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 2845


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 162/352 (46%), Gaps = 18/352 (5%)

Query: 133 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 192
           +S G +  G L H     + +  T I+F     ++ V+      AF+ ++G VFTCG N 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLP-TPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYND 72

Query: 193 SFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           S  CG   T+R +   RLV AL  + +   +   G      ++  G ++T G N+ GQLG
Sbjct: 73  SGQCGIGSTSR-VQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLG 131

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 310
           HG T    TP  I  L     VV++A    + + +T  G +Y+FG      LG  +  D 
Sbjct: 132 HGSTNPITTPTKIKDLASY-HVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDR 190

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-----KT 365
             P  +  F  +   V+ V+ G  H V   ++G V  +GK   G LG G  +D       
Sbjct: 191 HVPVPLTYFNSRP--VLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSL 248

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
           L  PL SL   +   +      T  L + GSVY FG   +G LG    G    +  P ++
Sbjct: 249 LAAPLDSL---VVPSLACGYYHTIALAEHGSVYSFGRNDYGQLG---HGHRHHLSEPTLI 302

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +L   H  Q++ G YHT+V+++ G+++ FG N   QLG   L  C  P  I
Sbjct: 303 KALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQII 354



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 161/368 (43%), Gaps = 25/368 (6%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG 146
           N    R L    S  H+  I++ + GN+           L     VF+CG +  G  G G
Sbjct: 27  NDTVDRTLPTPISFCHNVKILDVACGNEQT-------AFLFETGDVFTCGYNDSGQCGIG 79

Query: 147 PETTQCVSFTRINFPS-----AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 201
             +T  V   R+  P+      AH+   +  E H   + +SG ++T G NS    GH  T
Sbjct: 80  --STSRVQSLRL-VPALVTEDIAHIRSANGCE-HLTAISRSGALYTFGFNSRGQLGHGST 135

Query: 202 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           N PI  P  ++ L      +V      T  +T+ G ++  G N  GQLG  D +DR  P 
Sbjct: 136 N-PITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVP- 193

Query: 262 SIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
              PL    S  V+ +A G  + +    NG V +FG   +  LG G   D     ++   
Sbjct: 194 --VPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAA 251

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               + V  ++ G  H +AL   G VY++G+   G LGHG     + P  + +L    AV
Sbjct: 252 PLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAV 311

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
           QV      T VL + G VY FG    G LG    G       P+I+ SLR   V ++++G
Sbjct: 312 QVTCGCYHTLVLSEDGKVYPFGRNNHGQLGL---GNLIDCTSPQIIASLRDKFVVKVASG 368

Query: 440 LYHTVVVT 447
            YH++ +T
Sbjct: 369 FYHSICLT 376


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 155/327 (47%), Gaps = 29/327 (8%)

Query: 160 FPSAAHVVQVSASEN------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 213
           FP A     V   +N      HAA V + G+VF+ G+ S    GH   +  +  P+L+EA
Sbjct: 299 FPKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIEA 357

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVG 270
           L     + V  G   +  +T+ G ++T G+ T+  G LGHG+ +    PK +  PLE + 
Sbjct: 358 LSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGI- 416

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
            V  I+ GP +   VT  G +++FG G+   LGHG++     PR +++   KG+  VR +
Sbjct: 417 HVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESL--KGLRTVRAA 474

Query: 331 AGDEHVVAL------------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
            G  H  A+             SS  ++TWG G  G LGH D+  K +P  ++ L  H  
Sbjct: 475 CGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVA-LAEHNV 533

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
            QV      T  L  +G VY  G   +G LG P    +D  L   +   L    V +I+ 
Sbjct: 534 CQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQ---ADGKLPILVEGKLSESFVEEIAC 590

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G YH  V+T R  ++ +G     +LGH
Sbjct: 591 GAYHVAVLTSRTEVYTWGKGANGRLGH 617



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 133/291 (45%), Gaps = 22/291 (7%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 156
           V H   I   S  N   +  G YH+  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 349 VLHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVP-K 407

Query: 157 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R+N P    HV  +S    H A V  +GQ+FT GD +    GH D  + +  PR VE+LK
Sbjct: 408 RVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGD-RKSVSLPREVESLK 466

Query: 216 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           G+   +   G+  T  +                 + T G    G+LGH D   +  P  +
Sbjct: 467 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCV 526

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           A  E   +V Q+A G S  +A+T +G VY+ GS     LG+  Q D   P  ++    + 
Sbjct: 527 ALAEH--NVCQVACGHSLTVALTTSGRVYTMGSPVYGQLGN-PQADGKLPILVEGKLSES 583

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 584 F-VEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALK 633



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 26/295 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D   PK I  L 
Sbjct: 300 PKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALS 359

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT +G +Y++G+G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 360 NT-NIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 417

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + S+G ++T+G G  GALGHGD    +LP  + SLK    V+     
Sbjct: 418 VSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGV 477

Query: 386 RKTFVLVDTG------------SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+               ++ +G    G LG  D+   +  L P  + +L  H+V
Sbjct: 478 WHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDK---EAKLVPTCV-ALAEHNV 533

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 482
            Q++ G   TV +T  GR++  G     QLG+    G L      + +E F++E+
Sbjct: 534 CQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKLPILVEGKLSESFVEEI 588



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 19/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT +++++  +F+ G    G LGHG   +  VS  R +        V+ +    
Sbjct: 421 ISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKS--VSLPREVESLKGLRTVRAACGVW 478

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            S  +FT GD      GH D    +  P  V   +   C QV
Sbjct: 479 HTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLV-PTCVALAEHNVC-QV 536

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G + T  LT  G V+T GS  +GQLG+    D   P  +        V +IA G  ++
Sbjct: 537 ACGHSLTVALTTSGRVYTMGSPVYGQLGNPQA-DGKLPILVEGKLSESFVEEIACGAYHV 595

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T    VY++G G+N  LGHG+  D   P  ++  + K +  +
Sbjct: 596 AVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSI 640



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 22/199 (11%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGH  +  +
Sbjct: 469 RTVRAACGVWHTAAVVE--------VMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAK 520

Query: 152 ----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 207
               CV+    N      V QV+   +    +  SG+V+T G       G+   +  +  
Sbjct: 521 LVPTCVALAEHN------VCQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKL-- 572

Query: 208 PRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           P LVE  L     +++  G      LT R  V+T G   +G+LGHGDT DR TP  +  L
Sbjct: 573 PILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEAL 632

Query: 267 EEVGSVVQIAAGPSYMLAV 285
           ++   V  IA G ++  A+
Sbjct: 633 KD-KDVKSIACGTTFTAAI 650



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 3/127 (2%)

Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N  Q+  G   T+ ++ S  V++ GS + G LG+ P+    +        S + V +++ 
Sbjct: 532 NVCQVACGHSLTVALTTSGRVYTMGSPVYGQLGN-PQADGKLPILVEGKLSESFVEEIAC 590

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H A +    +V+T G  ++   GH DT+     P LVEALK    K +  G  FT  
Sbjct: 591 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTD-DRNTPTLVEALKDKDVKSIACGTTFTAA 649

Query: 232 LTIRGHV 238
           + +   V
Sbjct: 650 ICLHKWV 656


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
           SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 583 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 640

Query: 220 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 641 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 699

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 700 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 757

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 758 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 817

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 818 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 874

Query: 456 GDNERAQLGHDTLRGCLEPTEIFIQEME 483
           GDN+  Q G+ T     +PT   +Q +E
Sbjct: 875 GDNDHGQQGNGTTTVNRKPT--LVQGLE 900



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
           +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 553 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 611

Query: 244 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
            T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 612 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 671

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 672 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 729

Query: 362 IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
             +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 730 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 786

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 787 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 832



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 1635 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 1693

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 1694 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 1752

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 1753 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1810

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 1811 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1870

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 1871 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 1907



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 1621 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 1680

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 1681 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 1739

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 1740 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 1799

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 1800 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1856

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 1857 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 1885



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 1633 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 1691

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 1692 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 1750

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 1751 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 1809

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 1810 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 1867

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 1868 DNDEGQLGDG 1877



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 1600

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 1601 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 1660

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 1661 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 1720

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 1721 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 1777

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 1778 CKVPMKI 1784



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 649 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 707

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 708 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 766

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 767 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 825

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 826 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 883

Query: 358 HG 359
           +G
Sbjct: 884 NG 885



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 697 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 755

Query: 176 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 756 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 814

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 815 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 873

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
           +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 874 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 916



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 1745 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1803

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1804 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1862

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1863 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1908



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 1535 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 1594

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 1595 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1651

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 1652 EVYSWGEAEDGKLGHGNRSPCDRPRVI 1678



 Score = 45.4 bits (106), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345 VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 554 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 610

Query: 402 WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
               G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 611 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 667

Query: 459 ERAQLGHDTLRGCLEPTEI 477
           +  +LGH +   C +P  I
Sbjct: 668 DDGKLGHFSRMNCDKPRLI 686


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4073 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4131

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4132 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4190

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4191 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4248

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4249 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4308

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4309 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4345



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4059 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4118

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4119 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4177

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4178 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4237

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4238 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4294

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4295 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4323



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4071 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4129

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4130 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4188

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4189 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4247

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4248 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4305

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4306 DNDEGQLGDG 4315



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4038

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4039 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4098

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4099 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4158

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4159 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4215

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4216 CKVPMKI 4222



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 358  HG 359
            +G
Sbjct: 3291 NG 3292



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4183 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4241

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4242 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4300

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4301 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4346



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3973 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4032

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4033 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4089

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4090 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4116



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 379
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 437
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 438  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2995 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3052

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3053 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3111

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3112 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3169

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3170 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3229

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3230 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3286

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3287 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3312



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2965 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3023

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3024 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3083

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3084 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3141

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3142 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3198

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3199 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3244



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4047 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4105

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4106 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4164

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4165 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4222

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4223 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4282

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4283 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4319



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4093 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4151

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4211

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4212 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4268

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4269 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4297



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 399 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 447

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 565

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 566 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 625

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 626 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 683 DQCQ-HFDTLR 692



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4045 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4103

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4104 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4162

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4163 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4221

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4222 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4279

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4280 DNDEGQLGDG 4289



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4012

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4013 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4073 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4132

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4133 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4189

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4190 CKVPMKI 4196



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3061 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3119

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3120 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3178

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3179 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3237

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3238 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3295

Query: 358  HG 359
            +G
Sbjct: 3296 NG 3297



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 444

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 445 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 495

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 496 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 554

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 555 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 613

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 614 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 671

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 672 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 698



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 399 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 448

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 449 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 508

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 509 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 565

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 566 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 602



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3109 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3167

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3168 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3226

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3227 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3285

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3286 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3328



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4215

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4216 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4274

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4275 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4320



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 558 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 616

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 617 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 675

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 676 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 721



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3947 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4007 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4090



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 379
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2946 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 3000

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 437
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 3001 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3057

Query: 438  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3058 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3098


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 161/340 (47%), Gaps = 22/340 (6%)

Query: 156  TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 207
            T I  PS      A +VVQV+        V   G+V+ CG+  N     G      PI  
Sbjct: 2682 TEIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPI-- 2739

Query: 208  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            PR V AL     K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  
Sbjct: 2740 PRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 2799

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  
Sbjct: 2800 LK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHR 2856

Query: 326  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
            V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q+  
Sbjct: 2857 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIEC 2916

Query: 384  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
              + +  L  +G V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H 
Sbjct: 2917 GAQFSLALTKSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHC 2973

Query: 444  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
            + VTD G+++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2974 LAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 3011



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 149/304 (49%), Gaps = 23/304 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQPLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L++L+   V  ++ G  H + +T+   +  +G+N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNN 737

Query: 459 ERAQ 462
           ++ Q
Sbjct: 738 DQCQ 741



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 110/245 (44%), Gaps = 45/245 (18%)

Query: 273  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            V + +G  + LA++  G VYS+G   +  LGHG +    +PR +++ R  G  VV ++AG
Sbjct: 3721 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLR--GTEVVDIAAG 3778

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFV 390
              H   + S+G +YTWGKG  G LGH D  D+  P+ + +L+ H  V V   +   +T  
Sbjct: 3779 GAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLC 3838

Query: 391  LVDTGSVYGFGWMGFGSLG----------------------------FPD---------- 412
            L D  +V+ +G   +G LG                            +P           
Sbjct: 3839 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYH 3898

Query: 413  ---RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
                G  D V RPR +  L+   V  I+TG  H V  T+ G ++ +GDN+  QLG  T  
Sbjct: 3899 RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTN 3958

Query: 470  GCLEP 474
                P
Sbjct: 3959 AIQRP 3963



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 9/203 (4%)

Query: 271 SVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHV 326
           ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  ++ G HV
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 384
           V ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + V   + 
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             +   + D G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   +V
Sbjct: 615 DAQPLAVTDNGQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 445 VVTDRGRLFGFGDNERAQLGHDT 467
            +T  G+++ +G  +  +LGH T
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT 694



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3686

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3687 ATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 3746

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG  D
Sbjct: 3747 DGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSD 3806

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3807 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3863

Query: 471  CLEPTEI 477
            C  P ++
Sbjct: 3864 CKVPMKV 3870



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 151/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P + + L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 500 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 550

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 609

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 610 ACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 668

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 669 FSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEAL--QGKKVIDVAAGSTHCLALT 726

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D + +T PEP
Sbjct: 727 EDSEVHSWGNN--DQCQHFDTLHQTKPEP 753



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2760 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2818

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2819 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2877

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2878 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2936

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2937 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2994

Query: 358  HG 359
            +G
Sbjct: 2995 NG 2996



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 17/281 (6%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G     + AG 
Sbjct: 3721 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGTEVVDIAAGG 3779

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 3780 AHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 3838

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  +    R G    R S        LD    
Sbjct: 3839 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVG----RPSTPPPSWPRLDVG-- 3892

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
                GKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3893 ----GKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDND 3948

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 3949 EGQLG---DGTTNAIQRPRLVAALQGRKVNRVACGSAHTLA 3986



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 25/232 (10%)

Query: 263 IAPLEEVG----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 318
           I P++  G     V QIA      L ++ NG VY+    S          D L P+ +Q 
Sbjct: 441 IGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQG 490

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
              + I  +   +   H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A
Sbjct: 491 LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 379 ----VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
               V +      +  +   G +Y +G   +G LG    G S+    P ++  L+   V 
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVI 607

Query: 435 QIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
            ++  +G    + VTD G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 608 DVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 107/249 (42%), Gaps = 16/249 (6%)

Query: 114  QMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
            ++ + +G  H L +S+   V+S G +  G LGHG   + C     +       VV ++A 
Sbjct: 3720 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVVESLRGTEVVDIAAG 3778

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 230
              H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T 
Sbjct: 3779 GAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQTL 3837

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             LT    V + G   +G+LG G +     P  +     VG        PS+     G   
Sbjct: 3838 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGR--PSTPPPSWPRLDVG--- 3892

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
                G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG 
Sbjct: 3893 ----GKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEEGEVYTWGD 3946

Query: 351  GYCGALGHG 359
               G LG G
Sbjct: 3947 NDEGQLGDG 3955



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2808 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2866

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2867 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2925

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2926 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 2984

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2985 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3027



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 17/170 (10%)

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
            +HDE   + +Q   R+          D+  ++   SG +Y WG  + G LG  +     +
Sbjct: 3607 EHDE---QLVQWMNRRP---------DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKV 3654

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P P  +L +   VQ+   ++  F +   G +Y     G+G+ G    G ++ V  P +L+
Sbjct: 3655 PTPCEALATLRPVQLIGGEQTLFAVTADGKLYA---TGYGAGGRLGVGGTESVSAPTLLE 3711

Query: 427  SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            S++   + +++  +G  H + ++  G ++ +G+ E  +LGH     C  P
Sbjct: 3712 SIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP 3761


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 255 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL--TD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+++ G  H +AL     V++WG+   G LG G E+ + + P+ + SL      QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 7/273 (2%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 156
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVP 128

Query: 157 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 336 VVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             A + SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 291
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ 317
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 6/217 (2%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAGNQM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 167
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 228 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2686 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2743

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2744 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2802

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2803 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2860

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2861 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2920

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2921 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2977

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2978 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3003



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2656 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2714

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2715 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2774

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2775 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2832

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2833 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2889

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2890 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2935



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3738 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3796

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3797 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3855

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3856 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3913

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3914 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3973

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3974 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4010



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3724 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3783

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3784 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3842

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3843 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3902

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3903 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3959

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3960 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3988



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 3736 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 3794

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 3795 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 3853

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 3854 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 3912

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 3913 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 3970

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 3971 DNDEGQLGDG 3980



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3703

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3704 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3763

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3764 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3823

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3824 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3880

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 3881 CKVPMKI 3887



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2752 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2810

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2811 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2869

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2870 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2928

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2929 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2986

Query: 358  HG 359
            +G
Sbjct: 2987 NG 2988



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 15/181 (8%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  P   E L  +   Q+         L+  G V+T   N+       DTL    P+ + 
Sbjct: 394 VIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS-------DTL---APQLVQ 443

Query: 265 PLEEVGSVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--R 320
            L    ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  +
Sbjct: 444 GLAS-RNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGK 502

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
           + G HVV ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + 
Sbjct: 503 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVID 562

Query: 381 V 381
           V
Sbjct: 563 V 563



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 20/181 (11%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 408 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 456

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 457 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 516

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 517 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 574

Query: 339 L 339
           +
Sbjct: 575 V 575



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2800 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2858

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2859 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2917

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2918 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2976

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2977 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3019



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3848 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3906

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3907 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3965

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3966 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4011



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3638 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3697

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3698 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3754

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3755 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3781



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 379
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2637 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2691

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 437
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2692 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 2748

Query: 438  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 2749 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 2789


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2983 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3040

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3041 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3099

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3100 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3157

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3158 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3217

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3218 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3274

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3275 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3300



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2953 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3011

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3012 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3071

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3072 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3129

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3130 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3186

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3187 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3232



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3984 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4042

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4043 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4101

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4102 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4159

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4160 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4219

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4220 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4256



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4030 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4088

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4089 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4148

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4149 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4205

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4206 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4234



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 3982 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4040

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4041 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4099

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4100 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4158

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4159 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4216

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4217 DNDEGQLGDG 4226



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3049 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3107

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3108 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3166

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3167 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3225

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3226 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3283

Query: 358  HG 359
            +G
Sbjct: 3284 NG 3285



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 5/167 (2%)

Query: 313  PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
            P  +++ +   I  V V++G +H +AL S G VY+WG+   G LGHG+      P  + S
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 373  LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
            L+    V V A    +  +   G +Y +G   +G LG  D   S+  L+P+++++L+ H 
Sbjct: 4030 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---SEDQLKPKLVEALQGHR 4086

Query: 433  VSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            V  I+  +G   T+ +TD   ++ +GD +  +LG     GC  P +I
Sbjct: 4087 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4133



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3097 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3155

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3156 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3214

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3215 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3273

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3274 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3316



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 379
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2934 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2988

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 437
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2989 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3045

Query: 438  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3046 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3086


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3048

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4209

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4210 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4267 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4043 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4101

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T
Sbjct: 4102 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQT 4160

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4161 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4219

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4220 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4277

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4278 DNDEGQLGDG 4287



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 358  HG 359
            +G
Sbjct: 3292 NG 3293



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 500 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 550

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 609

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 668

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 669 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 726

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 727 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 255 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL--TD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+++ G  H +AL     V++WG+   G LG G E+ + + P+ + SL      QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 7/273 (2%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 156
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVP 128

Query: 157 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 336 VVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             A + SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 291
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ 317
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 6/217 (2%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAGNQM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 167
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 228 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G +T GQLG   T
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGT 121

Query: 255 LDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
            +    P++I  L ++  +VQIA G  + LA++    V+S+G   +  LG G E   +  
Sbjct: 122 EEYIRVPRNIKSLTDI-QIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI   +V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG     + ++ PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSL--TD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+++ G  H +AL     V++WG+   G LG G E+ + + P+ + SL      QV 
Sbjct: 137 IQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRFV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G ++    G   T   I  PR +++L  +   Q+  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N HGQLG G  L R  +P+ I  L  +    Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLLGI-PFTQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRFVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 7/273 (2%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 156
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  P T + +   
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-PGTEEYIRVP 128

Query: 157 R-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R I   +   +VQ++    H+  + +  +VF+ G N     G     +    P+L+++L 
Sbjct: 129 RNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I
Sbjct: 189 GIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRS-QKIVYI 247

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQH 305

Query: 336 VVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             A + SSG +Y++G G  G LG G   ++  P
Sbjct: 306 TSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 98/206 (47%), Gaps = 6/206 (2%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI  G YH+L +S  S VFS G +  G LG G E  +  S   I         QV+A  
Sbjct: 140 VQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  SG +F  G N     G  D N   F P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-FVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 291
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ 317
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 6/217 (2%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  +SL D+   Q+   +     +S+  ++    + N + +  L F    + S  ++++
Sbjct: 128 PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQ-NKHGQLGLGFELKRQSSPQLIKS 186

Query: 110 SAGNQM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 167
             G    Q+  G  H+ +++ S ++F  G +  G LG   E  + V    +    +  +V
Sbjct: 187 LLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVP-NLLKSLRSQKIV 245

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            +   E+H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G  
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQ 304

Query: 228 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
            T  F+   G +++ G   +GQLG G T +R +P ++
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 160/326 (49%), Gaps = 12/326 (3%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA +VVQV+        V   G+V+ CG+ ++   G   ++  +  PR V AL     K+
Sbjct: 1295 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTALSSYVVKK 1354

Query: 222  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA G 
Sbjct: 1355 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIACGS 1413

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 337
            S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1414 SHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLL--GHRVVQVACGSRDAQTL 1471

Query: 338  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 1472 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVV 1531

Query: 398  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 1532 WTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 1588

Query: 458  NERAQLGHDTLRGCLEPTEIFIQEME 483
            N+  Q G+ T     +PT   +Q +E
Sbjct: 1589 NDHGQQGNGTTTVNRKPT--LVQGLE 1612



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 131/262 (50%), Gaps = 9/262 (3%)

Query: 208  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 266
            P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ +  L
Sbjct: 1288 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTAL 1347

Query: 267  EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
               V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 1348 SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 1407

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 383
               ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  VQV   +
Sbjct: 1408 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGS 1465

Query: 384  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
            R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   +
Sbjct: 1466 RDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFS 1522

Query: 444  VVVTDRGRLFGFGDNERAQLGH 465
            + +T  G ++ +G  +  +LGH
Sbjct: 1523 LALTKSGVVWTWGKGDYFRLGH 1544



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+G+    V AG 
Sbjct: 2350 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGIEVVDVAAGG 2408

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 2409 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVGIACGSGDAQTLC 2467

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VVRV  G +  VAL  +G 
Sbjct: 2468 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVRVECGSQFSVALTKAGA 2525

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+   A+ +           + G VY +G   
Sbjct: 2526 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDND 2585

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 2586 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 2622



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 7/315 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 2291 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESIQHVFIKK 2349

Query: 222  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      L+  G V++ G    G+LGHG       P+ I  L  +  VV +AAG 
Sbjct: 2350 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGI-EVVDVAAGG 2408

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  +   +GD   + L
Sbjct: 2409 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCL 2468

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                 V++WG G  G LG G      +P  + SL     V+V    + +  L   G+VY 
Sbjct: 2469 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYT 2528

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G  D V RPR +  L+      I+TG  H V  T+ G ++ +GDN+
Sbjct: 2529 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDND 2585

Query: 460  RAQLGHDTLRGCLEP 474
              QLG  T      P
Sbjct: 2586 EGQLGDGTTNAIQRP 2600



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1361 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 1419

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH DT   + +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1420 TSSGELYTWGLGEYGRLGHGDTTTQL-KPKMVKVLLGHRVVQVACGSRDAQTLALTDEGL 1478

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1479 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 1537

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 1538 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 1595

Query: 358  HG 359
            +G
Sbjct: 1596 NG 1597



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 2315

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 2316 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2375

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 2376 DGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 2435

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 2436 ---SEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2492

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 2493 CKVPMKI 2499



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 119/253 (47%), Gaps = 14/253 (5%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 2348 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-SRSPCDRPRVIESLRGIEVVDVAA 2406

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-----GVPCKQVTAGL 226
               H+A V  +G ++T G       GH D+   + +P+LVEAL+     G+ C    +G 
Sbjct: 2407 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVGIACG---SGD 2462

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
              T  LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T
Sbjct: 2463 AQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVRVECGSQFSVALT 2521

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
              G VY++G G    LGHG      +PR +Q    +G   + ++ G  H V     G VY
Sbjct: 2522 KAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKAIAIATGSLHCVCCTEDGEVY 2579

Query: 347  TWGKGYCGALGHG 359
            TWG    G LG G
Sbjct: 2580 TWGDNDEGQLGDG 2592



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 7/196 (3%)

Query: 281  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            + L+  G+G +Y +G      LG  E      P   +      +  V++  G++ + A+ 
Sbjct: 2252 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEAL--AALRPVQLIGGEQTLFAVT 2309

Query: 341  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK--RKTFVLVDTGSVY 398
            + G +Y  G G  G LG G     + P  L S++     +V      +    L   G VY
Sbjct: 2310 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 2369

Query: 399  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             +G    G LG   R   D   RPR+++SLR   V  ++ G  H+  VT  G L+ +G  
Sbjct: 2370 SWGEAEDGKLGHGSRSPCD---RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2426

Query: 459  ERAQLGHDTLRGCLEP 474
               +LGH      L+P
Sbjct: 2427 RYGRLGHSDSEDQLKP 2442



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2460 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVRVECGSQFSV 2518

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + ++G V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 2519 ALTKAGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGE 2577

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 2578 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 2623



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 2250 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 2309

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 2310 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2366

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH +   C  P  I
Sbjct: 2367 EVYSWGEAEDGKLGHGSRSPCDRPRVI 2393



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 9/113 (7%)

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILD 426
            E LS+L     VQV    +  F +   G VY  G    G LG    G+S   V  PR + 
Sbjct: 1292 ETLSALN---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GLSSGTVPLPRQVT 1345

Query: 427  SLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +L ++ V +++  +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 1346 ALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 1398


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4099 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4157

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4216

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4217 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4275 DNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 358  HG 359
            +G
Sbjct: 3291 NG 3292



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 157/328 (47%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2993 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYVV 3050

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L     +  IA 
Sbjct: 3051 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALR-AKRIRDIAC 3109

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3110 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3167

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3168 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3227

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3228 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3284

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3285 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3310



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3021

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3022 ATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3081

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  R K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3082 LGHFSRMNCDKPRLIEALRAKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3139

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3140 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3196

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3197 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3242



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH  +  P  RPR+VE+L+G+    V AG 
Sbjct: 4046 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVVESLRGIEVVDVAAGG 4104

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4105 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQG-HRVVDVACGSGDAQTLC 4163

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4164 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESL--TGLGVVKVECGSQFSVALTKSGA 4221

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4281

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4282 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG       P+ +  
Sbjct: 4032 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVES 4091

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4092 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4150

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4151 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGS 4210

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4211 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4267

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4268 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4296



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 149/311 (47%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V + G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  PR+L+ L    V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I    A  +  ++   +H+A +
Sbjct: 3059 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALRAKRIRDIACGSSHSAAL 3117

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3118 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3176

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3177 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3235

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3236 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3293

Query: 358  HG 359
            +G
Sbjct: 3294 NG 3295



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 119/249 (47%), Gaps = 8/249 (3%)

Query: 114  QMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
            ++ + +G  H L +S+   V+S G +  G LGHG  +  C     +       VV V+A 
Sbjct: 4045 KVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPRVVESLRGIEVVDVAAG 4103

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTG 230
              H+A V  +G ++T G       GH D+   + +P+LVE L+G     V   +G   T 
Sbjct: 4104 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEVLQGHRVVDVACGSGDAQTL 4162

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 4163 CLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLG-VVKVECGSQFSVALTKSGA 4221

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG 
Sbjct: 4222 VYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWGD 4279

Query: 351  GYCGALGHG 359
               G LG G
Sbjct: 4280 NDEGQLGDG 4288



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4011

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4012 ATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAE 4071

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4072 DGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4131

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P++++ L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4132 ---SEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4188

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4189 CKVPMKI 4195



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 147/329 (44%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   VFS G    G LGHG       P+     S  +     
Sbjct: 500 AAHSD-----GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----G 550

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 609

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-EVVKVRCGSQ 668

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     PR ++     G  V+ V+AG  H +AL 
Sbjct: 669 FSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLH--GKKVIDVAAGSTHCLALT 726

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 727 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 22/220 (10%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-----SHLAVQVCARKR 386
              H +AL ++G V++WG G  G LGHGD +    P+ +S+        H+    C    
Sbjct: 504 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTY 563

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTV 444
              +  + G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+
Sbjct: 564 SAAITAE-GELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-FIQEME 483
            VT+ G+++ +GD +  +LG     GC  P  I  +Q++E
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLE 659



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3107 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3165

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3166 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3224

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3225 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3283

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3284 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3326



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLEVVKVRCGSQFSV 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  PRL+E L G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I   +   VV+V      + 
Sbjct: 4156 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIESLTGLGVVKVECGSQFSV 4214

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4273

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4274 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4319



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 71/144 (49%), Gaps = 5/144 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3946 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4005

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4006 ADGKLYA---TGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4062

Query: 451  RLFGFGDNERAQLGHDTLRGCLEP 474
             ++ +G+ E  +LGH +   C  P
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDRP 4086



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 379
            G  + + SAG E   A+ +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2944 GSLIRKKSAGLESSAAVRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2998

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 437
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2999 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GLSSGTVPIPRQITALSSYVVKKVAV 3055

Query: 438  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3056 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3096


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VYS+G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 146/309 (47%), Gaps = 12/309 (3%)

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
           +F +   V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL    
Sbjct: 29  DFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQN 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAA 277
              V+ G   T  L  +G V++ G ++ GQLG  G       P++I  L ++  +VQ+A 
Sbjct: 86  IVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDI-QIVQVAC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  H 
Sbjct: 145 GYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL--GIPFMQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
             L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   G 
Sbjct: 203 FVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGG 262

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGF 455
           V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V   GR++ F
Sbjct: 263 VFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSF 319

Query: 456 GDNERAQLG 464
           G     QLG
Sbjct: 320 GLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 5/272 (1%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 156
           +S +    +V   A N + ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 337 VA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            A + SSG +Y++G G  G LG G   ++  P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EEYIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2968 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3025

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3026 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3084

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3085 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3142

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3143 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3202

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3203 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3259

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3260 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3285



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2938 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2996

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2997 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3056

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3057 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3114

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3115 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3171

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3172 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3217



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4008 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4067

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4068 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4126

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4127 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4186

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4187 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4243

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4244 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4272



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4022 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4080

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4081 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4139

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4140 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4197

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4198 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4257

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4258 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4294



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 431 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 479

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 480 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 539

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 540 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 597

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 598 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 657

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 658 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 714

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 715 DQCQ-HFDTLR 724



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4020 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4078

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T
Sbjct: 4079 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQT 4137

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4138 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4196

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4197 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4254

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4255 DNDEGQLGDG 4264



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3987

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3988 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4047

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4048 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4107

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4108 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4164

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4165 CKVPMKI 4171



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3034 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3092

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3093 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3151

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3152 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3210

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3211 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3268

Query: 358  HG 359
            +G
Sbjct: 3269 NG 3270



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 480 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 535

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 536 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 594

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 595 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 653

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 654 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 711

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 712 GSN--DQCQHFDTLRVTKPEP 730



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 431 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 480

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 481 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 540

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 541 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 597

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 598 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 634



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3082 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3140

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3141 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3199

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3200 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3258

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3259 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3301



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4132 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4190

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4191 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4249

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4250 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4295



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 590 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 648

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 649 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 707

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 708 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 753



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3922 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3981

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3982 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4039 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4065



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 379
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2919 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2973

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 437
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2974 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3030

Query: 438  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3031 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3071


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 161/334 (48%), Gaps = 14/334 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR V AL     
Sbjct: 3251 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQVTALSSYVV 3308

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3309 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3367

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3368 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3425

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3426 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3485

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3486 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3542

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
            GDN+  Q G+ T     +PT +   E ++ T +A
Sbjct: 3543 GDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVA 3576



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 3221 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3279

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ +  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3280 ATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3339

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3340 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3397

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3398 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3454

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3455 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3500



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4301 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVADVAAGG 4359

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4360 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4418

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4419 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4476

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4477 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4536

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 4537 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4574



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4287 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4346

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  V  +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4347 LRGI-EVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4405

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4406 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4465

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4466 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4522

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4523 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4551



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 155/320 (48%), Gaps = 25/320 (7%)

Query: 166  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
            V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 714  VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 762

Query: 226  LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
             +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 763  SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGST 822

Query: 281  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
            Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 823  YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 880

Query: 339  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 881  VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 940

Query: 399  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 941  SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 997

Query: 459  ERAQLGHDTLRGCL-EPTEI 477
            ++ Q   DTLR    EPT +
Sbjct: 998  DQCQ-HFDTLRVTKPEPTAL 1016



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 119/250 (47%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       V  V+A
Sbjct: 4299 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVADVAA 4357

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4358 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4416

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4417 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4475

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4476 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4533

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4534 DNDEGQLGDG 4543



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3317 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3375

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3376 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3434

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3435 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3493

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3494 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3551

Query: 358  HG 359
            +G
Sbjct: 3552 NG 3553



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4266

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4267 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4326

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+      V A    +  +   G +Y +G   +G LG  D
Sbjct: 4327 DGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4386

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4387 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4443

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4444 CKVPMKI 4450



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 11/257 (4%)

Query: 118  TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 174
            + G ++  L +   V+S G    G LGHG   P     V  T     +  HVV ++    
Sbjct: 763  SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGST 822

Query: 175  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
            ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 823  YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 881

Query: 235  --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
               G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 882  TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 940

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 941  SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 997

Query: 353  CGALGHGDEIDKTLPEP 369
                 H D +  T PEP
Sbjct: 998  -DQCQHFDTLRVTKPEP 1013



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3365 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3423

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3424 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3482

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3483 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3541

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +     +G  + RV+ G  H VA
Sbjct: 3542 WGDNDHGQQGNGTTTVNRKPTLVHGL--EGQKITRVACGSSHSVA 3584



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4411 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4469

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4470 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4528

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4529 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4574



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 4201 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4260

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4261 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4317

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4318 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4344



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 3222 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3278

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3279 EATNGRLGL---GLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3335

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3336 DDGKLGHFSRMNCDKPRLI 3354


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4209

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4210 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4266

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4267 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4043 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4101

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T
Sbjct: 4102 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQT 4160

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4161 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4219

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4220 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4277

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4278 DNDEGQLGDG 4287



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 358  HG 359
            +G
Sbjct: 3292 NG 3293



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 379
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2942 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2996

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 437
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2997 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 438  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VYS+G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+Q++ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 5/272 (1%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 156
           +S +    +V   A N + ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 337 VA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            A + SSG +Y++G G  G LG G   ++  P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EEYIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VYS+G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F +   V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V++ G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EEYIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+Q++ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV++ G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  QV C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 5/272 (1%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 156
           +S +    +V   A N + ++ G  HTL +++   V+S G    G LG            
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPR 129

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
            I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L G
Sbjct: 130 NIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLG 189

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
           +P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I 
Sbjct: 190 IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYIC 248

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H 
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHT 306

Query: 337 VA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            A + SSG +Y++G G  G LG G   ++  P
Sbjct: 307 SAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EEYIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   I        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 340
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 341 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 315

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 316 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEI 477
           F +G     +LGH  +     PT++
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV 397



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 127/284 (44%), Gaps = 19/284 (6%)

Query: 106 IVET-SAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ +A N   +  G +HT  ++ +     +  G+   G+LGHG +    +        
Sbjct: 122 LVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGAL 181

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               V  VS    H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    
Sbjct: 182 DGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIA 240

Query: 222 VTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           V  G+  T  +              G + T G     +LGHGD   R  P  +A L +  
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY- 299

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
              ++A G S  + +T +G V S G+     LG+      L P  ++  R  G HV++V+
Sbjct: 300 DFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVA 357

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            G  HV  L     V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 358 CGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 401



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 365 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 172 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLG---HGNLTSISCPK 228

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 288

Query: 473 EPT 475
           +PT
Sbjct: 289 KPT 291



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 19/281 (6%)

Query: 199 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 257
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 315
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 316 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 376 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 292

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           + SL  +   +++ G   TV +T  G++   G++   QLG+
Sbjct: 293 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGN 333



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 17/221 (7%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 163
           ++ G +HT LI++   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 249 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 306 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 364

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 365 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 405



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 340 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 92  VTRNGDVFTWGEDSGGRLG---HGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 148

Query: 451 RLFGFGD--NERAQLGHDTLRGCLEPTEI 477
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2628 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPI--PRQITALSSYMV 2685

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2686 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2744

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2745 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2802

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2803 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSG 2862

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2863 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2919

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2920 GDNDHGQQGNGTTTVNRKPT--LVQGLE 2945



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2598 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2656

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   +   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2657 ATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2716

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2717 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2774

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2775 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2831

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2832 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2877



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+G+    V AG 
Sbjct: 3680 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGIEVVDVAAGG 3738

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3739 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3797

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3798 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSL--TGLGVVKVECGSQFSVALTKSGA 3855

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3856 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3915

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3916 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3952



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG       P+ I  
Sbjct: 3666 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES 3725

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3726 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3784

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3785 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGS 3844

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3845 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3901

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3902 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3930



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 152/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + +SG+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 190

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK+I+    ++ G  VV IA G +
Sbjct: 191 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGST 250

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 251 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 308

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 309 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 368

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 369 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 425

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 426 DQCQ-HFDTLR 435



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3645

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3646 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3705

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3706 DGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3765

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3766 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3822

Query: 471  CLEPTEI 477
            C  PT+I
Sbjct: 3823 CKVPTKI 3829



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG  +  C     I       VV V+A
Sbjct: 3678 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPRVIESLRGIEVVDVAA 3736

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 3737 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 3795

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 3796 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLG-VVKVECGSQFSVALTKSG 3854

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 3855 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 3912

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 3913 DNDEGQLGDG 3922



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2694 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2752

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2753 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2811

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2812 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2870

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2871 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2928

Query: 358  HG 359
            +G
Sbjct: 2929 NG 2930



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 191 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQ----AGKHVVHIA 246

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 247 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 305

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 306 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 364

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 365 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 422

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 423 GSN--DQCQHFDTLRVTKPEP 441



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ +G VY+    S          D L P+ +Q    + I  +   +
Sbjct: 142 VTQIACAEKRFLILSRSGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 191

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 192 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTY 251

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 252 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 308

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 309 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 345



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2742 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2800

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2801 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 2859

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2860 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2918

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2919 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2961



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C   T+I+  +   VV+V      + 
Sbjct: 3790 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPTKIDSLTGLGVVKVECGSQFSV 3848

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3849 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3907

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3908 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3953



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 301 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 359

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 360 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 418

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 419 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 464



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3580 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3639

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3640 ADGKLYA---TGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3696

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH +   C  P  I
Sbjct: 3697 EVYSWGEAEDGKLGHGSRSPCDRPRVI 3723



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2599 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 2655

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2656 EATNGRLGL---GLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 2712

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 2713 DDGKLGHFSRMNCDKPRLI 2731


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4099 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4157

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4216

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4217 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4275 DNDEGQLGDG 4284



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 358  HG 359
            +G
Sbjct: 3291 NG 3292



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4099 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4157

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4216

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4217 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4275 DNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 358  HG 359
            +G
Sbjct: 3291 NG 3292



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4099 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4157

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4216

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4217 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4275 DNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 358  HG 359
            +G
Sbjct: 3291 NG 3292



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 379
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2941 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2995

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 437
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2996 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3052

Query: 438  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3053 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3093


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 143/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+VS G  H +AL  +  V++WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 155/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ++ G  + LA++    V+S+G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 140/291 (48%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV+ G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFS 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 133/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQVS    H+  + ++ +VF+ G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 121/252 (48%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q++ G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVSCGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VFS G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4099 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4157

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4216

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4217 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4275 DNDEGQLGDG 4284



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 358  HG 359
            +G
Sbjct: 3291 NG 3292



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2998 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3055

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3056 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3114

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3115 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3172

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3173 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3232

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3233 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3289

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3290 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3315



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2968 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3026

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3027 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3086

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3087 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3144

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3145 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3201

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3202 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3247



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 10/271 (3%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4038 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4097

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++    +G H
Sbjct: 4098 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL--QGHH 4154

Query: 326  VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
            VV V+  +GD   + L     V++WG G  G LG G      +P  + SL     V+V  
Sbjct: 4155 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4214

Query: 384  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
              + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H 
Sbjct: 4215 GSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHC 4271

Query: 444  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4272 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4302



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4052 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4110

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4111 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HHVVDVACGSGDAQTLC 4169

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4170 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4227

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4228 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4287

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4288 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4324



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4017

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4018 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4077

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4078 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4137

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ HHV  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4138 ---SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4194

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4195 CKVPMKI 4201



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4050 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4108

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T
Sbjct: 4109 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHHVVDVACGSGDAQT 4167

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4168 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4226

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4227 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4284

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4285 DNDEGQLGDG 4294



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3064 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3122

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3123 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3181

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3182 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3240

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3241 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3298

Query: 358  HG 359
            +G
Sbjct: 3299 NG 3300



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 500 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 550

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDV 609

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 668

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 669 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 726

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 727 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3112 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3170

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3171 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3229

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3230 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3288

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3289 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3331



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4162 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4220

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4221 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4279

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4280 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4325



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3952 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4011

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4012 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4068

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4069 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4095



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2969 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3025

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3026 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3082

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3083 DDGKLGHFSRMNCDKPRLI 3101


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4099 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4157

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4216

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4217 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4275 DNDEGQLGDG 4284



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 358  HG 359
            +G
Sbjct: 3291 NG 3292



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2985 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3042

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3043 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3101

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3102 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3159

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3160 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3219

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3220 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3276

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3277 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3302



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2955 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3013

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3014 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3073

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3074 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3131

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3132 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3188

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3189 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3234



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4037 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4095

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4096 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4154

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4155 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4212

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4213 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4272

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4273 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4309



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4023 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4082

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4083 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4141

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4142 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4201

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4202 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4258

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4259 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4287



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4035 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4093

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4094 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4152

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4153 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4211

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4212 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4269

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4270 DNDEGQLGDG 4279



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4002

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4003 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4062

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4063 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4122

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4123 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4179

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4180 CKVPMKI 4186



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3051 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3109

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3110 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3168

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3169 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3227

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3228 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3285

Query: 358  HG 359
            +G
Sbjct: 3286 NG 3287



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3099 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3157

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3158 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3216

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3217 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3275

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3276 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3318



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4147 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4205

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4206 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4264

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4265 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4310



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3937 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3996

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3997 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4053

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4054 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4080



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 379
            G  + + +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2936 GSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2990

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 437
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2991 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3047

Query: 438  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3048 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3088


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 154/332 (46%), Gaps = 22/332 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H A V + G+VFT G+ S    GH   N    RP LVE L       V  G
Sbjct: 269 VHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND-FSRPHLVEFLAVNNVDFVACG 327

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  ++  G + T G  TH  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 328 EYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGL-QVLSVACGTWHS 386

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
              T NG +++FG G+   LGHG++     PR +Q     G+  ++V+ G  H  A+   
Sbjct: 387 ALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQIL--SGLKTIKVACGVWHTAAIIEV 444

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SS  ++TWG G    LGHG +    LP  +S+L  +   Q+      T  L 
Sbjct: 445 MSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALT 504

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G   +G LG P   +SD  L   + D L    V +IS G YH  V+T R  +
Sbjct: 505 TSGHVFTMGGTAYGQLGNP---LSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEV 561

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           F +G     +LGH        PT  F++ +++
Sbjct: 562 FTWGRGANGRLGHGDTEDRRSPT--FVEALKD 591



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 146/348 (41%), Gaps = 28/348 (8%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSA 171
           QI  G  H  L++    VF+ G    G LGHG +      F+R   + F +  +V  V+ 
Sbjct: 271 QIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDN----DFSRPHLVEFLAVNNVDFVAC 326

Query: 172 SENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
            E H   V  SG +FT GD  +++   GH          R+   L+G+    V  G   +
Sbjct: 327 GEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHS 386

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---- 285
              T  G + T G  T G LGHGD    P P+ +  L  +   +++A G  +  A+    
Sbjct: 387 ALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGL-KTIKVACGVWHTAAIIEVM 445

Query: 286 --TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             +G  +    ++++G G    LGHG +   L P  +        H  +++ G    VAL
Sbjct: 446 SQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFH--QLACGHTMTVAL 503

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +SG+V+T G    G LG+    D  LP  +   L      ++        VL     V+
Sbjct: 504 TTSGHVFTMGGTAYGQLGNPLS-DGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVF 562

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            +G    G LG    G ++    P  +++L+  +V  IS G   T  +
Sbjct: 563 TWGRGANGRLG---HGDTEDRRSPTFVEALKDRNVKSISCGSNFTASI 607



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 18/226 (7%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G +H+ L  SN  +F+ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 377 LSVACGTWHSALATSNGKLFTFGDGTFGVLGHG--DRESVPYPREVQILSGLKTIKVACG 434

Query: 173 ENHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             H A ++    QSG      ++FT GD      GH  +      P  V AL      Q+
Sbjct: 435 VWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGH-GSKETYLLPTCVSALIDYNFHQL 493

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 281
             G   T  LT  GHV T G   +GQLG  + L       +   + VG  V+ I+ G  +
Sbjct: 494 ACGHTMTVALTTSGHVFTMGGTAYGQLG--NPLSDGRLPCLVQDKLVGEFVEEISCGAYH 551

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           +  +T    V+++G G+N  LGHG+  D   P  ++  + + +  +
Sbjct: 552 VAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSI 597



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 4/172 (2%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L P+++++     +H  +++ G  HV  +   G V+TWG+   G LGHG + D + P 
Sbjct: 254 DVLTPKSLESNVVLDVH--QIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPH 311

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 427
            +  L  +    V   +  T  +  +G ++ +G  G  + G    G       P R+   
Sbjct: 312 LVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWG-DGTHNAGLLGHGTEVSHWIPKRVSGP 370

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           L    V  ++ G +H+ + T  G+LF FGD     LGH        P E+ I
Sbjct: 371 LEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQI 422



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 12/138 (8%)

Query: 339 LDSSGYVYTWGKGYC-GALGHGD------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           ++S G VY WG+ +C G L  G       +ID   P+ L S       Q+    R   ++
Sbjct: 223 IESLGDVYVWGEVWCDGVLPDGSVSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALV 282

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
              G V+ +G    G LG    G+ +   RP +++ L  ++V  ++ G YHT  V+  G 
Sbjct: 283 TRQGEVFTWGEESGGRLG---HGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGD 339

Query: 452 LFGFGD--NERAQLGHDT 467
           LF +GD  +    LGH T
Sbjct: 340 LFTWGDGTHNAGLLGHGT 357


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 135/271 (49%), Gaps = 10/271 (3%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4031 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4090

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++    +G H
Sbjct: 4091 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL--QGHH 4147

Query: 326  VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
            VV V+  +GD   + L     V++WG G  G LG G      +P  + SL     V+V  
Sbjct: 4148 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4207

Query: 384  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
              + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H 
Sbjct: 4208 GSQFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHC 4264

Query: 444  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 4265 VCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4295



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4103

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HHVVDVACGSGDAQTLC 4162

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4280

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 126/247 (51%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ HHV  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4043 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4101

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T
Sbjct: 4102 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHHVVDVACGSGDAQT 4160

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4161 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4219

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4220 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4277

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4278 DNDEGQLGDG 4287



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 358  HG 359
            +G
Sbjct: 3292 NG 3293



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 500 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 550

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDV 609

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 668

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 669 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 726

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 727 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4272

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 776



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2989 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3046

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3047 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3105

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3106 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3163

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3164 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3223

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3224 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3280

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3281 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3306



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2959 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3017

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3018 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3077

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3078 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3135

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3136 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3192

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3193 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3238



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4043 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4101

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4102 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4160

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4161 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4218

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4219 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4278

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4279 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4315



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 146/315 (46%), Gaps = 7/315 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3984 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTES-VSTPTLLESIQHVFIKK 4042

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +AAG 
Sbjct: 4043 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGG 4101

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  V   +GD   + L
Sbjct: 4102 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4161

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4162 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4221

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  ++ G ++ +GDN+
Sbjct: 4222 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4278

Query: 460  RAQLGHDTLRGCLEP 474
              QLG  T      P
Sbjct: 4279 EGQLGDGTTNAIQRP 4293



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4041 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGTEVVDVAA 4099

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T
Sbjct: 4100 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQT 4158

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4159 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4217

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4218 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCSEDGEVYTWG 4275

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4276 DNDEGQLGDG 4285



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4008

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4009 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4068

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4069 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4128

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4129 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4185

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4186 CKVPMKI 4192



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3055 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3113

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3114 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3172

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3173 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3231

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3232 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3289

Query: 358  HG 359
            +G
Sbjct: 3290 NG 3291



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 500 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 550

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 609

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 668

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 669 FSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 726

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 727 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3103 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3161

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3162 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3220

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3221 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3279

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3280 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3322



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4153 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4211

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4212 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4270

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4271 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4316



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3943 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4002

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4003 ADGKLYA---TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4059

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4060 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4086



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2960 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3016

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3017 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3073

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3074 DDGKLGHFSRMNCDKPRLI 3092


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4102

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4161

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4279

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 146/315 (46%), Gaps = 7/315 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3985 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTES-VSTPTLLESIQHVFIKK 4043

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +AAG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGG 4102

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  V   +GD   + L
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4162

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4163 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4222

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  ++ G ++ +GDN+
Sbjct: 4223 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4279

Query: 460  RAQLGHDTLRGCLEP 474
              QLG  T      P
Sbjct: 4280 EGQLGDGTTNAIQRP 4294



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGTEVVDVAA 4100

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T
Sbjct: 4101 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQT 4159

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4218

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4219 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCSEDGEVYTWG 4276

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4277 DNDEGQLGDG 4286



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 358  HG 359
            +G
Sbjct: 3292 NG 3293



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 500 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 550

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 609

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 668

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 669 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 726

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 727 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4271

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4003

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAV 379
            G  + R +AG E    + +   V+ WG      LG   G +I   +  E LS+L     V
Sbjct: 2942 GSLIRRKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VV 2996

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS- 437
            QV    +  F +   G VY  G    G LG    G+S   V  PR + +L ++ V +++ 
Sbjct: 2997 QVAGGSKSLFAVTVEGKVYACGEATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAV 3053

Query: 438  -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +G  H   +T  G++F +G+ +  +LGH +   C +P  I
Sbjct: 3054 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3094


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3048

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     V AG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDVAAGG 4103

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 4162

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4163 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4220

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4221 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4280

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4281 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 146/315 (46%), Gaps = 7/315 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3986 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTES-VSTPTLLESIQHVFIKK 4044

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +AAG 
Sbjct: 4045 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGT-EVVDVAAGG 4103

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   +  V   +GD   + L
Sbjct: 4104 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 4164 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 4223

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  ++ G ++ +GDN+
Sbjct: 4224 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDND 4280

Query: 460  RAQLGHDTLRGCLEP 474
              QLG  T      P
Sbjct: 4281 EGQLGDGTTNAIQRP 4295



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 738 DQCQ-HFDTLR 747



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4043 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGTEVVDVAA 4101

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T
Sbjct: 4102 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQT 4160

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4161 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4219

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4220 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCSEDGEVYTWG 4277

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4278 DNDEGQLGDG 4287



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 4010

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4011 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4070

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4071 DGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4130

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4131 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4187

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4188 CKVPMKI 4194



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3291

Query: 358  HG 359
            +G
Sbjct: 3292 NG 3293



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 500 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 550

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 609

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 668

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 669 FSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 726

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 727 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 3281

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSV 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPAQSFA 776



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4155 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4213

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       +  G 
Sbjct: 4214 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGE 4272

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4273 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4318



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3945 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4004

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4005 ADGKLYA---TGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4088



 Score = 45.4 bits (106), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3018

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4099 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4157

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4216

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4217 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4275 DNDEGQLGDG 4284



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 358  HG 359
            +G
Sbjct: 3291 NG 3292



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4098

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4099 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4157

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4216

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4217 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4274

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4275 DNDEGQLGDG 4284



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4185 CKVPMKI 4191



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290

Query: 358  HG 359
            +G
Sbjct: 3291 NG 3292



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085



 Score = 45.4 bits (106), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2279 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2336

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2337 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2395

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2396 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2453

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2454 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2513

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2514 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2570

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2571 GDNDHGQQGNGTTTVNRKPT--LVQGLE 2596



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2249 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2307

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2308 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2367

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2368 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2425

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2426 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2482

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2483 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2528



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3331 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3389

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3390 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3448

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3449 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3506

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3507 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3566

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3567 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3603



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3317 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3376

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3377 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3435

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3436 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3495

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3496 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3552

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3553 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3581



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 3329 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 3387

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 3388 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 3446

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 3447 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 3505

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 3506 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 3563

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 3564 DNDEGQLGDG 3573



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3296

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3297 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3356

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3357 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3416

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3417 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3473

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 3474 CKVPMKI 3480



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2345 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2403

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2404 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2462

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2463 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2521

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 2522 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 2579

Query: 358  HG 359
            +G
Sbjct: 2580 NG 2581



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2393 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2451

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2452 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2510

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 2511 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 2569

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2570 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2612



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3441 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3499

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3500 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3558

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3559 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3604



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3231 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3290

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3291 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3347

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3348 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3374



 Score = 45.4 bits (106), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2250 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 2306

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2307 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2363

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 2364 DDGKLGHFSRMNCDKPRLI 2382


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2930 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYMV 2987

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2988 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3046

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3047 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3104

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3105 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSG 3164

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3165 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3221

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3222 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3247



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2900 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2958

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   +   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2959 ATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3018

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 3019 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3076

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3077 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3133

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3134 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3179



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH  +  P  RPR++E+L+GV    V AG 
Sbjct: 3982 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH-GSRSPCDRPRVIESLRGVEVVDVAAGG 4040

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 4041 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4099

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4100 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4157

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4158 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4217

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4218 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4254



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG       P+ I  
Sbjct: 3968 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIES 4027

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  V  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4028 LRGV-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4086

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4087 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4146

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4147 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4203

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4204 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4232



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG  +  C     I       VV V+A
Sbjct: 3980 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSP-CDRPRVIESLRGVEVVDVAA 4038

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4039 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4097

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4098 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4156

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4157 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4214

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4215 DNDEGQLGDG 4224



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3947

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3948 ATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4007

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG       P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4008 DGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4067

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4068 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4124

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4125 CKVPMKI 4131



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2996 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3054

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3055 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3113

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 3114 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3172

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG    G  G
Sbjct: 3173 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3230

Query: 358  HG 359
            +G
Sbjct: 3231 NG 3232



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 137/309 (44%), Gaps = 20/309 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 384 VTQIACAEKRFLILSRNGCVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 432

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 433 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 492

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           Y  A+T  G +Y++G G+   L HG          I    R+              +A  
Sbjct: 493 YSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFY 552

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
            +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY +
Sbjct: 553 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSW 612

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N++
Sbjct: 613 GKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQ 669

Query: 461 AQLGHDTLR 469
            Q   DTLR
Sbjct: 670 CQ-HFDTLR 677



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 21/262 (8%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 433 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 488

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
               ++A +   G+++T G  +     H R     I    ++  L        + G+ F 
Sbjct: 489 CGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEIL--IMISGLDRQKFIYKSCGIRFA 546

Query: 230 GFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
             L     G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T 
Sbjct: 547 QTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTK 605

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++
Sbjct: 606 DGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHS 663

Query: 348 WGKGYCGALGHGDEIDKTLPEP 369
           WG        H D +  T PEP
Sbjct: 664 WGSN--DQCQHFDTLRVTKPEP 683



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 16/250 (6%)

Query: 162 SAAHVVQVSA-SENHAAFVLQ-SGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
           ++ ++V+++A S+ H    L  +G+V++  CGD      GH DT  P+  P+++ A  G 
Sbjct: 422 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDT-VPLEEPKVISAFSGK 478

Query: 218 PCKQ----VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
              +    +  G  ++  +T  G ++T G   + +L HG +        I+ L+    + 
Sbjct: 479 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIY 538

Query: 274 QIAAGPSY--MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           + + G  +   LA   NG V+S+G G    LG G       P+ I+    + + VV+V  
Sbjct: 539 K-SCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL--QDLDVVKVRC 595

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           G +  +AL   G VY+WGKG    LGHG E     P+ L  L+    + V A       L
Sbjct: 596 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 655

Query: 392 VDTGSVYGFG 401
            +   V+ +G
Sbjct: 656 TEDSEVHSWG 665



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3044 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3102

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3103 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 3161

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3162 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3220

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3221 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3263



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4092 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4150

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4151 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4209

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4210 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4255



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3882 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3941

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3942 ADGKLYA---TGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3998

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH +   C  P  I
Sbjct: 3999 EVYSWGEAEDGKLGHGSRSPCDRPRVI 4025



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 70/158 (44%), Gaps = 7/158 (4%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 188
           N  V+S G    G LG G  +  C +   I       VV+V      +  + + GQV++ 
Sbjct: 554 NGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSW 612

Query: 189 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
           G   +   GH  T   +  P+L+E L+G     V AG      LT    VH+ GSN   Q
Sbjct: 613 GKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671

Query: 249 LGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
             H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 672 --HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 706



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2901 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 2957

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2958 EATNGRLGL---GISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEG 3014

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3015 DDGKLGHFSRMNCDKPRLI 3033


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 2215 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 2272

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2273 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 2331

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 2332 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 2389

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 2390 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2449

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 2450 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2506

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 2507 GDNDHGQQGNGTTTVNRKPT--LVQGLE 2532



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 2185 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2243

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2244 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2303

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 2304 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 2361

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 2362 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2418

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2419 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2464



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 10/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3269 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3327

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 3328 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQG-HRVVDVACGSGDAQTLC 3386

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3387 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3444

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + GS Y +G   
Sbjct: 3445 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDND 3503

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3504 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3540



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 145/315 (46%), Gaps = 8/315 (2%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            +A   VQ+   E     V   G+++  G  +    G   T   +  P L+E+++ V  K+
Sbjct: 3210 AALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTES-VSTPTLLESIQHVFIKK 3268

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L  +  VV +AAG 
Sbjct: 3269 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGG 3327

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            ++   VT  G +Y++G G    LGH +  D+L+P+ +   +   +  V   +GD   + L
Sbjct: 3328 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCL 3387

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                 V++WG G  G LG G      +P  + SL     V+V    + +  L  +G+VY 
Sbjct: 3388 TDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYT 3447

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G  D V RPR +  L+   V  I+TG  H V  T+ G  + +GDN+
Sbjct: 3448 WGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS-YTWGDND 3503

Query: 460  RAQLGHDTLRGCLEP 474
              QLG  T      P
Sbjct: 3504 EGQLGDGTTNAIQRP 3518



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPV----QLIGGEQTLFAVTADGKLY 3234

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3235 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3294

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3295 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3354

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++D+L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3355 ---SEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3411

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 3412 CKVPMKI 3418



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 2281 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 2339

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 2340 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2398

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2399 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2457

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2458 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2515

Query: 358  HG 359
            +G
Sbjct: 2516 NG 2517



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 119/250 (47%), Gaps = 9/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 3267 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 3325

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LV+AL+G     V   +G   T
Sbjct: 3326 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVDALQGHRVVDVACGSGDAQT 3384

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 3385 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 3443

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G  YTWG
Sbjct: 3444 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGS-YTWG 3500

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 3501 DNDEGQLGDG 3510



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2329 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2387

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 2388 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 2446

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT  G VY+
Sbjct: 2447 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDAGQVYA 2505

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 2506 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 2548



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 19/205 (9%)

Query: 279  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQTFRRKGIHVVRVSAGDE 334
            P   L      +      G N  + H E HD    E   + +Q   R+          D+
Sbjct: 3121 PRLFLDEVAKKIRELMADGENMDVLH-ESHDIFRREQDEQLVQWMNRRP---------DD 3170

Query: 335  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
              ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F +   
Sbjct: 3171 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTAD 3230

Query: 395  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 452
            G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G +
Sbjct: 3231 GKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3287

Query: 453  FGFGDNERAQLGHDTLRGCLEPTEI 477
            + +G+ E  +LGH     C  P  I
Sbjct: 3288 YSWGEAEDGKLGHGNRSPCDRPRVI 3312



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 5/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3379 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3437

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3438 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGS 3496

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
             +T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3497 -YTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3541



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2186 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 2242

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2243 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2299

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 2300 DDGKLGHFSRMNCDKPRLI 2318


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 161/350 (46%), Gaps = 31/350 (8%)

Query: 141 GVLGHGPETTQCVSFTRIN--FPSAAH------VVQVSASENHAAFVLQSGQVFTCGDNS 192
           G++G G       S T+I+   P A        V  ++    HA  V + G+VF+ G+  
Sbjct: 261 GIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEEC 320

Query: 193 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLG 250
               GH      +  P+L++AL G+  + V  G   +  +T+ G ++T G  TH  G LG
Sbjct: 321 GSRLGH-GVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLG 379

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 310
           HG       PK ++   E   V  +A GP +   VT  G +++FG G+   LGHG+    
Sbjct: 380 HGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSM 439

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVAL---------------DSSGYVYTWGKGYCGA 355
             PR ++  R  G   +RV+ G  H  A+                SSG ++TWG G  G 
Sbjct: 440 SIPREVEALR--GQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGR 497

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LGHGD+  + +P+ +++L +    QV      +  L  +G VY  G   +G LG P   V
Sbjct: 498 LGHGDKEPRLVPQSVTALINESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSP---V 554

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           +D  +   +   +    V +++ G YH  V+T +  ++ +G     QLGH
Sbjct: 555 ADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGH 604



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 128/281 (45%), Gaps = 32/281 (11%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YH+  ++ S     +  G+   G+LGHG E +  +   +++ P    HV  V+  
Sbjct: 349 VACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIP-KKVSGPMEGMHVSYVACG 407

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD +    GH D +  +  PR VEAL+G    +V  G+  T  +
Sbjct: 408 PWHTAVVTSAGQLFTFGDGTFGALGHGD-HSSMSIPREVEALRGQRTMRVACGVWHTAAV 466

Query: 233 T---------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
                             G + T G    G+LGHGD   R  P+S+  L    S  Q+A 
Sbjct: 467 VELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINE-SFCQVAC 525

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLG----HGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
           G +  +A+T +G VY+ GS     LG     G+    ++ +   +F      V  V+ G 
Sbjct: 526 GHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANSF------VEEVACGS 579

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            HV  L S   VYTWGKG  G LGHGD   +  P  +  LK
Sbjct: 580 YHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLK 620



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 32/259 (12%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           VH  GS++  ++      D   PK++     V  V  IA G  + + VT  G V+S+G  
Sbjct: 267 VHRVGSSSSTKI------DALLPKALESTV-VLDVHSIACGGKHAVLVTKKGEVFSWGEE 319

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGA 355
               LGHG + D   P+ I      G+++  V+ G+ H  A+  SG +YTWG G    G 
Sbjct: 320 CGSRLGHGVEVDVSHPKLIDAL--CGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGL 377

Query: 356 LGHGDEIDKTLPEPLSSLKS--HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           LGHG E    +P+ +S      H++   C     T V+   G ++ FG   FG+LG  D 
Sbjct: 378 LGHGSEASHWIPKKVSGPMEGMHVSYVACG-PWHTAVVTSAGQLFTFGDGTFGALGHGDH 436

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD---------------RGRLFGFGDN 458
                +  PR +++LR     +++ G++HT  V +                G+LF +GD 
Sbjct: 437 S---SMSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDG 493

Query: 459 ERAQLGHDTLRGCLEPTEI 477
           ++ +LGH      L P  +
Sbjct: 494 DKGRLGHGDKEPRLVPQSV 512



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 19/283 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +    +  G      +T +G V + G     +LGHG  +D   PK I  L 
Sbjct: 283 PKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALC 342

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 325
            + ++  +A G  +  AVT +G +Y++G G++    LGHG +     P+ + +   +G+H
Sbjct: 343 GM-NIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKV-SGPMEGMH 400

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  V+ G  H   + S+G ++T+G G  GALGHGD    ++P  + +L+    ++V    
Sbjct: 401 VSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGV 460

Query: 386 RKTFVLVD-------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
             T  +V+             + S   F W G G  G    G  +  L P+ + +L    
Sbjct: 461 WHTAAVVELMIASSSFESSGSSSSGKLFTW-GDGDKGRLGHGDKEPRLVPQSVTALINES 519

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             Q++ G   +V +T  GR++  G     QLG     G + PT
Sbjct: 520 FCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKI-PT 561



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 143/347 (41%), Gaps = 28/347 (8%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 178
           G++  L+     VFS G      LGHG E    VS  + I+     ++  V+  E H+  
Sbjct: 301 GKHAVLVTKKGEVFSWGEECGSRLGHGVEVD--VSHPKLIDALCGMNIELVACGEYHSCA 358

Query: 179 VLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
           V  SG ++T GD  ++S   GH          ++   ++G+    V  G   T  +T  G
Sbjct: 359 VTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAG 418

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVVQ--IAAGPSYM 282
            + T G  T G LGHGD      P+ +  L                +VV+  IA+     
Sbjct: 419 QLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFES 478

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
              + +G ++++G G    LGHG++   L P+++     +     +V+ G    VAL +S
Sbjct: 479 SGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESF--CQVACGHNLSVALTTS 536

Query: 343 GYVYTWGKGYCGALGH--GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           G VYT G    G LG    D    TL E    + +    +V        VL     VY +
Sbjct: 537 GRVYTMGSAVYGQLGSPVADGKIPTLVE--GKIANSFVEEVACGSYHVAVLTSKTEVYTW 594

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           G    G LG  D   +D    P ++D L+   V  +  GL  T  ++
Sbjct: 595 GKGTNGQLGHGD---NDHRNTPTLVDFLKDKQVKNVVCGLNFTAAIS 638



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 19/227 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G +HT +++++  +F+ G    G LGHG  ++  +    +        ++V+    H
Sbjct: 404 VACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIP-REVEALRGQRTMRVACGVWH 462

Query: 176 AAFVLQ---------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
            A V++               SG++FT GD      GH D   P   P+ V AL      
Sbjct: 463 TAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGD-KEPRLVPQSVTALINESFC 521

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           QV  G N +  LT  G V+T GS  +GQLG     D   P  +        V ++A G  
Sbjct: 522 QVACGHNLSVALTTSGRVYTMGSAVYGQLG-SPVADGKIPTLVEGKIANSFVEEVACGSY 580

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           ++  +T    VY++G G+N  LGHG+      P  +   + K +  V
Sbjct: 581 HVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNV 627



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 15/220 (6%)

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI 127
           H  ++ MS   ++E L       +R +R    V H++ +VE      M  ++    +   
Sbjct: 433 HGDHSSMSIPREVEALRG-----QRTMRVACGVWHTAAVVEL-----MIASSSFESSGSS 482

Query: 128 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
           S+  +F+ G    G LGHG +  + V  +     + +   QV+   N +  +  SG+V+T
Sbjct: 483 SSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINES-FCQVACGHNLSVALTTSGRVYT 541

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
            G       G    +  I  P LVE  +     ++V  G      LT +  V+T G  T+
Sbjct: 542 MGSAVYGQLGSPVADGKI--PTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTN 599

Query: 247 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           GQLGHGD   R TP  +  L++   V  +  G ++  A++
Sbjct: 600 GQLGHGDNDHRNTPTLVDFLKD-KQVKNVVCGLNFTAAIS 638



 Score = 41.6 bits (96), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L ++  V++ GS++ G LG      +  +       ++  V +V+    H A +    +V
Sbjct: 533 LTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANS-FVEEVACGSYHVAVLTSKTEV 591

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV----HTC 241
           +T G  ++   GH D N     P LV+ LK    K V  GLNFT  +++   V    H+ 
Sbjct: 592 YTWGKGTNGQLGHGD-NDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLHKWVSCADHSI 650

Query: 242 GSNTHGQLG 250
            S  H Q G
Sbjct: 651 CSGCHNQFG 659


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 133/245 (54%), Gaps = 8/245 (3%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G ++ CG  T+G+LG G   + PTP+ +  L + V   V + +G  + +A+T +G V+S+
Sbjct: 2959 GKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSW 3018

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G +  LGHG +    +P+ +++ R K I    ++ G  H  A+ SSG +YTWG G  G
Sbjct: 3019 GEGEDGKLGHGNRVTLEKPKLLESLRTKRIR--DIACGSSHSAAITSSGELYTWGLGEYG 3076

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             LGHGD   +  P+ +++L+ H  VQV   +R  +T  L + G V+ +G   FG LG   
Sbjct: 3077 RLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG--- 3133

Query: 413  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            RG S+    P  ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH T +   
Sbjct: 3134 RGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVR 3193

Query: 473  EPTEI 477
            +PT I
Sbjct: 3194 KPTPI 3198



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 150/312 (48%), Gaps = 20/312 (6%)

Query: 154 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 213
           S   I  P +  V QV+ +EN    V  SGQ+++     S C            P+LVE 
Sbjct: 524 STATIELPPSLQVRQVACTENSIYIVTTSGQLYSI---HSSCA-------ETVAPKLVEG 573

Query: 214 LKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
           L+GV   Q+ A         L+  G V++ G+   G+LGHGDT  +  P  IA LE+   
Sbjct: 574 LEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIA-LEK--Q 630

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I AG SY  AV+  G ++++G G+   LGHG   D+  P  +Q  +   +  V + +
Sbjct: 631 VTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGS 690

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           GD H +A+   G ++ WG G  G LG+G      LP  +  + S    ++ +  + +  L
Sbjct: 691 GDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSS--VARIYSGSQFSVAL 748

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
              G++Y +G    G LG    G S+    P+++ +L    +  ++ G  H + +T  G 
Sbjct: 749 SYDGTLYSWGKGHGGRLG---HGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGE 805

Query: 452 LFGFGDNERAQL 463
           L+G+G N+  Q+
Sbjct: 806 LYGWGRNDYQQI 817



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 148/321 (46%), Gaps = 21/321 (6%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 207
            +++  P+ + V      + +S        V Q G+++ CG+  N     GH   N  +  
Sbjct: 2926 SKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACGEGTNGRLGLGH---NNNVPT 2982

Query: 208  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            PR V  L     K+V   +G      LT+ G V + G    G+LGHG+ +    PK +  
Sbjct: 2983 PRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLES 3042

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L     +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ +     +G  
Sbjct: 3043 LR-TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTAL--QGHR 3099

Query: 326  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
            VV+V+ G  D   + L   G V++WG G  G LG G     ++P  +  L     VQ+  
Sbjct: 3100 VVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIEC 3159

Query: 384  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
              + +  L   G V+ +G   +  LG    G    V +P  +  LR   V  ++ G  H 
Sbjct: 3160 GAQFSLALTKIGEVWTWGKGDYYRLG---HGTDQHVRKPTPIQGLRGKKVIHVAVGALHC 3216

Query: 444  VVVTDRGRLFGFGDNERAQLG 464
            + VTD G++F +GDN+  Q G
Sbjct: 3217 LAVTDSGQVFAWGDNDHGQQG 3237



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 147/324 (45%), Gaps = 40/324 (12%)

Query: 185  VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            +F  G N     G  D +R I  P   EAL  +   Q+  G      +T  G ++  G  
Sbjct: 3946 IFGWGHNHRGQLGGLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004

Query: 245  THGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
              G+LG G T    TP  +  L+ V    V + +G  + LA++ +G V+S+G G +  LG
Sbjct: 4005 AGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4064

Query: 304  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
            HG +    +P+ I+     GI VV ++ G  H   + S G+V TWGKG  G LGHGD  D
Sbjct: 4065 HGNRDSYDRPKLIEAL--SGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSED 4122

Query: 364  KTLPEP------------LSSLKSHLAVQVCARKRK---------------------TFV 390
            +  P+             ++++ + LA +V    R                      +  
Sbjct: 4123 QLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVA 4182

Query: 391  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
            L  +GSVY +G   +  LG    G +D V RP+ + +L+   +  I+TG  H V  +D G
Sbjct: 4183 LTRSGSVYTWGKGDYHRLG---HGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSG 4239

Query: 451  RLFGFGDNERAQLGHDTLRGCLEP 474
             +F +GDN+  QLG  T+     P
Sbjct: 4240 EVFTWGDNDEGQLGDGTVTAIQRP 4263



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 148/333 (44%), Gaps = 48/333 (14%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +RI  P+          +Q++  E     V   G+++  G  +    G   T+  +  P 
Sbjct: 3963 SRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAGGRLGIGGTDS-VSTPT 4021

Query: 210  LVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAP 265
            LVE+L+ V  K+V   +G      L+  G V + G    G+LGHG  D+ DRP  K I  
Sbjct: 4022 LVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRP--KLIEA 4079

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR----------- 314
            L  +G VV IA G ++   +T  G V ++G G    LGHG+  D+LQP+           
Sbjct: 4080 LSGIG-VVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCG 4138

Query: 315  --------------------AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
                                 ++     G+ V++V  G +  VAL  SG VYTWGKG   
Sbjct: 4139 VGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYH 4198

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+      P+ +++L+    + +           D+G V+ +G    G LG    G
Sbjct: 4199 RLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLG---DG 4255

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
                + RPR++ SL+  H+ ++  G  HT+ ++
Sbjct: 4256 TVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4288



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 156/344 (45%), Gaps = 31/344 (9%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 166
            + I+ G     ++S +  +++CG    G LG G            N P+   V       
Sbjct: 2943 IHISGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNN---------NVPTPRQVPILNQYV 2993

Query: 167  ---VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQV 222
               V V +   HA  +   G+VF+ G+      GH   NR    +P+L+E+L+    + +
Sbjct: 2994 VKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGH--GNRVTLEKPKLLESLRTKRIRDI 3051

Query: 223  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--S 280
              G + +  +T  G ++T G   +G+LGHGD   +  PK +  L+    VVQ+A G   +
Sbjct: 3052 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQG-HRVVQVACGSRDA 3110

Query: 281  YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
              L +T  G+V+S+G G    LG G       P  ++  R  G+ VV++  G +  +AL 
Sbjct: 3111 QTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVE--RLNGVGVVQIECGAQFSLALT 3168

Query: 341  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
              G V+TWGKG    LGHG +     P P+  L+    + V         + D+G V+ +
Sbjct: 3169 KIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAW 3228

Query: 401  GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
            G    G  G  +  V+ K   P ++  L    V++++ G  H+V
Sbjct: 3229 GDNDHGQQGSGNTVVNKK---PNLVLGLDGVFVNRVACGSSHSV 3269



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 234  IRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            I   V   G N   QLG   G  +  PT  S+  L ++  +  I+ G   +  V+ +G +
Sbjct: 2905 ISSKVLVWGLNDKEQLGGLKGSKVKLPTYSSV--LSQLKPI-HISGGSKSLFIVSQDGKL 2961

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            Y+ G G+N  LG G  ++   PR +    +  +  V V +G +H +AL   G V++WG+G
Sbjct: 2962 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG 3021

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
              G LGHG+ +    P+ L SL++     +      +  +  +G +Y +G   +G LG  
Sbjct: 3022 EDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3081

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
            D       L+P+++ +L+ H V Q++ G     T+ +T+ G +F +GD +  +LG     
Sbjct: 3082 DNCTQ---LKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSE 3138

Query: 470  GCLEPTEI 477
            GC  P ++
Sbjct: 3139 GCSVPHQV 3146



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 11/233 (4%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+   L S   V+S G+   G LGHG   ++ V  T+I       V  + A  +++A V
Sbjct: 588 GRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVP-TKIAL--EKQVTAIYAGASYSAAV 644

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 237
              G++FT G  +    GH +++   F P  V+ALK      V   +G   +  +T  G 
Sbjct: 645 SSVGELFTWGRGTYGRLGHGNSDDK-FVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGL 703

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           +   G    G+LG+G     P P  I   E V SV +I +G  + +A++ +G +YS+G G
Sbjct: 704 LFAWGDGDFGKLGNGSCNGSPLPVQI---EGVSSVARIYSGSQFSVALSYDGTLYSWGKG 760

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
               LGHG       P+ +     +G  +V V+ G  H +AL SSG +Y WG+
Sbjct: 761 HGGRLGHGNSEHSNVPKLVHAL--EGKKIVDVAVGSAHCLALTSSGELYGWGR 811



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 20/210 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V Q+A   + +  VT +G +YS          H    + + P+ ++    +G+ V++++A
Sbjct: 536 VRQVACTENSIYIVTTSGQLYSI---------HSSCAETVAPKLVEGL--EGVSVIQIAA 584

Query: 332 GDE--HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
             E  H +AL S+G VY+WG G  G LGHGD   K +P  ++  K   A+   A    + 
Sbjct: 585 HCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYAGASY--SA 642

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVT 447
            +   G ++ +G   +G LG    G SD    P  + +L+A+ V  ++  +G  H++ VT
Sbjct: 643 AVSSVGELFTWGRGTYGRLG---HGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVT 699

Query: 448 DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           D G LF +GD +  +LG+ +  G   P +I
Sbjct: 700 DGGLLFAWGDGDFGKLGNGSCNGSPLPVQI 729



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 114/265 (43%), Gaps = 43/265 (16%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L S+  VFS G    G LGHG       S+ R   I   S   VV 
Sbjct: 4032 KKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRD----SYDRPKLIEALSGIGVVD 4087

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT------NRPIFR--------------- 207
            ++    H+A +   G V T G       GH D+       R + R               
Sbjct: 4088 IACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMAS 4147

Query: 208  -----------PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 256
                       P  +E+L G+   +V  G  F+  LT  G V+T G   + +LGHG+T  
Sbjct: 4148 LAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDH 4207

Query: 257  RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 316
               PK +A L+    ++ IA G  + +A + +G V+++G      LG G      +PR +
Sbjct: 4208 VRRPKKVAALQG-KKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLV 4266

Query: 317  QTFRRKGIHVVRVSAGDEHVVALDS 341
            Q+   +G H+V+V  G  H +AL +
Sbjct: 4267 QSL--QGKHIVKVICGSAHTLALST 4289


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 151/316 (47%), Gaps = 24/316 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 224
           V  ++    HAA V + G+VF+ G  S    GH  D++ P   P+L+E+L     + V  
Sbjct: 307 VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVP--HPKLIESLSNTNIELVAC 364

Query: 225 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSY 281
           G   T  +T+ G ++T G  T+  G LGHG+ +    PK +  PLE +  V  I+ GP +
Sbjct: 365 GEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGI-HVSSISCGPWH 423

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-- 339
              VT +G +++FG G+   LGHG++     PR I++   KG+  V+ + G  H  A+  
Sbjct: 424 TAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESL--KGLRTVQAACGVWHTAAVVE 481

Query: 340 ----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
                      SSG ++TWG G  G LGHGD+  K +P  + +L      QV      T 
Sbjct: 482 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTV 541

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            L   G VY  G   +G LG      +D  L   +   L    V +I+ G YH  V+T R
Sbjct: 542 ALSRLGHVYTMGSCVYGHLG---NTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSR 598

Query: 450 GRLFGFGDNERAQLGH 465
             +F +G      LGH
Sbjct: 599 TEVFTWGKGANGCLGH 614



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 134/291 (46%), Gaps = 21/291 (7%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFT 156
           V H   I   S  N   +  G YHT  ++ S     +  G+   G+LGHG + +  V   
Sbjct: 345 VPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP-K 403

Query: 157 RINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           R+N P    HV  +S    H A V  SGQ+FT GD +    GH D  + +  PR +E+LK
Sbjct: 404 RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGD-RKSVSLPREIESLK 462

Query: 216 GVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           G+   Q   G+  T  +               G + T G    G+LGHGD   +  P  +
Sbjct: 463 GLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRV 522

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             L+E  +  Q+A G S  +A++  G VY+ GS     LG+  Q D   P  ++    K 
Sbjct: 523 VTLDEP-NFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGN-TQADGKLPTPVEGKLSKS 580

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V  ++ G  HV  L S   V+TWGKG  G LGHGD  D+  P  + +LK
Sbjct: 581 F-VEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALK 630



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 137/296 (46%), Gaps = 27/296 (9%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +  + +  G      +T +G V + G  + G+LGHG   D P PK I  L 
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLS 355

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT +G +Y++G G+ N+  LGHG Q     P+ +     +GIH
Sbjct: 356 NT-NIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNG-PLEGIH 413

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + SSG ++T+G G  G LGHGD    +LP  + SLK    VQ     
Sbjct: 414 VSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGV 473

Query: 386 RKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+             G ++ +G    G LG  D+   +  L P  + +L   + 
Sbjct: 474 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---ESKLVPTRVVTLDEPNF 530

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 482
            Q++ G   TV ++  G ++  G      LG+    G L PT +       F++E+
Sbjct: 531 CQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKL-PTPVEGKLSKSFVEEI 585



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 3/134 (2%)

Query: 106 IVETSAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           +V     N  Q+  G   T+ +S    V++ GS + G LG+     +  +       S +
Sbjct: 522 VVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLPTPVEGKL-SKS 580

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            V +++    H A +    +VFT G  ++ C GH DTN     P LVEALK    K +  
Sbjct: 581 FVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTND-RNTPTLVEALKDKQVKSIAC 639

Query: 225 GLNFTGFLTIRGHV 238
           G NFT  + +   V
Sbjct: 640 GTNFTAAICLHKWV 653


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 166/348 (47%), Gaps = 12/348 (3%)

Query: 131  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
            +++  G +  G LG G E  +    T I   ++   +Q+   E     V   G+++  G 
Sbjct: 3182 TIYGWGHNHRGQLG-GIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGY 3240

Query: 191  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQ 248
             +S   G   T+  +  P L+E+++ V  K+V   +G      L++ G V++ G    G+
Sbjct: 3241 GASGRLGIGGTDS-VSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGK 3299

Query: 249  LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
            LGHG+      P+ I  L     V+ IA G ++   VT +G +Y++G G    LGHG+  
Sbjct: 3300 LGHGNRTQCDRPRVIESLRG-KEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSE 3358

Query: 309  DELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
            D+L+P+       KG  V+ V+  +GD   + +     V++WG G  G LG G      +
Sbjct: 3359 DQLRPKMADAL--KGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKV 3416

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P+ + +L S    +V    + +  L  +G VY +G   +  LG    G  D V RPR + 
Sbjct: 3417 PQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLG---HGSDDHVRRPRKVA 3473

Query: 427  SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +L+   +  I+TG  H V  +D+G ++ +GDN+  QLG  T      P
Sbjct: 3474 ALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRP 3521



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 150/303 (49%), Gaps = 10/303 (3%)

Query: 168  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            Q SA ++  +  +Q+ +VF  G N     G    ++ I  P L E L  +       G  
Sbjct: 2192 QRSAGDHGGSREIQT-KVFVWGLNDKDQLGGPRGSK-IKTPVLNEFLSSLKVVCCAGGSK 2249

Query: 228  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVT 286
                +T  G V+ CG  T+G+LG G + +   PK +  L + V   V + +G  + +A+T
Sbjct: 2250 SLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALT 2309

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G V+S+G G +  LGH  + +  +PR ++  + K I    ++ G  H  A+ SSG +Y
Sbjct: 2310 VDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIR--DIACGSSHSAAVTSSGELY 2367

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMG 404
            TWG G  G LGHGD   +  P+ + +L     +QV   +R  +T  L D G VY +G   
Sbjct: 2368 TWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGD 2427

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            FG LG   RG S+    P  ++ L    V QI  G   ++ +T  G+++ +G  +  +LG
Sbjct: 2428 FGKLG---RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLG 2484

Query: 465  HDT 467
            H T
Sbjct: 2485 HGT 2487



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 156/338 (46%), Gaps = 8/338 (2%)

Query: 129  NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 188
             + VF  G +    LG GP  ++  +     F S+  VV  +        V   G+V+ C
Sbjct: 2205 QTKVFVWGLNDKDQLG-GPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYAC 2263

Query: 189  GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTH 246
            G+ ++   G   +++ +  P+ V  L     K+V   +G      LT+ G V + G    
Sbjct: 2264 GEGTNGRLG-LGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 2322

Query: 247  GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            G+LGH   ++   P+ +  L+    +  IA G S+  AVT +G +Y++G G    LGHG+
Sbjct: 2323 GKLGHLSRMNCEKPRLLEALK-TKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGD 2381

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
               +L+P+ ++    K +  V   + D   + L   G VY+WG G  G LG G     ++
Sbjct: 2382 STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSV 2441

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P  +  L     +Q+    + +  L   G V+ +G   +  LG    G    V +P++ +
Sbjct: 2442 PHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLG---HGTDSHVRKPQVAE 2498

Query: 427  SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             L+   +  ++ G  H + VTD G++F +GDN+  Q G
Sbjct: 2499 GLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQG 2536



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 17/338 (5%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQV 169
            +QI  G      ++ +  +++ G    G LG G   T  VS T     S  HV    V V
Sbjct: 3217 IQIVGGEQTLFAVTADGKLYATGYGASGRLGIG--GTDSVS-TPTLLESIQHVHIKKVAV 3273

Query: 170  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
            ++   HA  +   G+V++ G+      GH +  +   RPR++E+L+G     +  G   +
Sbjct: 3274 NSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQ-CDRPRVIESLRGKEVIDIACGGAHS 3332

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTG 287
              +T  G ++T G   +G+LGHGD+ D+  PK    L+    V+ +A  +G S  L ++ 
Sbjct: 3333 ACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGY-RVIDVACGSGDSQTLCISD 3391

Query: 288  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            +  V+S+G G    LG G       P+ +       I V +V  G +  +AL  SG VYT
Sbjct: 3392 DDNVWSWGDGDYGKLGRGGSDGCKVPQKVDAL--SSIGVCKVECGSQFSIALTKSGCVYT 3449

Query: 348  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
            WGKG    LGHG +     P  +++L+    + +           D G VY +G    G 
Sbjct: 3450 WGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQ 3509

Query: 408  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            LG    G ++ + RPRI+ +L+   ++ ++ G  HTV 
Sbjct: 3510 LG---DGTTNAIQRPRIVTALQDKKITNVACGSAHTVA 3544



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 154/325 (47%), Gaps = 16/325 (4%)

Query: 125  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VSASENHAAFVLQ 181
            ++ +   V++CG    G LG G  ++Q V   +     + +VV+   V +   HA  +  
Sbjct: 2253 VVTAEGKVYACGEGTNGRLGLG--SSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTV 2310

Query: 182  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
             G+VF+ G+      GH  +     +PRL+EALK    + +  G + +  +T  G ++T 
Sbjct: 2311 DGKVFSWGEGDDGKLGHL-SRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTW 2369

Query: 242  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGS 298
            G   +G+LGHGD+  +  PK +  L  VG  V+Q+A G   +  L +T  G+VYS+G G 
Sbjct: 2370 GLGEYGRLGHGDSTTQLRPKLVKAL--VGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGD 2427

Query: 299  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
               LG G       P  ++  R  G  V+++  G +  +AL  +G V+TWGKG    LGH
Sbjct: 2428 FGKLGRGGSEGCSVPHNVE--RLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGH 2485

Query: 359  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
            G +     P+    LK    + V         + DTG V+ +G    G  G     V+ K
Sbjct: 2486 GTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKK 2545

Query: 419  VLRPRILDSLRAHHVSQISTGLYHT 443
               P ++  L    +++++ G  H+
Sbjct: 2546 ---PALVQGLEGVRITRVACGSSHS 2567



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G ++  G N  GQLG  +      P +I  L  +   +QI  G   + AVT +G +Y+ G
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSL-RPIQIVGGEQTLFAVTADGKLYATG 3239

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G++  LG G       P  +++ +   I  V V++G +H +AL   G VY+WG+G  G 
Sbjct: 3240 YGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGK 3299

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+      P  + SL+    + +      +  +  +G +Y +G   +G LG  D   
Sbjct: 3300 LGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGD--- 3356

Query: 416  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            S+  LRP++ D+L+ + V  ++  +G   T+ ++D   ++ +GD +  +LG     GC  
Sbjct: 3357 SEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKV 3416

Query: 474  PTEI 477
            P ++
Sbjct: 3417 PQKV 3420



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 130/293 (44%), Gaps = 19/293 (6%)

Query: 113  NQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S    V+S G    G LGHG   TQC     I       V+ ++ 
Sbjct: 3269 KKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHG-NRTQCDRPRVIESLRGKEVIDIAC 3327

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
               H+A V  SG+++T G       GH D+   + RP++ +ALKG     V  G   +  
Sbjct: 3328 GGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQL-RPKMADALKGYRVIDVACGSGDSQT 3386

Query: 232  LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
            L I    +V + G   +G+LG G +     P+ +  L  +G V ++  G  + +A+T +G
Sbjct: 3387 LCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIG-VCKVECGSQFSIALTKSG 3445

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +     +G  ++ ++ G  H VA    G VYTWG
Sbjct: 3446 CVYTWGKGDYHRLGHGSDDHVRRPRKVAAL--QGKKIISIATGSLHCVACSDQGEVYTWG 3503

Query: 350  KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
                G LG G       P  +++L+            K    V  GS +   W
Sbjct: 3504 DNDEGQLGDGTTNAIQRPRIVTALQD-----------KKITNVACGSAHTVAW 3545



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  VFS G    G LGH      C     +       +  ++   +H+A V
Sbjct: 2302 GRHAMALTVDGKVFSWGEGDDGKLGH-LSRMNCEKPRLLEALKTKRIRDIACGSSHSAAV 2360

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 237
              SG+++T G       GH D+   + RP+LV+AL G    QV  G      LT+   G 
Sbjct: 2361 TSSGELYTWGLGEYGRLGHGDSTTQL-RPKLVKALVGKRVIQVACGSRDAQTLTLTDEGM 2419

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V++ G    G+LG G +     P ++  L   G V+QI  G  + LA+T  G V+++G G
Sbjct: 2420 VYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQG-VIQIECGAQFSLALTKAGQVWTWGKG 2478

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+  +    KG  ++ V+ G  H +A+  +G V+ WG    G  G
Sbjct: 2479 DYFRLGHGTDSHVRKPQVAEGL--KGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQG 2536

Query: 358  HG 359
             G
Sbjct: 2537 DG 2538



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 120/262 (45%), Gaps = 17/262 (6%)

Query: 220  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQI-- 275
            +Q +AG +  G   I+  V   G N   QLG   G  +  P       L E  S +++  
Sbjct: 2191 RQRSAG-DHGGSREIQTKVFVWGLNDKDQLGGPRGSKIKTPV------LNEFLSSLKVVC 2243

Query: 276  -AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
             A G   +  VT  G VY+ G G+N  LG G   +   P+ +    +  +  V V +G  
Sbjct: 2244 CAGGSKSLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGR 2303

Query: 335  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
            H +AL   G V++WG+G  G LGH   ++   P  L +LK+     +      +  +  +
Sbjct: 2304 HAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSS 2363

Query: 395  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRL 452
            G +Y +G   +G LG  D   S   LRP+++ +L    V Q++ G     T+ +TD G +
Sbjct: 2364 GELYTWGLGEYGRLGHGD---STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMV 2420

Query: 453  FGFGDNERAQLGHDTLRGCLEP 474
            + +GD +  +LG     GC  P
Sbjct: 2421 YSWGDGDFGKLGRGGSEGCSVP 2442



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P  + SL S   +Q+   ++  F + 
Sbjct: 3171 DDWTLSWGGSGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVT 3230

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y  G+   G LG    G +D V  P +L+S++  H+ +++  +G  H + ++  G
Sbjct: 3231 ADGKLYATGYGASGRLGI---GGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEG 3287

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3288 EVYSWGEGEDGKLGHGNRTQCDRPRVI 3314



 Score = 45.4 bits (106), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 3/97 (3%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D+L P+ +   + +    + + + D   +A+  +G ++++G G  G LG G      LP+
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPK 63

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVY---GFGW 402
            +  L+   AV  C   + + +L  TG+VY    F W
Sbjct: 64  LVDKLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAW 100



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 5/94 (5%)

Query: 256 DRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 313
           D+ TPK ++ L+E    V IA G +    LAVT  G+++SFG+G    LG G       P
Sbjct: 4   DQLTPKLVSGLKE-QKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLP 62

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           + +     +G H V    G++  V L  +G VYT
Sbjct: 63  KLVDKL--QGQHAVIACCGNQFSVILTKTGTVYT 94



 Score = 42.0 bits (97), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 363 DKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           D+  P+ +S LK    V +   +   +T  + DTG ++ FG   +G LG   RG SD   
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLG---RGGSDGCK 60

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            P+++D L+  H      G   +V++T  G ++
Sbjct: 61  LPKLVDKLQGQHAVIACCGNQFSVILTKTGTVY 93


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 155/311 (49%), Gaps = 9/311 (2%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           ++++  A  + + +   +H   +   G++++CG+N     GH   + P  RP+L+ AL+ 
Sbjct: 340 KMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALEN 399

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQI 275
               Q   G   +  LT  G V++ GSN  GQLG   DT  +  P+ I  +     VVQI
Sbjct: 400 YIITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSI-AAKQVVQI 458

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDE 334
           AAG  + LA+T +G +Y++GS +   LG G  ++++  P  +Q+    G+ +  ++ G  
Sbjct: 459 AAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSL--AGVPIAFIACGGN 516

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H  A+  SG ++ WGK   G LG  D   +  P  L +L+S     V      +  L   
Sbjct: 517 HSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAG 576

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 453
           G V+  G   FG LG    G  +  + PR++  L    ++QI+ G  HT+  V  RG+++
Sbjct: 577 GGVFTCGAGTFGQLG---HGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 633

Query: 454 GFGDNERAQLG 464
           GFG +   QLG
Sbjct: 634 GFGLSGVGQLG 644



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 152/323 (47%), Gaps = 14/323 (4%)

Query: 120 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           G  HTLL++N   ++SCG++  G LGH  E+        +       + Q      H+  
Sbjct: 355 GASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHSLA 414

Query: 179 VLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
           +   GQV++ G N+    G   DT R I  PRL+ ++      Q+ AG      LT  G 
Sbjct: 415 LTNWGQVYSWGSNAVGQLGQETDTTRQII-PRLIRSIAAKQVVQIAAGHYHCLALTNSGE 473

Query: 238 VHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
           ++  GSN +GQLG G T ++  TP  +  L  V  +  IA G ++  AV+ +G ++ +G 
Sbjct: 474 LYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGV-PIAFIACGGNHSFAVSKSGAIFGWGK 532

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
            +   LG  + +    P  ++T R  G+    VS GD+  V L + G V+T G G  G L
Sbjct: 533 NTFGQLGLNDLNSRQFPTQLRTLRSLGVRY--VSCGDDFSVFLTAGGGVFTCGAGTFGQL 590

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSLGFPDRGV 415
           GHG   ++ LP  +  L      Q+   +R T   V + G +YGFG  G G LG    G+
Sbjct: 591 GHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGI---GI 647

Query: 416 SDKVLRPRILDSLRAHHVSQIST 438
                 P+I   +R    SQI T
Sbjct: 648 VGNYNTPQI---VRGPWQSQILT 667



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 135/277 (48%), Gaps = 9/277 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSI 263
           +  PR ++ +      +   G + T  LT  G +++CG+N HGQLGH  ++L    P+ +
Sbjct: 335 VMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLL 394

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRK 322
             LE    + Q   G ++ LA+T  G VYS+GS +   LG   +   ++ PR I++   K
Sbjct: 395 TALENY-IITQACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAK 453

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQV 381
              VV+++AG  H +AL +SG +Y WG    G LG G   +K + P  + SL       +
Sbjct: 454 --QVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFI 511

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
                 +F +  +G+++G+G   FG LG  D         P  L +LR+  V  +S G  
Sbjct: 512 ACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQ---FPTQLRTLRSLGVRYVSCGDD 568

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            +V +T  G +F  G     QLGH +    + P  +F
Sbjct: 569 FSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVF 605



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 5/246 (2%)

Query: 116 QITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q   G  H+L ++N   V+S GS+  G LG   +TT+ +    I   +A  VVQ++A   
Sbjct: 404 QACCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHY 463

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   +  SG+++  G N+    G   TN  +  P LV++L GVP   +  G N +  ++ 
Sbjct: 464 HCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSK 523

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G +   G NT GQLG  D   R  P  +  L  +G V  ++ G  + + +T  G V++ 
Sbjct: 524 SGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLG-VRYVSCGDDFSVFLTAGGGVFTC 582

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 353
           G+G+   LGHG  ++E+ PR +  F   G  + +++ G  H +A + S G +Y +G    
Sbjct: 583 GAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGV 640

Query: 354 GALGHG 359
           G LG G
Sbjct: 641 GQLGIG 646



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 6/193 (3%)

Query: 106 IVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           I   +A   +QI  G YH L ++NS  +++ GS+  G LG G    +  + T +   +  
Sbjct: 447 IRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGV 506

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            +  ++   NH+  V +SG +F  G N+    G  D N   F P  +  L+ +  + V+ 
Sbjct: 507 PIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQF-PTQLRTLRSLGVRYVSC 565

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYML 283
           G +F+ FLT  G V TCG+ T GQLGHG   +   P+ +   E +GS + QIA G  + L
Sbjct: 566 GDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMV--FELMGSKITQIACGRRHTL 623

Query: 284 A-VTGNGVVYSFG 295
           A V   G +Y FG
Sbjct: 624 AFVPSRGKIYGFG 636


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   +        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 20/312 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++  ENHAA V + G+VF+ G+ SS   GH+  N  +  P+LVEAL  V  K V  G
Sbjct: 264 VQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQ-INDSVSCPKLVEALASVHVKAVAFG 322

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 282
              T  +T+ G +       H  G L +    ++ +P K   P++ + SV +IA G  + 
Sbjct: 323 SKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSI-SVSKIACGEWHT 381

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             +T +G ++++G G+   LGHG++    +P+ +++   KG+ V  V+ G  H  A+   
Sbjct: 382 AIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESL--KGLRVKSVACGPWHTAAVVEV 439

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                    SG ++TWG    G LGH D+  K +P  +  L S+  +QV      T VL 
Sbjct: 440 TSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYDFLQVSCGAALTVVLT 499

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            TG V+  G    G LG P    +D      +  +L+   V +IS+G  H  V+T +G++
Sbjct: 500 STGVVFTIGSSKHGQLGNPH---ADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQV 556

Query: 453 FGFGDNERAQLG 464
           F +G     QLG
Sbjct: 557 FTWGKGADGQLG 568



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 122/271 (45%), Gaps = 17/271 (6%)

Query: 117 ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G  HT  ++ S     +S G+   G+L +  E  Q           +  V +++  E
Sbjct: 319 VAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGE 378

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 232
            H A +  SGQ+FT GD +    GH D  + I RP+ VE+LKG+  K V  G   T  + 
Sbjct: 379 WHTAIITSSGQLFTYGDGTFGVLGHGD-KQGIARPKEVESLKGLRVKSVACGPWHTAAVV 437

Query: 233 ---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
                       G + T G    G+LGH D   +  P  +  L      +Q++ G +  +
Sbjct: 438 EVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSY-DFLQVSCGAALTV 496

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +T  GVV++ GS  +  LG+     E       T + +   V  +S+G  HV  L   G
Sbjct: 497 VLTSTGVVFTIGSSKHGQLGNPHADGESICTVEGTLKNE--FVREISSGSSHVAVLTLKG 554

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            V+TWGKG  G LG GD  +++ P  + +L+
Sbjct: 555 QVFTWGKGADGQLGLGDYDNRSSPTLVEALQ 585



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 123/274 (44%), Gaps = 17/274 (6%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           P   PRLV +   +  + +  G N    +T  G V + G+ +   LGH        PK +
Sbjct: 249 PKALPRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLV 308

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRR 321
             L  V  V  +A G  +  AVT +G +  +  G++    L +  + ++  P  +     
Sbjct: 309 EALASV-HVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKL-FGPM 366

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
             I V +++ G+ H   + SSG ++T+G G  G LGHGD+     P+ + SLK      V
Sbjct: 367 DSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSV 426

Query: 382 CARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
                 T  +V+          +G ++ +G    G LG  D+ +    L P  +D L ++
Sbjct: 427 ACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIK---LVPTCVDLLTSY 483

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              Q+S G   TVV+T  G +F  G ++  QLG+
Sbjct: 484 DFLQVSCGAALTVVLTSTGVVFTIGSSKHGQLGN 517



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 114/242 (47%), Gaps = 19/242 (7%)

Query: 247 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           G +   + + +  P+ +A    +  V  IA G ++   VT  G V+S+G+ S+  LGH  
Sbjct: 240 GSMLDSEDIPKALPRLVASTTML-DVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQI 298

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDK 364
                 P+ ++      +HV  V+ G +H  A+  SG +  W +G    G L +  E ++
Sbjct: 299 NDSVSCPKLVEAL--ASVHVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQ 356

Query: 365 TLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
             P  L      ++V ++   +  T ++  +G ++ +G   FG LG  D+     + RP+
Sbjct: 357 WSPHKLFGPMDSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDK---QGIARPK 413

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLE 473
            ++SL+   V  ++ G +HT  V +           G+LF +GD +R +LGH   +  L 
Sbjct: 414 EVESLKGLRVKSVACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLV 473

Query: 474 PT 475
           PT
Sbjct: 474 PT 475



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 147/360 (40%), Gaps = 32/360 (8%)

Query: 106 IVETSAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSA 163
           +  T+  +   I  G  H  +++    VFS G+     LGH  +    VS  + +   ++
Sbjct: 256 VASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGH--QINDSVSCPKLVEALAS 313

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR------DTNRPIFRP-RLVEALKG 216
            HV  V+    H   V  SG++    + +     HR         R  + P +L   +  
Sbjct: 314 VHVKAVAFGSKHTCAVTVSGELLEWSEGA-----HRLGLLSNWYERNQWSPHKLFGPMDS 368

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
           +   ++  G   T  +T  G + T G  T G LGHGD      PK +  L+ +  V  +A
Sbjct: 369 ISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGL-RVKSVA 427

Query: 277 AGPSYMLAV----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
            GP +  AV            +G ++++G      LGH ++  +L P  +          
Sbjct: 428 CGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLL--TSYDF 485

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           ++VS G    V L S+G V+T G    G LG+     +++     +LK+    ++ +   
Sbjct: 486 LQVSCGAALTVVLTSTGVVFTIGSSKHGQLGNPHADGESICTVEGTLKNEFVREISSGSS 545

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              VL   G V+ +G    G LG  D    D    P ++++L+  HV  I+ G   +  V
Sbjct: 546 HVAVLTLKGQVFTWGKGADGQLGLGDY---DNRSSPTLVEALQGRHVQSIACGSNFSAAV 602



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 2/155 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  ++ G+ H   +   G V++WG      LGH      + P+ + +L S     V  
Sbjct: 262 LDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLVEALASVHVKAVAF 321

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 442
             + T  +  +G +  +   G   LG            P ++   + +  VS+I+ G +H
Sbjct: 322 GSKHTCAVTVSGELLEWS-EGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWH 380

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T ++T  G+LF +GD     LGH   +G   P E+
Sbjct: 381 TAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEV 415


>gi|229576496|gb|ACQ82638.1| At3g15430-like protein [Solanum hirtum]
          Length = 91

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 61/90 (67%), Positives = 72/90 (80%)

Query: 24  SGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELL 83
           SGRL+ +DL  LELTS+TF G+HGL+P+KF+SLVD AA QLC    IYA +  N Q ELL
Sbjct: 2   SGRLAGIDLISLELTSRTFRGTHGLFPKKFKSLVDYAAFQLCXXSPIYASLHCNAQEELL 61

Query: 84  NRCNGNWKRVLRFLQSVEHSSDIVETSAGN 113
            RCN NWKR+LRFLQ+VE SSD+VETSAGN
Sbjct: 62  KRCNXNWKRLLRFLQAVEQSSDMVETSAGN 91


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4074

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4190

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4191 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4248

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4308

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4309 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4344



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4009 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4066

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4067 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4125

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4126 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4183

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4184 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4243

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4244 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4300

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4301 GSNSEGQLGLGHTNHVREPTLVTV 4324



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    L++T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLSLTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3984 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4038

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4156

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4157 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4205



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3984 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4040

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4041 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4097

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4098 KLGHGNSDRQRRPRQIEALQGEE 4120



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           S   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 143/303 (47%), Gaps = 9/303 (2%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A V+ VS   +H+  +L  G V + G       GH   ++    P  + AL       V 
Sbjct: 10  ARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQ-CTSPTCIAALTDAGVDAVV 68

Query: 224 AGLNFT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G  +T    + RG +++ G    G+LGHG+  D   P+ IA       V ++A G ++ 
Sbjct: 69  CGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGR-PVARVACGDTHT 127

Query: 283 LAVT-GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           L VT G+G +Y+FG   N  LG G  +D L P+ +     +G  V  V+ G EH +A   
Sbjct: 128 LVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTAL--QGERVSSVACGSEHSLAATE 185

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +G V++WG G  G LG GD  D+  P  +  L       V    R + V+ D G V+ FG
Sbjct: 186 AGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFG 245

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
           W  +G LG  D    D   RP ++  L+   VS ++ G  HT+     G L+ +G N+  
Sbjct: 246 WSKYGQLGHGDH--VDHT-RPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFG 302

Query: 462 QLG 464
           QLG
Sbjct: 303 QLG 305



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 160/366 (43%), Gaps = 23/366 (6%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSAS 172
           + ++ G  H++ L+    V S G    G LGHG +  QC S T I   + A V   V  +
Sbjct: 13  LGVSCGSSHSIALLDCGVVASWGRGEDGQLGHG-QADQCTSPTCIAALTDAGVDAVVCGA 71

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           E   A     GQ+++ G       GH +    +F PR +    G P  +V  G   T  +
Sbjct: 72  EYTVAVASSRGQIYSWGWGDFGRLGHGECG-DVFVPRPIAFFSGRPVARVACGDTHTLVV 130

Query: 233 TI-RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           T   G ++T G N +GQLG G T D  +P+ +  L+    V  +A G  + LA T  G V
Sbjct: 131 TQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGE-RVSSVACGSEHSLAATEAGTV 189

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +S+G G    LG G+  D   P  +      G+ V  V  G  H   +   G V+T+G  
Sbjct: 190 FSWGWGRYGNLGDGDSQDRYTPTRVVGL--DGVTVTSVVCGWRHSAVVTDEGRVFTFGWS 247

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LGHGD +D T P  ++ L+      V    R T      G++Y +GW  FG LG  
Sbjct: 248 KYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLG 307

Query: 412 DRGVSDKVLRPRILDSLRA------------HHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           D   S+    P  +                   V+ ++ G  HTV VT+ G ++ +G   
Sbjct: 308 D---SEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGV 364

Query: 460 RAQLGH 465
             QLGH
Sbjct: 365 NGQLGH 370



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 118/260 (45%), Gaps = 15/260 (5%)

Query: 116 QITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           ++  G  HTL+++  + ++++ G +  G LG G  T  C+S   +       V  V+   
Sbjct: 119 RVACGDTHTLVVTQGDGALYTFGRNQNGQLGLG-HTNDCLSPQLVTALQGERVSSVACGS 177

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+    ++G VF+ G       G  D+ +  + P  V  L GV    V  G   +  +T
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDS-QDRYTPTRVVGLDGVTVTSVVCGWRHSAVVT 236

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V T G + +GQLGHGD +D   P  +A L+    V  +A G  + +A    G +Y+
Sbjct: 237 DEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHC-RVSTVAGGWRHTMAADSEGNLYA 295

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGI----------HVVRVSAGDEHVVALDSSG 343
           +G      LG G+  D   P  +  F   G            V  ++ G  H VA+  +G
Sbjct: 296 WGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAG 355

Query: 344 YVYTWGKGYCGALGHGDEID 363
            VY+WG+G  G LGHG E D
Sbjct: 356 EVYSWGRGVNGQLGHGAEQD 375



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 7/213 (3%)

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
           +E   V+ ++ G S+ +A+   GVV S+G G +  LGHG+      P  I      G+  
Sbjct: 7   QEEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDA 66

Query: 327 VRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V   A  E+ VA+ SS G +Y+WG G  G LGHG+  D  +P P++        +V    
Sbjct: 67  VVCGA--EYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGD 124

Query: 386 RKTFVLVD-TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             T V+    G++Y FG    G LG    G ++  L P+++ +L+   VS ++ G  H++
Sbjct: 125 THTLVVTQGDGALYTFGRNQNGQLGL---GHTNDCLSPQLVTALQGERVSSVACGSEHSL 181

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             T+ G +F +G      LG    +    PT +
Sbjct: 182 AATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRV 214



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 80/166 (48%), Gaps = 5/166 (3%)

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL-KSHLAVQVCAR 384
           V+ VS G  H +AL   G V +WG+G  G LGHG     T P  +++L  + +   VC  
Sbjct: 12  VLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGA 71

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
           +    V    G +Y +GW  FG LG  + G    V  PR +       V++++ G  HT+
Sbjct: 72  EYTVAVASSRGQIYSWGWGDFGRLGHGECG---DVFVPRPIAFFSGRPVARVACGDTHTL 128

Query: 445 VVTD-RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
           VVT   G L+ FG N+  QLG      CL P  +   + E  + +A
Sbjct: 129 VVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVA 174


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V +IA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 151/312 (48%), Gaps = 14/312 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            S    VQ+         V Q G++F CG+  N     G    N P  +PR + +L     
Sbjct: 2945 STLKCVQIVGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVP--QPRQLTSLSQYVI 3002

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L     V  IA 
Sbjct: 3003 KKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRS-KRVRDIAC 3061

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A+  NG +Y++G G    LGHG+   +L+P+ ++    +G  V++V+ G  D  
Sbjct: 3062 GGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKAL--EGQRVIQVALGSRDAQ 3119

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL  SG VY+WG G  G LG G     ++P P+  L      Q+    + +  L  +G
Sbjct: 3120 TLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSG 3179

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P+++++L+   V+ ++ G  H + V D G+++ +
Sbjct: 3180 QVWTWGKGDYFRLG---HGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAW 3236

Query: 456  GDNERAQLGHDT 467
            GDN+  Q G+ T
Sbjct: 3237 GDNDHGQQGNST 3248



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 147/288 (51%), Gaps = 10/288 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            QVF  G N     G    ++ I  P + E L  + C Q+  G      +T  G +  CG 
Sbjct: 2915 QVFVWGLNDKDQLGGPKGSK-IKTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGE 2973

Query: 244  NTHGQLGHGDTL-DRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G +  + P P+ +  L + V   V + +G  + +A+T +G V+S+G G +  
Sbjct: 2974 ATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3033

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  R K   V  ++ G  H  A+ S+G +YTWG G  G LGHGD 
Sbjct: 3034 LGHFSRMNCDKPRLIEALRSK--RVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDN 3091

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ + +L+    +QV   +R  +T  L D+G+VY +G   FG LG   RG S+  
Sbjct: 3092 TTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLG---RGGSEGC 3148

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
              P  ++ L    V QI  G   ++ +T  G+++ +G  +  +LGH T
Sbjct: 3149 SVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGT 3196



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  ++V   +G      L+  G V++ G    G+LGHG+      P++I  
Sbjct: 4012 PTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIES 4071

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L     VV IAAG ++   +T  G +YS+G G    LGHG+  D+ +P+ +   +   + 
Sbjct: 4072 LRG-KEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVT 4130

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + +     V++WG G  G LG G      +P  + +L+    ++V    
Sbjct: 4131 DVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGS 4190

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D + RPR   +L+   +  I+ G  H V 
Sbjct: 4191 QFSVALTKSGAVYTWGKGDYHRLG---HGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVA 4247

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             TD G ++ +GDN+  QLG  T      P
Sbjct: 4248 CTDAGEVYTWGDNDEGQLGDGTTNAIQRP 4276



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 150/314 (47%), Gaps = 20/314 (6%)

Query: 156 TRINFPSAAH-VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEA 213
           T I  P+    ++QV+ S N    +L++G+V+   +++     H   T   I   +L   
Sbjct: 425 TTIPLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEISTLADIEIIKLAAH 484

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
            +G  C  +T+           G V++ G+   G+LGHGDT+   +P  I  L    SVV
Sbjct: 485 SEGSHCLALTS----------EGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHG-KSVV 533

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--A 331
            +A G  +  A+T +G ++++G GS   LG G   D L P  +      G+ VV V+  +
Sbjct: 534 NVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLL--GVTVVDVACGS 591

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           GD   +AL  +G VY+WG G  G LG G       P+ +  L+     +V    + +  +
Sbjct: 592 GDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAV 651

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
              G+V+ +G      LG    G  + V  PR +++L   HV+ +S G +H +  T+ G 
Sbjct: 652 CKNGAVFTWGNGEGYKLG---HGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGE 708

Query: 452 LFGFGDNERAQLGH 465
           L  +G N++ QLG 
Sbjct: 709 LLSWGRNDKGQLGE 722



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 139/306 (45%), Gaps = 14/306 (4%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQI------TTGRYHTLLISNSSVFSCGSSLCGVLGH 145
           RV +   S E  S + E S    ++I      + G +   L S   V+S G+   G LGH
Sbjct: 454 RVYKMTNSAEPQS-MHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGH 512

Query: 146 GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 205
           G +T  C S   IN      VV V+   +H+A +  SG++FT G  S    G   T   I
Sbjct: 513 G-DTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTED-I 570

Query: 206 FRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
             P LV  L GV    V   +G   T  L   G V++ G   +G+LG G +     PK +
Sbjct: 571 LTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLV 630

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             L+ +  V ++  GP Y  AV  NG V+++G+G  + LGHG +     PR ++T    G
Sbjct: 631 DKLQGL-DVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETL--AG 687

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
            HV  +S G  H +A    G + +WG+   G LG G    K  P   +SL     + +  
Sbjct: 688 KHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITC 747

Query: 384 RKRKTF 389
              +TF
Sbjct: 748 SSAQTF 753



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 8/249 (3%)

Query: 114  QMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
            ++ I +G  H L +S    V+S G    G LGHG   + C     I       VV ++A 
Sbjct: 4025 KVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHG-NRSPCDRPRAIESLRGKEVVDIAAG 4083

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
              H+A +  +G++++ G       GH D+     +P+LV+ALKG     V  G      L
Sbjct: 4084 GAHSACITSTGELYSWGKGRYGRLGHGDSEDQT-KPKLVDALKGYRVTDVACGSGDAQTL 4142

Query: 233  TIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             I     V + G   +G+LG G +     P  I  L+ +G V+++  G  + +A+T +G 
Sbjct: 4143 CITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLG-VIKVECGSQFSVALTKSGA 4201

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            VY++G G    LGHG +    +PR   T   +G  +V ++ G  H VA   +G VYTWG 
Sbjct: 4202 VYTWGKGDYHRLGHGTEDHIRRPRRCTTL--QGKKIVSIACGSLHCVACTDAGEVYTWGD 4259

Query: 351  GYCGALGHG 359
               G LG G
Sbjct: 4260 NDEGQLGDG 4268



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 121/244 (49%), Gaps = 6/244 (2%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G +   G N  GQLG  +      P S   L  +  V Q+  G   + ++TG+G V + G
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPV-QLIGGEQTLFSITGDGKVCATG 3994

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+   LG G       P  I++ +   I  V +++G +H +AL + G VY+WG+G  G 
Sbjct: 3995 YGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGK 4054

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+      P  + SL+    V + A    +  +  TG +Y +G   +G LG  D   
Sbjct: 4055 LGHGNRSPCDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGD--- 4111

Query: 416  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            S+   +P+++D+L+ + V+ ++  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4112 SEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKV 4171

Query: 474  PTEI 477
            P +I
Sbjct: 4172 PMKI 4175



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 114/241 (47%), Gaps = 7/241 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  VFS G    G LGH      C     I    +  V  ++   +H+A +
Sbjct: 3011 GRHAMALTVDGKVFSWGEGDDGKLGHFSRMN-CDKPRLIEALRSKRVRDIACGGSHSAAI 3069

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
            + +G ++T G       GH D N    RP+LV+AL+G    QV  G     T  LT  G 
Sbjct: 3070 ISNGDLYTWGLGEYGRLGHGD-NTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGT 3128

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V++ G    G+LG G +     P  I  L  VG V QI  G  + LA+T +G V+++G G
Sbjct: 3129 VYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVG-VCQIECGAQFSLALTKSGQVWTWGKG 3187

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++T   KG  V  V+ G  H +++  +G VY WG    G  G
Sbjct: 3188 DYFRLGHGTDAHVRKPQLVETL--KGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQG 3245

Query: 358  H 358
            +
Sbjct: 3246 N 3246



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 104/200 (52%), Gaps = 9/200 (4%)

Query: 272 VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
           ++++AA    S+ LA+T  G VYS+G+G    LGHG+      P  I      G  VV V
Sbjct: 478 IIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELH--GKSVVNV 535

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRK 387
           + G  H  A+ +SG ++TWG+G  G LG G   D   P  +S L     V V   +   +
Sbjct: 536 ACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQ 595

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T  L DTGSVY +G   +G LG   RG S+    P+++D L+   V+++  G  ++  V 
Sbjct: 596 TIALADTGSVYSWGDGEYGKLG---RGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVC 652

Query: 448 DRGRLFGFGDNERAQLGHDT 467
             G +F +G+ E  +LGH T
Sbjct: 653 KNGAVFTWGNGEGYKLGHGT 672



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 217  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
            V  K+V  G   +G   I+  V   G N   QLG        TP     L  +   VQI 
Sbjct: 2898 VMAKKVKCG---SGVKDIQTQVFVWGLNDKDQLGGPKGSKIKTPGINETLSTL-KCVQIV 2953

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEH 335
             G   +  VT +G +++ G  +N  LG G     + QPR + +  +  I  V V +G  H
Sbjct: 2954 GGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRH 3013

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG+G  G LGH   ++   P  + +L+S     +      +  ++  G
Sbjct: 3014 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNG 3073

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 453
             +Y +G   +G LG  D       LRP+++ +L    V Q++ G     T+ +TD G ++
Sbjct: 3074 DLYTWGLGEYGRLGHGDNTTQ---LRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVY 3130

Query: 454  GFGDNERAQLGHDTLRGCLEPTEI 477
             +GD +  +LG     GC  P  I
Sbjct: 3131 SWGDGDFGKLGRGGSEGCSVPHPI 3154



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 24/242 (9%)

Query: 241 CGSN---THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           CG+      G L   D     TP +I    ++  ++Q+A   + +L +   G VY   + 
Sbjct: 402 CGAQELFAWGWLSTSDATCHNTPTTIPLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNS 461

Query: 298 SNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDE--HVVALDSSGYVYTWGKGYCG 354
           +             +P+++        I +++++A  E  H +AL S G VY+WG G  G
Sbjct: 462 A-------------EPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFG 508

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD +    P  ++ L     V V      +  +  +G ++ +G   FG LG    G
Sbjct: 509 KLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGL---G 565

Query: 415 VSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            ++ +L P ++  L    V  ++  +G   T+ + D G ++ +GD E  +LG     GC 
Sbjct: 566 STEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCK 625

Query: 473 EP 474
            P
Sbjct: 626 AP 627



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 10/228 (4%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--ASENHAA 177
            G +   +ISN  +++ G    G LGHG  TTQ +    +       V+QV+  + +    
Sbjct: 3063 GSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQ-LRPKLVKALEGQRVIQVALGSRDAQTL 3121

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             +  SG V++ GD      G R  +     P  +E L GV   Q+  G  F+  LT  G 
Sbjct: 3122 ALTDSGTVYSWGDGDFGKLG-RGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQ 3180

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V T G   + +LGHG       P+ +  L+    V  +A G  + L+V  NG VY++G  
Sbjct: 3181 VWTWGKGDYFRLGHGTDAHVRKPQLVETLKG-KKVTHVAVGALHCLSVLDNGQVYAWGDN 3239

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA---LDSS 342
             +   G+       +P  +Q    +G  + RV+ G  H +A   LDSS
Sbjct: 3240 DHGQQGNSTTTVNRKPALVQGL--EGCKISRVACGSSHSIAWCTLDSS 3285



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 8/205 (3%)

Query: 119  TGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL I++  SV+S G    G LG G  +  C    +I+      V++V      + 
Sbjct: 4136 SGDAQTLCITDDDSVWSWGDGDYGKLGRG-GSDGCKVPMKIDALQGLGVIKVECGSQFSV 4194

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH  T   I RPR    L+G     +  G       T  G 
Sbjct: 4195 ALTKSGAVYTWGKGDYHRLGH-GTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGE 4253

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA + N  V +    
Sbjct: 4254 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHSLAWSTNKPVNAGKLP 4312

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRK 322
            +   +    +++ LQ   I   R +
Sbjct: 4313 AQIPM----EYNSLQSLPINVLRNR 4333


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4081

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4197

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4198 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4255

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4315

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4316 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4351



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4016 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4073

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4074 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4132

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4133 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4190

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4191 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4250

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4251 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4307

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4308 GSNSEGQLGLGHTNHVREPTLVTV 4331



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    L++T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLSLTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3991 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4045

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4046 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4105

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4106 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4163

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4164 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4212



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3991 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4047

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4048 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4104

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4105 KLGHGNSDRQRRPRQIEALQGEE 4127



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           S   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4082

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4198

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4256

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4317 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4017 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4074

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4075 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4133

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4134 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4191

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4192 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4251

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4252 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4308

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4309 GSNSEGQLGLGHTNHVREPT 4328



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3992 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4046

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4047 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4106

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4107 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4164

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4165 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4213



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3992 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4048

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4049 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4105

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4106 KLGHGNSDRQRRPRQIEALQGEE 4128


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 156 VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 214

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 215 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 274

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 340
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 275 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 332

Query: 341 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 333 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 392

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 393 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 449

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEI 477
           F +G     +LGH  +     PT++
Sbjct: 450 FTWGKGANGRLGHGDIEDRKVPTQV 474



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 127/284 (44%), Gaps = 19/284 (6%)

Query: 106 IVET-SAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ +A N   +  G +HT  ++ +     +  G+   G+LGHG +    +        
Sbjct: 199 LVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGAL 258

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               V  VS    H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    
Sbjct: 259 DGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIA 317

Query: 222 VTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           V  G+  T  +              G + T G     +LGHGD   R  P  +A L +  
Sbjct: 318 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY- 376

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
              ++A G S  + +T +G V S G+     LG+      L P  ++  R  G HV++V+
Sbjct: 377 DFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVA 434

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            G  HV  L     V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 435 CGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 478



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 131 DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 190

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 191 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 248

Query: 365 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 249 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLG---HGNLTSISCPK 305

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 306 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 365

Query: 473 EPT 475
           +PT
Sbjct: 366 KPT 368



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 19/288 (6%)

Query: 199 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 257
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 135 RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 194

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 315
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 195 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 253

Query: 316 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 254 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 312

Query: 376 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 313 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 369

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           + SL  +   +++ G   TV +T  G++   G++   QLG+    G L
Sbjct: 370 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL 417



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 17/221 (7%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 163
           ++ G +HT LI S   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 266 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 325

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 326 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 382

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 383 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 441

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 442 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 482



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 340 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 109 DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 168

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 169 VTRNGDVFTWGEDSGGRLG---HGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 225

Query: 451 RLFGFGD--NERAQLGHDTLRGCLEPTEI 477
            L+ +GD  +    LGH T  G   P  I
Sbjct: 226 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 254


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 235 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 294 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V +IA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4023 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4081

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4082 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4140

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4141 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4197

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4198 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4255

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4256 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4315

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4316 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4351



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4016 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4073

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4074 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4132

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4133 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4190

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4191 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4250

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4251 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4307

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4308 GSNSEGQLGLGHTNHVREPT 4327



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3991 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4045

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4046 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4105

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4106 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4163

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4164 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4212



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3991 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4047

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4048 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4104

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4105 KLGHGNSDRQRRPRQIEALQGEE 4127


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V +IA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 171/349 (48%), Gaps = 29/349 (8%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           VF+CG +  G LGH     Q V  + +       +V+V+A    + F+ + G+V+ CG N
Sbjct: 42  VFACGQNRKGELGHSTFREQ-VEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLN 100

Query: 192 SSFCCGH--RDT-----NRPIFRPRLVEALKGVP--CKQVTA----GLNFTGFLTIRGHV 238
           S+   G   R+T     NR       +E ++G+P  CK V      G      +T  G V
Sbjct: 101 ST---GQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQV 157

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVVYSFGS 296
           ++CG N HGQLG G T   P   S+  +E +  V  ++A  SY   + V+ +G  +SFG 
Sbjct: 158 YSCGCNNHGQLGLGSTKMSP---SLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGL 214

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVALDSSGYVYTWGKGYCGA 355
                LG G + ++L P  ++       H+VR++A G  H + L   G V++ GK   G 
Sbjct: 215 NDCGQLGIGTRPNQLLPHRVEL---PSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQ 271

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G      +P  +++L+   A  +      T V+++ G ++ FG+   G LG    G 
Sbjct: 272 LGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGL---GH 328

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +D V  P  +++LR   V +IS G + T V+++ G L+ FG N   QLG
Sbjct: 329 TDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLG 377



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 20/177 (11%)

Query: 120 GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ------VSAS 172
           G+YHT+ ++    VFSCG +L G LG G       S +  N P+    +Q      ++  
Sbjct: 248 GQYHTIFLTEEGMVFSCGKNLNGQLGLG-------SRSSTNVPTLIAALQERPASMIACG 300

Query: 173 ENHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            +H   VL+ G++FT G N       GH D+   +  P  VE L+ V   +++ G +FT 
Sbjct: 301 YSHTCVVLEDGKLFTFGYNHQGQLGLGHTDS---VSSPMQVETLRNVKVVKISCGTHFTC 357

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            L+  G + + G N HGQLG GD+ DR  P  + P     ++ +IA G  +++A++G
Sbjct: 358 VLSESGELWSFGCNCHGQLGLGDSTDRLVP-VLVPSMTKKNLSEIACGFHHLVAISG 413



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 81/202 (40%), Gaps = 16/202 (7%)

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
           G+  V++ G      LGH    ++++   +Q+ RRK   +V+V+AG E    L   G VY
Sbjct: 38  GDCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRK--RIVKVAAGSETSYFLTEEGKVY 95

Query: 347 TWGKGYCGALGHGD-----------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             G    G L                 D  L E L      + V          V+   G
Sbjct: 96  CCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAG 155

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            VY  G    G LG     +S  +L   +++SL+   V   S   +H+VVV+  G  F F
Sbjct: 156 QVYSCGCNNHGQLGLGSTKMSPSLL---LVESLKHVRVLSASCSYHHSVVVSSDGSAFSF 212

Query: 456 GDNERAQLGHDTLRGCLEPTEI 477
           G N+  QLG  T    L P  +
Sbjct: 213 GLNDCGQLGIGTRPNQLLPHRV 234


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4074

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4190

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4191 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4248

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4308

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4309 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4344



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4009 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4066

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4067 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4125

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4126 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4183

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4184 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4243

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4244 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4300

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4301 GSNSEGQLGLGHTNHVREPT 4320



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3984 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4038

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4156

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4157 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4205



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3984 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4040

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4041 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4097

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4098 KLGHGNSDRQRRPRQIEALQGEE 4120


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V +IA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 235 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 294 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V +IA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G  H+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLG 328



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 335 HV-VALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H    + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V +IA G  +    V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALND 101

Query: 235 RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA++    V+ 
Sbjct: 102 KGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFC 160

Query: 294 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +G      LG G     +  P+ +++    GI  ++V+AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
              +   + PR +  L    V++I+ G  HT   V   GR++ FG     QLG
Sbjct: 276 HNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  ++ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V  ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G YH+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V +IA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 153/330 (46%), Gaps = 22/330 (6%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           +++    H A V + G+VFT G+ S    GH   N    RP LVE L       V  G  
Sbjct: 268 EIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDND-FSRPHLVEFLAVNNVDFVACGEY 326

Query: 228 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 284
            T  ++  G + T G  TH  G LGHG  +    PK ++ PLE +  V+ +A G  +   
Sbjct: 327 HTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGL-QVLSVACGTWHSAL 385

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 339
            T NG +++FG G+   LGHG++     PR +Q     G+  ++V+ G  H  A+     
Sbjct: 386 ATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQIL--SGLKTIKVACGVWHTAAIIEVMS 443

Query: 340 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
                 SS  ++TWG G    LGHG +    LP  +S+L  +   Q+      T  L  +
Sbjct: 444 QSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTS 503

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G V+  G   +G LG P   +SD  L   + D L    V +IS G YH  V+T R  +F 
Sbjct: 504 GHVFTMGGTAYGQLGNP---LSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFT 560

Query: 455 FGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           +G     +LGH        PT  F++ +++
Sbjct: 561 WGRGANGRLGHGDTEDRRSPT--FVEALKD 588



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 18/226 (7%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G +H+ L  SN  +F+ G    GVLGHG    + V + R +   S    ++V+  
Sbjct: 374 LSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDR--ESVPYPREVQILSGLKTIKVACG 431

Query: 173 ENHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             H A ++    QSG      ++FT GD      GH  +      P  V AL      Q+
Sbjct: 432 VWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGH-GSKETYLLPTCVSALIDYNFHQL 490

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 281
             G   T  LT  GHV T G   +GQLG  + L       +   + VG  V+ I+ G  +
Sbjct: 491 ACGHTMTVALTTSGHVFTMGGTAYGQLG--NPLSDGRLPCLVQDKLVGEFVEEISCGAYH 548

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           +  +T    V+++G G+N  LGHG+  D   P  ++  + + +  +
Sbjct: 549 VAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSI 594


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 154/336 (45%), Gaps = 13/336 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
             GH    +   RP  V AL       V+ G   T  L  +G V+  G  T GQLG   T
Sbjct: 65  QLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGT 121

Query: 255 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
            +    P++I  L E+  +VQ+A G  + LA++    V+S+G      LG G E   +  
Sbjct: 122 EECVRVPRNIRSLSEI-QIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI   +++AG  H   L  SG ++ WG+   G LG  D+ D+ +P  L S
Sbjct: 181 PQMIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSV 295

Query: 433 VSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 467
           V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 296 VTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSE-- 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL     V++WG+   G LG G E  K T P+ + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRSQKVVHICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 7/261 (2%)

Query: 110 SAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVV 167
            A N + ++ G  HTL +++   V++ G +  G LG  P T +CV   R I   S   +V
Sbjct: 82  DAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECVRVPRNIRSLSEIQIV 140

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           QV+    H+  + +  +VF+ G N     G     +    P+++++L G+P  Q+ AG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGA 200

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  LT+ G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T 
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRS-QKVVHICCGEDHTAALTK 259

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVY 346
            G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRIY 317

Query: 347 TWGKGYCGALGHGDEIDKTLP 367
           ++G G  G LG G   ++  P
Sbjct: 318 SFGLGGNGQLGTGTTSNRKSP 338



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G  +    G   T   +  PR + +L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G    + T P+ I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQTSPQMIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRSQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRSQKVVHICCGEDHTAALT 258

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 291
             G V T G+  +GQLGH  T     P+ +   E +GSVV QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSVVTQITCGRQHTTAFVPSSGRI 316

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ 317
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALK-TKRIRDIAY 3107

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+   +T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3108 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR IQ  + K I    ++ G  H   L SSG +YTWG G  G LGHGD 
Sbjct: 3080 LGHFSRMNCDKPRLIQALKTKRIR--DIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDN 3137

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 148/304 (48%), Gaps = 23/304 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H +V+T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 737

Query: 459 ERAQ 462
           ++ Q
Sbjct: 738 DQCQ 741



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 9/203 (4%)

Query: 271 SVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHV 326
           ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  ++ G HV
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 554

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 384
           V ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + V   + 
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             +T  + + G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   ++
Sbjct: 615 DAQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 445 VVTDRGRLFGFGDNERAQLGHDT 467
            +T  G+++ +G  +  +LGH T
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT 694



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4100

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4101 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 4159

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4218

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4219 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4276

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4277 DNDEGQLGDG 4286



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4187 CKVPMKI 4193



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 116/249 (46%), Gaps = 21/249 (8%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQVSAS 172
            GR+ T L  +  VFS G    G LGH        P   Q +   RI          ++  
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIR--------DIAYG 3108

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 230
             +H+A +  SG+++T G       GH D N    +P++V+ L G    QV  G     T 
Sbjct: 3109 SSHSAPLTSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             LT  G V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GV
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGV 3226

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            V+++G G  F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG 
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGD 3284

Query: 351  GYCGALGHG 359
               G  G+G
Sbjct: 3285 NDHGQQGNG 3293



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H + L     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLVLTEDSEVHSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLGVTKPEP 753



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 503

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 504 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 564 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 657



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3105 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 6/168 (3%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 671

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 730

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL    P+  A P  +   +V IA GP+   A
Sbjct: 731 VHSWGSNDQCQ--HFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 776



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G  H+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 16/328 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA +VVQV+        V   G+V++CG+  N     G      PI  PR + AL     
Sbjct: 2901 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 2958

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 2959 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALK-TKRIRDIAY 3017

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+   +T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 3018 GSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3075

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 3076 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3135

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +
Sbjct: 3136 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3192

Query: 456  GDNERAQLGHDTLRGCLEPTEIFIQEME 483
            GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3193 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3218



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V++CG 
Sbjct: 2871 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 2929

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 2930 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 2989

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR IQ  + K I    ++ G  H   L SSG +YTWG G  G LGHGD 
Sbjct: 2990 LGHFSRMNCDKPRLIQALKTKRIR--DIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDN 3047

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3048 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3104

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 3105 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3150



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3954 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4012

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4013 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4071

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4072 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4129

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4130 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4189

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4190 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4226



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3940 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3999

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 4000 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4058

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4059 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4118

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4119 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4175

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4176 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4204



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 148/304 (48%), Gaps = 23/304 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+QV+ +E     + ++G+V+T   NS            +  P+LV+ L      ++ A 
Sbjct: 364 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 412

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 413 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 472

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 473 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 530

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 531 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 590

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H +V+T+   +  +G N
Sbjct: 591 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 647

Query: 459 ERAQ 462
           ++ Q
Sbjct: 648 DQCQ 651



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 9/203 (4%)

Query: 271 SVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHV 326
           ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  ++ G HV
Sbjct: 405 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 464

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 384
           V ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + V   + 
Sbjct: 465 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 524

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             +T  + + G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   ++
Sbjct: 525 DAQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 581

Query: 445 VVTDRGRLFGFGDNERAQLGHDT 467
            +T  G+++ +G  +  +LGH T
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGHGT 604



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 3952 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4010

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4011 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 4069

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4070 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4128

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4129 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4186

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4187 DNDEGQLGDG 4196



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3919

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3920 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3979

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3980 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4039

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4040 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4096

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4097 CKVPMKI 4103



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 116/249 (46%), Gaps = 21/249 (8%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQVSAS 172
            GR+ T L  +  VFS G    G LGH        P   Q +   RI          ++  
Sbjct: 2967 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIR--------DIAYG 3018

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTG 230
             +H+A +  SG+++T G       GH D N    +P++V+ L G    QV  G     T 
Sbjct: 3019 SSHSAPLTSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3077

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             LT  G V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GV
Sbjct: 3078 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGV 3136

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            V+++G G  F LGHG      +P+ ++  R  G  +V V+ G  H +A+  SG VY WG 
Sbjct: 3137 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGD 3194

Query: 351  GYCGALGHG 359
               G  G+G
Sbjct: 3195 NDHGQQGNG 3203



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 120/261 (45%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 413 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 468

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 469 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 527

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  + +A+T +
Sbjct: 528 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 586

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H + L     V++W
Sbjct: 587 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLVLTEDSEVHSW 644

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 645 GSN--DQCQHFDTLGVTKPEP 663



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V+Q+A      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 364 VMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLASRNIVKIAAHS 413

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 414 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 473

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 474 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 530

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 531 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 567



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 3015 IAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3073

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 3074 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3132

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 3133 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3191

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3192 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3234



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4064 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4122

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4123 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4181

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4182 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4227



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 6/168 (3%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       V++V      + 
Sbjct: 523 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVIKVRCGSQFSI 581

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 582 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSE 640

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL    P+  A P  +   +V IA GP+   A
Sbjct: 641 VHSWGSNDQCQ--HFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 686



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3854 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3913

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3914 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3970

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3997



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L     VQV    +  F +   G VY  G
Sbjct: 2872 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 2928

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    G+S   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 2929 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2985

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 2986 DDGKLGHFSRMNCDKPRLI 3004


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 2484 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2542

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2543 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2601

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 2602 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 2658

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 2659 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 2716

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 2717 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 2776

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 2777 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 2812



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 2477 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 2534

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 2535 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 2593

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 2594 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 2651

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 2652 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 2711

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 2712 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 2768

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 2769 GSNSEGQLGLGHTNHVREPT 2788



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 2452 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 2506

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 2507 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 2566

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 2567 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 2624

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 2625 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 2673



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 2452 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 2508

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 2509 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 2565

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 2566 KLGHGNSDRQRRPRQIEALQGEE 2588


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 136/277 (49%), Gaps = 10/277 (3%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           P+F PR+     G   K+V  G   T FL   G V+TCGSN+ GQLGH    +  +P+ +
Sbjct: 20  PVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGN--SPELV 77

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRK 322
             L+    +  ++ G ++ +AV   G V+ +G+G    LG       ++ PR ++     
Sbjct: 78  GALD-TQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDH 136

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQV 381
            I   +V  G++H +AL   G ++TWG+   G LG G  E  K  P P+ SL      Q+
Sbjct: 137 SIS--QVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQI 194

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
            A     F L  +G+V+G+G    G LG  D+   D+ + P  +  LR+  V  IS G  
Sbjct: 195 TAGGDHCFALSLSGAVFGWGKNKAGQLGLNDK--QDRAV-PCHIKFLRSQRVVYISCGDE 251

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           HT  +T  G LF FGD  R QLGH +    L P  + 
Sbjct: 252 HTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVM 288



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 14/311 (4%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           +V+    H  F+LQ G V+TCG NS   CG    ++    P LV AL       V+ G  
Sbjct: 37  EVACGGQHTLFLLQDGSVYTCGSNS---CGQLGHDKAGNSPELVGALDTQKITMVSCGRA 93

Query: 228 FTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            +  +  +G V   G+   GQLG    +T  R  P+ +  L +  S+ Q+  G  + +A+
Sbjct: 94  HSVAVNEQGQVFVWGAGDGGQLGLETAETAVR-IPRLLKKLCD-HSISQVVCGNQHCIAL 151

Query: 286 TGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           + +G ++++G  S+  LG G+ +  +L P  +++    GI + +++AG +H  AL  SG 
Sbjct: 152 SRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSL--AGIPLAQITAGGDHCFALSLSGA 209

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           V+ WGK   G LG  D+ D+ +P  +  L+S   V +      T  L  +G ++ FG   
Sbjct: 210 VFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGS 269

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQL 463
            G LG    G S+  L PR +  L    VSQI+ G +HT+  V   G ++ FG N   QL
Sbjct: 270 RGQLG---HGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQL 326

Query: 464 GHDTLRGCLEP 474
           G   L     P
Sbjct: 327 GTGILADLRSP 337



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 137/302 (45%), Gaps = 19/302 (6%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQV 169
           ++  G  HTL L+ + SV++CGS+ CG LGH      PE    +   +I          V
Sbjct: 37  EVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNSPELVGALDTQKITM--------V 88

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           S    H+  V + GQVF  G       G       +  PRL++ L      QV  G    
Sbjct: 89  SCGRAHSVAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHC 148

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
             L+  G + T G N+ GQLG G     + +P  +  L  +  + QI AG  +  A++ +
Sbjct: 149 IALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGI-PLAQITAGGDHCFALSLS 207

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V+ +G      LG  ++ D   P  I+  R +   VV +S GDEH  AL  SG ++T+
Sbjct: 208 GAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQ--RVVYISCGDEHTAALTKSGGLFTF 265

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGS 407
           G G  G LGHG   ++ LP  +  L      Q+ C R      +  +G+VY FG    G 
Sbjct: 266 GDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQ 325

Query: 408 LG 409
           LG
Sbjct: 326 LG 327



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 113/241 (46%), Gaps = 9/241 (3%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P+  + L D + SQ+   +     +SR+ Q+    + N + +  L   ++ + S   V++
Sbjct: 127 PRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQ-NSSGQLGLGKGETSKLSPSPVKS 185

Query: 110 SAGNQM-QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 167
            AG  + QIT G  H   +S S +VF  G +  G LG   +  + V    I F  +  VV
Sbjct: 186 LAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVP-CHIKFLRSQRVV 244

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            +S  + H A + +SG +FT GD S    GH  +N  +  PR V  L G    Q+T G +
Sbjct: 245 YISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELL-PRRVMELMGTEVSQITCGRH 303

Query: 228 FT-GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
            T  F+   G V+  G N+HGQLG G   D  +P    P++     + +  G  Y+   T
Sbjct: 304 HTLAFVPSSGTVYAFGCNSHGQLGTGILADLRSPH---PVKNDFLTLNLRKGKVYLRIDT 360

Query: 287 G 287
           G
Sbjct: 361 G 361


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 12/230 (5%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
           +  +R  ++++  SDI        +Q+  G  H+L +S +S VF  G +  G LG G + 
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDC 175

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            +  S   +        +QV+A   H+  +  SG +F  G N     G  D N   + P 
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           L+++L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292

Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           GS+V QIA G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 340
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 341 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 315

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 316 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEI 477
           F +G     +LGH  +     PT++
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV 397



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 127/284 (44%), Gaps = 19/284 (6%)

Query: 106 IVET-SAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ +A N   +  G +HT  ++ +     +  G+   G+LGHG +    +        
Sbjct: 122 LVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGAL 181

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               V  VS    H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    
Sbjct: 182 DGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIA 240

Query: 222 VTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           V  G+  T  +              G + T G     +LGHGD   R  P  +A L +  
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY- 299

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
              ++A G S  + +T +G V S G+     LG+      L P  ++  R  G HV++V+
Sbjct: 300 DFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVA 357

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            G  HV  L     V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 358 CGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 401



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 365 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 172 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGH---GNLTSISCPK 228

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 288

Query: 473 EPT 475
           +PT
Sbjct: 289 KPT 291



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 19/288 (6%)

Query: 199 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 257
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 315
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 316 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 376 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 292

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           + SL  +   +++ G   TV +T  G++   G++   QLG+    G L
Sbjct: 293 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL 340



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 17/221 (7%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 163
           ++ G +HT LI++   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 249 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 306 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 364

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 365 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 405



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 340 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 92  VTRNGDVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 148

Query: 451 RLFGFGD--NERAQLGHDTLRGCLEPTEI 477
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 170/364 (46%), Gaps = 19/364 (5%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L + ++ +V++ G +  G LG G   T      ++   S   VV  SA  
Sbjct: 150 VAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLSG--VVAASAGW 207

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+   L  G V+  G+N+S   G+  +      P  V+ L+GV    V AG  ++  L 
Sbjct: 208 AHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMA--VAAGGLYSLALR 265

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G +   GSN HGQ G G T+   +   +  L     VV +AAG ++ LAV  +G +++
Sbjct: 266 SDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWLS---GVVAMAAGSAHSLAVRSDGTLWA 322

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+     LG G + D   P+ +Q   R    VV V+AGD H +AL + G V+TWG  + 
Sbjct: 323 WGANYYGQLGDGTRKDHDTPKRVQGLSR----VVAVAAGDGHSIALCADGTVWTWGYNHD 378

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G L HG   D   P PL   +    V V A    +  ++  GSV+ +G+   G LG    
Sbjct: 379 GQLAHGSTNDS--PVPLHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSL 436

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
             S + +R + L       V+ +S GL H++     G ++ +G N   QLG  T    L 
Sbjct: 437 SSSAEPVRVQGLSG-----VAAVSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNALV 491

Query: 474 PTEI 477
           P  +
Sbjct: 492 PVRV 495



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 169/412 (41%), Gaps = 64/412 (15%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + ++ G  H+L +  + +V++ G +  G LG G   +       +  P  + VV VSA +
Sbjct: 49  VAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHS---EPVRVPGLSGVVAVSAGD 105

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           NH+  +   G V+  GDN+S   G     +    P  +E L  V    V AG N +  + 
Sbjct: 106 NHSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLSEVVA--VAAGGNHSLAVR 163

Query: 234 IRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
             G V   G N  GQLG G+ L  R  PK +  L     VV  +AG ++ +    +G V+
Sbjct: 164 ADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQGLS---GVVAASAGWAHSMVALSDGSVW 220

Query: 293 SFGS------GSNFCLGHGEQHDELQP-RAIQTFRRKGIH-------------------- 325
           ++G+      G+   +G+G   +++Q  R +      G++                    
Sbjct: 221 AWGNNTSGQLGNGISVGYGALPEQVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSNDHGQ 280

Query: 326 --------------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
                               VV ++AG  H +A+ S G ++ WG  Y G LG G   D  
Sbjct: 281 RGDGSTVYLSSSVRVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHD 340

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            P+ +  L     V V A    +  L   G+V+ +G+   G L       S   L  R L
Sbjct: 341 TPKRVQGLSR--VVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVPLHVREL 398

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             + A     ++ G  H++ V   G ++ +G N + QLG  +L    EP  +
Sbjct: 399 SGVVA-----VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRV 445



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 159/361 (44%), Gaps = 39/361 (10%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           + +  G  H+L + S+ ++++ G++  G LG G       P+  Q +S           V
Sbjct: 302 VAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQGLS----------RV 351

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAG 225
           V V+A + H+  +   G V+T G N      H  TN  P+  P  V  L GV    V AG
Sbjct: 352 VAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPV--PLHVRELSGVVA--VAAG 407

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              +  +   G V   G N  GQLG G       P  +  L     V  ++AG ++ LA 
Sbjct: 408 ALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGLS---GVAAVSAGLNHSLAR 464

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGY 344
             +G V+++G  S   LG G   + L P      R +G+  V  +SAG  H +A  S G 
Sbjct: 465 GTDGGVWAWGGNSFGQLGEGTTSNALVP-----VRVRGLSGVETISAGFNHSLARASDGG 519

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           ++ WG  Y G LG G   + ++P  +  L    A  V A    +  +   GSV+ +G   
Sbjct: 520 LWAWGGNYTGQLGDGTTSNSSVPVRVQGLSGVAA--VFAGLNHSLAVRTDGSVWAWGINS 577

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           FG LG    G ++    P  +  L    +  ++ G  H++ V   G ++ +G+N   QLG
Sbjct: 578 FGQLG---EGTTNTSFAPVRVQGLSG--METVAAGSLHSLSVGSDGSMWSWGNNHHGQLG 632

Query: 465 H 465
           H
Sbjct: 633 H 633



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 16/260 (6%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L ++S+ SV++ G +  G LG G  ++   S   +     + V  VSA  
Sbjct: 402 VAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSS---SAEPVRVQGLSGVAAVSAGL 458

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           NH+      G V+  G NS    G   T+  +  P  V  L GV  + ++AG N +    
Sbjct: 459 NHSLARGTDGGVWAWGGNSFGQLGEGTTSNALV-PVRVRGLSGV--ETISAGFNHSLARA 515

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G +   G N  GQLG G T +   P  +  L  V +V    AG ++ LAV  +G V++
Sbjct: 516 SDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQGLSGVAAVF---AGLNHSLAVRTDGSVWA 572

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G  S   LG G  +    P  +Q     G+  V  +AG  H +++ S G +++WG  + 
Sbjct: 573 WGINSFGQLGEGTTNTSFAPVRVQGL--SGMETV--AAGSLHSLSVGSDGSMWSWGNNHH 628

Query: 354 GALGHGDEIDKTLPEPLSSL 373
           G LGHG  +    P P+ SL
Sbjct: 629 GQLGHG--LPGRSPTPVRSL 646



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 107/246 (43%), Gaps = 16/246 (6%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           + AG + +  L   G V   G N  GQLG G +     P  +  L     VV ++AG  +
Sbjct: 1   MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLS---GVVAVSAGEGH 57

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALD 340
            LA+  +G V+++G  +   LG G      +P      R  G+  VV VSAGD H +AL 
Sbjct: 58  SLALHRDGTVWAWGDNALGQLGDGTSDSHSEP-----VRVPGLSGVVAVSAGDNHSLALR 112

Query: 341 SSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
           S G V+ WG      LG        ++P  L  L     V V A    +  +   G+V+ 
Sbjct: 113 SDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLSE--VVAVAAGGNHSLAVRADGTVWA 170

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +G    G LG  D  +      P+ +  L    V   S G  H++V    G ++ +G+N 
Sbjct: 171 WGDNFAGQLG--DGNILTTRWLPKQVQGLSG--VVAASAGWAHSMVALSDGSVWAWGNNT 226

Query: 460 RAQLGH 465
             QLG+
Sbjct: 227 SGQLGN 232


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 209/474 (44%), Gaps = 44/474 (9%)

Query: 12  ELPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKF-RSLVDLAASQLCALHSI 70
           E  SH +  I  +G  S++DL H      +  GS  L   K+  S +D +          
Sbjct: 88  EKESHSLSVIYKNGE-SSLDLVH------SLYGSPRLIQNKYLHSNLDCSEPFFSPRQKA 140

Query: 71  YAGMS---RNVQIELLNRCNGNWKRVLRFLQSVEHSSD--IVETSAGNQMQITTGRYHTL 125
           ++ +      +  EL+NR   N    LR ++S E   D  I++     Q + +     +L
Sbjct: 141 WSELDSYLEKISPELVNRVKNN----LRDIRSAETIKDQRIIQMPKLKQSEGSNAATDSL 196

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQ 184
                 +F  G  L  +  HG      +S  R+   S    VQ ++  E HAA V + GQ
Sbjct: 197 ----KDIFVWGDVLGRMSDHGHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQ 252

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           VF+ G+ +    GH+ T+  +  P+++++L   P K +  G  +T  +++ G ++  G  
Sbjct: 253 VFSWGEENGGRLGHK-TSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGEG 311

Query: 245 THGQLGHGDTLDRPTP----KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
            H  LG G    + +P    K I+  + + SV++IA G  +   ++  G +Y++G G+  
Sbjct: 312 IHS-LGFGKNQCQRSPWFPHKLISTSDGI-SVLKIACGQWHTAIISSLGKLYTYGYGTFG 369

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-------LDSS---GYVYTWGK 350
            LGHG+ H  + P+ +++ R  G     V+ G  H  A       L SS   G ++TWG 
Sbjct: 370 VLGHGDTHSVVHPKEVESLR--GSRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGD 427

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LGH ++  K +P  + SL      QV      T VL  TG V+  G    G LG 
Sbjct: 428 AGGGKLGHTNKKSKLVPTRVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLG- 486

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                SD      +   L+   V  IS G  H  V+T  G++F +G     QLG
Sbjct: 487 --NSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLG 538



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           I  PRL+++ + +  + +  G      +T +G V + G    G+LGH  +     PK I 
Sbjct: 220 ISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIID 279

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP----RAIQTFR 320
            L     V  IA G  Y  AV+ +G +Y +G G +  LG G+   +  P    + I T  
Sbjct: 280 SLAST-PVKTIAFGAKYTCAVSVSGELYEWGEGIH-SLGFGKNQCQRSPWFPHKLIST-- 335

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
             GI V++++ G  H   + S G +YT+G G  G LGHGD      P+ + SL+   A  
Sbjct: 336 SDGISVLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLRGSRAKS 395

Query: 381 VCARKRKTFVLVDT----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
           V      T  +V+T          G ++ +G  G G LG  ++      L P  ++SL  
Sbjct: 396 VACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSK---LVPTRVESLID 452

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              +Q+S G+  T V+T  G +F  G  E  QLG+
Sbjct: 453 CDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGN 487



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V++++  + H A +   G+++T G  +    GH DT+  +  P+ VE+L+G   K V  G
Sbjct: 341 VLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHGDTH-SVVHPKEVESLRGSRAKSVACG 399

Query: 226 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
              T  +     T++     G + T G    G+LGH +   +  P  +  L +     Q+
Sbjct: 400 PWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDC-DFTQV 458

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
           + G S    +T  GVV++ GS  +  LG+    +      +     K   V  +S G  H
Sbjct: 459 SCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDN--TSICMVEGPLKTEFVKDISCGSSH 516

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           V  L  +G V+TWGKG  G LG GD +D++ P  + +L+
Sbjct: 517 VAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALE 555



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 20/224 (8%)

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           ++ +V  IA G  +   VT  G V+S+G  +   LGH        P+ I +       V 
Sbjct: 230 QILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSL--ASTPVK 287

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLAV-QVCA 383
            ++ G ++  A+  SG +Y WG+G   +LG G    +     P  L S    ++V ++  
Sbjct: 288 TIAFGAKYTCAVSVSGELYEWGEGI-HSLGFGKNQCQRSPWFPHKLISTSDGISVLKIAC 346

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
            +  T ++   G +Y +G+  FG LG  D   +  V+ P+ ++SLR      ++ G +HT
Sbjct: 347 GQWHTAIISSLGKLYTYGYGTFGVLGHGD---THSVVHPKEVESLRGSRAKSVACGPWHT 403

Query: 444 VVVTDR----------GRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             + +           G+LF +GD    +LGH   +  L PT +
Sbjct: 404 AAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRV 447



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 142/349 (40%), Gaps = 24/349 (6%)

Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVS 170
           N   I  G  H  +++    VFS G    G LGH  +T+  VS  +I +  ++  V  ++
Sbjct: 233 NVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGH--KTSDSVSDPKIIDSLASTPVKTIA 290

Query: 171 ASENHAAFVLQSGQVFTCGDN-SSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNF 228
               +   V  SG+++  G+   S   G     R P F  +L+    G+   ++  G   
Sbjct: 291 FGAKYTCAVSVSGELYEWGEGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWH 350

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTG 287
           T  ++  G ++T G  T G LGHGDT     PK +  L   GS  + +A GP +  A+  
Sbjct: 351 TAIISSLGKLYTYGYGTFGVLGHGDTHSVVHPKEVESLR--GSRAKSVACGPWHTAAIVE 408

Query: 288 N----------GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
                      G ++++G      LGH  +  +L P  +++         +VS G     
Sbjct: 409 TSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESL--IDCDFTQVSCGMSLTA 466

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            L  +G V+T G    G LG+    + ++      LK+     +        VL   G V
Sbjct: 467 VLTITGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKV 526

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           + +G    G LG  D    D+   P ++++L    V  I+     T V 
Sbjct: 527 FTWGKGTEGQLGLGD--YVDRS-SPTLVEALEDKQVDSIACSSNFTAVT 572



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 79/183 (43%), Gaps = 17/183 (9%)

Query: 99  SVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-----------VFSCGSSLCGVLGHGP 147
           SV H  ++          +  G +HT  I  +S           +F+ G +  G LGH  
Sbjct: 378 SVVHPKEVESLRGSRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTN 437

Query: 148 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIF 206
           + ++ V  TR+         QVS   +  A +  +G VFT G       G+ R  N  I 
Sbjct: 438 KKSKLVP-TRVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDNTSIC 496

Query: 207 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
              +VE  LK    K ++ G +    LT+ G V T G  T GQLG GD +DR +P  +  
Sbjct: 497 ---MVEGPLKTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEA 553

Query: 266 LEE 268
           LE+
Sbjct: 554 LED 556



 Score = 40.4 bits (93), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           PR+L S +  +V  I+ G  H  +VT +G++F +G+    +LGH T     +P  I
Sbjct: 223 PRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKII 278


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 137/280 (48%), Gaps = 12/280 (4%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +F PR      G   K+V  G   + FL   G V+TCGSN+ GQLGH     RP      
Sbjct: 22  VFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGAL 81

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
             +++  V   + G ++ LAV   G V+++G+G    LG G   + ++ PR I+      
Sbjct: 82  DAQKISGV---SCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR 138

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I   +V  G+ H +AL   G ++ WG+   G LG G     TL P+PL SL      Q+ 
Sbjct: 139 IS--QVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQIS 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  +G+V+G+G    G LG  D    D+ + P  +  LR+  V  IS G  H
Sbjct: 197 AGGDHSFALSFSGAVFGWGKNSAGQLGLNDE--QDRAV-PCHIKFLRSQKVVYISCGEEH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 482
           T  +T  G LF FG+  + QLGHD+ R   EP    + E+
Sbjct: 254 TAALTKEGGLFTFGNGSKGQLGHDSTRN--EPLPRRVMEL 291



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 148/300 (49%), Gaps = 12/300 (4%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           +V+    H+ F+L  G V+TCG NS   CG    ++   RP LV AL       V+ G  
Sbjct: 38  EVACGNQHSLFLLHDGSVYTCGSNS---CGQLGHDKGGSRPELVGALDAQKISGVSCGQA 94

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
            +  +  +G V   G+   GQLG G   +    P+ I  L E   + Q+  G  + +A++
Sbjct: 95  HSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCE-HRISQVMCGNHHCIALS 153

Query: 287 GNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
            +G ++ +G  S+  LG G+ +   L P+ +++    GI + ++SAG +H  AL  SG V
Sbjct: 154 KDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSL--CGIPLTQISAGGDHSFALSFSGAV 211

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           + WGK   G LG  DE D+ +P  +  L+S   V +   +  T  L   G ++ FG    
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSK 271

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLG 464
           G LG  D   ++ +  PR +  L    VSQI+ G  HT+  V   G ++ FG N + QLG
Sbjct: 272 GQLGH-DSTRNEPL--PRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLG 328



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 141/308 (45%), Gaps = 21/308 (6%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQV 169
           ++  G  H+L L+ + SV++CGS+ CG LGH      PE    +   +I+         V
Sbjct: 38  EVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRPELVGALDAQKIS--------GV 89

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           S  + H+  V + GQVF  G       G       +  PRL++ L      QV  G +  
Sbjct: 90  SCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHC 149

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTG 287
             L+  G +   G N+ GQLG G     P+  S  PL+ +  +   QI+AG  +  A++ 
Sbjct: 150 IALSKDGQLFVWGENSSGQLGLGK--GEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSF 207

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           +G V+ +G  S   LG  ++ D   P  I+  R +   VV +S G+EH  AL   G ++T
Sbjct: 208 SGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQ--KVVYISCGEEHTAALTKEGGLFT 265

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFG 406
           +G G  G LGH    ++ LP  +  L      Q+ C R      +  TG +Y FG    G
Sbjct: 266 FGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQG 325

Query: 407 SLGFPDRG 414
            LG   RG
Sbjct: 326 QLGTGIRG 333



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 7/261 (2%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSASEN 174
           ++ G+ H+L ++    VF+ G+   G LG G    + V   R+      H + QV    +
Sbjct: 89  VSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG-TAEEAVRVPRLIKKLCEHRISQVMCGNH 147

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   + + GQ+F  G+NSS   G          P+ +++L G+P  Q++AG + +  L+ 
Sbjct: 148 HCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSF 207

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N+ GQLG  D  DR  P  I  L     VV I+ G  +  A+T  G +++F
Sbjct: 208 SGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRS-QKVVYISCGEEHTAALTKEGGLFTF 266

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYC 353
           G+GS   LGH    +E  PR +      G  V +++ G  H +A + S+G +Y +G    
Sbjct: 267 GNGSKGQLGHDSTRNEPLPRRVMELM--GTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQ 324

Query: 354 GALGHGDEIDKTLPEPLSSLK 374
           G LG G       P P+S+++
Sbjct: 325 GQLGTGIRGSAKSPVPVSNIQ 345



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI+ G  H+  +S S +VF  G +  G LG   E  + V    I F  +  VV +S  E 
Sbjct: 194 QISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVP-CHIKFLRSQKVVYISCGEE 252

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 232
           H A + + G +FT G+ S    GH  T N P+  PR V  L G    Q+  G N T  F+
Sbjct: 253 HTAALTKEGGLFTFGNGSKGQLGHDSTRNEPL--PRRVMELMGTEVSQIACGRNHTLAFV 310

Query: 233 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKS-IAPL 266
              G ++  G NT GQLG G   +   P P S I PL
Sbjct: 311 PSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPL 347


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  128 bits (322), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 175/354 (49%), Gaps = 16/354 (4%)

Query: 113  NQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
            N M    G +   L ++ S++S G +  G LG G   +  V FT     +     +++A 
Sbjct: 983  NPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNV-FTPTKVDALPPAAKIAAG 1041

Query: 173  ENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            +NHA  +   G V++ G NS      G   T     RP+ + A+  V    +  G + + 
Sbjct: 1042 DNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAA--IACGGSHSL 1099

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             +   G + + G N +GQLG GD   + TP+ +     + +V  IAAG  Y LA+T +G 
Sbjct: 1100 AVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKV---NAISNVAAIAAGEYYSLALTRDGS 1156

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            V+S+G  S+  LG G+  D   P+ ++       +V  ++AG++H +AL   G V++WG+
Sbjct: 1157 VWSWGDNSDGQLGLGDNEDRNTPQKVEVLS----NVAAIAAGEDHSLALTRDGSVWSWGR 1212

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
               G LG  D  D+  P+P++++ +  A+   A    +F + + G  + +G+   G LG 
Sbjct: 1213 NSRGQLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAISEEGLAWAWGYNYDGQLGI 1270

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G       P+ +  +   +V  +S G YH++ +T+ G L+ +GDN+  Q+G
Sbjct: 1271 GTSGSLANENTPQKVKVIS--NVVGLSGGNYHSLALTEDGALWAWGDNDDGQIG 1322



 Score =  112 bits (279), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 27/374 (7%)

Query: 113 NQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
           N M    G +   L ++ SV+S G++  G LG G      V FT  N  +      ++A 
Sbjct: 494 NPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDV-FTPTNVDALPLAASIAAG 552

Query: 173 ENHAAFVLQSGQVFTCGDNS------SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             HA  +   G V++ G NS           +   NRP    + + A+  V    +  G 
Sbjct: 553 GGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRP----QKINAISNVAA--IACGG 606

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           + +  L   G   + G N +GQLG GD + + TP+ +  L    +VV +AAG  + LA+T
Sbjct: 607 SHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS---NVVAMAAGDRHSLALT 663

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++S+G  +   LG G+      PR +        +VV ++AG  H +AL   G V+
Sbjct: 664 LDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAIS----NVVAIAAGYRHSLALTRDGSVW 719

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           +WG    G LG GD  D+  P+P++++ +  A+ V      +  + + G V+ +G+   G
Sbjct: 720 SWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAIAV--GNNYSIAISEEGLVWAWGYNCSG 777

Query: 407 SLGFPDRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL-G 464
            LG    G ++D+    ++   +   +V  +S G  H++ +T+ G L+ +G+NE  Q+  
Sbjct: 778 QLGIGTHGSLADENTPQKV---IVISNVVGLSAGSSHSIALTEDGALWAWGNNEAGQIAA 834

Query: 465 HDTLRGCLEPTEIF 478
            + +     P ++F
Sbjct: 835 EEAIEYIDNPVQVF 848



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 16/257 (6%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           V AG  F+  L   G +   G N +GQLG GD  +R TP     L +V +   IA G  +
Sbjct: 122 VAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAA---IAGGDYH 178

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            LA T +G V++ G   +  LG    H +  P  +        +V  V+AG+   +AL +
Sbjct: 179 ALAATQSGEVWAMGRNDHGQLGFTGDHAD-APVQVAGLS----NVKSVAAGEFFSLALKN 233

Query: 342 SGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
            G V+ WG      LG G   +    P P++ L +  A+   A +R    L + GSV+ +
Sbjct: 234 DGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLSNITAI--AAGRRHAMALAEDGSVWAW 291

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G  G G LGF D         P  + SL    V+ I++G +H++ +T  G L+ +G+N  
Sbjct: 292 GANGSGQLGFGDFETPKA---PGRVSSLA--DVTAIASGWFHSLALTSDGVLWAWGNNGD 346

Query: 461 AQLGHDTLRGCLEPTEI 477
            +LG D       P ++
Sbjct: 347 GRLGTDATSDQSLPAQV 363



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 120/256 (46%), Gaps = 23/256 (8%)

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG----QLGHGDTLDRPTPKSIAPLEEVGS 271
           G P   V AG  F+  L   G V + G+N  G     LG  D +  PT     PL     
Sbjct: 491 GNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPL----- 545

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGS---NFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
              IAAG  + LA+  +G V+S+G  S         G    E +P+ I        +V  
Sbjct: 546 AASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAIS----NVAA 601

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 388
           ++ G  H +AL   G  ++WG  Y G LG GD + KT P  +++L +   V + A  R +
Sbjct: 602 IACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALSN--VVAMAAGDRHS 659

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
             L   GS++ +G   +G LG  D   +D    PR ++++   +V  I+ G  H++ +T 
Sbjct: 660 LALTLDGSLWSWGDNTYGQLGLGD---NDHRNTPRKVNAIS--NVVAIAAGYRHSLALTR 714

Query: 449 RGRLFGFGDNERAQLG 464
            G ++ +G+N R QLG
Sbjct: 715 DGSVWSWGNNTRGQLG 730



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 19/256 (7%)

Query: 216  GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVV 273
            G P   V AG NF+  L   G + + G N  G   LG G +++  TP  +  L       
Sbjct: 980  GNPNPMVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPPAA--- 1036

Query: 274  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ---HDELQPRAIQTFRRKGIHVVRVS 330
            +IAAG ++ LA+  +G V+S+G  S+  LG G       + +P+ I        +V  ++
Sbjct: 1037 KIAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAIS----NVAAIA 1092

Query: 331  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
             G  H +A+   G +++WG  Y G LG GD   KT P+ ++++ +  A  + A +  +  
Sbjct: 1093 CGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAA--IAAGEYYSLA 1150

Query: 391  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
            L   GSV+ +G    G LG  D    +   +  +L      +V+ I+ G  H++ +T  G
Sbjct: 1151 LTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS-----NVAAIAAGEDHSLALTRDG 1205

Query: 451  RLFGFGDNERAQLGHD 466
             ++ +G N R QLG D
Sbjct: 1206 SVWSWGRNSRGQLGLD 1221



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 86/311 (27%), Positives = 135/311 (43%), Gaps = 23/311 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
           P  +++V V+A    +  +   G ++  G N     G  D +  +  P     L  V   
Sbjct: 114 PVVSNIVSVAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRL-TPSKTPGLSDV--- 169

Query: 221 QVTAGLNFTGFL-TIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAG 278
              AG ++     T  G V   G N HGQLG  GD  D P    +A L  V SV   AAG
Sbjct: 170 AAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDHADAPV--QVAGLSNVKSV---AAG 224

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVV 337
             + LA+  +G V+++G+  +  LG G   + +  P  I        ++  ++AG  H +
Sbjct: 225 EFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLS----NITAIAAGRRHAM 280

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           AL   G V+ WG    G LG GD      P  +SSL    A  + +    +  L   G +
Sbjct: 281 ALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSLADVTA--IASGWFHSLALTSDGVL 338

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           + +G  G G LG      SD+ L P  + S+   +    + G  H++ +   G ++ +G 
Sbjct: 339 WAWGNNGDGRLG--TDATSDQSL-PAQVSSIS--NAVSFAGGQRHSLAIAADGSVWSWGG 393

Query: 458 NERAQLGHDTL 468
           N   QLG ++L
Sbjct: 394 NAYGQLGVESL 404



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 12/190 (6%)

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           +A+   + LA+ G+G V+ +G      LG G+  + L P           ++V V+AG  
Sbjct: 72  VASRLDHSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVS----NIVSVAAGRL 127

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
             +AL S G ++ WG  Y G LG GD  ++  P     L    A  +            +
Sbjct: 128 FSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVAA--IAGGDYHALAATQS 185

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G V+  G    G LGF      D    P  +  L   +V  ++ G + ++ + + G ++ 
Sbjct: 186 GEVWAMGRNDHGQLGF----TGDHADAPVQVAGLS--NVKSVAAGEFFSLALKNDGTVWA 239

Query: 455 FGDNERAQLG 464
           +G+NE AQLG
Sbjct: 240 WGNNESAQLG 249


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 160/347 (46%), Gaps = 21/347 (6%)

Query: 122 YHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           YH+L L S+ +V++ G +  G LG   +T+     +    P  A   +++A   H+  + 
Sbjct: 460 YHSLALRSDGTVWAWGDNAYGQLG---DTSGGRRPSPAQVPGVAGATEIAAGTYHSLALR 516

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             G V+T GDNS    G   T R    P +V  L  +    V AGL  +  L   G V  
Sbjct: 517 SDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPGLAVI--THVAAGLFHSLALDSSGQVWA 574

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
            G N +GQLG G T  R  P  ++ L     +  I AGPSY +A+  +G V+++G  SN 
Sbjct: 575 WGDNVYGQLGDGSTTSRNVPGRVSGLPA--GIQAIVAGPSYSVALGADGSVWTWGENSNG 632

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LG G       P  +         +V +S    H VALD++G ++ WG+   G LG+G 
Sbjct: 633 QLGDGTTTARPVPARVSLP----ATLVALSTRGSHTVALDTTGMLWAWGRNVSGQLGNGT 688

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARK-RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
            + ++ P  + S      VQ  A   R TF L   G+V+ +G    G LG      S   
Sbjct: 689 LVSESTPRRVPSFAR---VQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSAS--- 742

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
             P  + ++       +++G  H + V+  G +F FG N R QLG++
Sbjct: 743 --PVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYE 787



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 158/350 (45%), Gaps = 23/350 (6%)

Query: 126  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
            L ++ +V++ G +  G LG+G  +   V    + +P     V +++   H   V   G V
Sbjct: 717  LRADGTVWAWGDNSLGQLGNGATSASPVPVQAVGYP---RTVPLASGAQHVLAVSSDGSV 773

Query: 186  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTAGLNFTGFLTIRGHVHTCGSN 244
            F+ G NS    G+  +      PR    L G  C + V AG  F+  L+  G V   G N
Sbjct: 774  FSFGSNSRGQLGYEGSATQT-SPRW---LTGPECIEAVAAGALFSLALSCDGGVWAWGDN 829

Query: 245  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
              GQLG G    R  P  +  L  V   V IAAG  + LAV  +G V+++G+  +  LG 
Sbjct: 830  GSGQLGDGAVTARTAPARVPGLAHV---VAIAAGSDHALAVRADGTVWAWGANGSGQLGD 886

Query: 305  GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
            G       P  ++      + VV V+ G  H +A+ + G V+ WG    G LG G    +
Sbjct: 887  GTTTSRAVPMQVKEL----VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSR 942

Query: 365  TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
            TLP  +S+L    A+   A+   +  L + G V+ +G  G G LG    G +    RP  
Sbjct: 943  TLPVFVSTLSGVQAIASGAQH--SLALAEGGVVWAWGANGSGQLG---DGTTTSRTRPVQ 997

Query: 425  LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +  L    V  +  G   ++ +T  G+++ +G+N   QLG  TL    +P
Sbjct: 998  VSGLSG--VQGLVAGASFSLALTP-GKVWSWGNNSAGQLGDGTLNSRSQP 1044



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 173/415 (41%), Gaps = 66/415 (15%)

Query: 111 AGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 170
           AG Q  +    Y   L ++ SV++ G +  G LG G  T + V   R++ P  A +V +S
Sbjct: 602 AGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTTARPVP-ARVSLP--ATLVALS 658

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
              +H   +  +G ++  G N S   G+  T      PR V +   V  +   +GL  T 
Sbjct: 659 TRGSHTVALDTTGMLWAWGRNVSGQLGN-GTLVSESTPRRVPSFARV--QGFASGLRTTF 715

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGN 288
            L   G V   G N+ GQLG+G T   P P     ++ VG    V +A+G  ++LAV+ +
Sbjct: 716 ALRADGTVWAWGDNSLGQLGNGATSASPVP-----VQAVGYPRTVPLASGAQHVLAVSSD 770

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPR-------------------------AIQTFRRKG 323
           G V+SFGS S   LG+     +  PR                          +  +   G
Sbjct: 771 GSVFSFGSNSRGQLGYEGSATQTSPRWLTGPECIEAVAAGALFSLALSCDGGVWAWGDNG 830

Query: 324 ---------------------IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
                                 HVV ++AG +H +A+ + G V+ WG    G LG G   
Sbjct: 831 SGQLGDGAVTARTAPARVPGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTT 890

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            + +P  +  L     V V      +  +   G+V+ +G  G G LG  D   + + L P
Sbjct: 891 SRAVPMQVKELVD--VVAVAGGSGHSLAVRADGTVWAWGANGSGQLG--DGTTTSRTL-P 945

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             + +L    V  I++G  H++ + + G ++ +G N   QLG  T      P ++
Sbjct: 946 VFVSTLSG--VQAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQV 998



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 154/340 (45%), Gaps = 25/340 (7%)

Query: 133 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 192
              G++  G LG+G  + + +       PS      ++A ++H       G V+  GDN+
Sbjct: 371 LGWGANGSGQLGNGSSSVRALPG---RVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNT 427

Query: 193 SFCCGHRDTNRPIFRP---RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
               G       + RP   RL   L  V  + ++A    +  L   G V   G N +GQL
Sbjct: 428 ---YGQLGDGTLVSRPAPVRLSSTLTSV--RALSASSYHSLALRSDGTVWAWGDNAYGQL 482

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G      RP+P   A +  V    +IAAG  + LA+  +G V+++G  S   LG G    
Sbjct: 483 GDTSGGRRPSP---AQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGAT-- 537

Query: 310 ELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
              PRA       G+ V+  V+AG  H +ALDSSG V+ WG    G LG G    + +P 
Sbjct: 538 PRGPRAPAVV--PGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPG 595

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            +S L + +   + A    +  L   GSV+ +G    G LG  D   + + +  R+  SL
Sbjct: 596 RVSGLPAGIQA-IVAGPSYSVALGADGSVWTWGENSNGQLG--DGTTTARPVPARV--SL 650

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
            A  V+ +ST   HTV +   G L+ +G N   QLG+ TL
Sbjct: 651 PATLVA-LSTRGSHTVALDTTGMLWAWGRNVSGQLGNGTL 689



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 162/415 (39%), Gaps = 73/415 (17%)

Query: 117 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 176
           I  G  H+L + N +V++ G++  G LG G  T++    T         VV ++A + H+
Sbjct: 152 IAAGNLHSLALINGAVWAWGNNTTGQLGDGSSTSRS---TPAKVAGLTEVVAIAAGDFHS 208

Query: 177 AFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             + + G V+  G N S   G      R T   +     + AL G     V A       
Sbjct: 209 LALKRDGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASST---- 264

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNG 289
            T+ G V   G NT+GQLG+G  +      S+ PLE  G   VV +A+G S+ LA+ G+ 
Sbjct: 265 -TLGGKVWAWGDNTYGQLGNGGDV-----SSLLPLEVPGLTQVVALASGTSHSLALRGDD 318

Query: 290 VVYSFGS----------------------------------------GSNFCLGHGEQHD 309
            V+++G                                         G N  LG G    
Sbjct: 319 SVWAWGDNAQAQTAQTGTSVQRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGS 378

Query: 310 ELQPRAIQTFRRKGIHV------VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
                   + R     V        ++AGD HV    + G V+ WG    G LG G  + 
Sbjct: 379 GQLGNGSSSVRALPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVS 438

Query: 364 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
           +  P  LSS  + +   + A    +  L   G+V+ +G   +G LG    G      RP 
Sbjct: 439 RPAPVRLSSTLTSVRA-LSASSYHSLALRSDGTVWAWGDNAYGQLGDTSGG-----RRPS 492

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD-TLRGCLEPTEI 477
                     ++I+ G YH++ +   G ++ +GDN   QLG   T RG   P  +
Sbjct: 493 PAQVPGVAGATEIAAGTYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVV 547



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 26/300 (8%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           +++A  NH+ +V  +G V+  G N+    G   T +    P  V  L GV    V AG  
Sbjct: 52  RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQ-HSTPTQVVGLTGVTA--VAAGNT 108

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  L   G V T G+NT GQLG G +  R  P  +A L     V  IAAG  + LA+  
Sbjct: 109 HSMALREEGTVWTWGTNTDGQLGDGVS-QRSVPAQVAGLT---GVTAIAAGNLHSLALI- 163

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           NG V+++G+ +   LG G       P  +         VV ++AGD H +AL   G V+ 
Sbjct: 164 NGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGL----TEVVAIAAGDFHSLALKRDGTVWA 219

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-----VCARKRKTFVLVDTGSVYGFGW 402
           WG  Y G LG G    ++ P  +S L   +A+        A    T      G V+ +G 
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTL----GGKVWAWGD 275

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
             +G LG    G     L P  +  L    V  +++G  H++ +     ++ +GDN +AQ
Sbjct: 276 NTYGQLG---NGGDVSSLLPLEVPGLT--QVVALASGTSHSLALRGDDSVWAWGDNAQAQ 330



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 20/268 (7%)

Query: 213 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           +++G P + + AGLN + ++T  G V   G+N  GQLG G TL   TP  +  L     V
Sbjct: 45  SVQGRPYR-LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVGLT---GV 100

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
             +AAG ++ +A+   G V+++G+ ++  LG     D +  R++         V  ++AG
Sbjct: 101 TAVAAGNTHSMALREEGTVWTWGTNTDGQLG-----DGVSQRSVPAQVAGLTGVTAIAAG 155

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           + H +AL + G V+ WG    G LG G    ++ P  ++ L     V + A    +  L 
Sbjct: 156 NLHSLALIN-GAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTE--VVAIAAGDFHSLALK 212

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR--- 449
             G+V+ +G    G LG    G  D    P  +  L    +  ++ G  H+V  +     
Sbjct: 213 RDGTVWAWGGNYSGQLG---DGTLDSRSTPVRVSGLTG--IVALAGGGSHSVAASSTTLG 267

Query: 450 GRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           G+++ +GDN   QLG+      L P E+
Sbjct: 268 GKVWAWGDNTYGQLGNGGDVSSLLPLEV 295



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 145/347 (41%), Gaps = 30/347 (8%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            + + +G  H L +S + SVFS GS+  G LG+    TQ    T   + +    ++  A+ 
Sbjct: 755  VPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQ----TSPRWLTGPECIEAVAAG 810

Query: 174  NHAAFVLQ-SGQVFTCGDNSSFCCGHRD-TNR--PIFRPRLVEALKGVPCKQVTAGLNFT 229
               +  L   G V+  GDN S   G    T R  P   P L   +       + AG +  
Sbjct: 811  ALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPARVPGLAHVVA------IAAGSDHA 864

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              +   G V   G+N  GQLG G T  R  P  +   +E+  VV +A G  + LAV  +G
Sbjct: 865  LAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQV---KELVDVVAVAGGSGHSLAVRADG 921

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             V+++G+  +  LG G       P  + T       V  +++G +H +AL   G V+ WG
Sbjct: 922  TVWAWGANGSGQLGDGTTTSRTLPVFVSTLS----GVQAIASGAQHSLALAEGGVVWAWG 977

Query: 350  KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
                G LG G    +T P  +S L     VQ         + +  G V+ +G    G LG
Sbjct: 978  ANGSGQLGDGTTTSRTRPVQVSGLS---GVQGLVAGASFSLALTPGKVWSWGNNSAGQLG 1034

Query: 410  FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
                G  +   +P    +L +     +S G  HTVV+        +G
Sbjct: 1035 ---DGTLNSRSQPGAGPTLSSFVA--LSAGAQHTVVLRSDDSFLSWG 1076


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 171/349 (48%), Gaps = 17/349 (4%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +F  GS++ G LG G    + +   R ++F  A++V Q++  EN+   + + G+V++CG+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N     GH    +   R +L+  L     +++  G   T  +   G + + G N +GQLG
Sbjct: 61  NDYGQLGHEKARK---RLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLG 117

Query: 251 HG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 307
               D  +R  P+ I  L     +VQIA G  + +A+T +G +Y++GS     LG G   
Sbjct: 118 LNSVDCTER-VPRMIKVL-GTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYT 175

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             E++P+ I T     + +  ++ G  H + +  SG V++WG+   G LG  D   + LP
Sbjct: 176 TTEIKPKRISTL--AAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLP 233

Query: 368 EPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
             L +L+ + +    C  +   F+ +D G V+  G   +G LG    G +   + PR + 
Sbjct: 234 CQLRTLRNAKVCYATCGEEFSVFLTMD-GGVFTCGAGMYGQLG---HGNTTNEILPRQVM 289

Query: 427 SLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L    V+QIS G  HT+ +V  RGR++ +G     QLG+   +    P
Sbjct: 290 ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTP 338



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 140/308 (45%), Gaps = 11/308 (3%)

Query: 105 DIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 163
           D +E  A N  QI  G  +T+ I+    V+SCG++  G LGH     +      ++   A
Sbjct: 29  DFIE--ASNVEQIACGENYTVAITKEGKVYSCGNNDYGQLGHEKARKRLQLIPGLD---A 83

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
               +++    H   V + GQ+F+ G N +   G    +     PR+++ L      Q+ 
Sbjct: 84  FVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIA 143

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  LT  G ++  GSN  GQLG G  T     PK I+ L  V  +  IA G  + 
Sbjct: 144 CGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAV-PIAFIACGGYHT 202

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           + ++ +G V+S+G  +   LG  +      P  ++T R     V   + G+E  V L   
Sbjct: 203 IVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNA--KVCYATCGEEFSVFLTMD 260

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFG 401
           G V+T G G  G LGHG+  ++ LP  +  L      Q+   KR T  LV + G VY +G
Sbjct: 261 GGVFTCGAGMYGQLGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWG 320

Query: 402 WMGFGSLG 409
             G G LG
Sbjct: 321 LGGAGQLG 328



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 7/256 (2%)

Query: 116 QITTGRYHTLLISN-SSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +I  G  HTL ++    +FS G ++ G LG +  + T+ V    I       +VQ++   
Sbjct: 88  KIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVDCTERVP-RMIKVLGTNVIVQIACGT 146

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +   G+++  G N     G         +P+ +  L  VP   +  G   T  ++
Sbjct: 147 EHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVIS 206

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V + G NT GQLG  D   R  P  +  L     V     G  + + +T +G V++
Sbjct: 207 KSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRN-AKVCYATCGEEFSVFLTMDGGVFT 265

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGY 352
            G+G    LGHG   +E+ PR  Q     G  V ++S G  H +AL  S G VY WG G 
Sbjct: 266 CGAGMYGQLGHGNTTNEILPR--QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGG 323

Query: 353 CGALGHGDEIDKTLPE 368
            G LG+      T P+
Sbjct: 324 AGQLGNRASQSATTPQ 339



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 7/235 (2%)

Query: 86  CNGNWKRVLRFLQSVEHSSDIVETSAGNQM-QITTGRYHTLLISNS-SVFSCGSSLCGVL 143
           CN N +  L  +   E    +++    N + QI  G  H++ ++N   +++ GS+  G L
Sbjct: 110 CNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQL 169

Query: 144 GHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 203
           G G  TT  +   RI+  +A  +  ++    H   + +SG VF+ G N+    G  D  +
Sbjct: 170 GLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQ 229

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
               P  +  L+       T G  F+ FLT+ G V TCG+  +GQLGHG+T +   P+ +
Sbjct: 230 RNL-PCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQV 288

Query: 264 APLEEVGS-VVQIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 316
             +E +GS V QI+ G  + LA V   G VY++G G    LG+        P+ +
Sbjct: 289 --MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3994 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4052

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4053 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4111

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4112 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4168

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4169 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4226

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4227 GQDRLIGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4286

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4287 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4322



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3987 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4044

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4045 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4103

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4104 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4161

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4162 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4221

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4222 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAW 4278

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4279 GSNSEGQLGLGHTNHVREPT 4298



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3962 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4016

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4017 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4076

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4077 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4134

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4135 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4183



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3962 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4018

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4019 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4075

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4076 KLGHGNSDRQRRPRQIEALQGEE 4098


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4315

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 163/352 (46%), Gaps = 20/352 (5%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           M+I  G  H+L +S   +V++ G +  G LG   E T          PS   +V V + E
Sbjct: 52  MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGG--EATPLQRLAPAPLPSPRDIVSVVSGE 109

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  + ++G V+  G NSS   G   T   +  P  V  L  V    V AG   +  L 
Sbjct: 110 AHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVT-PMQVAGLTDVVA--VAAGDFHSLALR 166

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G+N HGQLG G T    TP+ +  LE    VV +AAG  + LAV  +G V +
Sbjct: 167 GDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLE---GVVALAAGFDFTLAVMDDGTVRA 223

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+ S+  LG G     L P  ++     GI  V  +AG  H VAL   G V+TWG    
Sbjct: 224 WGANSSGQLGDGTFTQRLAP--VEVAHISGISAV--TAGTYHAVALGKDGGVWTWGANSS 279

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G   D+ +P  +  L+   A  V +    +  L++ GSV  +G  G G LG  D 
Sbjct: 280 GQLGDGAWSDRAVPARVPGLERVKA--VASMDASSLALLEAGSVLAWGANGSGQLG--DS 335

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G  D+   P  +  LR+  V+ +  G  H + +   G L+ +G     QLGH
Sbjct: 336 GTDDRAT-PGEVPGLRS--VAAVVGGAQHALALRGDGTLWAWGGGLAGQLGH 384



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 173/372 (46%), Gaps = 25/372 (6%)

Query: 117  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            ++ GR  +L +  + + ++ G++  G LG G   +Q V        S   V  +SA  +H
Sbjct: 955  VSAGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPK---QVTSVKRVRAMSAGAHH 1011

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
               + + G V+T GDN+    G   +      PR V  L+ V  + V AG  F+  + + 
Sbjct: 1012 VVALGEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPELRDV--EAVAAGEQFSVAVLVG 1069

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G  H  GSN +GQLG G T  R TP  +    + L +   V  + A   + +A+  +G V
Sbjct: 1070 GGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQ--PVRTVRAWAQHAVALMADGTV 1127

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
             ++G  ++  LG G       P  ++        VV VS G  H +AL S G V+ WG  
Sbjct: 1128 QAWGDNAHGQLGDGTTERRAAPVVVRGL----TGVVAVSTGAWHSLALRSDGTVWAWGAN 1183

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
              G LG G  + +T P  ++ L+    V + A       +   GSV+ +G+  FG LG  
Sbjct: 1184 GFGQLGDGTTLSRTTPVRVAGLQK--VVAIGAGGYHALAVRSDGSVWAWGYNAFGQLG-- 1239

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
              G ++  L P  ++ L   +V+ ++ G +H++ +   G L  +G+N   QLG  T  G 
Sbjct: 1240 -DGTAESRLLPVRVEGL--SNVTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGT--GT 1294

Query: 472  LEPTEIFIQEME 483
               + ++++ ++
Sbjct: 1295 TRYSRVWVKGVD 1306



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 117 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G +H+L  + + +V+S G +  G LG G   T       +     + +  V+AS +H
Sbjct: 405 MAAGSFHSLAALGDGTVWSWGRNTYGQLGDG---TTAERHAAVRVEGLSGIRGVAASGHH 461

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  V   G V+  G N++   G   T R   RP  V  L  V    V  G + T  L   
Sbjct: 462 SLAVGADGTVWAWGRNAAGQLGDGST-RDRARPVAVSGLTSVVA--VATGGSHTMALRGD 518

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   G N  GQLG G T+DR TP  +A L+   SVV +AAG  + +A+ G+G V+++G
Sbjct: 519 GTVWAWGYNALGQLGDGTTVDRLTPVRVARLD---SVVAVAAGTYFSMALRGDGTVWTWG 575

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G    +G G     L P  +        +V RV+AG  H +A+   G V+ WG    G 
Sbjct: 576 EGFEGQVGDGGGVQRLFPVQVAGL----TNVTRVAAGSAHALAVRGDGTVWAWGDNGEGQ 631

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G   D+  P  +  L    A  V   +  +  L   GSV  +G+ G+G LG    G 
Sbjct: 632 LGDGTWSDRFRPVQVPGLTGITA--VSGGRSHSMALHGDGSVRAWGYNGYGQLG---DGT 686

Query: 416 SDKVLRPRI---LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
               +RP +   L  ++A H S +     H + +   G L G+G N   QLG        
Sbjct: 687 FTSRVRPAVVPGLTGIQALHPSHL-----HVLALHADGTLRGWGYNRFGQLGLGAAGWSS 741

Query: 473 EPTEI 477
            P ++
Sbjct: 742 RPVQV 746



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 167/395 (42%), Gaps = 34/395 (8%)

Query: 96   FLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQC 152
            + + V    D+   +AG Q  +        ++      + GS+  G LG G   P  T  
Sbjct: 1043 WPRQVPELRDVEAVAAGEQFSVA-------VLVGGGAHAWGSNEYGQLGDGKTGPRLTPV 1095

Query: 153  ---VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
               +  +++  P    V  V A   HA  ++  G V   GDN+    G   T R    P 
Sbjct: 1096 QVRIEASKLRQP----VRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAA-PV 1150

Query: 210  LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            +V  L GV    V+ G   +  L   G V   G+N  GQLG G TL R TP  +A L++V
Sbjct: 1151 VVRGLTGVVA--VSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQKV 1208

Query: 270  GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
               V I AG  + LAV  +G V+++G  +   LG G     L P  ++       +V  V
Sbjct: 1209 ---VAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGLS----NVTSV 1261

Query: 330  SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
            + GD H +AL + G +  WG    G LG G    +     +  +     V+V A    T 
Sbjct: 1262 AGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDG--VVEVRAGAAHTL 1319

Query: 390  VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
             L   G+V+ +G      LG  D     +++ PR +  L    V+ I  G  H+  V  +
Sbjct: 1320 ALRGDGTVWTWGDNTHSQLGAGDDSTRTRIV-PRPVPGLSG--VTAIGAGARHSFAVGPK 1376

Query: 450  GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
            G ++ +G N   QLG        EP  + ++E+ E
Sbjct: 1377 GTVWAWGRNSHGQLGLGDNANRAEP--LRVKELAE 1409



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 160/370 (43%), Gaps = 23/370 (6%)

Query: 113  NQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
            N M +  G  H L    + ++++ G++  G LG G  T    S T +       V  VSA
Sbjct: 901  NIMSVALGETHGLAAGEDGALWAWGANGSGQLGEGSTTP---SPTPVRVKGLEGVASVSA 957

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
                +  V Q G  +  G N S   G   TN     P+ V ++K V  + ++AG +    
Sbjct: 958  GRAFSLAVRQDGTAWAWGANPSGQLGD-GTNHSQRVPKQVTSVKRV--RAMSAGAHHVVA 1014

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L   G V T G NT GQLG G +   PT   P+ +  L +V +V   AAG  + +AV   
Sbjct: 1015 LGEDGAVWTWGDNTLGQLGDGTSA--PTWMWPRQVPELRDVEAV---AAGEQFSVAVLVG 1069

Query: 289  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYT 347
            G  +++GS     LG G+    L P  ++    K    VR V A  +H VAL + G V  
Sbjct: 1070 GGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQA 1129

Query: 348  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
            WG    G LG G    +  P  +  L   +AV   A    +  L   G+V+ +G  GFG 
Sbjct: 1130 WGDNAHGQLGDGTTERRAAPVVVRGLTGVVAVSTGAWH--SLALRSDGTVWAWGANGFGQ 1187

Query: 408  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
            LG    G +     P  +  L+   V  I  G YH + V   G ++ +G N   QLG  T
Sbjct: 1188 LG---DGTTLSRTTPVRVAGLQ--KVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGT 1242

Query: 468  LRGCLEPTEI 477
                L P  +
Sbjct: 1243 AESRLLPVRV 1252



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 158/355 (44%), Gaps = 21/355 (5%)

Query: 117  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            + +G  H+L ++ + SV++ G++  G LG G   ++ +   R++    A  V      + 
Sbjct: 805  VASGVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIP-ARVDGLQGAVAVAAGGDASL 863

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI- 234
            A  +L  G  +  G N+    G   T+      R V     +P   ++  L  T  L   
Sbjct: 864  A--LLADGTAWAWGANAHGQLGDGSTSD-----RAVPGQLKLPSNIMSVALGETHGLAAG 916

Query: 235  -RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G +   G+N  GQLG G T   PTP  +  LE V SV   +AG ++ LAV  +G  ++
Sbjct: 917  EDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLEGVASV---SAGRAFSLAVRQDGTAWA 973

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            +G+  +  LG G  H +  P+ + + +R    V  +SAG  HVVAL   G V+TWG    
Sbjct: 974  WGANPSGQLGDGTNHSQRVPKQVTSVKR----VRAMSAGAHHVVALGEDGAVWTWGDNTL 1029

Query: 354  GALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G      + P  +  L+   A  V A ++ +  ++  G  + +G   +G LG   
Sbjct: 1030 GQLGDGTSAPTWMWPRQVPELRDVEA--VAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGK 1087

Query: 413  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
             G     ++ RI  S     V  +     H V +   G +  +GDN   QLG  T
Sbjct: 1088 TGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGT 1142



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 115/251 (45%), Gaps = 19/251 (7%)

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQI 275
            P  ++ AG   + +++  G V   G NT GQLG   T L R  P   APL     +V +
Sbjct: 49  APPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAP---APLPSPRDIVSV 105

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
            +G ++ LA+   G V+++G  S+  LG G   D + P  +         VV V+AGD H
Sbjct: 106 VSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGL----TDVVAVAAGDFH 161

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +AL   G V+ WG  + G LG G       PEP+  L+    V + A    T  ++D G
Sbjct: 162 SLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEG--VVALAAGFDFTLAVMDDG 219

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH--HVSQISTGLYHTVVVTDRGRLF 453
           +V  +G    G LG       D     R+     AH   +S ++ G YH V +   G ++
Sbjct: 220 TVRAWGANSSGQLG-------DGTFTQRLAPVEVAHISGISAVTAGTYHAVALGKDGGVW 272

Query: 454 GFGDNERAQLG 464
            +G N   QLG
Sbjct: 273 TWGANSSGQLG 283



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 156/367 (42%), Gaps = 22/367 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
            ++  GR HTL++  + +V + G +  G LG G  T +         P    V  V++   
Sbjct: 754  RLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAGPVLVRGVPC---VRSVASGVL 810

Query: 175  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
            H+  +   G V+  G N     G   T   +  P  V+ L+G          +    L  
Sbjct: 811  HSLALACDGSVWAWGANGRGQLGDGTTASRVI-PARVDGLQGAVAVAAGGDASLA--LLA 867

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
             G     G+N HGQLG G T DR  P     L+   +++ +A G ++ LA   +G ++++
Sbjct: 868  DGTAWAWGANAHGQLGDGSTSDRAVPGQ---LKLPSNIMSVALGETHGLAAGEDGALWAW 924

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            G+  +  LG G       P      R KG+  V  VSAG    +A+   G  + WG    
Sbjct: 925  GANGSGQLGEGSTTPSPTP-----VRVKGLEGVASVSAGRAFSLAVRQDGTAWAWGANPS 979

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            G LG G    + +P+ ++S+K   A+   A       L + G+V+ +G    G LG  D 
Sbjct: 980  GQLGDGTNHSQRVPKQVTSVKRVRAMSAGAHH--VVALGEDGAVWTWGDNTLGQLG--DG 1035

Query: 414  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
              +   + PR +  LR   V  ++ G   +V V   G    +G NE  QLG       L 
Sbjct: 1036 TSAPTWMWPRQVPELR--DVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLT 1093

Query: 474  PTEIFIQ 480
            P ++ I+
Sbjct: 1094 PVQVRIE 1100



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 149/356 (41%), Gaps = 28/356 (7%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L+   SV + G++  G LG      +    T    P    V  V     HA  +   G +
Sbjct: 315 LLEAGSVLAWGANGSGQLGDSGTDDRA---TPGEVPGLRSVAAVVGGAQHALALRGDGTL 371

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-RGHVHTCGSN 244
           +  G   +   GH  + R +    L   L+      + AG +F     +  G V + G N
Sbjct: 372 WAWGGGLAGQLGHGGSERHVVPAPL---LRLADVASMAAG-SFHSLAALGDGTVWSWGRN 427

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
           T+GQLG G T +R    +   +E +  +  +AA   + LAV  +G V+++G  +   LG 
Sbjct: 428 TYGQLGDGTTAER---HAAVRVEGLSGIRGVAASGHHSLAVGADGTVWAWGRNAAGQLGD 484

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   D  +P A+         VV V+ G  H +AL   G V+ WG    G LG G  +D+
Sbjct: 485 GSTRDRARPVAVSGL----TSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVDR 540

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV---LR 421
             P  ++ L S   V V A    +  L   G+V+ +G       GF  +         L 
Sbjct: 541 LTPVRVARLDS--VVAVAAGTYFSMALRGDGTVWTWG------EGFEGQVGDGGGVQRLF 592

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           P  +  L   +V++++ G  H + V   G ++ +GDN   QLG  T      P ++
Sbjct: 593 PVQVAGLT--NVTRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQV 646



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 140/320 (43%), Gaps = 23/320 (7%)

Query: 166  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTA 224
            V +++    H   V   G V   G+N+S   G   T      P LV   +GVPC + V +
Sbjct: 752  VDRLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAG-PVLV---RGVPCVRSVAS 807

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            G+  +  L   G V   G+N  GQLG G T  R  P  +  L+   +V          LA
Sbjct: 808  GVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG---DASLA 864

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +  +G  +++G+ ++  LG G   D    RA+    +   +++ V+ G+ H +A    G 
Sbjct: 865  LLADGTAWAWGANAHGQLGDGSTSD----RAVPGQLKLPSNIMSVALGETHGLAAGEDGA 920

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            ++ WG    G LG G       P  +  L+      V A +  +  +   G+ + +G   
Sbjct: 921  LWAWGANGSGQLGEGSTTPSPTPVRVKGLEG--VASVSAGRAFSLAVRQDGTAWAWGANP 978

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             G LG    G +     P+ + S++   V  +S G +H V + + G ++ +GDN   QLG
Sbjct: 979  SGQLG---DGTNHSQRVPKQVTSVK--RVRAMSAGAHHVVALGEDGAVWTWGDNTLGQLG 1033

Query: 465  HDTLRGCLEPTEIFIQEMEE 484
                 G   PT ++ +++ E
Sbjct: 1034 D----GTSAPTWMWPRQVPE 1049



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 119/256 (46%), Gaps = 16/256 (6%)

Query: 115  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            + I  G YH L + S+ SV++ G +  G LG G   ++ +    +     ++V  V+  +
Sbjct: 1209 VAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLP---VRVEGLSNVTSVAGGD 1265

Query: 174  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            +H+  +L  G +   G+N++   G   T    +    V+ + GV   +V AG   T  L 
Sbjct: 1266 HHSLALLADGSLGAWGNNAAGQLGD-GTGTTRYSRVWVKGVDGV--VEVRAGAAHTLALR 1322

Query: 234  IRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
              G V T G NTH QLG GD  T  R  P+   P+  +  V  I AG  +  AV   G V
Sbjct: 1323 GDGTVWTWGDNTHSQLGAGDDSTRTRIVPR---PVPGLSGVTAIGAGARHSFAVGPKGTV 1379

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            +++G  S+  LG G+  +  +P  ++        V  VS G +  +A+   G V +WG  
Sbjct: 1380 WAWGRNSHGQLGLGDNANRAEPLRVKEL----AEVSVVSGGADFSLAMQRDGTVSSWGSS 1435

Query: 352  YCGALGHGDEIDKTLP 367
              GALG G    ++ P
Sbjct: 1436 LHGALGLGTAGQRSSP 1451



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 102/225 (45%), Gaps = 14/225 (6%)

Query: 255 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQ 312
           L++P       +      ++IAAG  + L V+  G V+++G  ++  LG GE      L 
Sbjct: 34  LEQPRAARTQRITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLG-GEATPLQRLA 92

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P  + + R     +V V +G+ H +ALD +G V+ WG    G LG G   D+  P  ++ 
Sbjct: 93  PAPLPSPR----DIVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAG 148

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L     V V A    +  L   G+V+ +G    G LG   RG ++  L P  +  L    
Sbjct: 149 LTD--VVAVAAGDFHSLALRGDGTVWAWGTNFHGQLG---RGHTEPGLTPEPVPGLEG-- 201

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           V  ++ G   T+ V D G +  +G N   QLG  T    L P E+
Sbjct: 202 VVALAAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEV 246



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 154/368 (41%), Gaps = 29/368 (7%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + + TG  HT+ L  + +V++ G +  G LG G   T     T +       VV V+A  
Sbjct: 503 VAVATGGSHTMALRGDGTVWAWGYNALGQLGDG---TTVDRLTPVRVARLDSVVAVAAGT 559

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  +   G V+T G+      G     + +F P  V  L  V   +V AG      L 
Sbjct: 560 YFSMALRGDGTVWTWGEGFEGQVGDGGGVQRLF-PVQVAGLTNV--TRVAAGSAHA--LA 614

Query: 234 IRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +RG   V   G N  GQLG G   DR  P  +  L     +  ++ G S+ +A+ G+G V
Sbjct: 615 VRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLT---GITAVSGGRSHSMALHGDGSV 671

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            ++G      LG G     ++P  +      GI  +  S    HV+AL + G +  WG  
Sbjct: 672 RAWGYNGYGQLGDGTFTSRVRPAVVPGL--TGIQALHPS--HLHVLALHADGTLRGWGYN 727

Query: 352 YCGALGHGDEIDKTLPEPLSSLK--SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G     + P  +  L     LAV     +  T ++   G+V  +G    G LG
Sbjct: 728 RFGQLGLGAAGWSSRPVQVRGLGRVDRLAVG----RAHTLMVRPDGAVLAWGENASGQLG 783

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
               G +     P ++  +    V  +++G+ H++ +   G ++ +G N R QLG  T  
Sbjct: 784 ---DGTTTHRAGPVLVRGVPC--VRSVASGVLHSLALACDGSVWAWGANGRGQLGDGTTA 838

Query: 470 GCLEPTEI 477
             + P  +
Sbjct: 839 SRVIPARV 846



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 78/202 (38%), Gaps = 53/202 (26%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
            N   +  G +H+L L+++ S+ + G++  G LG G  TT+   ++R+       VV+V A
Sbjct: 1257 NVTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTR---YSRVWVKGVDGVVEVRA 1313

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGV------------- 217
               H   +   G V+T GDN+    G   D+ R    PR V  L GV             
Sbjct: 1314 GAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAIGAGARHSFAV 1373

Query: 218  ---------------------------PCKQ--------VTAGLNFTGFLTIRGHVHTCG 242
                                       P +         V+ G +F+  +   G V + G
Sbjct: 1374 GPKGTVWAWGRNSHGQLGLGDNANRAEPLRVKELAEVSVVSGGADFSLAMQRDGTVSSWG 1433

Query: 243  SNTHGQLGHGDTLDRPTPKSIA 264
            S+ HG LG G    R +P  +A
Sbjct: 1434 SSLHGALGLGTAGQRSSPGQVA 1455


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HAA V ++G VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNVDFVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T  G ++T G  TH  G LGHG       PK I+   +   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTA 197

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 340
            +T  G +++FG GS   LGHG       P+ +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 341 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLT 315

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V   G   +G LG P+   SD  L   + D +   HV Q++ G YH  V+T R  +
Sbjct: 316 TSGKVLSMGNSVYGQLGNPN---SDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEV 372

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEI 477
           F +G     +LGH  +     PT++
Sbjct: 373 FTWGKGANGRLGHGDIEDRKVPTQV 397



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 127/284 (44%), Gaps = 19/284 (6%)

Query: 106 IVET-SAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ +A N   +  G +HT  ++ +     +  G+   G+LGHG +    +        
Sbjct: 122 LVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGAL 181

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               V  VS    H A +   GQ+FT GD S    GH +    I  P+ VE+L G+    
Sbjct: 182 DGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLT-SISCPKEVESLSGLKTIA 240

Query: 222 VTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           V  G+  T  +              G + T G     +LGHGD   R  P  +A L +  
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY- 299

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
              ++A G S  + +T +G V S G+     LG+      L P  ++  R  G HV++V+
Sbjct: 300 DFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL-PCLVED-RIAGEHVLQVA 357

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            G  HV  L     V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 358 CGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALK 401



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGT 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR +++      +V  V+ G+ H  A+ ++G +YTWG G    G LGHG +   
Sbjct: 114 REDSVHPRLVESL--AACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGH 171

Query: 365 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P+ +S     L V  V      T ++   G ++ FG   FG LG    G    +  P+
Sbjct: 172 WIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGH---GNLTSISCPK 228

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRL 288

Query: 473 EPT 475
           +PT
Sbjct: 289 KPT 291



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 19/288 (6%)

Query: 199 RDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 257
           R T +  F  P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D 
Sbjct: 58  RSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDS 117

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRA 315
             P+ +  L    +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ 
Sbjct: 118 VHPRLVESLAAC-NVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 176

Query: 316 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           I +    G+ V  VS G  H   + S G ++T+G G  G LGHG+    + P+ + SL  
Sbjct: 177 I-SGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSG 235

Query: 376 HLAVQVCARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
              + V      T  +V+            G ++ +G      LG  D+   +  L+P  
Sbjct: 236 LKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDK---ESRLKPTC 292

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           + SL  +   +++ G   TV +T  G++   G++   QLG+    G L
Sbjct: 293 VASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRL 340



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 17/221 (7%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 163
           ++ G +HT LI++   +F+ G    GVLGHG       P+  + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVACGVWHT 248

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V  +  H++  + +G++FT GD      GH D    + +P  V +L      +V 
Sbjct: 249 AAIVEVIVT--HSSSSVSAGKLFTWGDGDKHRLGHGDKESRL-KPTCVASLIDYDFYRVA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V + G++ +GQLG+ ++ D   P  +        V+Q+A G  ++ 
Sbjct: 306 CGHSLTVCLTTSGKVLSMGNSVYGQLGNPNS-DGRLPCLVEDRIAGEHVLQVACGSYHVA 364

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            +TG   V+++G G+N  LGHG+  D   P  ++  + + +
Sbjct: 365 VLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAV 405



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 340 DSSGYVYTWGKGYC---------GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           DS G VY WG+ +C           +   ++ D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V+ +G    G LG    G  +  + PR+++SL A +V  ++ G +HT  VT  G
Sbjct: 92  VTRNGDVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTG 148

Query: 451 RLFGFGD--NERAQLGHDTLRGCLEPTEI 477
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDAGHWIPKRI 177


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 146/311 (46%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R NF     V  V     H  FVL  G V+TCG N     GH  + +   RP  V AL  
Sbjct: 27  RCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 275
                V+ G   T  L  +G V+  G    GQLG   T +    P++I  L +V  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDV-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    V+S+G   +  LG G +   +  P+ I++    GI   +++AG  
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLL--GIPFGQIAAGGA 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H  AL  SG V+ WG+   G LG  DE D+ +P  L SL+S   V +   +  T  L   
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 453
           G V+ FG  G+G LG    G     + PR +  L  + V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTG---HEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR          + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQVG 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ L +   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           + +V+V+ G  H +AL     V++WG+   G LG G ++ K T P+ + SL      Q+ 
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  +G+V+G+G   FG LG  D   +D+ + P +L SLR+  +  IS G  H
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYISCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVF 289



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTLN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G  +    G   T      PR +++L  V   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N HGQLG G  L + T P+ I  L  +    QIAAG ++  A+T +G V+ +G    
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGI-PFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L  ++  Q+ C R+  +  +  TG +Y FG  G G LG
Sbjct: 278 STGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 7/265 (2%)

Query: 110 SAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVV 167
            A N + ++ G  HTL +++   V++ G +  G LG  P T +     R I   S   +V
Sbjct: 82  DAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-PGTEEYTRVPRNIKSLSDVQIV 140

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           QV+    H+  + +  +VF+ G N     G     +    P+L+++L G+P  Q+ AG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGA 200

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  LT+ G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T 
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTK 259

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVY 346
            G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + S+G +Y
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLS 371
           ++G G  G LG G   ++  P P+ 
Sbjct: 318 SFGLGGNGQLGMGSTSNRKSPFPVK 342


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 128/255 (50%), Gaps = 3/255 (1%)

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
           EA  G   +Q  +G   +  L   G VH CG N+ GQLG      R  P  I  LE + +
Sbjct: 16  EAAGGAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETL-N 74

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  ++ G  + LAV   G V+++G+GS   LG GE   EL    ++     GI +++VS 
Sbjct: 75  VDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGE-FKELNFTPMKVKALAGIKIIQVSC 133

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           G  H +AL   G V++WG    G LG G E + +  P+ + SL+     QV A    +F 
Sbjct: 134 GHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFA 193

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  +G+ +G+G    G L      V  +  +PR + +L+   V  IS G  HT V+T  G
Sbjct: 194 LSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDG 253

Query: 451 RLFGFGDNERAQLGH 465
           ++F FGDN   QLGH
Sbjct: 254 KVFTFGDNSSGQLGH 268



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 143/309 (46%), Gaps = 28/309 (9%)

Query: 108 ETSAGNQM-QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI 158
           E + G ++ Q  +G  H+LL+ S+ +V +CG + CG LG         P   Q +    +
Sbjct: 16  EAAGGAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNV 75

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
           +         +S  + H+  V   G+VF  G  S    G  +     F P  V+AL G+ 
Sbjct: 76  DL--------LSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIK 127

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAA 277
             QV+ G   +  L+  G V + G+N+HGQLG G + L + +P+ +  LE +  + Q+AA
Sbjct: 128 IIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGI-PLAQVAA 186

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
           G ++  A++ +G   SFG GSN        G+       +PR+I   +  G  VV +S G
Sbjct: 187 GGAHSFALSLSGT--SFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELG--VVYISCG 242

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            EH   L   G V+T+G    G LGHG   +K  P+ +  +   ++   C        + 
Sbjct: 243 SEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGLVSQIDCGSYHTLVYVY 302

Query: 393 DTGSVYGFG 401
            T  V  FG
Sbjct: 303 TTRQVISFG 311



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 142/287 (49%), Gaps = 13/287 (4%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A + Q ++ E H+  +L  G V  CGDNS    G R       RP L++AL+ +    ++
Sbjct: 21  AELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRK-RPGLIQALETLNVDLLS 79

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TP  +  L  +  ++Q++ G  + 
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGI-KIIQVSCGHYHS 138

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 139 LALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSL--EGIPLAQVAAGGAHSFALSL 196

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           SG  + WG    G L   G+   +    P  + +LK    V +      T VL   G V+
Sbjct: 197 SGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVF 256

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            FG    G LG    G + +   P++++ +    VSQI  G YHT+V
Sbjct: 257 TFGDNSSGQLG---HGPTAEKRGPQLVEGIDGL-VSQIDCGSYHTLV 299



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 25/283 (8%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q++ G YH+L +S +  VFS G++  G LG G E     S  R+       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGG 188

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 231
            H+  +  SG  F  G N++        N P+  ++PR + ALK +    ++ G   T  
Sbjct: 189 AHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAV 248

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT  G V T G N+ GQLGHG T ++  P+ +  ++  G V QI  G  + L       V
Sbjct: 249 LTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGID--GLVSQIDCGSYHTL-------V 299

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD------EHVVALDSSGYV 345
           Y + +      G G        R+    +   +  + +SA D      +H+ A   + +V
Sbjct: 300 YVYTTRQVISFGRGPSDTTSSTRSDALTKNSDVSCL-ISADDLVNVQVKHIFAGTYANFV 358

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 388
            T+      ++       KTLPE +S +   L  +  A +R T
Sbjct: 359 TTYQDATSTSVSR-----KTLPE-ISRINQPLIKKWIAVERST 395


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4020 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4078

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4079 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4137

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4138 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4194

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4195 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4252

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4253 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4312

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4313 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4348



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4013 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4070

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4071 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4129

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4130 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4187

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4188 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4247

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4248 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4304

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4305 GSNSEGQLGLGHTNHVREPTLVTV 4328



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3988 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4042

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4043 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4102

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4103 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4160

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4161 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4209



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3988 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4044

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4045 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4101

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4102 KLGHGNSDRQRRPRQIEALQGEE 4124



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             VV++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSADGSVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4314

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4315 GSNSEGQLGLGHTNHVREPT 4334



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLG 4219



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4026 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4084

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4085 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4143

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4144 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4200

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4258

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4259 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4318

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4319 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4019 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4076

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4077 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4135

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4136 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4193

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4194 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4253

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4254 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4310

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4311 GSNSEGQLGLGHTNHVREPTLVTV 4334



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3994 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4048

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4049 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4108

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4109 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4166

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4167 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4215



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3994 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4050

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4051 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4107

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4108 KLGHGNSDRQRRPRQIEALQGEE 4130



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4357



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 147/316 (46%), Gaps = 13/316 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V +V+    H   +L +G V++CG N     G    +R + +   V AL     + V  G
Sbjct: 87  VREVACGHKHTLVLLANGSVYSCGANDF---GQLGQDRSMRKLEQVAALSAHEIRAVACG 143

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
              +  L+  G V + G N +GQLG G +   R  PK I  L  +  +VQIA G  + LA
Sbjct: 144 EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATL-HIVQIACGAVHCLA 202

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +  NG ++S+G  ++  LG G     +E  PR +      G+ +  V+ G  H V L  S
Sbjct: 203 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHL--VGVPLALVACGAMHSVGLTPS 260

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V+ WG+  CG LG  D+ D+  P  L  L+S     VC  +  T  L   G V+ FG 
Sbjct: 261 GTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGA 320

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERA 461
             +G LG    GV      PR +  L    +SQ+S G  HTV    + GRL+ FG     
Sbjct: 321 GTYGQLG---HGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSG 377

Query: 462 QLGHDTLRGCLEPTEI 477
           QLG+ TL     P  +
Sbjct: 378 QLGNGTLESSALPVTV 393



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 129/273 (47%), Gaps = 6/273 (2%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 156
           +S+     +   SA     +  G  H+L +S++  VFS G +  G LG G E    +   
Sbjct: 121 RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPK 180

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK 215
            I   +  H+VQ++    H   +  +G++F+ G N+S   G  RD+      PR V  L 
Sbjct: 181 VIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLV 240

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           GVP   V  G   +  LT  G V   G N+ GQLG  D  DR  P  + PL     +  +
Sbjct: 241 GVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHV 299

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             G ++  A+T +G V++FG+G+   LGHG + +E  PR +      G  + ++S G  H
Sbjct: 300 CCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCH 357

Query: 336 VVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            VA    SG +Y +G G  G LG+G      LP
Sbjct: 358 TVAYAPQSGRLYIFGLGMSGQLGNGTLESSALP 390


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 146/311 (46%), Gaps = 12/311 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R NF     V  V     H  FVL  G V+TCG N     GH  + +   RP  V AL  
Sbjct: 27  RCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 275
                V+ G   T  L  +G V+  G    GQLG   T +    P++I  L +V  +VQ+
Sbjct: 84  QNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDV-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    V+S+G   +  LG G +   +  P+ I++    GI   +++AG  
Sbjct: 143 ACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLL--GIPFGQIAAGGA 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H  AL  SG V+ WG+   G LG  DE D+ +P  L SL+S   V +   +  T  L   
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 453
           G V+ FG  G+G LG    G     + PR +  L  + V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLGHNSTG---HEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 454 GFGDNERAQLG 464
            FG     QLG
Sbjct: 318 SFGLGGNGQLG 328



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR          + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQVG 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ L +   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           + +V+V+ G  H +AL     V++WG+   G LG G ++ K T P+ + SL      Q+ 
Sbjct: 137 VQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  +G+V+G+G   FG LG  D   +D+ + P +L SLR+  +  IS G  H
Sbjct: 197 AGGAHSFALTLSGAVFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYISCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVF 289



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTLN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G  +    G   T      PR +++L  V   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N HGQLG G  L + T P+ I  L  +    QIAAG ++  A+T +G V+ +G    
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGI-PFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L  ++  Q+ C R+  +  +  TG +Y FG  G G LG
Sbjct: 278 STGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 7/265 (2%)

Query: 110 SAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVV 167
            A N + ++ G  HTL +++   V++ G +  G LG  P T +     R I   S   +V
Sbjct: 82  DAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-PGTEEYTRVPRNIKSLSDVQIV 140

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           QV+    H+  + +  +VF+ G N     G     +    P+L+++L G+P  Q+ AG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGA 200

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  LT+ G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T 
Sbjct: 201 HSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTK 259

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVY 346
            G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + S+G +Y
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTGHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLS 371
           ++G G  G LG G   ++  P P+ 
Sbjct: 318 SFGLGGNGQLGMGSTSNRKSPFPVK 342


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIIQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIIQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIIQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3672 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3730

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3731 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3789

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 3790 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 3846

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 3847 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 3904

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 3905 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 3964

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 3965 GL---GHTNHVREPTVVTGLQGKNVRQISAGRCHSAAWT 4000



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 149/322 (46%), Gaps = 13/322 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3665 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 3722

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 3723 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 3781

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 3782 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 3839

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 3840 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 3899

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 3900 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 3956

Query: 456  GDNERAQLGHDTLRGCLEPTEI 477
            G N   QLG        EPT +
Sbjct: 3957 GSNSEGQLGLGHTNHVREPTVV 3978



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3640 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3694

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3695 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3754

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 3755 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 3812

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 3813 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 3861



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 6/116 (5%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGH 237
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG    L +T     R H
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDREH 742



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3640 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3696

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3697 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3753

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 3754 KLGHGNSDRQRRPRQIEALQGEE 3776


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIIQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4035 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4093

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4094 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAV 4152

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4153 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4209

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4210 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4267

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4268 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4327

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4328 GL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4363



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AV+ +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVAIQQISA 725



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4028 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4085

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    V+Q++
Sbjct: 4086 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVIQMS 4144

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4145 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4202

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4203 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4262

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4263 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4319

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT I +
Sbjct: 4320 GSNSEGQLGLGHTNHVREPTLITV 4343



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4003 VYLWGAGRHGQLAEAGRNVMIP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4057

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4058 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4117

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    +Q+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4118 LGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4175

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4176 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4224



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 94/233 (40%), Gaps = 59/233 (25%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFR------------------------------ 320
           VY +GS S+  L  G Q   LQP+   +F                               
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYG 433

Query: 321 --------------------RKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGALGHG 359
                                + I  V  S G D H +A  + G V++WG G  G LGHG
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG 493

Query: 360 DEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           +   +  P+ +   L+  + V V A  R +  + + G +Y +G   FG LG    G S+ 
Sbjct: 494 NSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLG---HGDSNS 550

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLGH-DTLR 469
              P ++  +   +V ++S G  HT+ ++  GR ++ FG  +  +LGH DT R
Sbjct: 551 RNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4003 VYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4059

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4060 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4116

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4117 KLGHGNSDRQRRPRQIEALQGEE 4139


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 147/316 (46%), Gaps = 13/316 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V +V+    H   +L +G V++CG N     G    +R + +   V AL     + V  G
Sbjct: 93  VREVACGHKHTLVLLANGSVYSCGAND---FGQLGQDRSMRKLEQVAALSAHEIRAVACG 149

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
              +  L+  G V + G N +GQLG G +   R  PK I  L  +  +VQIA G  + LA
Sbjct: 150 EAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATL-HIVQIACGAVHCLA 208

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +  NG ++S+G  ++  LG G     +E  PR +      G+ +  V+ G  H V L  S
Sbjct: 209 LANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHL--VGVPLALVACGAMHSVGLTPS 266

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V+ WG+  CG LG  D+ D+  P  L  L+S     VC  +  T  L   G V+ FG 
Sbjct: 267 GTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGA 326

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERA 461
             +G LG    GV      PR +  L    +SQ+S G  HTV    + GRL+ FG     
Sbjct: 327 GTYGQLG---HGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSG 383

Query: 462 QLGHDTLRGCLEPTEI 477
           QLG+ TL     P  +
Sbjct: 384 QLGNGTLESSALPVTV 399



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 134/274 (48%), Gaps = 21/274 (7%)

Query: 200 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 259
           DT  P+ +P  V        ++V  G   T  L   G V++CG+N  GQLG         
Sbjct: 74  DTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSCGANDFGQLGQD------- 126

Query: 260 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQP 313
            +S+  LE+V +     +  +A G ++ LA++  G V+S+G   N  LG G E+   L+P
Sbjct: 127 -RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRP 185

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI--DKTLPEPLS 371
           + I+  +   +H+V+++ G  H +AL ++G +++WG    G LG G +   ++ LP  +S
Sbjct: 186 KVIK--KLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVS 243

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
            L       V      +  L  +G+V+ +G    G LG  D+   D+ L P +L  LR+ 
Sbjct: 244 HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQ--RDR-LHPTVLKPLRSQ 300

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            +  +  G  HT  +T  G +F FG     QLGH
Sbjct: 301 RIKHVCCGENHTAALTADGGVFTFGAGTYGQLGH 334



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 143/300 (47%), Gaps = 14/300 (4%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G  HTL L++N SV+SCG++  G LG      +     ++   SA  +  V+  E 
Sbjct: 95  EVACGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRK---LEQVAALSAHEIRAVACGEA 151

Query: 175 HAAFVLQSGQVFT--CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           H+  +  +GQVF+  C  N    CG  + +R   RP++++ L  +   Q+  G      L
Sbjct: 152 HSLALSDAGQVFSWGCNRNGQLGCGTEEESR--LRPKVIKKLATLHIVQIACGAVHCLAL 209

Query: 233 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
              G + + G N  GQLG G   T +   P+ ++ L  V  +  +A G  + + +T +G 
Sbjct: 210 ANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGV-PLALVACGAMHSVGLTPSGT 268

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+ +G  S   LG  +Q D L P  ++  R + I    V  G+ H  AL + G V+T+G 
Sbjct: 269 VFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIK--HVCCGENHTAALTADGGVFTFGA 326

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           G  G LGHG ++++ +P  +  L      Q+ C R         +G +Y FG    G LG
Sbjct: 327 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLG 386



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 129/273 (47%), Gaps = 6/273 (2%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT 156
           +S+     +   SA     +  G  H+L +S++  VFS G +  G LG G E    +   
Sbjct: 127 RSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPK 186

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK 215
            I   +  H+VQ++    H   +  +G++F+ G N+S   G  RD+      PR V  L 
Sbjct: 187 VIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLV 246

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           GVP   V  G   +  LT  G V   G N+ GQLG  D  DR  P  + PL     +  +
Sbjct: 247 GVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRS-QRIKHV 305

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             G ++  A+T +G V++FG+G+   LGHG + +E  PR +      G  + ++S G  H
Sbjct: 306 CCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELM--GTAISQLSCGRCH 363

Query: 336 VVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            VA    SG +Y +G G  G LG+G      LP
Sbjct: 364 TVAYAPQSGRLYIFGLGMSGQLGNGTLESSALP 396



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 14/128 (10%)

Query: 345 VYTWGKGYCGALGH---GDEIDK----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           +Y+WG G  G LG     D +D     + PE +    +    +V    + T VL+  GSV
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           Y  G   FG LG       D+ +R    + +L AH +  ++ G  H++ ++D G++F +G
Sbjct: 113 YSCGANDFGQLG------QDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWG 166

Query: 457 DNERAQLG 464
            N   QLG
Sbjct: 167 CNRNGQLG 174


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 153/320 (47%), Gaps = 21/320 (6%)

Query: 165 HVVQVSA--SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
            V++V+A     H   +   G+V++ G+      GH DTN            KG     +
Sbjct: 190 EVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNV---------CYKGQKVLVI 240

Query: 223 TAGLNFTG----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQI 275
               +  G     LT  G V++ G+   G+LGHGDT  R  P  +  L  +++G  VV I
Sbjct: 241 VYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHI 300

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             G +Y  A+T +G ++++G G+   LGHG   D+L P  + + + + +  +   +GD  
Sbjct: 301 VCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQ 360

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+   G V++WG G  G LG G       P+ +  L+    V+VC   + +  L  TG
Sbjct: 361 TLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTG 420

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            ++ +G      LG    G  + +  P+ L+ LR   V  ++ G  H +V+T+ G ++G+
Sbjct: 421 HIWTWGKGDSQRLG---HGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGW 477

Query: 456 GDNERAQLGHDTLRGCLEPT 475
           G N++ QLG  +     +PT
Sbjct: 478 GRNDQGQLGDSSFSTKSDPT 497



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 152/340 (44%), Gaps = 25/340 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G+++  L S   V+S G+   G LGHG +T  C    ++       V        H   +
Sbjct: 200 GKHYMALTSEGEVYSWGNGDGGRLGHG-DTNVCYKGQKV----LVIVYPYHPEGKHYMAL 254

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ----VTAGLNFTGFLTIR 235
              G+V++ G+      GH DTN     P LV  L G    +    +  G  ++  +T  
Sbjct: 255 TSEGEVYSWGNGDGGRLGHGDTNSR-EEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITAD 313

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI--AAGPSYMLAVTGNGVVYS 293
           G + T G   +G+LGHG + D+ TP  +  L+    V+ I   +G +  LAVT +G V+S
Sbjct: 314 GELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGR-RVIDICCGSGDAQTLAVTDDGTVWS 372

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G G    LG G       P+ I   R +G  +VRV  G +  +AL  +G+++TWGKG  
Sbjct: 373 WGDGDYGKLGRGGSDGCKTPKIID--RLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDS 430

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---F 410
             LGHG E     P+ L  L+    V V        V+ + G VYG+G    G LG   F
Sbjct: 431 QRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSF 490

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
             +  SD  L P     L    +S I+ G   +   T  G
Sbjct: 491 STK--SDPTLMP-----LDGKSISGIACGPAQSFCWTSTG 523



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 89/225 (39%), Gaps = 44/225 (19%)

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
           L E+G V+Q+A     ++A+T  G VY        C    E      P+ +++   K + 
Sbjct: 144 LGELG-VLQLACAERCLIALTKTGRVY-------MCFYSSESQG---PQLMESLADKEVL 192

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            V      +H +AL S G VY+WG G  G LGHGD                    VC + 
Sbjct: 193 KVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGD------------------TNVCYKG 234

Query: 386 RKTFVLV--------------DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR-A 430
           +K  V+V                G VY +G    G LG  D    ++    R L   +  
Sbjct: 235 QKVLVIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLG 294

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
            HV  I  G  ++  +T  G LF +G     +LGH +    L PT
Sbjct: 295 RHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPT 339


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V++WG+   G LG G + +K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 156/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+S+G      LG G + + +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSL--TGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFS 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCNKQASPQLIKSLTGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 135/275 (49%), Gaps = 11/275 (4%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEA 213
            R I   S   +VQV+    H+  + ++ +VF+ G N     G   D N+    P+L+++
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQA-SPQLIKS 186

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIV 245

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 334 EHVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           +H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 121/252 (48%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VFS G +  G LG G +  +  S   I   +    +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4315

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIIQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +++V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  ++Q+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   ++QV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIIQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4098

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4214

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4272

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4333 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4368



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4033 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4090

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4091 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4149

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4150 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4207

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4208 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4267

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4268 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4324

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4325 GSNSEGQLGLGHTNHVREPTLVTV 4348



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4008 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4062

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4063 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4122

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4123 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4180

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4181 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4229



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4008 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4064

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4065 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4121

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4122 KLGHGNSDRQRRPRQIEALQGEE 4144



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4028 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4086

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4087 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4145

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4146 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSSDG 4202

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4203 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4260

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4261 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4320

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4321 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4356



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           + V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 RKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4021 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4078

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4079 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4137

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4138 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4195

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ S G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4196 LAVSSDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4255

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4256 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4312

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4313 GSNSEGQLGLGHTNHVREPTLVTV 4336



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3996 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4050

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4051 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4110

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4111 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4168

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4169 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLG 4217



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3996 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4052

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4053 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4109

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4110 KLGHGNSDRQRRPRQIEALQGEE 4132



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G     +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4040 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4098

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4099 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4157

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4158 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4214

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4215 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4272

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4273 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4332

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4333 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4368



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4033 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4090

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4091 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4149

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4150 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4207

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4208 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4267

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4268 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4324

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4325 GSNSEGQLGLGHTNHVREPTLVTV 4348



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4008 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4062

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4063 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4122

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4123 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4180

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4181 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4229



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4008 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4064

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4065 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4121

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4122 KLGHGNSDRQRRPRQIEALQGEE 4144



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4029 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4087

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4088 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4146

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4147 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4203

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4261

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4262 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4321

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4322 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4022 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4079

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4138

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4139 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4196

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4197 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4256

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4257 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4313

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4314 GSNSEGQLGLGHTNHVREPTLVTV 4337



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4051

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4052 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4111

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4112 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4169

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4170 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3997 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4053

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4054 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEE 4133



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAASNIDFVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 340
             +T  G +++FG GS   LGHG       PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 341 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 450
             +G V+  G   +G LG P+   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNPN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDVEDRKVPTTV 396



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 134/286 (46%), Gaps = 24/286 (8%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ A + +  +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P
Sbjct: 122 LVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGP 180

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                +  VS    H A +   GQ+FT GD S    GH +  + I  PR VE+L G+   
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNV-KSISCPREVESLSGLKTI 239

Query: 221 QVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V  G+  T  +              G + T G     +LGHGD   R  P  +A L + 
Sbjct: 240 AVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY 299

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVR 328
               ++A G S  + +T +G V++ G   N   G  G  + + +P  ++  +    HV++
Sbjct: 300 -DFYRVACGHSLTVGLTTSGKVWTMG---NSVYGQLGNPNSDGRPCLVED-KIASEHVLQ 354

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           ++ G  HV  L S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 355 IACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALR 400



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 118/246 (47%), Gaps = 31/246 (12%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR +++     I    V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESLAASNIDF--VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 365 TLPE----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
            +P     PL  L+  +A   C     T ++   G ++ FG   FG LG    G    + 
Sbjct: 172 WIPRRISGPLEGLQ--IAYVSCG-TWHTALITSMGQLFTFGDGSFGVLGH---GNVKSIS 225

Query: 421 RPRILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLR 469
            PR ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH    
Sbjct: 226 CPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKE 285

Query: 470 GCLEPT 475
             L+PT
Sbjct: 286 ARLKPT 291



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 39/348 (11%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 173
           R+ +L+  N  VF+ G    G LGHG       P   + ++ + I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDF--------VACGE 138

Query: 174 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 285
            +T  G + T G  + G LGHG+      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 286 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNPNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            +G    G LG  D  V D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--VEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 20/285 (7%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESL- 126

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 127 AASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 375
           +  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGV 245

Query: 376 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 477
           +++ G   TV +T  G+++  G++   QLG+    G  CL   +I
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVEDKI 347



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 18/221 (8%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           ++ G +HT LI++   +F+ G    GVLGHG    + +S  R +   S    + V+    
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVW 246

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A +++           +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 247 HTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAV 404



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 340 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTTG 148

Query: 451 RLFGFGD--NERAQLGHDTLRGCLEPTEI 477
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 2677 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2735

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2736 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2794

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 2795 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 2851

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 2852 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 2909

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 2910 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 2969

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 2970 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 3005



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 2670 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 2727

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 2728 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 2786

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 2787 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 2844

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 2845 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 2904

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 2905 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 2961

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 2962 GSNSEGQLGLGHTNHVREPTLVTV 2985



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 2645 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 2699

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 2700 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 2759

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 2760 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 2817

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 2818 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 2866



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 2645 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 2701

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 2702 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 2758

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 2759 KLGHGNSDRQRRPRQIEALQGEE 2781


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 149/305 (48%), Gaps = 21/305 (6%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           HA+ V + G+VFT G+ S    GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 289 HASLVTRQGEVFTWGEESGGRLGH-GVGKNVVQPRLVEALISTTIDFVACGEFHSCAVTM 347

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G ++T G   H  G LGHG  +    PK IA PLE +  +  +A GP +   +T  G +
Sbjct: 348 AGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGL-QIAFVACGPWHTALITSTGQL 406

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 340
           ++FG G+   LGHG++ +   PR +++    G+  + V+ G  H  A+            
Sbjct: 407 FTFGDGTFGVLGHGDRQNVSYPREVESLL--GLRTIAVACGVWHTAAVVEVIATHSGTSI 464

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           SSG ++TWG G    LGHGD+  +  P  +S+L  +   ++      T  L  +G V+  
Sbjct: 465 SSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTM 524

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   +G LG     +SD  +   + D +    + +I+ G YH  V+T +  ++ +G    
Sbjct: 525 GSTVYGQLG---SSLSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVYTWGKGAN 581

Query: 461 AQLGH 465
            +LGH
Sbjct: 582 GRLGH 586



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 21/282 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G +H+  ++ +  +++ G  +   G+LGHG   +  +   RI  P     +  V+  
Sbjct: 335 VACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIP-KRIAGPLEGLQIAFVACG 393

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT--- 229
             H A +  +GQ+FT GD +    GH D    +  PR VE+L G+    V  G+  T   
Sbjct: 394 PWHTALITSTGQLFTFGDGTFGVLGHGDRQN-VSYPREVESLLGLRTIAVACGVWHTAAV 452

Query: 230 --------GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                   G     G + T G     +LGHGD   R  P  ++ L +  +  +IA G S 
Sbjct: 453 VEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDY-NFHKIACGHSL 511

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +T +G V++ GS     LG      ++    +   +  G  +  ++ G  HV  L S
Sbjct: 512 TVGLTTSGRVFTMGSTVYGQLGSSLSDGKVP--CLVGDKIAGESIEEIACGAYHVAVLTS 569

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 570 KNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIAC 611



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 182/451 (40%), Gaps = 70/451 (15%)

Query: 28  SAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN 87
           SA D+  + ++S     SHG  P  + +L D+         ++  G  +NV        N
Sbjct: 207 SASDVFRVSVSSAPSTSSHGSAPDDYDALWDVYIWGEVTCENVKVGADKNV--------N 258

Query: 88  GNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG-RYHTLLISNSSVFSCGSSLCGVLGHG 146
               R    L     S+ +++        I  G R+ +L+     VF+ G    G LGHG
Sbjct: 259 YFSPRADVLLPRPLESNVVLDV-----HHIACGVRHASLVTRQGEVFTWGEESGGRLGHG 313

Query: 147 -------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCG 197
                  P   + +  T I+F        V+  E H+  V  +G+++T GD  +++   G
Sbjct: 314 VGKNVVQPRLVEALISTTIDF--------VACGEFHSCAVTMAGELYTWGDGMHNAGLLG 365

Query: 198 HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 257
           H          R+   L+G+    V  G   T  +T  G + T G  T G LGHGD  + 
Sbjct: 366 HGSNVSHWIPKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNV 425

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVT-----------GNGVVYSFGSGSNFCLGHGE 306
             P+ +  L  + ++  +A G  +  AV             +G ++++G G    LGHG+
Sbjct: 426 SYPREVESLLGLRTIA-VACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGD 484

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH-------- 358
           +   L+P  +        H  +++ G    V L +SG V+T G    G LG         
Sbjct: 485 KEARLKPTCVSALIDYNFH--KIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLSDGKVP 542

Query: 359 ---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
              GD+I     E ++    H+A           VL     VY +G    G LG  D  +
Sbjct: 543 CLVGDKIAGESIEEIACGAYHVA-----------VLTSKNEVYTWGKGANGRLGHGD--I 589

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            D+   P ++++L+  HV  I+ G  ++  +
Sbjct: 590 EDRKT-PALVEALKDRHVKYIACGSNYSAAI 619



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 21/296 (7%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR +E+   +    +  G+     +T +G V T G  + G+LGHG   +   P+ + 
Sbjct: 266 VLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVE 325

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L    ++  +A G  +  AVT  G +Y++G G +    LGHG       P+ I     +
Sbjct: 326 ALIST-TIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRI-AGPLE 383

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ +  V+ G  H   + S+G ++T+G G  G LGHGD  + + P  + SL     + V 
Sbjct: 384 GLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVA 443

Query: 383 ARKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
                T  +V+           +G ++ +G      LG  D+   +  L+P  + +L  +
Sbjct: 444 CGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDK---EARLKPTCVSALIDY 500

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 484
           +  +I+ G   TV +T  GR+F  G     QLG     G   CL   +I  + +EE
Sbjct: 501 NFHKIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLSDGKVPCLVGDKIAGESIEE 556


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 1611 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 1669

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1670 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 1728

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 1729 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 1785

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 1786 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 1843

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 1844 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 1903

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 1904 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 1939



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 1604 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 1661

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 1662 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 1720

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 1721 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 1778

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 1779 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 1838

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 1839 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 1895

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 1896 GSNSEGQLGLGHTNHVREPT 1915



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 1579 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 1633

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 1634 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 1693

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 1694 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 1751

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 1752 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 1800



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 1579 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 1635

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 1636 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1692

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 1693 KLGHGNSDRQRRPRQIEALQGEE 1715


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 160/341 (46%), Gaps = 17/341 (4%)

Query: 131 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           +++  G +  G LG G  E  Q +  ++I F   + V Q++    H  F+  +GQV+ CG
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
           +N     GH     P  RP  +  L+     Q+  G   +  LT  G + + G N  GQ+
Sbjct: 62  NNDHHQLGHE---LPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           GH    D      I       +VVQIA G ++ LA+T  G +YS+  GSN     G Q  
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSW--GSNIYGQLGVQSP 176

Query: 310 ELQPRAIQTFRRK---GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           +  P +    R     GI +  ++ G  H   +  S  V+ WGK  CG LG  DE ++  
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAY 236

Query: 367 PEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
           P  L S+++ L V+   C  +   F L + G V+  G   +G LG    GVS+  + PR+
Sbjct: 237 PSQLKSMRT-LGVRFVTCGDEYSVF-LTNEGGVFTCGAGNYGQLG---HGVSNNEMIPRM 291

Query: 425 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 464
           +  L    ++Q++ G  HT+ +V   GR++ FG     QLG
Sbjct: 292 VIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLG 332



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 142/302 (47%), Gaps = 17/302 (5%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  HTL L +N  V++CG++    LGH   T + +    +    A  V+Q++    
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSR 96

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  + + GQ+ + GDN     GH   N  I  P+++  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTGNGV 290
            G +++ GSN +GQLG     D   P S APL         +  IA G ++   ++ +  
Sbjct: 157 CGELYSWGSNIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214

Query: 291 VYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           V  FG G N C  LG  ++ +   P  +++ R  G+    V+ GDE+ V L + G V+T 
Sbjct: 215 V--FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRF--VTCGDEYSVFLTNEGGVFTC 270

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGS 407
           G G  G LGHG   ++ +P  +  L      QV    R T  LV + G VY FG    G 
Sbjct: 271 GAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQ 330

Query: 408 LG 409
           LG
Sbjct: 331 LG 332



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 129/271 (47%), Gaps = 18/271 (6%)

Query: 202 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           N  I  P  +E     P +Q+  G   T FLT  G V+ CG+N H QLGH     RP P 
Sbjct: 21  NEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP- 79

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 320
              P  +   V+QIA G  + +A+T  G + S+G      +GH   +D ++ P+ ++   
Sbjct: 80  --IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLV 137

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE---PL---SSLK 374
            +   VV+++ G+ H +AL S G +Y+WG    G LG   +  K LP    PL   + L 
Sbjct: 138 SRT--VVQIACGNNHSLALTSCGELYSWGSNIYGQLGV--QSPKDLPHSNAPLRLTTILG 193

Query: 375 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
             LA   C     +F++  + +V+G+G    G LG  D         P  L S+R   V 
Sbjct: 194 IPLATIACGGNH-SFLISKSSAVFGWGKNTCGQLGLNDE---QNRAYPSQLKSMRTLGVR 249

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            ++ G  ++V +T+ G +F  G     QLGH
Sbjct: 250 FVTCGDEYSVFLTNEGGVFTCGAGNYGQLGH 280



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 15/271 (5%)

Query: 106 IVETSAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           I E  A   +QI  G  H++ ++    + S G + CG +GH  +         + F  + 
Sbjct: 80  IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSR 139

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD------TNRPIFRPRLVEALKGVP 218
            VVQ++   NH+  +   G++++ G N     G +       +N P+   RL   L G+P
Sbjct: 140 TVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPL---RLTTIL-GIP 195

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
              +  G N +  ++    V   G NT GQLG  D  +R  P  +  +  +G V  +  G
Sbjct: 196 LATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCG 254

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             Y + +T  G V++ G+G+   LGHG  ++E+ PR +      G  + +V+ G+ H +A
Sbjct: 255 DEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPRMV--IELMGSTITQVACGNRHTLA 312

Query: 339 L-DSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           L  S G VY++G G  G LG  + I +TLP+
Sbjct: 313 LVPSGGRVYSFGLGASGQLGTRNTISQTLPK 343



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 14/246 (5%)

Query: 238 VHTCGSNTHGQLGHG----DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           ++  G  +HGQLG G    + +  P+     P      V QIA G  + L +T NG VY+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKP---DSPVQQIACGHRHTLFLTANGQVYA 59

Query: 294 FGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            G+  +  LGH     EL   R +     +   V++++ G  H +AL   G + +WG   
Sbjct: 60  CGNNDHHQLGH-----ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114

Query: 353 CGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
           CG +GH  + D   LP+ L  L S   VQ+      +  L   G +Y +G   +G LG  
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQ 174

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
                     P  L ++    ++ I+ G  H+ +++    +FG+G N   QLG +  +  
Sbjct: 175 SPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNR 234

Query: 472 LEPTEI 477
             P+++
Sbjct: 235 AYPSQL 240



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 4/149 (2%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H+ LIS SS VF  G + CG LG   E  +    +++       V  V+  + +
Sbjct: 199 IACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYP-SQLKSMRTLGVRFVTCGDEY 257

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 234
           + F+   G VFTCG  +    GH  +N  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGNYGQLGHGVSNNEMI-PRMVIELMGSTITQVACGNRHTLALVPS 316

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
            G V++ G    GQLG  +T+ +  PK +
Sbjct: 317 GGRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4323

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4359



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 16/337 (4%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 172
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 231
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 525

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 290
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G C   G   E     P+ +  L +   V +         L     VY +G    G  G 
Sbjct: 641 GACLGCG-SSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCG- 698

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
                +  + +P+ +  L    + QIS G  H++  T
Sbjct: 699 -QGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 734



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 139/283 (49%), Gaps = 10/283 (3%)

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           A  V ++ +V+  G NSS       T   I +P++  AL     + + AG   T  ++  
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVE-GTQEKILQPKM--ALSFSDAQTIEAGQYCTFVISTD 421

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           G V  CG  ++G+LG GD+ ++ T K +   P   +  V        + LA T  G V+S
Sbjct: 422 GSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFS 481

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G G    LGHG    +  P+ IQ    +G  VV VSAG  H  A+   G +YTWG+G  
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQG-PLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDF 540

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LGHGD   + +P  +  + S++    C       +  D  +V+ FG    G LG  D 
Sbjct: 541 GRLGHGDSNSRNIPTLVKDI-SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
             +++V +P+++++L+   + ++  G   ++ +T  G+++ +G
Sbjct: 599 --TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 140/303 (46%), Gaps = 26/303 (8%)

Query: 174 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 226
            +  FV+ + G V  CG  S    G  D+N      +  F P    ++K V   + + G 
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSIKKVSSSKGSDG- 468

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AVT
Sbjct: 469 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 345
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 583

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---W 402
           +++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
           +G GS            LRP++++ L A  +  IS G    + +     ++ +G+N   Q
Sbjct: 644 LGCGS-------SEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQ 696

Query: 463 LGH 465
            G 
Sbjct: 697 CGQ 699



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4315

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4316 GSNSEGQLGLGHTNHVREPTLVTV 4339



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4034 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4092

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4152 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4208

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4266

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4326

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4327 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4362



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4027 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4084

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4085 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4143

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4144 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4201

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4202 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4261

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4262 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAW 4318

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4319 GSNSEGQLGLGHTNHVREPT 4338



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4002 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4056

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4057 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4116

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4117 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4174

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4175 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4223



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4002 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4058

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4059 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4115

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4116 KLGHGNSDRQRRPRQIEALQGEE 4138


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 21/347 (6%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 241

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 242 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 300

Query: 251 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 301 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDT 359

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 357
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 360 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 417

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           H D+  K +P  +  L      QV   K +T VL  TG V+  G    G LG P   +S+
Sbjct: 418 HADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP---LSE 474

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                 I   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 475 DTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLG 521



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 18/294 (6%)

Query: 185 VFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
           +F  G+       H D ++  +  PRL+     +  + V  G      +T +G V + G 
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 241

Query: 244 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
           +  G+LGH  ++    PK I  L     V  IA G  +  AV+ +G +Y +G G++ CLG
Sbjct: 242 DNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAVSISGELYEWGEGTH-CLG 299

Query: 304 -HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
             G+Q+   Q    + F    GI +++++ G  H   + S+G ++T+G G  G LGHGD 
Sbjct: 300 LWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDT 359

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFP 411
           +    P+ + SLK   A  +      T  +V+          +G ++ +G    G LG  
Sbjct: 360 LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHA 419

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           D+ +    L P  ++ L     +Q+S     T+V+T  G +F  G  E  +LG+
Sbjct: 420 DKKMK---LVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGN 470



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 18/283 (6%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           I+E+ A  +++ I  G  HT  +S S     +  G+   G+ G   + +Q          
Sbjct: 260 IIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPL 319

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               +++++    H A +  +GQ+FT GD +    GH DT   + RP+ VE+LKGV  K 
Sbjct: 320 DGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKA 378

Query: 222 VTAGLNFTGFLTIR----------GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
           +  G   T  +  R          G + T G    G+LGH D   +  P  + PL +   
Sbjct: 379 IACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-D 437

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
             Q++   +  + +T  GVV++ GS  +  LG+    D      +     K   V  +S+
Sbjct: 438 FAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSED--TSICLIEGPLKTEFVREISS 495

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           G  H+  L  +G V+TWGKG  G LG GD +D++ P  + +L+
Sbjct: 496 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALE 538



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 143/351 (40%), Gaps = 36/351 (10%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHVVQ 168
           +  G  H  +++    VFS G    G LGH        P+  + ++ TR+          
Sbjct: 220 VACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVK--------A 271

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           ++    H   V  SG+++  G+ +  C G    +      F  +L   L G+   ++  G
Sbjct: 272 IAFGAKHTCAVSISGELYEWGEGT-HCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACG 330

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              T  ++  G + T G  T G LGHGDTL    PK +  L+ V +   IA GP +  A+
Sbjct: 331 HWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKA-IACGPWHTAAI 389

Query: 286 ----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
                       +G ++++G      LGH ++  +L P  ++          +VS     
Sbjct: 390 VERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPL--NDFDFAQVSCAKAQ 447

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            + L  +G V+T G    G LG+    D ++      LK+    ++ +      VL   G
Sbjct: 448 TIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNG 507

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            V+ +G    G LG  D    D+   P ++++L    V  I+ G   T+ +
Sbjct: 508 KVFTWGKGTEGQLGLGD--YVDRSY-PTLVEALEDKQVHSIACGFNFTMAI 555



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  +A G  +   VT  G V+S+G  +   LGH        P+ I++       V  ++ 
Sbjct: 217 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESL--ASTRVKAIAF 274

Query: 332 GDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKT--LPEPL-SSLKSHLAVQVCARKRK 387
           G +H  A+  SG +Y WG+G +C  L  GD+  ++   P  L   L     +++      
Sbjct: 275 GAKHTCAVSISGELYEWGEGTHCLGLW-GDQYQRSQWFPHKLFGPLDGISILKIACGHWH 333

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T ++   G ++ +G   FG LG  D   +  V RP+ ++SL+      I+ G +HT  + 
Sbjct: 334 TAIISSAGQIFTYGDGTFGVLGHGD---TLTVARPKQVESLKGVRAKAIACGPWHTAAIV 390

Query: 448 DR----------GRLFGFGDNERAQLGHDTLRGCLEPT 475
           +R          G+LF +GD +R +LGH   +  L PT
Sbjct: 391 ERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPT 428



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 291 VYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           ++ +G      L HG+  + +   PR + T     I V  V+ G++H   +   G V++W
Sbjct: 182 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHI--IDVQSVACGEKHAAIVTKQGEVFSW 239

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G    G LGH   +  + P+ + SL S     +    + T  +  +G +Y +G  G   L
Sbjct: 240 GVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG-EGTHCL 298

Query: 409 G-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-D 466
           G + D+    +    ++   L    + +I+ G +HT +++  G++F +GD     LGH D
Sbjct: 299 GLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGD 358

Query: 467 TL 468
           TL
Sbjct: 359 TL 360


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K T P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLV--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQTSPQLIKSLVGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 VGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3960 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4018

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4019 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQMSCGFKHSAV 4077

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4078 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4134

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4135 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4192

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   +      T  L  TG VY +G    G L
Sbjct: 4193 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQL 4252

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4253 GL---GHTNHVREPTLITILQGKNIRQISAGRCHSAAWT 4288



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 148/316 (46%), Gaps = 27/316 (8%)

Query: 161 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEA 213
           PS +    + A + +  FV+ + G V  CG  S    G  D+N      +  F P    +
Sbjct: 400 PSFSDAQTIEAGQ-YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RS 456

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           +K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV
Sbjct: 457 IKKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G 
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGS 570

Query: 334 EHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 393 DTGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++  
Sbjct: 631 STGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHD 683

Query: 450 GRLFGFGDNERAQLGH 465
             ++ +G+N   Q G 
Sbjct: 684 NEVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3953 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4010

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    V+Q++
Sbjct: 4011 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVIQMS 4069

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4070 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4127

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4128 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4187

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ +   G ++ +
Sbjct: 4188 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAW 4244

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT I I
Sbjct: 4245 GSNSEGQLGLGHTNHVREPTLITI 4268



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVAIQQISA 725



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3928 VYLWGAGRHGQLAEAGRNVMIP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3982

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3983 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4042

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    +Q+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4043 LGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4100

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4101 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4149



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3928 VYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3984

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3985 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4041

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4042 KLGHGNSDRQRRPRQIEALQGEE 4064


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 1642 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 1700

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1701 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 1759

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 1760 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 1816

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 1817 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 1874

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 1875 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 1934

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 1935 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 1970



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 147/323 (45%), Gaps = 11/323 (3%)

Query: 161  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
            PS +   QV   +N    +  +G V  CG+ S    G  +++  +    ++ AL+G    
Sbjct: 1635 PSFSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVVT 1693

Query: 221  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++ 
Sbjct: 1694 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMSC 1752

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
            G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H +
Sbjct: 1753 GFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHTL 1810

Query: 338  ALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G 
Sbjct: 1811 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGH 1870

Query: 397  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +G
Sbjct: 1871 VYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 1927

Query: 457  DNERAQLGHDTLRGCLEPTEIFI 479
             N   QLG        EPT + +
Sbjct: 1928 SNSEGQLGLGHTNHVREPTLVTV 1950



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 1610 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 1664

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 1665 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 1724

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 1725 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 1782

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 1783 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 1831



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 1610 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 1666

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 1667 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1723

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 1724 KLGHGNSDRQRRPRQIEALQGEE 1746


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4322

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAW 4314

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4315 GSNSEGQLGLGHTNHVREPTLVTV 4338



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4219



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 145/314 (46%), Gaps = 12/314 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R +F     V  V     H  FVL  G V+TCG N     GH  + +   RP  V AL  
Sbjct: 27  RCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---RPEQVGALDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 275
                V+ G   T  L  +G V+  G    GQLG   T +    P++I  L ++  +VQ+
Sbjct: 84  QNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDI-QIVQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA++    V+S+G      LG G E   +  P+ I++    GI   +++AG  
Sbjct: 143 ACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLL--GIPFAQIAAGGA 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L  SG V+ WG+   G LG  DE D+ +P  L SL+S   V +   +  T  L   
Sbjct: 201 HSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 453
           G V+ FG  G+G LG      +   + PR +  L  + V+QI+ G  HT   V   GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 454 GFGDNERAQLGHDT 467
            FG     QLG  T
Sbjct: 318 SFGLGGNGQLGMGT 331



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR          + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKRPEQVG 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G   +  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P+ + SL      Q+ 
Sbjct: 137 IQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+V+G+G   FG LG  D   +D+ + P +L SLR+  +  IS G  H
Sbjct: 197 AGGAHSFVLTLSGAVFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYISCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVF 289



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 137/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +     ++    A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKRP---EQVGALDAQNIVTVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G       G   T      PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G +   + +P+ I  L  +    QIAAG ++   +T +G V+ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLLGI-PFAQIAAGGAHSFVLTLSGAVFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +S G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYISCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L  ++  Q+ C R+  +  +  TG +Y FG  G G LG
Sbjct: 278 STAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLG 328



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 129/265 (48%), Gaps = 7/265 (2%)

Query: 110 SAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVV 167
            A N + ++ G  HTL +++   V++ G ++ G LG  G E    V    I   S   +V
Sbjct: 82  DAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVP-RNIKSLSDIQIV 140

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           QV+    H+  + +  +VF+ G N     G     +    P+++++L G+P  Q+ AG  
Sbjct: 141 QVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGA 200

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  LT+ G V   G N  GQLG  D  DR  P  +  L     +V I+ G  +  A+T 
Sbjct: 201 HSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYISCGEDHTAALTK 259

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVY 346
            G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + S+G +Y
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTAHEINPRKV--FELMGNIVTQIACGRQHTSAFVPSTGRIY 317

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLS 371
           ++G G  G LG G   ++  P P+ 
Sbjct: 318 SFGLGGNGQLGMGTTSNRKSPFPVK 342


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 139/308 (45%), Gaps = 23/308 (7%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           HA  V + G++F+ G+ S    GH      +  P++++ L G   + V  G   T  +T+
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLGH-GVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++T G  TH  G LGHG  +    P+ ++   E   V  I+ G  +   VT  G ++
Sbjct: 360 SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------- 339
           +FG GS   LGHG+      PR ++T R  G+   +V+ G  H  A              
Sbjct: 420 TFGDGSFGALGHGDHITSNFPREVETLR--GLRTTKVACGVWHTAAAVEAINELSDSGTS 477

Query: 340 --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
              SS  +YTWG G  G LGHGD   + +PE +++L      QV      T  L   G V
Sbjct: 478 ASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRV 537

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           Y  G   +G LG      ++  L   +   +    V +++ G YH  V+T +  ++ +G 
Sbjct: 538 YTMGSTAYGQLG---SATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGK 594

Query: 458 NERAQLGH 465
               QLGH
Sbjct: 595 GLNGQLGH 602



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 136/305 (44%), Gaps = 23/305 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           I++T +G  ++ +  G YHT  ++ S     +  G+   G+LGHG E +  +        
Sbjct: 335 IIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQM 394

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               V  +S    H A V  +GQ+FT GD S    GH D     F PR VE L+G+   +
Sbjct: 395 EGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF-PREVETLRGLRTTK 453

Query: 222 VTAGLNFTGF-------LTIRG--------HVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           V  G+  T         L+  G         ++T G    G+LGHGD   R  P+ +A L
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
            E   + Q+A G    +A+T  G VY+ GS +   LG    + +L P  ++        V
Sbjct: 514 MEE-RICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKL-PTCVEGEIANSF-V 570

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
             V+ G  HV  L S   VYTWGKG  G LGHGD   +  P  +  LK      V    +
Sbjct: 571 EEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSK 630

Query: 387 KTFVL 391
            T V+
Sbjct: 631 FTVVI 635



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 28/298 (9%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +    +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
              +V  +A G  +  AVT +G +Y++G G+ N+  LGHG +     P+ + + + +GI 
Sbjct: 341 GT-NVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKV-SGQMEGIR 398

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  +S G  H   + S+G ++T+G G  GALGHGD I    P  + +L+     +V    
Sbjct: 399 VSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGV 458

Query: 386 RKTFVLV-------DTGS--------VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
             T   V       D+G+        +Y +G    G LG  D   ++  L P  + +L  
Sbjct: 459 WHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGD---NEPRLVPECVAALME 515

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 482
             + Q++ G   TV +T  GR++  G     QLG  T  G L      E    F++E+
Sbjct: 516 ERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEV 573



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 25/248 (10%)

Query: 255 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 314
           LD   PK++     V  V  IA G  + + VT  G ++S+G  S   LGHG + D   P+
Sbjct: 276 LDALLPKALESTV-VLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPK 334

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 372
            I T    G +V  V+ G+ H  A+  SG +YTWG G    G LGHG E+   +P+ +S 
Sbjct: 335 IIDTL--SGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSG 392

Query: 373 LKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
               + V  +      T V+   G ++ FG   FG+LG  D   S+    PR +++LR  
Sbjct: 393 QMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSN---FPREVETLRGL 449

Query: 432 HVSQISTGLYHTVV-------VTDRG--------RLFGFGDNERAQLGHDTLRGCLEPTE 476
             ++++ G++HT         ++D G        +L+ +GD ++ +LGH      L P E
Sbjct: 450 RTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVP-E 508

Query: 477 IFIQEMEE 484
                MEE
Sbjct: 509 CVAALMEE 516



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 144/345 (41%), Gaps = 26/345 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 178
           GR+  L+     +FS G    G LGHG E    VS  + I+  S  +V  V+  E H   
Sbjct: 299 GRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCA 356

Query: 179 VLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
           V  SG ++T GD +      GH          ++   ++G+    ++ G   T  +T  G
Sbjct: 357 VTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAG 416

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS------VVQIAAGPSYMLAVTGNGV 290
            + T G  + G LGHGD +    P+ +  L  + +      V   AA    +  ++ +G 
Sbjct: 417 QLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGT 476

Query: 291 --------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
                   +Y++G G    LGHG+    L P  +     +   + +V+ G++  VAL ++
Sbjct: 477 SASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEE--RICQVACGNDLTVALTTA 534

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G VYT G    G LG      K LP  +   + +    +V        VL     VY +G
Sbjct: 535 GRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWG 593

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
               G LG  D    +    P I+D L+   V  ++ G   TVV+
Sbjct: 594 KGLNGQLGHGDNNHRNT---PTIVDVLKDKQVKNVACGSKFTVVI 635



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 15/131 (11%)

Query: 339 LDSSGYVYTWGKGYCGALGH------------GDEIDKTLPEPLSSLKSHLAVQVCARKR 386
            D+ G VY WG+G    L                ++D  LP+ L S        +    R
Sbjct: 241 FDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGR 300

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              ++   G ++ +G    G LG    GV   V  P+I+D+L   +V  ++ G YHT  V
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLG---HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAV 357

Query: 447 TDRGRLFGFGD 457
           T  G L+ +GD
Sbjct: 358 TLSGDLYTWGD 368


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 168/346 (48%), Gaps = 21/346 (6%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4033 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4091

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4092 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4150

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSV-------VQIAAGPSYM 282
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G         +Q+A G ++ 
Sbjct: 4151 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHT 4210

Query: 283  LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            LAV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL  
Sbjct: 4211 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTK 4268

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G+VYT+G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G
Sbjct: 4269 DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWG 4328

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
                G LG    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4329 SNSEGQLGL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4371



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 398 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 455

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 456 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 513

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 514 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 569

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 570 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 629

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 630 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 682

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 683 EVYAWGNNSMGQCGQ 697



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 525

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 581

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 640

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 641 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 696

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 697 QGNSTGPITKPKKVSGLDGIAIQQISA 723



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 19/332 (5%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4026 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4083

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4084 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4142

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--------RRKGIHVVR 328
             G  +   VT +G +++FG+G    LG G   ++  P  +           R   +  ++
Sbjct: 4143 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQ 4202

Query: 329  VSAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            V+ G  H +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + 
Sbjct: 4203 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4262

Query: 388  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            +  L   G VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ + 
Sbjct: 4263 SVALTKDGHVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA 4319

Query: 448  DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
              G ++ +G N   QLG        EPT + +
Sbjct: 4320 STGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4351



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 21/240 (8%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 4001 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4055

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4056 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4115

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4116 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4173

Query: 416  SDKVLRPRILDSLRAHHVS----------QISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + +           Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4174 SNKKL-PERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4232



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 372 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 427

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 428 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 486

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 487 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 543



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4001 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4057

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4058 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4114

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4115 KLGHGNSDRQRRPRQIEALQGEE 4137



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 627 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 684

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 685 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 724


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 152/315 (48%), Gaps = 22/315 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+ V+ LK    + V  G
Sbjct: 273 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKFVDGLKNFNVELVACG 331

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              +  +T+ G ++  G N +  G LG G    +  P+ ++ PLE +  V  ++ GP + 
Sbjct: 332 EYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGI-HVSSVSCGPWHT 390

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT  G +++FG G+   LGHG++     PR +++   KG+  +RV+ G  H  A+   
Sbjct: 391 AVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESL--KGLRTMRVACGVWHTAAVVEV 448

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G  G LGHGD+  + +P  +++L      QV      T  
Sbjct: 449 MVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVACGHSLTVA 508

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  +G VY  G   +G LG P    +D  +  R+   L  + V +++ G YH  V+T R 
Sbjct: 509 LTTSGQVYTMGSPVYGQLGNPQ---ADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRT 565

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G     +LGH
Sbjct: 566 EVYTWGKGANGRLGH 580



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 116/246 (47%), Gaps = 16/246 (6%)

Query: 141 GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD 200
           G+LG G E TQ V           HV  VS    H A V  +GQ+FT GD +    GH D
Sbjct: 355 GLLGCGSEATQWVPRKLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 414

Query: 201 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT------------IRGHVHTCGSNTHGQ 248
            +  +  PR VE+LKG+   +V  G+  T  +               G + T G    G+
Sbjct: 415 RSS-VSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 473

Query: 249 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
           LGHGD   R  P  +A L E  S  Q+A G S  +A+T +G VY+ GS     LG+  Q 
Sbjct: 474 LGHGDKEARLVPTYVATLVEP-SFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGN-PQA 531

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D   P  ++    K   V  ++ G  HV  L S   VYTWGKG  G LGHGD  D+  P 
Sbjct: 532 DGKVPTRVEGKLMKNF-VEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPS 590

Query: 369 PLSSLK 374
            + +LK
Sbjct: 591 IVEALK 596



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 27/307 (8%)

Query: 197 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 256
           G  D     F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D
Sbjct: 251 GGSDIQMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD 310

Query: 257 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPR 314
              PK +  L+   +V  +A G     AVT +G +Y +G  + NF  LG G +  +  PR
Sbjct: 311 VSHPKFVDGLKNF-NVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPR 369

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            + +   +GIHV  VS G  H   + S+G ++T+G G  G LGHGD    + P  + SLK
Sbjct: 370 KL-SGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLK 428

Query: 375 SHLAVQVCARKRKTFVLVDT------------GSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
               ++V      T  +V+             G ++ +G    G LG  D+   +  L P
Sbjct: 429 GLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDK---EARLVP 485

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI----- 477
             + +L      Q++ G   TV +T  G+++  G     QLG+    G + PT +     
Sbjct: 486 TYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKV-PTRVEGKLM 544

Query: 478 --FIQEM 482
             F++E+
Sbjct: 545 KNFVEEL 551



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 146/353 (41%), Gaps = 38/353 (10%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAHVVQVS 170
           I  GR H  L++    VFS G  L G LGHG ++   VS  +      NF    +V  V+
Sbjct: 276 IACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKFVDGLKNF----NVELVA 329

Query: 171 ASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPR-LVEALKGVPCKQVTAG 225
             E  +  V  SG ++  G N+       CG   T    + PR L   L+G+    V+ G
Sbjct: 330 CGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQ---WVPRKLSGPLEGIHVSSVSCG 386

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              T  +T  G + T G  T G LGHGD     TP+ +  L+ +   +++A G  +  AV
Sbjct: 387 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGL-RTMRVACGVWHTAAV 445

Query: 286 T------------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
                         +G ++++G G    LGHG++   L P  + T         +V+ G 
Sbjct: 446 VEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSF--CQVACGH 503

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
              VAL +SG VYT G    G LG+     K        L  +   ++        VL  
Sbjct: 504 SLTVALTTSGQVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTS 563

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              VY +G    G LG  D   +D    P I+++L+   V  I  G   T  +
Sbjct: 564 RTEVYTWGKGANGRLGHGD---TDDRNFPSIVEALKDKQVKGIICGTSFTAAI 613



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 13/195 (6%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R +R    V H++ +VE        +  G   +   S+  +F+ G    G LGHG +  +
Sbjct: 431 RTMRVACGVWHTAAVVE--------VMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEAR 482

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T +         QV+   +    +  SGQV+T G       G+   +  +  P  V
Sbjct: 483 LVP-TYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKV--PTRV 539

Query: 212 EA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           E  L     +++  G      LT R  V+T G   +G+LGHGDT DR  P  +  L++  
Sbjct: 540 EGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKD-K 598

Query: 271 SVVQIAAGPSYMLAV 285
            V  I  G S+  A+
Sbjct: 599 QVKGIICGTSFTAAI 613



 Score = 38.5 bits (88), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASE 173
           Q+  G   T+ ++ S  V++ GS + G LG+ P+    V  TR+      + V+ ++   
Sbjct: 498 QVACGHSLTVALTTSGQVYTMGSPVYGQLGN-PQADGKVP-TRVEGKLMKNFVEELACGA 555

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H A +    +V+T G  ++   GH DT+   F P +VEALK    K +  G +FT  + 
Sbjct: 556 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNF-PSIVEALKDKQVKGIICGTSFTAAIC 614

Query: 234 IRGHV 238
           +   V
Sbjct: 615 LHKWV 619


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
           Q+  G+  T +I +N +V +CG    G LG G  +      T I+      V Q+     
Sbjct: 186 QVICGQNCTFVIQANGTVLACGEGSYGRLGQG-NSDDLHVLTVISALQGFVVTQLVTSCG 244

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 245 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 303

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
           +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 304 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 360

Query: 290 -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
            +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 361 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 418

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G    G L
Sbjct: 419 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 478

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 479 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 514



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
           PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 179 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 236

Query: 220 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
            Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 237 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 295

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 296 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 353

Query: 337 VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
           +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 354 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 413

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 414 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAW 470

Query: 456 GDNERAQLGHDTLRGCLEPTEIFI 479
           G N   QLG        EPT + +
Sbjct: 471 GSNSEGQLGLGHTNHVREPTLVTV 494



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238 VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
           V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 154 VYLWGAGRHGQLAEAGRNVMVP---ATAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 208

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
           GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 209 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 268

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 269 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 326

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
           S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 327 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 375



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 154 VYLWGAGRHGQLA---EAGRNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 210

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
           +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 211 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 267

Query: 462 QLGHDTLRGCLEPTEIFIQEMEE 484
           +LGH        P +I   + EE
Sbjct: 268 KLGHGNSDRQRRPRQIEALQGEE 290


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 148/324 (45%), Gaps = 12/324 (3%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R  F     V  V     H  F+L+ G V+TCG N     GH    +   +P  V +L  
Sbjct: 27  RCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKARK---KPEQVVSLDA 83

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQI 275
                V+ G   T  L  +G V   G  + GQLG     D    P+++  L EV  + Q+
Sbjct: 84  QNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEV-HITQV 142

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDE 334
           A G  + LA+   G ++S+G      LG G+Q   +  P+ IQ+   +GI   ++SAG  
Sbjct: 143 ACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSL--QGIPFGQISAGGA 200

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L  SG ++ WG+   G LG GD  D+  P  L +L+S   V +C  +  T  L   
Sbjct: 201 HSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKE 260

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLF 453
           G V+ FG  G+G LG      ++  + PR +  L    VSQI+ G  HT+  +   G++ 
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKID 317

Query: 454 GFGDNERAQLGHDTLRGCLEPTEI 477
            FG     QLG  +    + PT +
Sbjct: 318 SFGLGGNGQLGTRSTCNRISPTPV 341



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  E  +G   + V  G   T FL   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  LLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKA--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L +  ++V ++ G ++ LA+   G V+++G GS+  LG     D L+ PR +++     
Sbjct: 80  SL-DAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSE-- 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           +H+ +V+ G  H +AL   G +++WG+   G LG G +      P+ + SL+     Q+ 
Sbjct: 137 VHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQIS 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  +G+++G+G   FG LG  D   +D    P +L +LR+  V  I  G  H
Sbjct: 197 AGGAHSFGLTLSGAIFGWGRNKFGQLGLGD---NDDRRFPVLLKTLRSQQVVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVF 289



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 21/320 (6%)

Query: 120 GRYHTL-LISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQVSASE 173
           GR HT+ L+ + +V++CG +  G LGH      PE  Q VS        A ++V VS  E
Sbjct: 42  GRRHTVFLLEDGTVYTCGCNDLGQLGHEKARKKPE--QVVSL------DAQNIVAVSCGE 93

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   +   GQVF  G  S    G       +  PR V++L  V   QV  G   +  L 
Sbjct: 94  AHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALA 153

Query: 234 IRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
             G + + G N +GQLG G       +P+ I  L+ +    QI+AG ++   +T +G ++
Sbjct: 154 RGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGI-PFGQISAGGAHSFGLTLSGAIF 212

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G      LG G+  D   P  ++T R +   VV +  G++H  AL   G V+T+G G 
Sbjct: 213 GWGRNKFGQLGLGDNDDRRFPVLLKTLRSQ--QVVYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
            G LGH     +  P  +  L   +  Q+ C R+     +  +G +  FG  G G LG  
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLG-- 328

Query: 412 DRGVSDKVLRPRILDSLRAH 431
            R   +++    +    RAH
Sbjct: 329 TRSTCNRISPTPVKGCWRAH 348


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 162/340 (47%), Gaps = 17/340 (5%)

Query: 132 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           ++  G++  G LG G  E  Q ++ +++ +   + V Q++    H  F+  SG+V+ CG 
Sbjct: 3   LYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGS 62

Query: 191 NSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
           N     GH   + RP+  P LV+ +      Q+  G   +  LT  G V + G N  GQL
Sbjct: 63  NDYAQLGHELSSKRPLQIPELVDCV----ITQIACGSRHSMALTEWGQVLSWGDNECGQL 118

Query: 250 GHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
           GH    D    PK++  L    +VVQIA G ++ LA+T  G +Y++GS     LG     
Sbjct: 119 GHASDQDVVQLPKTVRALVS-KTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKTPS 177

Query: 309 DELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           +  Q   P  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  DE ++ 
Sbjct: 178 ELGQCNAPMLLTTLL--GIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            P  L +L++     V      +  L + G V+  G   +G LG    G     + PR++
Sbjct: 236 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLG---HGFCGNEMLPRMV 292

Query: 426 DSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 464
             L    +SQ++ G  HT+ +V  RGR++GFG     QLG
Sbjct: 293 MELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLG 332



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 137/315 (43%), Gaps = 43/315 (13%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG---------PETTQCVSFTRINFPSAAH 165
           QI  G  HTL ++ S  V++CGS+    LGH          PE   CV            
Sbjct: 40  QIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSKRPLQIPELVDCV------------ 87

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           + Q++    H+  + + GQV + GDN     GH      +  P+ V AL      Q+  G
Sbjct: 88  ITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACG 147

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVG----SVVQIAA 277
            N +  LT  G ++  GSN +GQLG        TP  +    AP+         V  IA 
Sbjct: 148 NNHSLALTCCGELYAWGSNIYGQLG------VKTPSELGQCNAPMLLTTLLGIPVRAIAC 201

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
           G ++   ++ +  V  FG G N C  LG  ++ +   P  ++T R  G+    V+ GDE 
Sbjct: 202 GGNHSFLISKSSAV--FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRF--VACGDEF 257

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT- 394
            V L + G V+T G G  G LGHG   ++ LP  +  L      QV    R T  +V   
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPAR 317

Query: 395 GSVYGFGWMGFGSLG 409
           G +YGFG    G LG
Sbjct: 318 GRIYGFGLGSSGQLG 332



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 113/245 (46%), Gaps = 10/245 (4%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            ++  G+ +HGQLG G   D    TP  + P +   +V QIA G  + L +T +G VY+ 
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKM-PWQPDSAVNQIACGHRHTLFLTASGKVYAC 60

Query: 295 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           GS     LGH     EL   R +Q        + +++ G  H +AL   G V +WG   C
Sbjct: 61  GSNDYAQLGH-----ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 354 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
           G LGH  + D   LP+ + +L S   VQ+      +  L   G +Y +G   +G LG   
Sbjct: 116 GQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGVKT 175

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                +   P +L +L    V  I+ G  H+ +++    +FG+G N   QLG +      
Sbjct: 176 PSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRA 235

Query: 473 EPTEI 477
            PT++
Sbjct: 236 YPTQL 240



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 4/149 (2%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H+ LIS SS VF  G + CG LG   ET +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 234
           + F+   G VFTCG  +    GH      +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGAYGQLGHGFCGNEML-PRMVMELMGSTISQVACGNRHTLAMVPA 316

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           RG ++  G  + GQLG  +T     P+ +
Sbjct: 317 RGRIYGFGLGSSGQLGTRNTKSLNLPQMV 345


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 156/303 (51%), Gaps = 12/303 (3%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS---KPEQIGALAGQHIVHVAC 91

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 283
           G + +  L+ +G + + G+ + GQLG     D  T P+ I  L +  +++Q++ G  + L
Sbjct: 92  GESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQVSCGNWHCL 150

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 461
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 462 QLG 464
           QLG
Sbjct: 326 QLG 328



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 136/266 (51%), Gaps = 20/266 (7%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQ 274
           K+V  G N + FL   G V+TCG NT GQLGH     +P        E++G+     +V 
Sbjct: 37  KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP--------EQIGALAGQHIVH 88

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGD 333
           +A G S+ LA++  G ++S+G+GS+  LG     D +  PR I+   ++ I  ++VS G+
Sbjct: 89  VACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTI--LQVSCGN 146

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            H +AL + G  +TWG+   G LG G E   +  P+ + SL      QV A    +F L 
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G+V+G+G    G LG  D    +    P  +  LR+  V  IS G  HT V+T  G +
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRES---PCHVKLLRSQKVVYISCGEEHTAVLTKSGGV 263

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIF 478
           F FG     QLGHD++   + P  + 
Sbjct: 264 FTFGAGSCGQLGHDSMNDEVNPRRVL 289



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 15/310 (4%)

Query: 102 HSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           H  ++ E + G       G +   L+ +  V++CG +  G LGH  E ++     +I   
Sbjct: 32  HDRNVKEVACG-------GNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP---EQIGAL 81

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
           +  H+V V+  E+H+  +   GQ+F+ G  S    G       +  PRL++ L      Q
Sbjct: 82  AGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ 141

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           V+ G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG +
Sbjct: 142 VSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGA 200

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           +  A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L 
Sbjct: 201 HSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLT 258

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYG 399
            SG V+T+G G CG LGH    D+  P  +  L      Q+ C R      +  +G +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYA 318

Query: 400 FGWMGFGSLG 409
           FG    G LG
Sbjct: 319 FGCGTRGQLG 328



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGN 146

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 352
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLA 378
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSH---LAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           WG    G  G G  I   +PEP      H   +    C      F+L D G VY  G   
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG    G      +P  + +L   H+  ++ G  H++ ++D+G+LF +G     QLG
Sbjct: 63  KGQLGHDCEGS-----KPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG 117

Query: 465 HDTLRGCLEPTEIFIQEMEEDTGL 488
             T+   +    + I+++ + T L
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQTIL 140


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4024 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4082

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4083 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4141

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4142 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4198

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4199 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4256

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4257 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4316

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4317 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4017 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4074

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4075 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4133

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4134 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4191

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4192 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4251

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4252 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4308

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4309 GSNSEGQLGLGHTNHVREPT 4328



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3992 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4046

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4047 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4106

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4107 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4164

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+ D   ++ FGD +  +LG
Sbjct: 4165 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4213



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3992 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4048

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4049 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4105

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4106 KLGHGNSDRQRRPRQIEALQGEE 4128


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 155/332 (46%), Gaps = 14/332 (4%)

Query: 132 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           VF  G S  G L  G  E T  +S   ++      + ++S  E H   V + G++++CG 
Sbjct: 4   VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63

Query: 191 NSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
           N     GH   R     I    LV +L  +   Q   G  F+  +T  G V + G N  G
Sbjct: 64  NEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKG 123

Query: 248 QLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           QLG G     +   PK +  L  V +VVQI  G ++ LA+T +G ++S+G      LG G
Sbjct: 124 QLGRGKLSKEEERKPKLMKSLA-VCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLG 182

Query: 306 EQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
             H     P+ I   R  GI + ++++G  H   L  S  V+ WGK   G LG  DE DK
Sbjct: 183 SSHSFHDTPQQIVCLR--GIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDK 240

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
           + P    SL++   + +   +  T  L   G V+ FG  GFG LG       +++L  R+
Sbjct: 241 SHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLG--HNSTQNEILPKRV 298

Query: 425 LDSLRAHHVSQISTGLYHTVVVT-DRGRLFGF 455
           ++ L    +SQ++ G  HTV  +   G+++ F
Sbjct: 299 ME-LMGSVISQVACGRRHTVAFSPSSGKMYAF 329



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 139/282 (49%), Gaps = 15/282 (5%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           I  P+ V  L+ +  K+++ G   T  +T  G +++CGSN +G+LGH     R    SI 
Sbjct: 25  ILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAV--SID 82

Query: 265 PLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQ 317
            +E V S     V+Q A G  + L +T  G V+S+G      LG G+  + +E +P+ ++
Sbjct: 83  VVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMK 142

Query: 318 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSH 376
           +       VV+++ G  H +AL   G +++WG    G LG G        P+ +  L+  
Sbjct: 143 SL--AVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGI 200

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
              Q+ +    +F+L  + +V+G+G   FG LG  D    DK   P +  SLR   V  I
Sbjct: 201 PIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDE--YDKS-HPTLCKSLRNQKVMYI 257

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           S G  HTV +T  G +F FG     QLGH++ +  + P  + 
Sbjct: 258 SCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVM 299



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 147/292 (50%), Gaps = 10/292 (3%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP---SAAHVVQVSA 171
           +I+ G  HTL+++ +  ++SCGS+  G LGH    ++ VS   +      S+  V+Q + 
Sbjct: 41  EISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAG 100

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTG 230
               +  +  +G+VF+ G N     G    ++   R P+L+++L      Q+T G N   
Sbjct: 101 GSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCL 160

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
            LT  G + + G N +GQLG G +     TP+ I  L  +  + QIA+G ++   +T + 
Sbjct: 161 ALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRGI-PIAQIASGGNHSFILTWSR 219

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+ +G  S   LG  +++D+  P   ++ R +   V+ +S G++H VAL   G V+++G
Sbjct: 220 AVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQ--KVMYISCGEDHTVALTKEGGVFSFG 277

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGF 400
            G  G LGH    ++ LP+ +  L   +  QV C R+        +G +Y F
Sbjct: 278 AGGFGQLGHNSTQNEILPKRVMELMGSVISQVACGRRHTVAFSPSSGKMYAF 329



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 133/277 (48%), Gaps = 10/277 (3%)

Query: 103 SSDIVE-TSAGNQMQITT---GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 157
           S D+VE  S+ + MQ+     G   +L+I+ +  VFS G +  G LG G  + +     +
Sbjct: 80  SIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLGRGKLSKEEERKPK 139

Query: 158 INFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           +    A   VVQ++   NH   +   G++F+ G N     G   ++     P+ +  L+G
Sbjct: 140 LMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHSFHDTPQQIVCLRG 199

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
           +P  Q+ +G N +  LT    V   G N+ GQLG  D  D+  P     L     V+ I+
Sbjct: 200 IPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRN-QKVMYIS 258

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G  + +A+T  G V+SFG+G    LGH    +E+ P+ +      G  + +V+ G  H 
Sbjct: 259 CGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELM--GSVISQVACGRRHT 316

Query: 337 VALD-SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           VA   SSG +Y +G G  G LG GD   +  P P+ S
Sbjct: 317 VAFSPSSGKMYAFGSGGSGQLGLGDTSARNSPFPILS 353



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 7/74 (9%)

Query: 400 FGW----MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           FGW     G  S+GF +      +L P+ +  L+   + +IS G  HT++VT  G+L+  
Sbjct: 5   FGWGRSNDGQLSIGFSEET---SILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSC 61

Query: 456 GDNERAQLGHDTLR 469
           G NE  +LGH   R
Sbjct: 62  GSNEYGELGHSKPR 75


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 156/303 (51%), Gaps = 12/303 (3%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
           +V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL G     V  
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEGS---KPEQIGALAGQHIVHVAC 91

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYML 283
           G + +  L+ +G + + G+ + GQLG     D  T P+ I  L +  +++Q++ G  + L
Sbjct: 92  GESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQ-QTILQVSCGNWHCL 150

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           A+  +G  +++G  S   LG G++   +  P+ +++    GI + +V+AG  H  AL  S
Sbjct: 151 ALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLS 208

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V+ WGK   G LG  DE D+  P  +  L+S   V +   +  T VL  +G V+ FG 
Sbjct: 209 GAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGA 268

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERA 461
              G LG     ++D+V  PR +  L    VSQI+ G +HT+  V   G ++ FG   R 
Sbjct: 269 GSCGQLG--HDSMNDEV-NPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRG 325

Query: 462 QLG 464
           QLG
Sbjct: 326 QLG 328



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 146/301 (48%), Gaps = 29/301 (9%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         I  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH     +P        E++G+     +V +A G S+ +A++  G ++S+G+GS+
Sbjct: 62  TKGQLGHDCEGSKP--------EQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR I+   ++ I  ++VS G+ H +AL + G  +TWG+   G LG 
Sbjct: 114 GQLGLTTIEDAVTVPRLIKKLNQQTI--LQVSCGNWHCLALAADGQFFTWGQNSYGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           G E   +  P+ + SL      QV A    +F L  +G+V+G+G    G LG  D    +
Sbjct: 172 GKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               P  +  LR+  V  IS G  HT V+T  G +F FG     QLGHD++   + P  +
Sbjct: 232 S---PCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288

Query: 478 F 478
            
Sbjct: 289 L 289



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 15/310 (4%)

Query: 102 HSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           H  ++ E + G       G +   L+ +  V++CG +  G LGH  E ++     +I   
Sbjct: 32  HDRNVKEVACG-------GNHSVFLLEDGEVYTCGLNTKGQLGHDCEGSKP---EQIGAL 81

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
           +  H+V V+  E+H+  +   GQ+F+ G  S    G       +  PRL++ L      Q
Sbjct: 82  AGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ 141

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           V+ G      L   G   T G N++GQLG G +   + +P+ +  L+ +  + Q+AAG +
Sbjct: 142 VSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PLAQVAAGGA 200

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           +  A++ +G V+ +G  S+  LG  ++ D   P  ++  R +   VV +S G+EH   L 
Sbjct: 201 HSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQ--KVVYISCGEEHTAVLT 258

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYG 399
            SG V+T+G G CG LGH    D+  P  +  L      Q+ C R      +  +G +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYA 318

Query: 400 FGWMGFGSLG 409
           FG    G LG
Sbjct: 319 FGCGTRGQLG 328



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H++ +S+   +FS G+   G LG             I   +   ++QVS   
Sbjct: 87  VHVACGESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGN 146

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   +   GQ FT G NS    G          P+ V++L G+P  QV AG   +  L+
Sbjct: 147 WHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           + G V   G N+ GQLG  D  DR +P  +  L     VV I+ G  +   +T +G V++
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRS-QKVVYISCGEEHTAVLTKSGGVFT 265

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGY 352
           FG+GS   LGH   +DE+ PR +      G  V +++ G  H +A + SSG +Y +G G 
Sbjct: 266 FGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLA 378
            G LG G   +   P P   +K H A
Sbjct: 324 RGQLGTGHTCNVKCPSP---VKGHWA 346



 Score = 47.0 bits (110), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSH---LAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           WG    G  G G  +   +PEP      H   +    C      F+L D G VY  G   
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLED-GEVYTCGLNT 62

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG    G      +P  + +L   H+  ++ G  H+V ++D+G+LF +G     QLG
Sbjct: 63  KGQLGHDCEGS-----KPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLG 117

Query: 465 HDTLRGCLEPTEIFIQEMEEDTGL 488
             T+   +    + I+++ + T L
Sbjct: 118 LTTIEDAVTVPRL-IKKLNQQTIL 140


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 21/347 (6%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 170 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 229

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 230 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 288

Query: 251 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 289 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 347

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 357
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 348 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 405

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           H D+  K +P  +  L      QV   K +T VL  TG V+  G    G LG P   +S+
Sbjct: 406 HADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP---LSE 462

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                 I   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 463 DTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLG 509



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 142/312 (45%), Gaps = 19/312 (6%)

Query: 168 QVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG 225
           Q S+   H A+   S   +F  G+       H D ++  +  PRL+     +  + V  G
Sbjct: 152 QKSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACG 211

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
                 +T +G V + G +  G+LGH  ++    PK I  L     V  IA G  +  AV
Sbjct: 212 EKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAV 270

Query: 286 TGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSG 343
           + +G +Y +G G++ CLG  G+Q+   Q    + F    GI +++++ G  H   + S+G
Sbjct: 271 SISGELYEWGEGTH-CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 329

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD---------- 393
            ++ +G G  G LGHGD +    P+ + SLK   A  +      T  +V+          
Sbjct: 330 QLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAP 389

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +G ++ +G    G LG  D+ +    L P  ++ L     +Q+S     T+V+T  G +F
Sbjct: 390 SGKLFTWGDADRGKLGHADKKMK---LVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVF 446

Query: 454 GFGDNERAQLGH 465
             G  E  +LG+
Sbjct: 447 TIGSKEHGRLGN 458



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 18/283 (6%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           I+E+ A  +++ I  G  HT  +S S     +  G+   G+ G   + +Q          
Sbjct: 248 IIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPL 307

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               +++++    H A +  +GQ+F  GD +    GH DT   + RP+ VE+LKGV  K 
Sbjct: 308 DGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKA 366

Query: 222 VTAGLNFTGFLTIR----------GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
           +  G   T  +  R          G + T G    G+LGH D   +  P  + PL +   
Sbjct: 367 IACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-D 425

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
             Q++   +  + +T  GVV++ GS  +  LG+    D      +     K   V  +S+
Sbjct: 426 FAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSED--TSICLIEGPLKTEFVREISS 483

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           G  H+  L  +G V+TWGKG  G LG GD +D++ P  + +L+
Sbjct: 484 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALE 526



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  +A G  +   VT  G V+S+G  +   LGH        P+ I++       V  ++ 
Sbjct: 205 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESL--ASTRVKAIAF 262

Query: 332 GDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKT--LPEPL-SSLKSHLAVQVCARKRK 387
           G +H  A+  SG +Y WG+G +C  L  GD+  ++   P  L   L     +++      
Sbjct: 263 GAKHTCAVSISGELYEWGEGTHCLGLW-GDQYQRSQWFPHKLFGPLDGISILKIACGHWH 321

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T ++   G ++ +G   FG LG  D   +  V RP+ ++SL+      I+ G +HT  + 
Sbjct: 322 TAIISSAGQLFAYGDGTFGVLGHGD---TLTVARPKQVESLKGVRAKAIACGPWHTAAIV 378

Query: 448 DR----------GRLFGFGDNERAQLGHDTLRGCLEPT 475
           +R          G+LF +GD +R +LGH   +  L PT
Sbjct: 379 ERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPT 416



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 291 VYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           ++ +G      L HG+  + +   PR + T     I V  V+ G++H   +   G V++W
Sbjct: 170 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHI--IDVQSVACGEKHAAIVTKQGEVFSW 227

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G    G LGH   +  + P+ + SL S     +    + T  +  +G +Y +G  G   L
Sbjct: 228 GVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG-EGTHCL 286

Query: 409 G-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-D 466
           G + D+    +    ++   L    + +I+ G +HT +++  G+LF +GD     LGH D
Sbjct: 287 GLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGD 346

Query: 467 TL 468
           TL
Sbjct: 347 TL 348



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 89/234 (38%), Gaps = 66/234 (28%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           ++I  G +HT +IS++  +F+ G    GVLGHG +T       ++          ++   
Sbjct: 313 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG-DTLTVARPKQVESLKGVRAKAIACGP 371

Query: 174 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP 218
            H A +++          SG++FT GD      GH D    +  P  VE L       V 
Sbjct: 372 WHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV-PTCVEPLNDFDFAQVS 430

Query: 219 C-----------------------------------------------KQVTAGLNFTGF 231
           C                                               +++++G +    
Sbjct: 431 CAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAV 490

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
           LT+ G V T G  T GQLG GD +DR  P  +  LE+   V  IA G ++ +A+
Sbjct: 491 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALED-KQVHSIACGFNFTMAI 543


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 158/332 (47%), Gaps = 23/332 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V+    HAA V +  +VFT G+  S   GH      IF+PRLVE+L     + +  G
Sbjct: 263 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGH-GAGTSIFQPRLVESLSICNVETIACG 321

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PLE +  V  ++ G  + 
Sbjct: 322 EFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL-QVSAVSCGTWHT 380

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 381 ALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESL--KGLRTISVSCGVWHTAAVVEV 438

Query: 340 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
                  SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L  
Sbjct: 439 IMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTT 498

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRL 452
           +G ++  G   +G LG P+    +    PR++ + L    V +++ G YH  V+T  G +
Sbjct: 499 SGHIFTAGSSVYGQLGNPN----NDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEV 554

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           + +G     +LGH  +     PT  F++ + +
Sbjct: 555 YTWGKGANGRLGHGDIADRKTPT--FVEALRD 584



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 138/303 (45%), Gaps = 22/303 (7%)

Query: 113 NQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQ 168
           N   I  G +HT  I+ +     +  G+   G+LGHG   +  +   R++ P     V  
Sbjct: 314 NVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLEGLQVSA 372

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           VS    H A +  SG+++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+
Sbjct: 373 VSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET---ISYPKEVESLKGLRTISVSCGV 429

Query: 227 NFTGFL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
             T  +         T  G + T G     +LGHGD   +  P  +  L +  +  +   
Sbjct: 430 WHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAVC 488

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G +  + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV 
Sbjct: 489 GHTLTIGLTTSGHIFTAGSSVYGQLGN-PNNDGRYPRLVEE-KLGGGGVVEVACGAYHVA 546

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            L  SG VYTWGKG  G LGHGD  D+  P  + +L+     ++      T  +    SV
Sbjct: 547 VLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSV 606

Query: 398 YGF 400
            G 
Sbjct: 607 SGM 609



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 20/338 (5%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           ++  L+   + VF+ G    G LGHG  T+       +   S  +V  ++  E H   + 
Sbjct: 271 KHAALVTRQAEVFTWGEECSGRLGHGAGTS-IFQPRLVESLSICNVETIACGEFHTCAIT 329

Query: 181 QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
            +G ++T GD  +++   GH          R+   L+G+    V+ G   T  +T  G +
Sbjct: 330 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKL 389

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 289
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV         T +G
Sbjct: 390 YTFGDGTFGVLGHGNRETISYPKEVESLKGL-RTISVSCGVWHTAAVVEVIMAQSNTSSG 448

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            ++++G G  + LGHG++  +L+P  + +      H  +   G    + L +SG+++T G
Sbjct: 449 KLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFH--KAVCGHTLTIGLTTSGHIFTAG 506

Query: 350 KGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
               G LG+ +  D   P  +   L     V+V        VL  +G VY +G    G L
Sbjct: 507 SSVYGQLGNPNN-DGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRL 565

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           G  D  ++D+   P  +++LR   V +I+ G   T  +
Sbjct: 566 GHGD--IADRKT-PTFVEALRDRSVKRIACGSGFTAAI 600



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 16/272 (5%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           I  P+ +E+   +    V  G+     +T +  V T G    G+LGHG       P+ + 
Sbjct: 249 ILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVE 308

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  + +V  IA G  +  A+T  G +Y++G G++    LGHG       P+ + +   +
Sbjct: 309 SL-SICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV-SGPLE 366

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P+ + SLK    + V 
Sbjct: 367 GLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVS 426

Query: 383 ARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
                T  +V+         +G ++ +G      LG  DR      L+P  + SL  ++ 
Sbjct: 427 CGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSK---LKPTCVPSLIDYNF 483

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            +   G   T+ +T  G +F  G +   QLG+
Sbjct: 484 HKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGN 515



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 2/155 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  V+ G +H   +     V+TWG+   G LGHG       P  + SL       +  
Sbjct: 261 LDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIAC 320

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 442
            +  T  +  TG +Y +G  G  + G    G +     P R+   L    VS +S G +H
Sbjct: 321 GEFHTCAITATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWH 379

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T ++T  G+L+ FGD     LGH        P E+
Sbjct: 380 TALITSSGKLYTFGDGTFGVLGHGNRETISYPKEV 414


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T+ G V+ CG 
Sbjct: 1795 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGE 1853

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ +  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 1854 ATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGK 1913

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + + I    ++ G  H  AL SSG +YTWG G  G LGHGD 
Sbjct: 1914 LGHFSRXNCDKPRLIEALKSRRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 1971

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  VQV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 1972 TTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 2028

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              P+ ++ L    V QI  G   ++ +T  G ++ +G  +  +LGH
Sbjct: 2029 NVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2074



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 157/326 (48%), Gaps = 12/326 (3%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA + VQV+        V   G+V+ CG+ ++   G   ++  +  PR V AL     K+
Sbjct: 1825 SALNAVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKK 1884

Query: 222  VT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      LT  G V + G    G+LGH    +   P+ I  L+    +  IA G 
Sbjct: 1885 VAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKS-RRIRDIACGS 1943

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVV 337
            S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  VV+V+ G  D   +
Sbjct: 1944 SHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--VGHRVVQVACGSRDAQTL 2001

Query: 338  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G V
Sbjct: 2002 ALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVV 2061

Query: 398  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
            + +G   +  LG    G    V +P++++ LR   +  ++ G  H + VTD G+++ +GD
Sbjct: 2062 WTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGD 2118

Query: 458  NERAQLGHDTLRGCLEPTEIFIQEME 483
            N+  Q G+ T     +PT   +Q +E
Sbjct: 2119 NDHGQQGNGTTTVNRKPT--LVQGLE 2142



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 2864 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 2923

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 2924 LRGI-EVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 2982

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             V   +GD   + L     V++WG G  G LG G      +P  + +L    AV+V    
Sbjct: 2983 DVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGS 3042

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3043 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 3099

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 3100 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 3128



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 137/280 (48%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 2878 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 2936

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 2937 AHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 2995

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  +      G+  V+V  G +  VAL  SG 
Sbjct: 2996 LTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDAL--TGLGAVKVECGSQFSVALTKSGA 3053

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3054 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 3113

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 3114 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 3150



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 7/242 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L ++  VFS G    G LGH      C     I    +  +  ++   +H+A +
Sbjct: 1891 GRHATALTADGKVFSWGEGDDGKLGHF-SRXNCDKPRLIEALKSRRIRDIACGSSHSAAL 1949

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1950 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGL 2008

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 2009 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 2067

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              F LGHG      +P+ ++  R  G  +V V+ G  H +A+  +G VY WG    G  G
Sbjct: 2068 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2125

Query: 358  HG 359
            +G
Sbjct: 2126 NG 2127



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 2876 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 2934

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T
Sbjct: 2935 GGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQT 2993

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  +  L  +G+ V++  G  + +A+T +G
Sbjct: 2994 LCLTEDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGA-VKVECGSQFSVALTKSG 3052

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 3053 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 3110

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 3111 DNDEGQLGDG 3120



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G V+  G N  GQLG   G  +  PTP +++A L       Q+  G   + AVT +G +Y
Sbjct: 2788 GTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPA----QLIGGEQTLFAVTADGKLY 2843

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 2844 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2903

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 2904 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSD 2963

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  ++  +G   T+ +T+   ++ +GD +  +LG     G
Sbjct: 2964 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDG 3020

Query: 471  CLEPTEI 477
            C  P ++
Sbjct: 3021 CKVPMKV 3027



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +++  +    V+V      + 
Sbjct: 2988 SGDAQTLCLTEDDTVWSWGDGDYGKLGRG-GSDGCKVPMKVDALTGLGAVKVECGSQFSV 3046

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3047 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 3105

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 3106 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 3151



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG VY WG  + G LG  +     +P P  +L +    Q+   ++  F + 
Sbjct: 2778 DDWTLSAGGSGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVT 2837

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 2838 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2894

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 2895 EVYSWGEAEDGKLGHGNRSPCDRPRVI 2921



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 12/139 (8%)

Query: 345  VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG   G +I   +  E LS+L    AVQV    +  F +   G VY  G
Sbjct: 1796 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---AVQVAGGSKSLFAVTVEGKVYACG 1852

Query: 402  WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
                G LG    GVS   V  PR + +L ++ V +++  +G  H   +T  G++F +G+ 
Sbjct: 1853 EATNGRLGL---GVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEG 1909

Query: 459  ERAQLGHDTLRGCLEPTEI 477
            +  +LGH +   C +P  I
Sbjct: 1910 DDGKLGHFSRXNCDKPRLI 1928


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 160/347 (46%), Gaps = 21/347 (6%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +F  G     VL HG  +   VS  R+ N      V  V+  E HAA V + G+VF+ G 
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 231

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           ++    GH+  +  +  P+++E+L     K +  G   T  ++I G ++  G  TH    
Sbjct: 232 DNGGRLGHK-VSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGL 290

Query: 251 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            GD   R      K   PL+ + S+++IA G  +   ++  G ++++G G+   LGHG+ 
Sbjct: 291 WGDQYQRSQWFPHKLFGPLDGI-SILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 349

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 357
               +P+ +++   KG+    ++ G  H  A+            SG ++TWG    G LG
Sbjct: 350 LTVARPKQVESL--KGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLG 407

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           H D+  K +P  +  L      QV   K +T VL  TG V+  G    G LG P   +S+
Sbjct: 408 HADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNP---LSE 464

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                 I   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 465 DTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLG 511



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 135/294 (45%), Gaps = 18/294 (6%)

Query: 185 VFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
           +F  G+       H D ++  +  PRL+     +  + V  G      +T +G V + G 
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVFSWGV 231

Query: 244 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
           +  G+LGH  ++    PK I  L     V  IA G  +  AV+ +G +Y +G G++ CLG
Sbjct: 232 DNGGRLGHKVSVSVSDPKIIESLAST-RVKAIAFGAKHTCAVSISGELYEWGEGTH-CLG 289

Query: 304 -HGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
             G+Q+   Q    + F    GI +++++ G  H   + S+G ++ +G G  G LGHGD 
Sbjct: 290 LWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT 349

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFP 411
           +    P+ + SLK   A  +      T  +V+          +G ++ +G    G LG  
Sbjct: 350 LTVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHA 409

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           D+ +    L P  ++ L     +Q+S     T+V+T  G +F  G  E  +LG+
Sbjct: 410 DKKMK---LVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGN 460



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 129/283 (45%), Gaps = 18/283 (6%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           I+E+ A  +++ I  G  HT  +S S     +  G+   G+ G   + +Q          
Sbjct: 250 IIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPL 309

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               +++++    H A +  +GQ+F  GD +    GH DT   + RP+ VE+LKGV  K 
Sbjct: 310 DGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDT-LTVARPKQVESLKGVRAKA 368

Query: 222 VTAGLNFTGFLTIR----------GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
           +  G   T  +  R          G + T G    G+LGH D   +  P  + PL +   
Sbjct: 369 IACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDF-D 427

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
             Q++   +  + +T  GVV++ GS  +  LG+    D      +     K   V  +S+
Sbjct: 428 FAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSED--TSICLIEGPLKTEFVREISS 485

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           G  H+  L  +G V+TWGKG  G LG GD +D++ P  + +L+
Sbjct: 486 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALE 528



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 20/218 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  +A G  +   VT  G V+S+G  +   LGH        P+ I++       V  ++ 
Sbjct: 207 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESL--ASTRVKAIAF 264

Query: 332 GDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKT--LPEPL-SSLKSHLAVQVCARKRK 387
           G +H  A+  SG +Y WG+G +C  L  GD+  ++   P  L   L     +++      
Sbjct: 265 GAKHTCAVSISGELYEWGEGTHCLGLW-GDQYQRSQWFPHKLFGPLDGISILKIACGHWH 323

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T ++   G ++ +G   FG LG  D   +  V RP+ ++SL+      I+ G +HT  + 
Sbjct: 324 TAIISSAGQLFAYGDGTFGVLGHGD---TLTVARPKQVESLKGVRAKAIACGPWHTAAIV 380

Query: 448 DR----------GRLFGFGDNERAQLGHDTLRGCLEPT 475
           +R          G+LF +GD +R +LGH   +  L PT
Sbjct: 381 ERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPT 418



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 7/182 (3%)

Query: 291 VYSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           ++ +G      L HG+  + +   PR + T     I V  V+ G++H   +   G V++W
Sbjct: 172 IFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHI--IDVQSVACGEKHAAIVTKQGEVFSW 229

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G    G LGH   +  + P+ + SL S     +    + T  +  +G +Y +G  G   L
Sbjct: 230 GVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG-EGTHCL 288

Query: 409 G-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-D 466
           G + D+    +    ++   L    + +I+ G +HT +++  G+LF +GD     LGH D
Sbjct: 289 GLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGD 348

Query: 467 TL 468
           TL
Sbjct: 349 TL 350



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 89/234 (38%), Gaps = 66/234 (28%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           ++I  G +HT +IS++  +F+ G    GVLGHG +T       ++          ++   
Sbjct: 315 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHG-DTLTVARPKQVESLKGVRAKAIACGP 373

Query: 174 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VP 218
            H A +++          SG++FT GD      GH D    +  P  VE L       V 
Sbjct: 374 WHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLV-PTCVEPLNDFDFAQVS 432

Query: 219 C-----------------------------------------------KQVTAGLNFTGF 231
           C                                               +++++G +    
Sbjct: 433 CAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAV 492

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
           LT+ G V T G  T GQLG GD +DR  P  +  LE+   V  IA G ++ +A+
Sbjct: 493 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALED-KQVHSIACGFNFTMAI 545


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4205

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4199 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+ D   ++ FGD +  +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4220



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4016 QVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQMVTSCG 4074

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4075 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4133

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + + G+  +G+LG G+T ++  P+ ++ LE  +VG   Q+A G ++ LAV+ +G
Sbjct: 4134 VTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVG---QVACGLNHTLAVSADG 4190

Query: 290  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
            + V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G VYT+
Sbjct: 4191 MTVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGNVYTF 4248

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ + +L       V      T  L  TG VY +G    G L
Sbjct: 4249 GQDRLIGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQL 4308

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4309 GL---GHTNHVREPTLISALQGKNIQQISAGRCHSAAWT 4344



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 161/337 (47%), Gaps = 16/337 (4%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 172
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 403 IEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRAIKKVSSSKGS 461

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 231
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 462 DGHTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVSAGYRHSAA 520

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 290
           ++  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 521 VSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 577

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+SFG G N  LGHG+ +   +P+ ++    +G+ + +V AG +  +AL S+G VY WG 
Sbjct: 578 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIRKVCAGSQSSLALTSTGQVYAWGC 635

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G C   G   E     P+ +  L +   V +         L     VY +G    G  G 
Sbjct: 636 GACLGCG-SSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG- 693

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
                +  + +P+ +  L    + QIS G  H++  T
Sbjct: 694 -QGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWT 729



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 147/316 (46%), Gaps = 27/316 (8%)

Query: 161 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEA 213
           PS +    + A + +  FV+ S G V  CG  S    G  D+N      +  F P    A
Sbjct: 395 PSFSDAQTIEAGQ-YCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RA 451

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           +K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV
Sbjct: 452 IKKVSSSKGSDG--HTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 509

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            ++AG  +  AV+ +G +Y++G G    LGHG+ +     R I T  +   +V  VS G 
Sbjct: 510 CVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGS 565

Query: 334 EHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L 
Sbjct: 566 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 625

Query: 393 DTGSVYGFGW---MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            TG VY +G    +G GS            LRP++++ L    V  IS G  H + ++  
Sbjct: 626 STGQVYAWGCGACLGCGS-------SEATALRPKLIEELATTRVVDISIGDSHCLALSHD 678

Query: 450 GRLFGFGDNERAQLGH 465
             ++ +G+N   Q G 
Sbjct: 679 NEVYAWGNNSMGQCGQ 694



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 13/322 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4009 PSFSQAQQVVCGQN-CTFVIQANGTVSACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4066

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4067 TQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4125

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G ++SFG+G    LG G   ++  P  +     +G  V +V+ G  H 
Sbjct: 4126 CGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSAL--EGHQVGQVACGLNHT 4183

Query: 337  VALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4184 LAVSADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4243

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            +VY FG      +G P+ G +    RP+ + +L    +  ++ G  HT+ ++  G ++ +
Sbjct: 4244 NVYTFGQDRL--IGLPE-GRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAW 4300

Query: 456  GDNERAQLGHDTLRGCLEPTEI 477
            G N   QLG        EPT I
Sbjct: 4301 GSNSEGQLGLGHTNHVREPTLI 4322



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V   G+  HGQL   G  +  PT   +AP        Q+  G +    +  NG V + G 
Sbjct: 3984 VFLWGAGRHGQLAEAGRNILVPT---LAP--SFSQAQQVVCGQNCTFVIQANGTVSACGE 4038

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4039 GSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGK 4098

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4099 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGN--T 4156

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLG 464
            S+K L P  + +L  H V Q++ GL HT+ V+  G  ++ FGD +  +LG
Sbjct: 4157 SNKKL-PERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLG 4205



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 15/196 (7%)

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I AG + M++ T    VY +GS S+  L  G Q   LQP+   +F         + AG  
Sbjct: 355 IQAGEAAMVSETCE--VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQY 408

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFV 390
               + S G V   GKG  G LG GD  +++  + L + + H A++  +  +     T  
Sbjct: 409 CTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVSSSKGSDGHTLA 467

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDR 449
               G V+ +G   +G LG    G S     P+++   L+   V  +S G  H+  V++ 
Sbjct: 468 FTSEGEVFSWGDGDYGKLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSED 524

Query: 450 GRLFGFGDNERAQLGH 465
           G L+ +G+ +  +LGH
Sbjct: 525 GELYTWGEGDFGRLGH 540



 Score = 46.2 bits (108), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 19/169 (11%)

Query: 329  VSAGDEHVVALDSSGY----------VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
            VS  DE V++  +S            V+ WG G  G L    E  + +  P  +     A
Sbjct: 3958 VSGMDEQVMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNILVPTLAPSFSQA 4014

Query: 379  VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
             QV   +  TFV+   G+V   G   +G LG   +G SD +    ++ +L+   V+Q+ T
Sbjct: 4015 QQVVCGQNCTFVIQANGTVSACGEGSYGRLG---QGNSDDLHVLTVISALQGFVVTQMVT 4071

Query: 439  GLY---HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
                  H++ +T+ G +F +GD +  +LGH        P +I   + EE
Sbjct: 4072 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE 4120


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 12/331 (3%)

Query: 148  ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR 207
            + T  VSF   ++      V +  S +      Q   V+  G N     G    ++ I  
Sbjct: 2557 QLTTSVSFLASDWEVLQEQVAIQRSTDTPP---QQSAVYVWGLNDKDQLGGLKGSK-IKL 2612

Query: 208  PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
            P   E L  +    +  G      ++  G ++ CG  T+G+LG GD  +   PK+I  L 
Sbjct: 2613 PIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLS 2672

Query: 268  E-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
            + V   V + +G  + LA+T +G V+S+G G +  LGHG      +P+ I+  + K I  
Sbjct: 2673 QFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIR- 2731

Query: 327  VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 384
              ++ G  H  A+ S+G +YTWG G  G LGHGD I +T P+ + +L     VQV   +R
Sbjct: 2732 -DIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSR 2790

Query: 385  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              +T  L   G VY +G   FG LG   RG SD    P  +D L    V Q+  G   ++
Sbjct: 2791 DAQTMALTTDGCVYSWGDGDFGKLG---RGGSDGCYTPLAVDRLNGLGVIQVECGAQFSL 2847

Query: 445  VVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             +T  G ++ +G  +  +LGH       +PT
Sbjct: 2848 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPT 2878



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 151/318 (47%), Gaps = 14/318 (4%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV--VQVSASENHAAFVLQSGQVFTCG 189
            +++CG    G LG G +   C     I F S   +  V V +   HA  + Q G+VF+ G
Sbjct: 2643 LYACGEGTNGRLGLGDDNNVC-EPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWG 2701

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            +      GH +    + +P+L+E LK    + +  G   +  +   G ++T G   +G+L
Sbjct: 2702 EGEDGKLGHGNCIS-LDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 2760

Query: 250  GHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            GHGDT+ +  PK +  L  VG  VVQ+A G   +  +A+T +G VYS+G G    LG G 
Sbjct: 2761 GHGDTITQTRPKLVQAL--VGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG 2818

Query: 307  QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
                  P A+   R  G+ V++V  G +  +AL   G V+TWGKG    LGHG++     
Sbjct: 2819 SDGCYTPLAVD--RLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRK 2876

Query: 367  PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            P  +  L+    + V         + DTG VY +G    G  G    G +    +P ++ 
Sbjct: 2877 PTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQG---NGATSVNRKPSLVH 2933

Query: 427  SLRAHHVSQISTGLYHTV 444
             L    V+++S G  H++
Sbjct: 2934 DLEDARVNRVSCGSSHSI 2951



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 148/320 (46%), Gaps = 17/320 (5%)

Query: 156  TRINFPSAAHV------VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
            ++I  P  + V      + ++        V Q G+++ CG+ ++   G  D N  +  P+
Sbjct: 2608 SKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNN-VCEPK 2666

Query: 210  LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
             +  L     K+V   +G      LT  G V + G    G+LGHG+ +    PK I  L+
Sbjct: 2667 AIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILK 2726

Query: 268  EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
                +  IA G  +  A+  NG +Y++G G    LGHG+   + +P+ +Q     G  VV
Sbjct: 2727 S-KRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQAL--VGQRVV 2783

Query: 328  RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            +V+ G  D   +AL + G VY+WG G  G LG G       P  +  L     +QV    
Sbjct: 2784 QVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGA 2843

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L   G V+ +G   +  LG    G    V +P +++ LR   +  ++ G  H + 
Sbjct: 2844 QFSLALTKYGEVWTWGKGDYFRLG---HGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLA 2900

Query: 446  VTDRGRLFGFGDNERAQLGH 465
            VTD G+++ +GDN+  Q G+
Sbjct: 2901 VTDTGQVYAWGDNDHGQQGN 2920



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 140/314 (44%), Gaps = 27/314 (8%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 176
            G++   L  +  VFS G    G LGHG     C+S  +   I    +  +  ++    H+
Sbjct: 2685 GKHALALTQDGKVFSWGEGEDGKLGHG----NCISLDKPKLIEILKSKRIRDIACGSGHS 2740

Query: 177  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTI 234
            A +  +G+++T G       GH DT     RP+LV+AL G    QV  G     T  LT 
Sbjct: 2741 AAIASNGELYTWGLGEYGRLGHGDTITQT-RPKLVQALVGQRVVQVACGSRDAQTMALTT 2799

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
             G V++ G    G+LG G +    TP ++  L  +G V+Q+  G  + LA+T  G V+++
Sbjct: 2800 DGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLG-VIQVECGAQFSLALTKYGEVWTW 2858

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G  F LGHG  H   +P  ++  R  G  ++ V+ G  H +A+  +G VY WG    G
Sbjct: 2859 GKGDYFRLGHGNDHHVRKPTLVEGLR--GKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 2916

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
              G+G       P  +  L+        AR  +    V  GS +   W+       P  G
Sbjct: 2917 QQGNGATSVNRKPSLVHDLED-------ARVNR----VSCGSSHSIAWVLVDQ---PSNG 2962

Query: 415  VSDKVLRPRILDSL 428
              D V  P + D L
Sbjct: 2963 NQDPVTFPTVRDPL 2976



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 118/232 (50%), Gaps = 4/232 (1%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT  G V++ G+   G+LGHGDT+    PK I  L +  ++V IA G +Y  A++ +G +
Sbjct: 162 LTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLD-KNIVFIACGSTYSAALSASGEL 220

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y++G G+   LGHG   D L P  + T +   +  V   +GD   + + +SG V++WG G
Sbjct: 221 YTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDG 280

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G       P+ +  L     V+V    + +  L   G VY +G      LG  
Sbjct: 281 DYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLG-- 338

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G  + V  P++++SLR   +  +S G  H + +T+   ++G+G N+  Q+
Sbjct: 339 -HGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQI 389



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 126/271 (46%), Gaps = 9/271 (3%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           A   H   + Q G V++ G+      GH DT      P+L+E+L       +  G  ++ 
Sbjct: 154 ADGKHYLALTQDGCVYSWGNGDGGRLGHGDT-VSYDEPKLIESLLDKNIVFIACGSTYSA 212

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 288
            L+  G ++T G   +G+LGHG+  D  TP  +  L+   +VV +A  +G S  L VT +
Sbjct: 213 ALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKG-HTVVHVACGSGDSQTLCVTAS 271

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G+V+S+G G    LG G       P+ +       I+VV+V  G +   AL + G VYTW
Sbjct: 272 GIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLL--DINVVKVFCGGQFSAALTAHGEVYTW 329

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           GKG    LGHG E     P+ + SL+      +         L +   VYG+G   +G +
Sbjct: 330 GKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQI 389

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
              D  +   V  P +  +L +  V  +++G
Sbjct: 390 ---DPTLGPVVSEPTLCPTLSSKTVIGLASG 417



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 20/286 (6%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G+++  L  +  V+S G+   G LGHG +T        I      ++V ++    ++A +
Sbjct: 156 GKHYLALTQDGCVYSWGNGDGGRLGHG-DTVSYDEPKLIESLLDKNIVFIACGSTYSAAL 214

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 237
             SG+++T G  +    GH + +  +  P LV  LKG     V   +G + T  +T  G 
Sbjct: 215 SASGELYTWGRGNYGRLGHGNFDD-VLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGI 273

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V + G   +G+LG G T    TPK +  L ++ +VV++  G  +  A+T +G VY++G G
Sbjct: 274 VFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDI-NVVKVFCGGQFSAALTAHGEVYTWGKG 332

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             + LGHG +     P+ I++ R K I    +S G  H++AL    +VY WG+   G   
Sbjct: 333 DAYRLGHGSEEHVRYPKVIESLRDKKIK--DLSVGTTHILALTEDQFVYGWGRNDYG--- 387

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGFGW 402
              +ID TL   +S         +C     KT + + +G    F W
Sbjct: 388 ---QIDPTLGPVVSE------PTLCPTLSSKTVIGLASGPTQSFAW 424



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 116/244 (47%), Gaps = 10/244 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            V+  G N   QLG   G  +  P    +  L ++  +  IA G   +  V+  G +Y+ G
Sbjct: 2591 VYVWGLNDKDQLGGLKGSKIKLPIYSEV--LSKLKPI-HIAGGSKTLFIVSQEGKLYACG 2647

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+N  LG G+ ++  +P+AI    +  I  V V +G +H +AL   G V++WG+G  G 
Sbjct: 2648 EGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGK 2707

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+ I    P+ +  LKS     +      +  +   G +Y +G   +G LG  D   
Sbjct: 2708 LGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGD--- 2764

Query: 416  SDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            +    RP+++ +L    V Q++ G     T+ +T  G ++ +GD +  +LG     GC  
Sbjct: 2765 TITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYT 2824

Query: 474  PTEI 477
            P  +
Sbjct: 2825 PLAV 2828



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 16/218 (7%)

Query: 259 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 318
           TP    P+  +G + Q+      ++ ++ NG  Y+   GS          +   P  +  
Sbjct: 93  TPFYCDPIAGLG-IKQLCCTERSLMILSLNGNAYNMYHGS----------ETQYPLRVHG 141

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
           F  K I ++   A  +H +AL   G VY+WG G  G LGHGD +    P+ + SL     
Sbjct: 142 FSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNI 201

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS- 437
           V +      +  L  +G +Y +G   +G LG    G  D VL P ++ +L+ H V  ++ 
Sbjct: 202 VFIACGSTYSAALSASGELYTWGRGNYGRLG---HGNFDDVLTPTLVTTLKGHTVVHVAC 258

Query: 438 -TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +G   T+ VT  G +F +GD +  +LG     G   P
Sbjct: 259 GSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTP 296



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 9/108 (8%)

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
           +P++ + SH      A  +    L   G VY +G    G LG  D    D+   P++++S
Sbjct: 145 KPITMIASH------ADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDE---PKLIES 195

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           L   ++  I+ G  ++  ++  G L+ +G     +LGH      L PT
Sbjct: 196 LLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPT 243



 Score = 38.9 bits (89), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 33/69 (47%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            ++  ++ D SG +Y WG  + G LG  +     LP P  SL +   +Q+   ++  F + 
Sbjct: 3560 EDWTLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT 3619

Query: 393  DTGSVYGFG 401
              G VY  G
Sbjct: 3620 ADGKVYSTG 3628


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 151/324 (46%), Gaps = 22/324 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HA+ V +SG+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T  G ++T G  TH  G LGHG  +    P+ I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWHTA 197

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--- 340
            +T  G +++FG GS   LGHG       PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESL--SGLKTIAVACGVWHTAAIVEVI 255

Query: 341 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L 
Sbjct: 256 VTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYDFYRVACGHSLTVGLT 315

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGR 451
            +G V+  G   +G LG P+   SD   RP ++ D +   HV Q++ G YH  V+T R  
Sbjct: 316 TSGKVWTMGNSVYGQLGNPN---SDG--RPCLVGDKITNEHVLQVACGSYHVSVLTSRSE 370

Query: 452 LFGFGDNERAQLGHDTLRGCLEPT 475
           +F +G     +LGH  +     PT
Sbjct: 371 VFTWGKGANGRLGHGDIEDQKVPT 394



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 22/285 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ A   +  +  G +HT  ++ +     +  G+   G+LGHG +    +        
Sbjct: 122 LVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGAL 181

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               V  VS    H A +   GQ+FT GD S    GH +  + I  PR VE+L G+    
Sbjct: 182 EGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNV-KSISCPREVESLSGLKTIA 240

Query: 222 VTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           V  G+  T  +              G + T G     +LGHGD   R  P  +A L +  
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDY- 299

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRV 329
              ++A G S  + +T +G V++ G   N   G  G  + + +P  +   +    HV++V
Sbjct: 300 DFYRVACGHSLTVGLTTSGKVWTMG---NSVYGQLGNPNSDGRP-CLVGDKITNEHVLQV 355

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           + G  HV  L S   V+TWGKG  G LGHGD  D+ +P  + +LK
Sbjct: 356 ACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALK 400



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T K+      PLE   V  V  +  G  +   VT +G V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGT 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 365 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P  +S     L V  V      T ++   G ++ FG   FG LG    G    +  PR
Sbjct: 172 WIPRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGH---GNVKSISCPR 228

Query: 424 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 473 EPT 475
            PT
Sbjct: 289 NPT 291



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 20/280 (7%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGALEGLQ 185

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 375
           V  VS G  H   + S G ++T+G G  G LGHG+    + P   E LS LK+       
Sbjct: 186 VAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGV 245

Query: 376 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
            H A  V     ++   V  G ++ +G      LG  D+   +  L P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLNPTCVASLIDYDFY 302

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CL 472
           +++ G   TV +T  G+++  G++   QLG+    G  CL
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCL 342



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 18/221 (8%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           ++ G +HT LI++   +F+ G    GVLGHG    + +S  R +   S    + V+    
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHG--NVKSISCPREVESLSGLKTIAVACGVW 246

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A +++           +G++FT GD      GH D       P  V +L      +V 
Sbjct: 247 HTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGD-KEARLNPTCVASLIDYDFYRVA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+Q+A G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVGDKITNE--HVLQVACGSYHVS 363

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            +T    V+++G G+N  LGHG+  D+  P  ++  + + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSV 404



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 2/155 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  V  G  H   +  SG V+TWG+   G LGHG   D   P  + SL +     V  
Sbjct: 77  LDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYH 442
            +  T  +  TG +Y +G  G  ++G    G       PR I  +L    V+ +S G +H
Sbjct: 137 GEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTWH 195

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T ++T  G+LF FGD     LGH  ++    P E+
Sbjct: 196 TALITSMGQLFTFGDGSFGVLGHGNVKSISCPREV 230



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 340 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +  +G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRSGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 451 RLFGFGD--NERAQLGHDTLRGCLEPTEI 477
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 160/352 (45%), Gaps = 20/352 (5%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           M+I  G  H+L ++   +V++ G +  G LG    + Q +S  R+  P    +V V + +
Sbjct: 69  MRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARL--PVLEDIVSVVSGD 126

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +   G V+T G NSS   G   T      P+ VE    V    V AG   +  L 
Sbjct: 127 AHSLALGADGTVWTWGSNSSGQLGD-GTTTDRAEPQRVEGFTDVVA--VAAGDFHSLVLK 183

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G+N HGQLG G T     PK +  LE    VV +AAG  + LAV  +G V S
Sbjct: 184 SDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLE---GVVALAAGFDFTLAVHADGAVSS 240

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+ S   LG G     L P  I T       +  V+AG  H VAL   G V+TWG    
Sbjct: 241 WGANSFGQLGLGTFTQRLSPERIPTLS----GITSVAAGTYHAVALGKDGTVWTWGSNSS 296

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G   D+ +P PL  +    A  V +    +  L++ G V  +G    G LG  D 
Sbjct: 297 GQLGDGTWNDRAVPAPLPGVGG--ARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGD- 353

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             +D+   P ++  L A  V+ +  G  H + +   G L+ +G     QLGH
Sbjct: 354 -TADRST-PSLVPELSA--VTAVVGGAQHALALRKDGTLWAWGGGLAGQLGH 401



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 169/366 (46%), Gaps = 22/366 (6%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
            ++  GR H LL+ ++ SV + G++  G LG G  TT       +   S A    V++   
Sbjct: 771  RLAAGRAHALLVRADGSVVAWGANASGQLGDG-GTTHGARAVTVRGVSCAR--SVASGGQ 827

Query: 175  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
            H+  +   G V+T G+N     G   T+  +  P  VE L+G+    V  G + +  L  
Sbjct: 828  HSLVLACDGTVWTWGENQRGQLGDGTTSARVA-PGRVEGLEGIVA--VAGGGDTSLALRS 884

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
             G V   G+N  GQ+G G   DR TP+ I  L +V   + IA G S+ LAV  +G V+++
Sbjct: 885  DGTVWAWGANASGQVGDGTVEDRLTPRRIEALSDV---MVIALGESHALAVGEDGTVWAW 941

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV-RVSAGDEHVVALDSSGYVYTWGKGYC 353
            G+ ++  LG G +   L P      R KG+  V  V+AG    +A+   G  + WG    
Sbjct: 942  GANASGQLGDGGETPSLLP-----ARVKGLEGVGSVAAGRAFSLAVRDDGTAWAWGANES 996

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            G LG G    + +P  ++S+K   AV   A       L + G+V+ +G    G LG  D 
Sbjct: 997  GQLGDGSNQSRRVPHRVASVKGLRAVSAGAHH--AMALGEDGAVWAWGDNTLGQLG--DG 1052

Query: 414  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
              +  V+ P+ +  L    V  ++ G   +V V   G  F +G NE  QLG       L 
Sbjct: 1053 TSAFTVMWPQRVAEL--SDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLS 1110

Query: 474  PTEIFI 479
            P E+ I
Sbjct: 1111 PAEVKI 1116



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 161/369 (43%), Gaps = 18/369 (4%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            M I  G  H L +  + +V++ G++  G LG G ET    S           V  V+A  
Sbjct: 920  MVIALGESHALAVGEDGTVWAWGANASGQLGDGGETP---SLLPARVKGLEGVGSVAAGR 976

Query: 174  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
              +  V   G  +  G N S   G   +N+    P  V ++KG+  + V+AG +    L 
Sbjct: 977  AFSLAVRDDGTAWAWGANESGQLGD-GSNQSRRVPHRVASVKGL--RAVSAGAHHAMALG 1033

Query: 234  IRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   G NT GQLG G +      P+ +A L +V SV   AAG  + +AV  +G  +
Sbjct: 1034 EDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVESV---AAGEQFSVAVAHDGTAF 1090

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            S+GS     LG G+    L P  ++    K   VV V A  +H VAL + G +  WG   
Sbjct: 1091 SWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNA 1150

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LG G    ++ P  +  +    AV   A    +  L   G+V+ +G  GFG LG   
Sbjct: 1151 TGQLGDGTTTRRSSPGEIRGVTRVTAVSTGA--WHSLALRLDGTVWAWGANGFGQLG--- 1205

Query: 413  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
             G +     P  +  LR   V  I+ G YH+V V   G ++ +G N   QLG  T     
Sbjct: 1206 DGTTTARAVPVPVQGLR--DVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRA 1263

Query: 473  EPTEIFIQE 481
             P ++   E
Sbjct: 1264 LPVQVHKLE 1272



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 131/270 (48%), Gaps = 18/270 (6%)

Query: 209 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLE 267
           RL E L   P + + AG   + FLT  G V   G N+ GQLG  DT   R +P  +  LE
Sbjct: 61  RLAEPLS--PMR-IAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVLE 117

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           ++ SVV   +G ++ LA+  +G V+++GS S+  LG G   D  +P+ ++ F      VV
Sbjct: 118 DIVSVV---SGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGF----TDVV 170

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            V+AGD H + L S G V+ WG  + G LG G       P+P+  L+    V + A    
Sbjct: 171 AVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEG--VVALAAGFDF 228

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T  +   G+V  +G   FG LG    G   + L P  + +L    ++ ++ G YH V + 
Sbjct: 229 TLAVHADGAVSSWGANSFGQLGL---GTFTQRLSPERIPTLSG--ITSVAAGTYHAVALG 283

Query: 448 DRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             G ++ +G N   QLG  T      P  +
Sbjct: 284 KDGTVWTWGSNSSGQLGDGTWNDRAVPAPL 313



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 192/473 (40%), Gaps = 90/473 (19%)

Query: 50  PQKFRSLVDLAASQLCALHS--------IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSV 100
           PQ+     D+ A      HS        ++A G + + Q+   +   G W + +  L+ V
Sbjct: 160 PQRVEGFTDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGV 219

Query: 101 EHSSDIVETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 159
                         + +  G   TL + ++ +V S G++  G LG G   TQ +S  RI 
Sbjct: 220 --------------VALAAGFDFTLAVHADGAVSSWGANSFGQLGLG-TFTQRLSPERI- 263

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVP 218
            P+ + +  V+A   HA  + + G V+T G NSS   G    N R +  P     L GV 
Sbjct: 264 -PTLSGITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAP-----LPGVG 317

Query: 219 CKQVTAGLNFTGFLTIRG-HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
             +  A L+      + G  V   G+N  GQLG GDT DR TP S+ P  E+ +V  +  
Sbjct: 318 GARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTP-SLVP--ELSAVTAVVG 374

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF------------------ 319
           G  + LA+  +G ++++G G    LGHG     + P  +                     
Sbjct: 375 GAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTSMATGSFHSLAALE 434

Query: 320 ---------------------------RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKG 351
                                      R  G+  VR V+A   H +A+   G V+TWG+ 
Sbjct: 435 DGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRAVAAAGHHSIAVAMDGTVWTWGRN 494

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G   D+  P  +S L S LA  + A       L   G V+ +G+   G LG  
Sbjct: 495 AAGQLGDGTTRDRARPVAVSGLTSVLA--IAAGGSHVLALRSDGDVWAWGYNALGQLG-- 550

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             G S   L P  +  L    +  ++ G Y ++ + + G ++ +G+    QLG
Sbjct: 551 -DGTSGDKLTPVRVPGLAP--IQSVAAGTYFSMALANDGTVWTWGEGFEGQLG 600



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 136/311 (43%), Gaps = 35/311 (11%)

Query: 166  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC-KQVTA 224
            V +++A   HA  V   G V   G N+S   G   T       R V  ++GV C + V +
Sbjct: 769  VERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGA---RAVT-VRGVSCARSVAS 824

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            G   +  L   G V T G N  GQLG G T  R  P  +  LE    +V +A G    LA
Sbjct: 825  GGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLE---GIVAVAGGGDTSLA 881

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +  +G V+++G+ ++  +G G   D L PR I+        V+ ++ G+ H +A+   G 
Sbjct: 882  LRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEALS----DVMVIALGESHALAVGEDGT 937

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            V+ WG    G LG G E    LP  +  L+      V A +  +  + D G+ + +G   
Sbjct: 938  VWAWGANASGQLGDGGETPSLLPARVKGLEG--VGSVAAGRAFSLAVRDDGTAWAWGANE 995

Query: 405  FGSLG--------FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
             G LG         P R  S K LR              +S G +H + + + G ++ +G
Sbjct: 996  SGQLGDGSNQSRRVPHRVASVKGLR-------------AVSAGAHHAMALGEDGAVWAWG 1042

Query: 457  DNERAQLGHDT 467
            DN   QLG  T
Sbjct: 1043 DNTLGQLGDGT 1053



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 169/364 (46%), Gaps = 25/364 (6%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H L L  + ++++ G  L G LGHG      V  T +      +V  ++    H
Sbjct: 372 VVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGL---TNVTSMATGSFH 428

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           +   L+ G V+  G NS    G    T R +  P  V  L  V  + V A  + +  + +
Sbjct: 429 SLAALEDGSVWAWGRNSYGQLGDGTVTERHV--PVRVPGLPSV--RAVAAAGHHSIAVAM 484

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V T G N  GQLG G T DR  P +++ L    SV+ IAAG S++LA+  +G V+++
Sbjct: 485 DGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLT---SVLAIAAGGSHVLALRSDGDVWAW 541

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 353
           G  +   LG G   D+L P      R  G+  ++ V+AG    +AL + G V+TWG+G+ 
Sbjct: 542 GYNALGQLGDGTSGDKLTP-----VRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFE 596

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G  + +  P  +  L     + V +       +   G+V+ +G    G LG  D 
Sbjct: 597 GQLGDGGGVQRLSPVAVKGLSDIRNISVGS--AHALAVRGDGTVWAWGDNNEGQLG--DG 652

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
              D+   P  + +L    ++ +S G  H++ +   G +  +G N   QLG  TL   + 
Sbjct: 653 SWMDR-FAPVQVRNLTG--ITAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVL 709

Query: 474 PTEI 477
           P+ I
Sbjct: 710 PSVI 713



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 161/402 (40%), Gaps = 69/402 (17%)

Query: 113 NQMQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N   + TG +H+L  + + SV++ G +  G LG G  T + V       PS   V  V+A
Sbjct: 418 NVTSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPS---VRAVAA 474

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPI----------------------- 205
           + +H+  V   G V+T G N++   G    RD  RP+                       
Sbjct: 475 AGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTSVLAIAAGGSHVLALRS 534

Query: 206 -----------------------FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
                                    P  V  L   P + V AG  F+  L   G V T G
Sbjct: 535 DGDVWAWGYNALGQLGDGTSGDKLTPVRVPGL--APIQSVAAGTYFSMALANDGTVWTWG 592

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
               GQLG G  + R +P ++  L ++     I+ G ++ LAV G+G V+++G  +   L
Sbjct: 593 EGFEGQLGDGGGVQRLSPVAVKGLSDI---RNISVGSAHALAVRGDGTVWAWGDNNEGQL 649

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           G G   D   P  +Q     GI    VS G  H +AL + G V  WG    G LG G   
Sbjct: 650 GDGSWMDRFAP--VQVRNLTGI--TAVSGGRSHSLALHADGTVRAWGSNGYGQLGDGTLT 705

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            + LP  +  L    A+           L    ++ G+G+  FG LG    G S + ++ 
Sbjct: 706 SRVLPSVIPGLSGIQALHPG--HLHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQV 763

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           R +       V +++ G  H ++V   G +  +G N   QLG
Sbjct: 764 RGIG-----RVERLAAGRAHALLVRADGSVVAWGANASGQLG 800



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 148/351 (42%), Gaps = 20/351 (5%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            ++ G +H + L  + +V++ G +  G LG G      +   R+   S   V  V+A E  
Sbjct: 1022 VSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELS--DVESVAAGEQF 1079

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFLT 233
            +  V   G  F+ G N     G   T  P   P  V+    K      V A       L 
Sbjct: 1080 SVAVAHDGTAFSWGSNEYGQLGDGKTG-PRLSPAEVKIGGSKARTVVTVGAWGQHAVALM 1138

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G +   G N  GQLG G T  R +P  I     V  V  ++ G  + LA+  +G V++
Sbjct: 1139 ADGTLQAWGDNATGQLGDGTTTRRSSPGEI---RGVTRVTAVSTGAWHSLALRLDGTVWA 1195

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            +G+     LG G       P  +Q  R     VV ++AG  H VA+ S G V+TWG    
Sbjct: 1196 WGANGFGQLGDGTTTARAVPVPVQGLR----DVVAIAAGGYHSVAVRSDGTVWTWGYNTF 1251

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            G LG G    + LP  +  L+   A  V      +  L   G+V G+G    G LG   R
Sbjct: 1252 GQLGDGTSESRALPVQVHKLEGVQA--VTGGDHHSLALHADGTVSGWGHNASGQLGDGSR 1309

Query: 414  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              +D+    R+ D      ++++  G  HTV +   G ++ +GDN   QLG
Sbjct: 1310 --TDRYTPVRLKD---VDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLG 1355



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 183/486 (37%), Gaps = 79/486 (16%)

Query: 50   PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRC----NGNWKRVLRFLQSVEHSSD 105
            P +  S+  L A    A H++  G    V     N      +G     + + Q V   SD
Sbjct: 1010 PHRVASVKGLRAVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSD 1069

Query: 106  IVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSAA 164
            +   +AG Q  +        +  + + FS GS+  G LG G    +   +  +I    A 
Sbjct: 1070 VESVAAGEQFSVA-------VAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKAR 1122

Query: 165  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVT 223
             VV V A   HA  ++  G +   GDN++   G   T R   R    E ++GV     V+
Sbjct: 1123 TVVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTR---RSSPGE-IRGVTRVTAVS 1178

Query: 224  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
             G   +  L + G V   G+N  GQLG G T  R  P    P++ +  VV IAAG  + +
Sbjct: 1179 TGAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVP---VPVQGLRDVVAIAAGGYHSV 1235

Query: 284  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV---------------- 327
            AV  +G V+++G  +   LG G       P  +Q  + +G+  V                
Sbjct: 1236 AVRSDGTVWTWGYNTFGQLGDGTSESRALP--VQVHKLEGVQAVTGGDHHSLALHADGTV 1293

Query: 328  --------------------------------RVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                                             V AG  H VAL   G V+TWG    G 
Sbjct: 1294 SGWGHNASGQLGDGSRTDRYTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQ 1353

Query: 356  LGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LG G      + +P+P+S L +  A  + A    +F        + +G    G LG  D 
Sbjct: 1354 LGDGVTGPRMRLVPKPVSGLPA--ATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDN 1411

Query: 414  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                +  R ++L  L+      I+ G   ++ +T  G L  +G +    LG   L     
Sbjct: 1412 APRAEPQRMKLLSGLKV-----IAGGADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRAS 1466

Query: 474  PTEIFI 479
            P  + +
Sbjct: 1467 PGRVLL 1472



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 9/166 (5%)

Query: 314 RAIQTFR-RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLS 371
           RA Q  R  + +  +R++AG +H + L  +G V+ WG    G LG  D    +  P  L 
Sbjct: 55  RAAQAIRLAEPLSPMRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLP 114

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
            L+    V V +    +  L   G+V+ +G    G LG  D   +D+   P+ ++     
Sbjct: 115 VLED--IVSVVSGDAHSLALGADGTVWTWGSNSSGQLG--DGTTTDRA-EPQRVEGFT-- 167

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            V  ++ G +H++V+   G ++ +G N   QLG    +  L P  +
Sbjct: 168 DVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPV 213


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 149/314 (47%), Gaps = 21/314 (6%)

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGF 231
           EN     L+  ++   G  S    G   T +PI   PR    +     K+V  G N + F
Sbjct: 48  ENKLDDFLKGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIF 107

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVT 286
           L   G V+TCG NT GQLGH     +P        E++G+     ++ +A G S+ LA++
Sbjct: 108 LLEDGEVYTCGVNTKGQLGHEKEGSKP--------EQIGALADQHIIHVACGESHSLALS 159

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             G ++S+G+GS+  LG     D +  PR I+   ++ I  ++VS G+ H +AL + G  
Sbjct: 160 DQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMI--LQVSCGNWHCLALAADGQF 217

Query: 346 YTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           + WG+   G LG G E   +  P+ + SL      QV A    +F L  +G+V+G+G   
Sbjct: 218 FAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNT 277

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG  D    +    P  +  LR   V  IS G  HT V+T  G +F FG     QLG
Sbjct: 278 SGQLGLSDEQDRES---PCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLG 334

Query: 465 HDTLRGCLEPTEIF 478
           HD+    + P  + 
Sbjct: 335 HDSFNDEVNPRRVL 348



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 155/316 (49%), Gaps = 14/316 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V +V+   NH+ F+L+ G+V+TCG N+    GH        +P  + AL       V  G
Sbjct: 95  VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGS---KPEQIGALADQHIIHVACG 151

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            + +  L+ +G + + G+ + GQLG   T D    P+ I  L +   ++Q++ G  + LA
Sbjct: 152 ESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQ-EMILQVSCGNWHCLA 210

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           +  +G  +++G  S+  LG G++   +  P+ +++    GI + +V+AG  H  AL  SG
Sbjct: 211 LAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSL--DGIPLAQVAAGGAHSFALSLSG 268

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            V+ WGK   G LG  DE D+  P  +  L++   V +      T VL  TG V+ FG  
Sbjct: 269 AVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAG 328

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQ 462
             G LG      +D+V  PR +  L    VSQI+ G  HT+  V   G ++ FG   + Q
Sbjct: 329 SCGQLG--HDSFNDEV-NPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQ 385

Query: 463 L--GHDTLRGCLEPTE 476
           L  GH     C  P +
Sbjct: 386 LGSGHTCNLKCPSPVK 401



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E ++     +I   +  H++ V+  E+H+  +
Sbjct: 102 GNHSIFLLEDGEVYTCGVNTKGQLGHEKEGSKP---EQIGALADQHIIHVACGESHSLAL 158

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              G++F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 159 SDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFF 218

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
             G N+HGQLG G     + +P+ +  L+ +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 219 AWGQNSHGQLGLGKEFPSQASPQRVKSLDGI-PLAQVAAGGAHSFALSLSGAVFGWGKNT 277

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
           +  LG  ++ D   P  ++  R +   VV +S G +H   L  +G V+T+G G CG LGH
Sbjct: 278 SGQLGLSDEQDRESPCHVKLLRTQ--KVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGH 335

Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               D+  P  +  L      Q+ C R+     +  +G +Y FG    G LG
Sbjct: 336 DSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLG 387



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 127/267 (47%), Gaps = 10/267 (3%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G  H+L +S+   +FS G+   G LG    T   V+  R I   +   ++QVS  
Sbjct: 146 IHVACGESHSLALSDQGRLFSWGAGSDGQLGLT-TTEDSVAVPRLIKKLNQEMILQVSCG 204

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +   GQ F  G NS    G          P+ V++L G+P  QV AG   +  L
Sbjct: 205 NWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFAL 264

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           ++ G V   G NT GQLG  D  DR +P  +  L     VV I+ G  +   +T  G V+
Sbjct: 265 SLSGAVFGWGKNTSGQLGLSDEQDRESPCHVK-LLRTQKVVYISCGSDHTAVLTKTGGVF 323

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
           +FG+GS   LGH   +DE+ PR +      G  V +++ G +H +A + SSG +Y +G G
Sbjct: 324 TFGAGSCGQLGHDSFNDEVNPRRV--LELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCG 381

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLA 378
             G LG G   +   P P   +K H A
Sbjct: 382 IKGQLGSGHTCNLKCPSP---VKGHWA 405


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 167/339 (49%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4036 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4094

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4095 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4153

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4154 VTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSTDG 4210

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4211 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4268

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  +  TG VY +G    G L
Sbjct: 4269 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQL 4328

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4329 GL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4364



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLVEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4029 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4086

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4087 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4145

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4146 CGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4203

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4204 LAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4263

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +T  G ++ +
Sbjct: 4264 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAW 4320

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT I +
Sbjct: 4321 GSNSEGQLGLGHTNHVREPTLITV 4344



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ ++        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLVEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVAIQQISA 725



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P     A         Q+  G +    +  NG V + G 
Sbjct: 4004 VYLWGAGRHGQLAEAGRNVMIP-----AGAPSFSQAQQVICGQNCTFVIQANGTVLACGE 4058

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4059 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4118

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4119 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGN--T 4176

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V TD   ++ FGD +  +LG
Sbjct: 4177 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 4225



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    +   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 726



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P  +     A QV   +  TFV+   G+V   G   
Sbjct: 4004 VYLWGAGRHGQLA---EAGRNVMIPAGAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4060

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4061 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4117

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4118 KLGHGNSDRQRRPRQIEALQGEE 4140


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 168/357 (47%), Gaps = 19/357 (5%)

Query: 126 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + + + ++  G++  G LG G  E  Q ++ +++ +   + + QV+    H  F+  SG+
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+ CG N     GH   + P  RP L+  L      Q+  G   +  L+  G V + G N
Sbjct: 61  VYACGSNDHSQLGH---DLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDN 117

Query: 245 THGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
             GQLG     D    PK +  L    +VVQIA G ++ LA+T  G +YS+GS     LG
Sbjct: 118 DCGQLGQATDQDIVQLPKIVRQLVS-KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLG 176

Query: 304 ---HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
                E     QP  + T    GI V  ++ G  H   +  S  V+ WG+  CG LG  D
Sbjct: 177 VNTPKEVTHSNQPVRLTTLL--GIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLND 234

Query: 361 EIDKTLPEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           E  ++ P  L +L++ L V+   C  +   F L + G V+  G   +G LG    G    
Sbjct: 235 ETSRSYPTQLKTLRT-LGVRFVACGDEFSVF-LTNEGGVFTCGAGAYGQLG---HGFGAN 289

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            + PR++  L    ++Q++ G  HT+ +V  RGR++GFG     QLG  + +    P
Sbjct: 290 EMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRSTKSLTLP 346



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 139/306 (45%), Gaps = 25/306 (8%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  HTL +++S  V++CGS+    LGH   T + +    +       VVQ++    
Sbjct: 44  QVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTKRPLLIPEL---LDYVVVQIACGSR 100

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  + + GQV + GDN     G       +  P++V  L      Q+  G N +  LT 
Sbjct: 101 HSMALSEWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTS 160

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIA----PLEEVG----SVVQIAAGPSYMLAVT 286
            G +++ GSN +GQLG        TPK +     P+         V  IA G ++   ++
Sbjct: 161 CGELYSWGSNIYGQLGVN------TPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIIS 214

Query: 287 GNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +  V  FG G N C  LG  ++     P  ++T R  G+    V+ GDE  V L + G 
Sbjct: 215 KSSAV--FGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGG 270

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWM 403
           V+T G G  G LGHG   ++ LP  +  L      QV    R T  LV + G VYGFG  
Sbjct: 271 VFTCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLG 330

Query: 404 GFGSLG 409
             G LG
Sbjct: 331 SSGQLG 336



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 112/249 (44%), Gaps = 8/249 (3%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
           +T    ++  G+ +HGQLG G   D    TP  + P     ++ Q+A G  + L +T +G
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQV-PWTPDSAIKQVACGHRHTLFLTSSG 59

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VY+ GS  +  LGH    D    R +         VV+++ G  H +AL   G V +WG
Sbjct: 60  RVYACGSNDHSQLGH----DLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWG 115

Query: 350 KGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
              CG LG   + D   LP+ +  L S   VQ+      +  L   G +Y +G   +G L
Sbjct: 116 DNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 175

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
           G           +P  L +L    V+ I+ G  H+ +++    +FG+G N   QLG +  
Sbjct: 176 GVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDE 235

Query: 469 RGCLEPTEI 477
                PT++
Sbjct: 236 TSRSYPTQL 244



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 4/149 (2%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H+ +IS SS VF  G + CG LG   ET++    T++       V  V+  +  
Sbjct: 203 IACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRSYP-TQLKTLRTLGVRFVACGDEF 261

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 234
           + F+   G VFTCG  +    GH      +  PR+V  L G    QV  G   T   +  
Sbjct: 262 SVFLTNEGGVFTCGAGAYGQLGHGFGANEML-PRMVMELMGSTITQVACGNRHTLALVPS 320

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           RG V+  G  + GQLG   T     P+ +
Sbjct: 321 RGRVYGFGLGSSGQLGTRSTKSLTLPQVV 349


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 148/312 (47%), Gaps = 19/312 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGXLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 367

Query: 226 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 368 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 427

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 339
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 428 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 485

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQV   +  T  L 
Sbjct: 486 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLT 545

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
             G+VY  G    G LG P     DK +   +   L+   V +IS+G YH   +T +G L
Sbjct: 546 CLGTVYTMGSAVHGQLGNPQ--AKDKSI-AIVGGKLKDEFVKEISSGSYHVAALTSKGSL 602

Query: 453 FGFGDNERAQLG 464
           + +G     QLG
Sbjct: 603 YTWGMGANGQLG 614



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 139/285 (48%), Gaps = 21/285 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFP 161
           IVE+  G  ++ ++ G Y T  +++S  +++ G +  G+  +G   + +Q +  +R++ P
Sbjct: 352 IVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIP-SRLSGP 410

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
            +   +  V+  E H A V  SGQ+FT GD +    GH      I +P+ VE+L G+  K
Sbjct: 411 LNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLES-ISQPKEVESLSGLWVK 469

Query: 221 QVTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
               G   T            F T  G + T G    G+LGHGD   +  P  +A L + 
Sbjct: 470 AAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVD- 528

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
              VQ++ G    + +T  G VY+ GS  +  LG+ +  D  +  AI   + K   V  +
Sbjct: 529 HDFVQVSCGRMLTVGLTCLGTVYTMGSAVHGQLGNPQAKD--KSIAIVGGKLKDEFVKEI 586

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S+G  HV AL S G +YTWG G  G LG GD  D+  P  + +L+
Sbjct: 587 SSGSYHVAALTSKGSLYTWGMGANGQLGLGDTEDRNSPAVVEALR 631



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY FG+       +G Q D L P+ +++     + V  +S G +H   +   G V+ WG+
Sbjct: 282 VYRFGNQ------NGMQSDALLPKLLESTTM--LDVREISLGGKHAALVTKHGEVFCWGE 333

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G  G LGH   +D   P+ + SL   L   V   + +T  L  +G +Y +G  G G    
Sbjct: 334 GSGGXLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLV 393

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
            +R    + +  R+   L    +S ++ G +H  +V+  G+LF +GD     LGH  L  
Sbjct: 394 GERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLES 453

Query: 471 CLEPTEI 477
             +P E+
Sbjct: 454 ISQPKEV 460



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 19/218 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V +I+ G  +   VT +G V+ +G GS   LGH    D   P+ +++    G+ V  VS 
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESL--TGVLVKSVSC 366

Query: 332 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           G+    AL  SG +YTWG    G   +G   +  + +P  LS   +  ++   A      
Sbjct: 367 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 426

Query: 390 VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 446
            +V T G ++ +G   FG LG    G  + + +P+ ++SL    V   + G +HT  +  
Sbjct: 427 AIVSTSGQLFTYGDGTFGVLG---HGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVE 483

Query: 447 ---------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
                    T  G+LF +GD ++ +LGH      L PT
Sbjct: 484 VRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 521


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3968 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4026

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4027 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4085

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4086 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSVDG 4142

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4143 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4200

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4201 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4260

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4261 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4296



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3961 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4018

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4019 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4077

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4078 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4135

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4136 LAVSVDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4195

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4196 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4252

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4253 GSNSEGQLGLGHTNHVREPT 4272



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3936 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3990

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3991 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4050

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4051 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4108

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+ D   ++ FGD +  +LG
Sbjct: 4109 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLG 4157



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3936 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3992

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3993 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4049

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4050 KLGHGNSDRQRRPRQIEALQGEE 4072


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 23/326 (7%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +H A V + G++FT G++S    GH   ++   +PRLV++L       V  G   T  ++
Sbjct: 273 SHIALVTRQGEIFTWGEDSGGRLGH-GFDKDYGKPRLVDSLAITSVSFVACGEYHTCAVS 331

Query: 234 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           I G ++T G  TH  G LGHG  +    PK +    E   VV IA G  +   +T NG +
Sbjct: 332 ISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSNGKL 391

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 339
           ++FG G+   LGHG++     P+ +Q     G   V+V+ G  H  A+            
Sbjct: 392 FTFGDGTLGVLGHGDRESVAYPKELQLL--SGHKAVKVACGVWHTAAIIEVNDQSGSSSN 449

Query: 340 -DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
             SS  ++TWG G    LGH ++     P  +++L  +  +QV      T  L  +G V+
Sbjct: 450 TSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHSLTVALTASGHVF 509

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             G   +G LG P    SD  +   + D L+   V +IS G +H  V+T R  L+ +G  
Sbjct: 510 TMGSKAYGQLGNP---TSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRG 566

Query: 459 ERAQLGHDTLRGCLEPTEIFIQEMEE 484
              +LGH  +    + T I ++ ++E
Sbjct: 567 ANGRLGHGDIED--QKTPILVEALKE 590



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 21/233 (9%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + I  G +HT LI SN  +F+ G    GVLGHG    + V++ + +   S    V+V+  
Sbjct: 373 VSIACGAWHTALITSNGKLFTFGDGTLGVLGHG--DRESVAYPKELQLLSGHKAVKVACG 430

Query: 173 ENHAAFVLQ-------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
             H A +++             S ++FT GD   +  GH +      +P  V AL     
Sbjct: 431 VWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHAN-KETYLQPTCVAALADYNF 489

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            QV  G + T  LT  GHV T GS  +GQLG+  T D   P  +    +  +V +I+ G 
Sbjct: 490 LQVACGHSLTVALTASGHVFTMGSKAYGQLGN-PTSDGKVPILVRDKLQGETVEEISCGT 548

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            ++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  HV  ++ G
Sbjct: 549 HHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKER--HVKNIACG 599



 Score = 38.9 bits (89), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 9/130 (6%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N +Q+  G   T+ ++ S  VF+ GS   G LG+     +     R        V ++S 
Sbjct: 488 NFLQVACGHSLTVALTASGHVFTMGSKAYGQLGNPTSDGKVPILVRDKL-QGETVEEISC 546

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
             +H A +    +++T G  ++   GH    D   PI    LVEALK    K +  G NF
Sbjct: 547 GTHHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPI----LVEALKERHVKNIACGANF 602

Query: 229 TGFLTIRGHV 238
           T  + I   V
Sbjct: 603 TTCICIHKWV 612


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H  FVL  G V+TCG N     GH    +   RP  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALND 101

Query: 235 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           +G V+  G  T GQLG   T +    P++I  L E+  +VQ+A G  + LA++    V+S
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFS 160

Query: 294 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +G      LG G E   +  P  I++    GI   +++AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG  D+ D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 467
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE-- 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P  + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRTQKVVHICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 7/261 (2%)

Query: 110 SAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVV 167
            A N + ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +V
Sbjct: 82  DAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIV 140

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           QV+    H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  LT+ G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T 
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTK 259

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVY 346
            G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIY 317

Query: 347 TWGKGYCGALGHGDEIDKTLP 367
           ++G G  G LG G   ++  P
Sbjct: 318 SFGLGGNGQLGTGTTSNRKSP 338



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   L  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 291
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ 317
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
 gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
          Length = 1280

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 173/377 (45%), Gaps = 25/377 (6%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +I  G YHT  L+S+  V+S G    G LG G   T+       N     HV+ + +   
Sbjct: 37  KIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNL---NHVIDIHSGVR 93

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 233
            +  + Q G V+T G N +   G   T   +  P  V  L G+  K ++ GL + G  L+
Sbjct: 94  SSMALRQDGTVWTWGANENGQLG-IGTITNVNAPAQVPGLSGI--KAISGGLAYHGMALS 150

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V T G N +G+LG+G T+ + +P  +A L +V     IAAG  Y LA+  +G V++
Sbjct: 151 ENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSDV---TAIAAGGYYSLALKSDGTVWA 207

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G   +  LG G   D   P  +         V+ ++AG  H +A+   G V+ WG    
Sbjct: 208 WGVNGSGELGDGTTTDRHVPVQVAGL----TDVMAIAAGGSHSLAIKQDGTVWAWGNNTY 263

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G    +T P  + +L+ H+ V V      +  +   G+V+ +G      LG    
Sbjct: 264 GTLGDGTRTHRTRPVQVRNLQ-HI-VAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSN 321

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG---HDTLRG 470
             S   L P  +  +   HV +IS G +H+V +   G ++G+G N   Q+G   ++  RG
Sbjct: 322 ASS---LIPVPVPGIE--HVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRG 376

Query: 471 CLEPTEIFIQEMEEDTG 487
               T+  +     DTG
Sbjct: 377 IPTLTKAVLDTTSPDTG 393


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H  FVL  G V+TCG N     GH    +   RP  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALND 101

Query: 235 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           +G V+  G  T GQLG   T +    P++I  L E+  +VQ+A G  + LA++    V+S
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFS 160

Query: 294 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +G      LG G E   +  P  I++    GI   +++AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG  D+ D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 467
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE-- 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P  + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRTQKVVHICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 7/261 (2%)

Query: 110 SAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVV 167
            A N + ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +V
Sbjct: 82  DAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIV 140

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           QV+    H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  LT+ G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T 
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTK 259

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVY 346
            G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIY 317

Query: 347 TWGKGYCGALGHGDEIDKTLP 367
           ++G G  G LG G   ++  P
Sbjct: 318 SFGLGGNGQLGTGTTSNRKSP 338



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   L  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 291
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ 317
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4204

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAW 4314

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4315 GSNSEGQLGLGHTNHVREPT 4334



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4219



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 145/305 (47%), Gaps = 21/305 (6%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           HAA V + G+VFT G+ S    GH    + + +PRLVE+L       +  G   T  +T+
Sbjct: 291 HAAMVTRQGEVFTWGEESGGRLGH-GVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVTM 349

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G ++T G   H  G LGHG  +    PK I+ PLE +  V  +  GP +   VT  G +
Sbjct: 350 AGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGL-QVASVTCGPWHTALVTSTGQL 408

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 340
           ++FG G+   LGHG + +   P+ +++    G+  + V+ G  H  A+            
Sbjct: 409 FTFGDGTFGVLGHGNRENIAYPKEVESL--AGLRTIAVACGVWHTAAVVEVIVTQSSSSV 466

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           SSG ++TWG G    LGHGD+  +  P  + +L      ++      T  L  +G V+  
Sbjct: 467 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFHKIACGHSLTVGLTTSGHVFTM 526

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   +G LG P    +D  +   + D L    V +I+ G YH  V+T R  ++ +G    
Sbjct: 527 GSTVYGQLGNP---YADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 461 AQLGH 465
            +LGH
Sbjct: 584 GRLGH 588



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 21/227 (9%)

Query: 265 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           PLE   V  V  IA G  +   VT  G V+++G  S   LGHG   D +QPR +++    
Sbjct: 273 PLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMT 332

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGHGDEIDKTLPEPLSSLKSHLAV- 379
            +  +  + G+ H  A+  +G +YTWG G  Y G LGHG +I   +P+ +S     L V 
Sbjct: 333 TVDFI--ACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVA 390

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            V      T ++  TG ++ FG   FG LG  +R   + +  P+ ++SL       ++ G
Sbjct: 391 SVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNR---ENIAYPKEVESLAGLRTIAVACG 447

Query: 440 LYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           ++HT  V +            G+LF +GD ++ +LGH      L+PT
Sbjct: 448 VWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPT 494



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 129/282 (45%), Gaps = 21/282 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           I  G +HT  ++ +  +++ G  +   G+LGHG + +  +   RI+ P     V  V+  
Sbjct: 337 IACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIP-KRISGPLEGLQVASVTCG 395

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  +
Sbjct: 396 PWHTALVTSTGQLFTFGDGTFGVLGHGNREN-IAYPKEVESLAGLRTIAVACGVWHTAAV 454

Query: 233 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                         G + T G     +LGHGD   R  P  +  L +  +  +IA G S 
Sbjct: 455 VEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDF-NFHKIACGHSL 513

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +T +G V++ GS     LG+    D   P  ++  +  G  V  ++ G  HV  L S
Sbjct: 514 TVGLTTSGHVFTMGSTVYGQLGN-PYADGKVPCLVED-KLSGESVEEIACGAYHVAVLTS 571

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 382
              VYTWGKG  G LGHGD  D+  P  + +LK  H+    C
Sbjct: 572 RNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIAC 613



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 142/346 (41%), Gaps = 34/346 (9%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 173
           R+  ++     VF+ G    G LGHG       P   + ++ T ++F        ++  E
Sbjct: 290 RHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDF--------IACGE 341

Query: 174 NHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H   V  +G+++T GD   +    GH          R+   L+G+    VT G   T  
Sbjct: 342 FHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTCGPWHTAL 401

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 286
           +T  G + T G  T G LGHG+  +   PK +  L  + ++  +A G  +  AV      
Sbjct: 402 VTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIA-VACGVWHTAAVVEVIVT 460

Query: 287 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
                  +G ++++G G    LGHG++   L+P  +        H  +++ G    V L 
Sbjct: 461 QSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFH--KIACGHSLTVGLT 518

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           +SG+V+T G    G LG+     K        L      ++        VL     VY +
Sbjct: 519 TSGHVFTMGSTVYGQLGNPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTW 578

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           G    G LG  D G   K   P ++++L+  HV  I+ G  ++  +
Sbjct: 579 GKGANGRLGHGD-GEDRKT--PTLVEALKDKHVKYIACGANYSAAI 621



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 19/236 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           +T G +HT L++++  +F+ G    GVLGHG    + +++ + +   +    + V+    
Sbjct: 392 VTCGPWHTALVTSTGQLFTFGDGTFGVLGHG--NRENIAYPKEVESLAGLRTIAVACGVW 449

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 450 HTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDFNFHKIA 508

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  GHV T GS  +GQLG+    D   P  +       SV +IA G  ++ 
Sbjct: 509 CGHSLTVGLTTSGHVFTMGSTVYGQLGN-PYADGKVPCLVEDKLSGESVEEIACGAYHVA 567

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            +T    VY++G G+N  LGHG+  D   P  ++  + K  HV  ++ G  +  A+
Sbjct: 568 VLTSRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDK--HVKYIACGANYSAAI 621



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 134/300 (44%), Gaps = 21/300 (7%)

Query: 201 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           T   +  PR +E+   +    +  G      +T +G V T G  + G+LGHG   D   P
Sbjct: 264 TRADVLLPRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQP 323

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQT 318
           + +  L  + +V  IA G  +  AVT  G +Y++G G ++   LGHG       P+ I +
Sbjct: 324 RLVESL-AMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRI-S 381

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
              +G+ V  V+ G  H   + S+G ++T+G G  G LGHG+  +   P+ + SL     
Sbjct: 382 GPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRT 441

Query: 379 VQVCARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
           + V      T  +V+            G ++ +G      LG  D+   +  L+P  + +
Sbjct: 442 IAVACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPA 498

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 484
           L   +  +I+ G   TV +T  G +F  G     QLG+    G   CL   ++  + +EE
Sbjct: 499 LIDFNFHKIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPYADGKVPCLVEDKLSGESVEE 558



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 13/128 (10%)

Query: 340 DSSGYVYTWGKGYC-GALGHGDEIDKT---------LPEPLSSLKSHLAVQVCARKRKTF 389
           D+ G VY WG+  C  A+  G + + T         LP PL S        +    R   
Sbjct: 234 DALGDVYVWGEIICDNAVKVGADKNATYLSTRADVLLPRPLESNVVLDVHHIACGFRHAA 293

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
           ++   G V+ +G    G LG    GV   V++PR+++SL    V  I+ G +HT  VT  
Sbjct: 294 MVTRQGEVFTWGEESGGRLGH---GVGKDVIQPRLVESLAMTTVDFIACGEFHTCAVTMA 350

Query: 450 GRLFGFGD 457
           G ++ +GD
Sbjct: 351 GEIYTWGD 358


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 139/296 (46%), Gaps = 12/296 (4%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H  FVL  G V+TCG N     GH    +   RP  V AL       V+ G   T  L  
Sbjct: 45  HTVFVLDDGTVYTCGCNDLGQLGHEKARK---RPEHVGALDAQNIVAVSCGEAHTLALND 101

Query: 235 RGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           +G V+  G  T GQLG   T +    P++I  L E+  +VQ+A G  + LA++    V+S
Sbjct: 102 KGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEI-QIVQVACGYYHSLALSKGSEVFS 160

Query: 294 FGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +G      LG G E   +  P  I++    GI   +++AG  H   L  SG ++ WG+  
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLL--GIPFAQIAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG  D+ D+ +P  L SL++   V +C  +  T  L   G V+ FG  G+G LG   
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG--- 275

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDT 467
              +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG  T
Sbjct: 276 HNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGT 331



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 137/276 (49%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA--RKRPEHVG 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSE-- 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL     V++WG+   G LG G E  K   P  + SL      Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   V  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD--NDRYV-PTLLKSLRTQKVVHICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 7/261 (2%)

Query: 110 SAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVV 167
            A N + ++ G  HTL +++   V++ G +  G LG  P T +C+   R I   S   +V
Sbjct: 82  DAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-PGTEECIRVPRNIKSLSEIQIV 140

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           QV+    H+  + +  +VF+ G N     G     +    P ++++L G+P  Q+ AG  
Sbjct: 141 QVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGA 200

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  LT+ G +   G N  GQLG  D  DR  P  +  L     VV I  G  +  A+T 
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLR-TQKVVHICCGEDHTAALTK 259

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVY 346
            G V++FG+G    LGH     E+ PR +  F   G  V +++ G +H  A + SSG +Y
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRIY 317

Query: 347 TWGKGYCGALGHGDEIDKTLP 367
           ++G G  G LG G   ++  P
Sbjct: 318 SFGLGGNGQLGTGTTSNRKSP 338



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKARKRPEHVGALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G  +    G   T   I  PR +++L  +   QV  G   +  L+    V +
Sbjct: 101 DKGQVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFS 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G +   + +P  I  L  +    QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGYEYKKQNSPHVIKSLLGI-PFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  + +D   P  +++ R +   VV +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQ--KVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   L  Q+ C R+  T  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLG 328



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 6/206 (2%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q+  G YH+L +S  S VFS G +  G LG G E  +  S   I         Q++A  
Sbjct: 140 VQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDDNDR-YVPTLLKSLRTQKVVHICCGEDHTAALT 258

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 291
             G V T G+  +GQLGH  T     P+ +   E +GS+V QI  G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSLVTQITCGRQHTTAFVPSSGRI 316

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ 317
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--AD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PKLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +PK +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 133/275 (48%), Gaps = 11/275 (4%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 213
            R N  S A   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++
Sbjct: 128 PR-NIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS 186

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIV 245

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 334 EHVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           +H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 115 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 291
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ 317
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 138/308 (44%), Gaps = 23/308 (7%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           HA  V + G++F+ G+ S    GH      +  P++++ L G   + V  G   T  +T+
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLGH-GVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTL 359

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++T G  TH  G LGHG  +    P+ +    E   V  I+ G  +   VT  G ++
Sbjct: 360 SGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLF 419

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------- 339
           +FG GS   LGHG+      PR ++T R  G+   +V+ G  H  A              
Sbjct: 420 TFGDGSFGALGHGDHITSNFPREVETLR--GLRTTKVACGVWHTAAAVEAINELSDSGTS 477

Query: 340 --DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
              SS  +YTWG G  G LGHGD   + +PE +++L      QV      T  L   G V
Sbjct: 478 ASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRV 537

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           Y  G   +G LG      ++  L   +   +    V +++ G YH  V+T +  ++ +G 
Sbjct: 538 YTMGSTAYGQLG---SATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGK 594

Query: 458 NERAQLGH 465
               QLGH
Sbjct: 595 GLNGQLGH 602



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 136/305 (44%), Gaps = 23/305 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           I++T +G  ++ +  G YHT  ++ S     +  G+   G+LGHG E +  +        
Sbjct: 335 IIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQM 394

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               V  +S    H A V  +GQ+FT GD S    GH D     F PR VE L+G+   +
Sbjct: 395 EGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNF-PREVETLRGLRTTK 453

Query: 222 VTAGLNFTGF-------LTIRG--------HVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           V  G+  T         L+  G         ++T G    G+LGHGD   R  P+ +A L
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
            E   + Q+A G    +A+T  G VY+ GS +   LG    + +L P  ++        V
Sbjct: 514 IEE-RICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKL-PTCVEGEIANSF-V 570

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
             V+ G  HV  L S   VYTWGKG  G LGHGD   +  P  +  LK      V    +
Sbjct: 571 EEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSK 630

Query: 387 KTFVL 391
            T V+
Sbjct: 631 FTVVI 635



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 28/298 (9%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +    +  G      +T +G + + G  + G+LGHG   D   PK I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKGIH 325
              +V  +A G  +  AVT +G +Y++G G+ N+  LGHG +     P+ +   + +GI 
Sbjct: 341 GT-NVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGG-QMEGIR 398

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--- 382
           V  +S G  H   + S+G ++T+G G  GALGHGD I    P  + +L+     +V    
Sbjct: 399 VSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGV 458

Query: 383 ----ARKRKTFVLVDTGS--------VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
               A       L D+G+        +Y +G    G LG  D   ++  L P  + +L  
Sbjct: 459 WHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGD---NEPRLVPECVAALIE 515

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 482
             + Q++ G   TV +T  GR++  G     QLG  T  G L      E    F++E+
Sbjct: 516 ERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEV 573



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 144/345 (41%), Gaps = 26/345 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 178
           GR+  L+     +FS G    G LGHG E    VS  + I+  S  +V  V+  E H   
Sbjct: 299 GRHAVLVTRQGEIFSWGEESGGRLGHGVEAD--VSHPKIIDTLSGTNVELVACGEYHTCA 356

Query: 179 VLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
           V  SG ++T GD +      GH          ++   ++G+    ++ G   T  +T  G
Sbjct: 357 VTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAG 416

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS------VVQIAAGPSYMLAVTGNGV 290
            + T G  + G LGHGD +    P+ +  L  + +      V   AA    +  ++ +G 
Sbjct: 417 QLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGT 476

Query: 291 --------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
                   +Y++G G    LGHG+    L P  +     +   + +V+ G++  VAL ++
Sbjct: 477 SASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEE--RICQVACGNDLTVALTTA 534

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G VYT G    G LG      K LP  +   + +    +V        VL     VY +G
Sbjct: 535 GRVYTMGSTAYGQLGSATANGK-LPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWG 593

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
               G LG  D    +    P I+D L+   V  ++ G   TVV+
Sbjct: 594 KGLNGQLGHGDNNHRNT---PTIVDVLKDKQVKNVACGSKFTVVI 635



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 339 LDSSGYVYTW--------GKGYCGALGH----GDEIDKTLPEPLSSLKSHLAVQVCARKR 386
            D+ G VY W          G    +G       ++D  LP+ L S        +    R
Sbjct: 241 FDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTVVLDVHGIACGGR 300

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              ++   G ++ +G    G LG    GV   V  P+I+D+L   +V  ++ G YHT  V
Sbjct: 301 HAVLVTRQGEIFSWGEESGGRLG---HGVEADVSHPKIIDTLSGTNVELVACGEYHTCAV 357

Query: 447 TDRGRLFGFGD 457
           T  G L+ +GD
Sbjct: 358 TLSGDLYTWGD 368


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 159/341 (46%), Gaps = 17/341 (4%)

Query: 131 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           +++  G +  G LG G  E  Q +  ++I F   + V Q++    H  F+  +GQV+ CG
Sbjct: 2   ALYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACG 61

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
           +N     GH     P  RP  +  L+     Q+  G   +  LT  G + + G N  GQ+
Sbjct: 62  NNDHHQLGHE---LPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           GH    D      I       +VVQIA G ++ LA+T  G +YS+  GSN     G Q  
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSW--GSNIYGQLGVQSP 176

Query: 310 ELQPRAIQTFRRK---GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           +  P +    R     GI +  ++ G  H   +  S  V+ WGK  CG LG  DE ++  
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAY 236

Query: 367 PEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
           P  L S+++ L V+   C  +   F L + G V+  G   +G LG    G S+  + PR+
Sbjct: 237 PSQLKSMRT-LGVRFVTCGDEYSVF-LTNEGGVFTCGAGNYGQLG---HGASNNEMIPRM 291

Query: 425 LDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLG 464
           +  L    ++Q++ G  HT+ +V   GR++ FG     QLG
Sbjct: 292 VIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLG 332



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 142/302 (47%), Gaps = 17/302 (5%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  HTL L +N  V++CG++    LGH   T + +    +    A  V+Q++    
Sbjct: 40  QIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSR 96

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  + + GQ+ + GDN     GH   N  I  P+++  L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTS 156

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTGNGV 290
            G +++ GSN +GQLG     D   P S APL         +  IA G ++   ++ +  
Sbjct: 157 CGELYSWGSNIYGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSA 214

Query: 291 VYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           V  FG G N C  LG  ++ +   P  +++ R  G+    V+ GDE+ V L + G V+T 
Sbjct: 215 V--FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRF--VTCGDEYSVFLTNEGGVFTC 270

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGS 407
           G G  G LGHG   ++ +P  +  L      QV    R T  LV + G VY FG    G 
Sbjct: 271 GAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQ 330

Query: 408 LG 409
           LG
Sbjct: 331 LG 332



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 12/268 (4%)

Query: 202 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           N  I  P  +E     P +Q+  G   T FLT  G V+ CG+N H QLGH     RP P 
Sbjct: 21  NEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLGHELPTKRPLP- 79

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFR 320
              P  +   V+QIA G  + +A+T  G + S+G      +GH   +D ++ P+ ++   
Sbjct: 80  --IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLV 137

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID---KTLPEPLSSLKSHL 377
            +   VV+++ G+ H +AL S G +Y+WG    G LG     D      P  L+++    
Sbjct: 138 SRT--VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIP 195

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 437
              +      +F++  + +V+G+G    G LG  D         P  L S+R   V  ++
Sbjct: 196 LATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDE---QNRAYPSQLKSMRTLGVRFVT 252

Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            G  ++V +T+ G +F  G     QLGH
Sbjct: 253 CGDEYSVFLTNEGGVFTCGAGNYGQLGH 280



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 15/271 (5%)

Query: 106 IVETSAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           I E  A   +QI  G  H++ ++    + S G + CG +GH  +         + F  + 
Sbjct: 80  IPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSR 139

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD------TNRPIFRPRLVEALKGVP 218
            VVQ++   NH+  +   G++++ G N     G +       +N P+   RL   L G+P
Sbjct: 140 TVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPL---RLTTIL-GIP 195

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
              +  G N +  ++    V   G NT GQLG  D  +R  P  +  +  +G V  +  G
Sbjct: 196 LATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCG 254

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             Y + +T  G V++ G+G+   LGHG  ++E+ PR +      G  + +V+ G+ H +A
Sbjct: 255 DEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIPRMV--IELMGSTITQVACGNRHTLA 312

Query: 339 L-DSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           L  S G VY++G G  G LG  + I +TLP+
Sbjct: 313 LVPSGGRVYSFGLGASGQLGTRNTISQTLPK 343



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 111/246 (45%), Gaps = 14/246 (5%)

Query: 238 VHTCGSNTHGQLGHG----DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           ++  G  +HGQLG G    + +  P+     P      V QIA G  + L +T NG VY+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKP---DSPVQQIACGHRHTLFLTANGQVYA 59

Query: 294 FGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            G+  +  LGH     EL   R +     +   V++++ G  H +AL   G + +WG   
Sbjct: 60  CGNNDHHQLGH-----ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114

Query: 353 CGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
           CG +GH  + D   LP+ L  L S   VQ+      +  L   G +Y +G   +G LG  
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQ 174

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
                     P  L ++    ++ I+ G  H+ +++    +FG+G N   QLG +  +  
Sbjct: 175 SPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNR 234

Query: 472 LEPTEI 477
             P+++
Sbjct: 235 AYPSQL 240



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 4/149 (2%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H+ LIS SS VF  G + CG LG   E  +    +++       V  V+  + +
Sbjct: 199 IACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRAYP-SQLKSMRTLGVRFVTCGDEY 257

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLTI 234
           + F+   G VFTCG  +    GH  +N  +  PR+V  L G    QV  G   T   +  
Sbjct: 258 SVFLTNEGGVFTCGAGNYGQLGHGASNNEMI-PRMVIELMGSTITQVACGNRHTLALVPS 316

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
            G V++ G    GQLG  +T+ +  PK +
Sbjct: 317 GGRVYSFGLGASGQLGTRNTISQTLPKVV 345


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 163/366 (44%), Gaps = 20/366 (5%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N +QI  G YH+L L  + +V++ G +  G  G     T+  S   +       VV ++A
Sbjct: 47  NIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCG-----TEESSIIPVKVKGLKDVVAIAA 101

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H+  + + G V+  G N     G+RD       P  V+ LK V    + AG  ++  
Sbjct: 102 GRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVA--IAAGDGYSLG 159

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           L   G V   G N   Q+  G   D   P  I  L++   VV IAAG  Y LA+  +G V
Sbjct: 160 LKKDGTVWCWGLNESIQVIDGSNKDFSVPFQIKGLKD---VVAIAAGKDYSLALKKDGTV 216

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           + +    N+        DE  P  +Q    K   VV ++AG  H +AL   G V+ WG  
Sbjct: 217 WMWEYKYNYYEQLRRGADEYSPVPVQVEGLK--DVVAIAAGRYHSLALKKDGTVWAWGNN 274

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
           Y G LG+G   D   P  + +LK    V + A +  +  L   G+++ +G   +G LG  
Sbjct: 275 YYGQLGNGKSEDSYDPVQVKNLKD--VVAIAAGENHSLALKKDGTIWAWGDNEWGQLG-- 330

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
              +S+K+  P    SL+   V  I+ G  H++ +   G ++ +G+N   QLG+      
Sbjct: 331 -NSISEKLCVPVQFKSLK--DVVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDS 387

Query: 472 LEPTEI 477
             P ++
Sbjct: 388 YVPVQV 393



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 182/402 (45%), Gaps = 68/402 (16%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  GRYH+L L  + +V++ G++  G LG+G       S+  +   +   VV ++A E
Sbjct: 250 VAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSED---SYDPVQVKNLKDVVAIAAGE 306

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           NH+  + + G ++  GDN     G+  + + +  P   ++LK V    + AG   +  L 
Sbjct: 307 NHSLALKKDGTIWAWGDNEWGQLGNSISEK-LCVPVQFKSLKDVVA--IAAGCEHSLALK 363

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V + G+N +GQLG+G+++D   P  +  L++V   V IA G ++ LA+  +G V++
Sbjct: 364 KDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKDV---VAIATGNAHSLALKKDGTVWA 420

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQ----------------TFRRKGI------------- 324
           +G+     LG+G       P  ++                 F++ G              
Sbjct: 421 WGNNEFGQLGNGTNKSSFVPVQVKGLKDVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLG 480

Query: 325 --------------------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
                                VV V+AG  H +AL   G ++ WG  Y G L  G++I++
Sbjct: 481 NGSGGYGQYYAVPVQVKGLKDVVAVAAGSVHSLALKKDGTIWAWGSNYHGLL--GNDIER 538

Query: 365 T-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
           + +P  +  LK    V + A    + VL   G+V+ +G + F  L    R V   V  P 
Sbjct: 539 SFVPVQVKGLKD--VVAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSV--PV 594

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            +  L+   V  I+ G +H++ +   G ++ +GDN   QLG+
Sbjct: 595 QIKGLK--DVVAIAAGEHHSLGLKKDGTVWAWGDNFFGQLGN 634



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 190/434 (43%), Gaps = 53/434 (12%)

Query: 48  LYPQKFRSLVDLAASQLCALHSI-------YAGMSRNVQIELLNRCNGNWKRVLRFLQSV 100
           + P K + L D+ A      HS+             N   +L NR  G +  V   ++ +
Sbjct: 85  IIPVKVKGLKDVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGL 144

Query: 101 EHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF 160
           +   D+V  +AG+        Y   L  + +V+  G +         E+ Q +  +  +F
Sbjct: 145 K---DVVAIAAGD-------GYSLGLKKDGTVWCWGLN---------ESIQVIDGSNKDF 185

Query: 161 ------PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLV 211
                      VV ++A ++++  + + G V+      ++    R   D   P+  P  V
Sbjct: 186 SVPFQIKGLKDVVAIAAGKDYSLALKKDGTVWMWEYKYNYYEQLRRGADEYSPV--PVQV 243

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
           E LK V    + AG   +  L   G V   G+N +GQLG+G + D   P  +  L++V  
Sbjct: 244 EGLKDVVA--IAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKDV-- 299

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
            V IAAG ++ LA+  +G ++++G      LG+        P   ++ +     VV ++A
Sbjct: 300 -VAIAAGENHSLALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLK----DVVAIAA 354

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           G EH +AL   G V++WG  Y G LG+G+ ID  +P  +  LK    V +      +  L
Sbjct: 355 GCEHSLALKKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKD--VVAIATGNAHSLAL 412

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
              G+V+ +G   FG LG    G +     P  +  L+   V  I+ G  H++     G 
Sbjct: 413 KKDGTVWAWGNNEFGQLG---NGTNKSSFVPVQVKGLK--DVVAIAAGSDHSLAFKKDGT 467

Query: 452 LFGFGDNERAQLGH 465
           ++ +G+NE  QLG+
Sbjct: 468 VWAWGNNEFGQLGN 481



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 171/359 (47%), Gaps = 27/359 (7%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G  H+L L  + +V+S G++  G LG+G       S+  +       VV ++   
Sbjct: 350 VAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSID---SYVPVQVRGLKDVVAIATGN 406

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  + + G V+  G+N     G+  TN+  F P  V+ LK V    + AG + +    
Sbjct: 407 AHSLALKKDGTVWAWGNNEFGQLGN-GTNKSSFVPVQVKGLKDVVA--IAAGSDHSLAFK 463

Query: 234 IRGHVHTCGSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             G V   G+N  GQLG+G          P  +  L++V   V +AAG  + LA+  +G 
Sbjct: 464 KDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDV---VAVAAGSVHSLALKKDGT 520

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 349
           ++++GS  N+   HG   ++++ R+    + KG+  VV ++AG  H + L   G V+ WG
Sbjct: 521 IWAWGS--NY---HGLLGNDIE-RSFVPVQVKGLKDVVAIAAGSNHSLVLKKDGTVWAWG 574

Query: 350 KGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           + +   L      +  ++P  +  LK    V + A +  +  L   G+V+ +G   FG L
Sbjct: 575 EVWFDLLNENSRLVYSSVPVQIKGLKD--VVAIAAGEHHSLGLKKDGTVWAWGDNFFGQL 632

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           G   R      L P  +  L+   +  I+TG +H++ +   G ++ +G+N   QLG++T
Sbjct: 633 GNSPR--EKYSLVPVQVKGLK--DILAIATGEWHSLAIKKDGTVWAWGENSTGQLGNET 687



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 160/357 (44%), Gaps = 24/357 (6%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I TG  H+L L  + +V++ G++  G LG+G   T   SF  +       VV ++A  
Sbjct: 400 VAIATGNAHSLALKKDGTVWAWGNNEFGQLGNG---TNKSSFVPVQVKGLKDVVAIAAGS 456

Query: 174 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           +H+    + G V+  G+N       G     +    P  V+ LK V    V AG   +  
Sbjct: 457 DHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDVVA--VAAGSVHSLA 514

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNG 289
           L   G +   GSN HG LG+         +S  P++  G   VV IAAG ++ L +  +G
Sbjct: 515 LKKDGTIWAWGSNYHGLLGN------DIERSFVPVQVKGLKDVVAIAAGSNHSLVLKKDG 568

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++G      L    ++  L   ++    +    VV ++AG+ H + L   G V+ WG
Sbjct: 569 TVWAWGEVWFDLL---NENSRLVYSSVPVQIKGLKDVVAIAAGEHHSLGLKKDGTVWAWG 625

Query: 350 KGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
             + G LG+      +L P  +  LK  LA+     +  +  +   G+V+ +G    G L
Sbjct: 626 DNFFGQLGNSPREKYSLVPVQVKGLKDILAI--ATGEWHSLAIKKDGTVWAWGENSTGQL 683

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G    G       P  +  ++   V  IS G YH++ +   G ++G+G N R QLG+
Sbjct: 684 GNETSGKDKYSYVPVQVKGIK--DVLAISAGSYHSLALKKDGTVWGWGANARGQLGN 738



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 135/304 (44%), Gaps = 14/304 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV ++A   H+  + + G V+  G+N     G+  +    + P  V+ LK V    + AG
Sbjct: 249 VVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDS-YDPVQVKNLKDVVA--IAAG 305

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            N +  L   G +   G N  GQLG+  +     P     L++V   V IAAG  + LA+
Sbjct: 306 ENHSLALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLKDV---VAIAAGCEHSLAL 362

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             +G V+S+G+     LG+G   D   P  ++  +     VV ++ G+ H +AL   G V
Sbjct: 363 KKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLK----DVVAIATGNAHSLALKKDGTV 418

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           + WG    G LG+G      +P  +  LK    V + A    +      G+V+ +G   F
Sbjct: 419 WAWGNNEFGQLGNGTNKSSFVPVQVKGLKD--VVAIAAGSDHSLAFKKDGTVWAWGNNEF 476

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G LG    G       P  +  L+   V  ++ G  H++ +   G ++ +G N    LG+
Sbjct: 477 GQLGNGSGGYGQYYAVPVQVKGLK--DVVAVAAGSVHSLALKKDGTIWAWGSNYHGLLGN 534

Query: 466 DTLR 469
           D  R
Sbjct: 535 DIER 538



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 26/254 (10%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L L  + ++++ GS+  G+LG+  E     SF  +       VV ++A  
Sbjct: 503 VAVAAGSVHSLALKKDGTIWAWGSNYHGLLGNDIER----SFVPVQVKGLKDVVAIAAGS 558

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGF 231
           NH+  + + G V+  G+   +     + +R ++   P  ++ LK V    + AG + +  
Sbjct: 559 NHSLVLKKDGTVWAWGE--VWFDLLNENSRLVYSSVPVQIKGLKDVVA--IAAGEHHSLG 614

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIAPLEEVG--SVVQIAAGPSYMLAVTGN 288
           L   G V   G N  GQLG     + P  K S+ P++  G   ++ IA G  + LA+  +
Sbjct: 615 LKKDGTVWAWGDNFFGQLG-----NSPREKYSLVPVQVKGLKDILAIATGEWHSLAIKKD 669

Query: 289 GVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           G V+++G  S   LG+   G+      P  ++  +     V+ +SAG  H +AL   G V
Sbjct: 670 GTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIK----DVLAISAGSYHSLALKKDGTV 725

Query: 346 YTWGKGYCGALGHG 359
           + WG    G LG+G
Sbjct: 726 WGWGANARGQLGNG 739


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3998 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4056

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4057 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4115

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4116 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4172

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4173 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4230

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4231 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4290

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4291 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4326



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3991 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4048

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4049 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4107

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4108 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4165

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4166 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4225

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4226 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAW 4282

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4283 GSNSEGQLGLGHTNHVREPTLVTV 4306



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3966 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4020

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4021 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4080

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4081 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4138

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4139 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4187



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3966 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4022

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4023 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4079

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4080 KLGHGNSDRQRRPRQIEALQGEE 4102



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HAA V ++G+VFT G+ S    GH      +  PRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVH-PRLVESLAICNVDIVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T  G ++T G  TH  G LG+G  +    PK I+ + E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTWHTA 197

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 339
            VT  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESL--SGLKTIAVACGVWHTAAVVEVI 255

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SSG ++TWG G    LGHGD+  K  P  ++SL  +   ++      T  L 
Sbjct: 256 VTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDFCRIACGHSLTVGLT 315

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V   G   +G LG P    SD  L P +++ +   HV Q++ G YH  V+T++  +
Sbjct: 316 TSGQVLSMGNTVYGQLGNPR---SDGKL-PCLIEDIMGEHVVQVACGSYHVAVLTNKSEV 371

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           F +G     +LGH  +     PT
Sbjct: 372 FTWGKGANGRLGHGDVEDRKIPT 394



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 123/273 (45%), Gaps = 21/273 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G +HT  ++ S     +  G+   G+LG+G + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGT 193

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFL 232
            H A V   GQ+FT GD +    GH   NR  F  PR VE+L G+    V  G+  T  +
Sbjct: 194 WHTALVTSRGQLFTFGDGTFGVLGH--GNRESFSCPREVESLSGLKTIAVACGVWHTAAV 251

Query: 233 T-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                         G + T G     +LGHGD   +  P  +A L +     +IA G S 
Sbjct: 252 VEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDY-DFCRIACGHSL 310

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +T +G V S G+     LG+     +L P  I+     G HVV+V+ G  HV  L +
Sbjct: 311 TVGLTTSGQVLSMGNTVYGQLGNPRSDGKL-PCLIEDI--MGEHVVQVACGSYHVAVLTN 367

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
              V+TWGKG  G LGHGD  D+ +P  + SL+
Sbjct: 368 KSEVFTWGKGANGRLGHGDVEDRKIPTLVESLR 400



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTAKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGS 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR +++     + +  V+ G+ H  A+ +SG +YTWG G    G LG+G ++  
Sbjct: 114 REDSVHPRLVESLAICNVDI--VACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSH 171

Query: 365 TLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P+ +S  L+ H    V      T ++   G ++ FG   FG LG  +R   +    PR
Sbjct: 172 WIPKRISGVLEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNR---ESFSCPR 228

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT  V +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKL 288

Query: 473 EPT 475
           +PT
Sbjct: 289 KPT 291



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 146/347 (42%), Gaps = 37/347 (10%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 173
           ++  L+  N  VF+ G    G LGHG       P   + ++   ++         V+  E
Sbjct: 87  KHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDI--------VACGE 138

Query: 174 NHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            H   V  SG+++T GD   N        D +  I + R+   L+G     V+ G   T 
Sbjct: 139 FHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPK-RISGVLEGHQVAYVSCGTWHTA 197

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 286
            +T RG + T G  T G LGHG+      P+ +  L  + ++  +A G  +  AV     
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIA-VACGVWHTAAVVEVIV 256

Query: 287 -------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
                   +G ++++G G    LGHG++  +L+P  + +         R++ G    V L
Sbjct: 257 TQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASL--IDYDFCRIACGHSLTVGL 314

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
            +SG V + G    G LG+    D  LP  +  +     VQV        VL +   V+ 
Sbjct: 315 TTSGQVLSMGNTVYGQLGN-PRSDGKLPCLIEDIMGEHVVQVACGSYHVAVLTNKSEVFT 373

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           +G    G LG  D  V D+ + P +++SLR   V  I+ G   T  +
Sbjct: 374 WGKGANGRLGHGD--VEDRKI-PTLVESLRDRAVRHIACGSNFTSAI 417



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 18/278 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESL- 126

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 325
            + +V  +A G  +  AVT +G +Y++G G++    LG+G       P+ I     +G  
Sbjct: 127 AICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGV-LEGHQ 185

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  VS G  H   + S G ++T+G G  G LGHG+    + P  + SL     + V    
Sbjct: 186 VAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGV 245

Query: 386 RKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
             T  +V+            G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDK---EPKLKPTCVASLIDYDFC 302

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           +I+ G   TV +T  G++   G+    QLG+    G L
Sbjct: 303 RIACGHSLTVGLTTSGQVLSMGNTVYGQLGNPRSDGKL 340



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++ G +HT L+ S   +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPR--EVESLSGLKTIAVACGVW 246

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A V++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGD-KEPKLKPTCVASLIDYDFCRIA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 281
            G + T  LT  G V + G+  +GQLG+     R   K    +E++    VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGQVLSMGNTVYGQLGN----PRSDGKLPCLIEDIMGEHVVQVACGSYH 361

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
           +  +T    V+++G G+N  LGHG+  D   P  +++ R + +
Sbjct: 362 VAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAV 404



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 4/170 (2%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L P+ +++  +  + V  V  G +H   +  +G V+TWG+   G LGHG   D   P 
Sbjct: 64  DFLLPKPLES--KLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPR 121

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 427
            + SL       V   +  T  +  +G +Y +G  G  ++G    G       P RI   
Sbjct: 122 LVESLAICNVDIVACGEFHTCAVTTSGELYTWG-DGTHNIGLLGNGTDVSHWIPKRISGV 180

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           L  H V+ +S G +HT +VT RG+LF FGD     LGH        P E+
Sbjct: 181 LEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREV 230



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 24/141 (17%)

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCG---------ALGHGDEIDKTLPEPLSSLKSHLAVQ 380
           SA D++    DSSG VY WG+  C           +    + D  LP+P   L+S L + 
Sbjct: 26  SAQDDY----DSSGDVYVWGEVICDNTVRVGPDTVIRSTAKADFLLPKP---LESKLVLD 78

Query: 381 V----CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
           V    C  K    V    G V+ +G    G LG    G  +  + PR+++SL   +V  +
Sbjct: 79  VYHVDCGVKHAALV-TKNGEVFTWGEESGGRLGH---GSREDSVHPRLVESLAICNVDIV 134

Query: 437 STGLYHTVVVTDRGRLFGFGD 457
           + G +HT  VT  G L+ +GD
Sbjct: 135 ACGEFHTCAVTTSGELYTWGD 155


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 141/276 (51%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--AD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ L SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLADI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ +++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PKLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +PK +  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGLDCKKQASPKLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 133/275 (48%), Gaps = 11/275 (4%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 213
            R N  S A   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++
Sbjct: 128 PR-NIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS 186

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           L G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIV 245

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G 
Sbjct: 246 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGR 303

Query: 334 EHVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           +H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 304 QHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 6/206 (2%)

Query: 115 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q+  G YH+L +S +S VF  G +  G LG G +  +  S   +        +QV+A  
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGG 199

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  SG +F  G N     G  D N   + P L+++L+      +  G + T  LT
Sbjct: 200 AHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVV 291
             G V T G+  +GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ 317
           YSFG G N  LG G   +   P  ++
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 142/302 (47%), Gaps = 12/302 (3%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     H  FVL  G V+TCG N     GH  + +   +P  V AL       V+ G
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDAQNIVAVSCG 92

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
              T  L  +G V+  G ++ GQLG  G       P++I  L ++  +VQ+A G  + LA
Sbjct: 93  EAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDI-QIVQVACGYYHSLA 151

Query: 285 VTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           ++    V+ +G      LG G +   +  P+ I++    GI  ++V+AG  H   L  SG
Sbjct: 152 LSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL--GIPFMQVAAGGAHSFVLTLSG 209

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            ++ WG+   G LG  DE D+ +P  L SL++   V +C  +  T  L   G V+ FG  
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQ 462
           G+G LG      +   + PR +  L    V+QI+ G  HT   V   GR++ FG     Q
Sbjct: 270 GYGQLG---HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQ 326

Query: 463 LG 464
           LG
Sbjct: 327 LG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 141/286 (49%), Gaps = 12/286 (4%)

Query: 95  RFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCV 153
           R  +SV+H   I   +  + + I  G+  T  ++++  V++ G S  G LG G      +
Sbjct: 536 RSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAI 595

Query: 154 SFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 212
              ++    ++HVV Q+S   NHAA      + F  G N+    G    +  +  P  + 
Sbjct: 596 VVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEIT 655

Query: 213 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-----TLDRPTPKSIAPLE 267
           +L+    + +  G   T   T  G V +CG   HGQLGHGD      L +  P     +E
Sbjct: 656 SLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVE 715

Query: 268 EVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
             G   +V+++AG     A+T  G ++++G G  + LGH    +E  PR ++ F +  I 
Sbjct: 716 GFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAK--IR 773

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPL 370
           VV VS GD H++ALD SG  Y+WG G  G LGHG+  ++ TLP P+
Sbjct: 774 VVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERETLPRPI 819



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 143/296 (48%), Gaps = 18/296 (6%)

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
           LQ   VF  GD  +   G++ +      P +V A + V  K    G   T FL+  G V 
Sbjct: 87  LQGSHVFMWGDGENGKLGNQ-SEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVL 145

Query: 240 TCGSNTHGQLGHGD-TLDRPTP-------KSIAPLEEV----GSVVQIAAGPSYMLAVTG 287
           +CGSN +GQLG GD  L R TP       KS+  L+ +     ++V IAAG  + LA+  
Sbjct: 146 SCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALND 205

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            G ++S+GSGS   LG G   +   PR + + +     VV ++ G  H  A+ + G V+T
Sbjct: 206 TGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNS--KVVHIACGAHHTAAITTVGDVWT 263

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WGKG  G LGH    ++  P   +SL+   A ++      T V++ +G +Y  G    G 
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
           LG  D   +D+++ P ++       V  I      ++ +T+ G++F FG+     L
Sbjct: 324 LGLGD--ATDRII-PTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHL 376



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 15/287 (5%)

Query: 183  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
            G VF  G+++    G R   +    P L+++L       ++A  + + F+T  G ++  G
Sbjct: 1610 GCVFVWGEDTCGQLGIRGL-QAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSG 1668

Query: 243  SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
             + HG+LG G     PTP  I  L  V  ++++A G  + LA+T    VY++G G     
Sbjct: 1669 GSEHGRLGLGHMAPAPTPVEIRSLNTV-KIMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727

Query: 303  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-E 361
            G    +D L+P+ + +       ++ V AG  H  AL   G ++ WGK   G LG G   
Sbjct: 1728 GVSNTNDVLEPQELSSL--AACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTS 1785

Query: 362  IDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSD 417
              +  P  +S+L    + V + A      + V + +++  G    G LG   F DR    
Sbjct: 1786 AAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLT 1845

Query: 418  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             V      D+L    +   S G  HT  V+  G L  +G+    QLG
Sbjct: 1846 AV------DALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLG 1886



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 169/430 (39%), Gaps = 81/430 (18%)

Query: 115  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQV 169
            + I  GR+H + L S   V S G+   G LG        T Q V       P      ++
Sbjct: 1274 LSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAP-----CKI 1328

Query: 170  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL--N 227
                 H+A +L+SG++   G N     GH DT +    PR+ + L+ +  K  TAGL  N
Sbjct: 1329 LCGGWHSAAILESGKILLWGKNVYGQLGHGDT-KSCSAPRVNQYLR-LEGKVRTAGLGAN 1386

Query: 228  FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSI-APLEEVG--SVVQIAAGPSYM 282
             T  + +   V   GSN  GQLG    LD P  T K++   +EE+   ++ Q+AAG  + 
Sbjct: 1387 HTLVVMVANKVFAMGSNIDGQLG----LDDPSRTGKNVPVSIEELNGKNICQVAAGDQHS 1442

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            LA++  G V+S+G      LGH    D+L P  +    +    V  ++ G     A+ + 
Sbjct: 1443 LALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAK 1502

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK---------SHLAVQVCARKRKTFVLVD 393
            G V+TWG G  G LGH  ++    P  +              H+A  V   + KT  L  
Sbjct: 1503 GEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKHMAGIVFKPRMKTIELTG 1562

Query: 394  T----------------------------------------------GSVYGFGWMGFGS 407
            +                                              G V+ +G    G 
Sbjct: 1563 SSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQ 1622

Query: 408  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
            LG   RG+      P ++ SL A  +  IS     +  VTD G L+  G +E  +LG   
Sbjct: 1623 LGI--RGLQ-AARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGH 1679

Query: 468  LRGCLEPTEI 477
            +     P EI
Sbjct: 1680 MAPAPTPVEI 1689



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 15/202 (7%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-----PRAIQTFRRKGIH 325
           + VQ+   PS      G+G +Y++G G    LGHG ++   +     P+ I+T  +  + 
Sbjct: 501 ATVQVRDSPSR----EGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAK--MS 554

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCG--ALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           VV ++ G +   AL  +G VYTWGK   G   LG G  +   +P+ +  L SH+  Q+  
Sbjct: 555 VVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISL 614

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
            +       D    + +G   FG LG P   +S  +  P  + SLR  ++  I+ G +HT
Sbjct: 615 GRNHAACSTDMHKFFVWGSNTFGQLGIPH--ISSYMPDPYEITSLREANIRSIACGGWHT 672

Query: 444 VVVTDRGRLFGFGDNERAQLGH 465
           ++ T+ G +   G     QLGH
Sbjct: 673 LISTNTGSVMSCGKGWHGQLGH 694



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 12/253 (4%)

Query: 237  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            H++T G   +G+LGHG      TP+ I        +V++A G  + LA + +G VY++G+
Sbjct: 1180 HIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGA 1239

Query: 297  GSNFCLGHGEQHD------ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            G    LG  E  D         P+ +   +R    ++ ++ G  H + L S   V +WG 
Sbjct: 1240 GDRGQLGSLENFDCVKINYAFNPQPVLNLKR--YFILSIACGRWHNMTLTSERQVLSWGA 1297

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  G LG    + K  P+ + +L      ++      +  ++++G +  +G   +G LG 
Sbjct: 1298 GEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGH 1357

Query: 411  PDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
             D   +     PR+   LR    V     G  HT+VV    ++F  G N   QLG D   
Sbjct: 1358 GD---TKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPS 1414

Query: 470  GCLEPTEIFIQEM 482
               +   + I+E+
Sbjct: 1415 RTGKNVPVSIEEL 1427



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 132/308 (42%), Gaps = 17/308 (5%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFT----RINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
           +++ G  + G LGHG E T+         RI   +   VV ++  ++  A +  +G+V+T
Sbjct: 517 IYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYT 576

Query: 188 CGDNSSFCCGHRDTNRP--IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
            G ++    G   + +P  I  P+LV+ L      Q++ G N     T        GSNT
Sbjct: 577 WGKSAQGKLG-LGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNT 635

Query: 246 HGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
            GQLG  H  +   P P  I  L E  ++  IA G  + L  T  G V S G G +  LG
Sbjct: 636 FGQLGIPHISSY-MPDPYEITSLREA-NIRSIACGGWHTLISTNTGSVMSCGKGWHGQLG 693

Query: 304 HGEQHDELQPRAIQTFRRKGIH------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
           HG+            + +K +       +V+VSAG E   A+ + G ++TWGKG    LG
Sbjct: 694 HGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLG 753

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           H    ++  P  +        V V         L  +G  Y +G    G LG  +    +
Sbjct: 754 HESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERE 813

Query: 418 KVLRPRIL 425
            + RP +L
Sbjct: 814 TLPRPIML 821



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 131/302 (43%), Gaps = 27/302 (8%)

Query: 120 GRYHTLLIS-NSSVFSCGSSLCGVLGHG------------PETTQCVSFTRINFPSAAHV 166
           G+ HTL +S +  V SCGS++ G LG G            P   + +   +    S  ++
Sbjct: 131 GKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNI 190

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V ++A   H+  +  +G++F+ G  S    G   D N     PR V +L+      +  G
Sbjct: 191 VGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAE--SPRFVASLQNSKVVHIACG 248

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            + T  +T  G V T G    GQLGH    +  +P+  A L + G+  +I  G  + L +
Sbjct: 249 AHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGA-QKIRCGDDHTLVI 307

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             +G +YS G+ ++  LG G+  D + P  +  F  +   V+ + A     +AL ++G V
Sbjct: 308 LRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANE--KVIDIDAKGCRSIALTNTGKV 365

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           + +G      L         LP      KS L + V       F + DTG +  F W  F
Sbjct: 366 FAFGNETEPHLNRIPRFVAGLP------KSDLIIAVARTAHFDFAISDTGQL--FRWRPF 417

Query: 406 GS 407
            S
Sbjct: 418 SS 419



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 142/353 (40%), Gaps = 12/353 (3%)

Query: 121  RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
            RY   L     +++ G  + G LGHG  T         +FPS   +V+V+    H+    
Sbjct: 1170 RYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARS 1229

Query: 181  QSGQVFTCGDNSSFCCGHRDTNRPI-----FRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              G V+  G       G  +    +     F P+ V  LK      +  G      LT  
Sbjct: 1230 FDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSE 1289

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
              V + G+   GQLG    L + TP+ +  L+   +  +I  G  +  A+  +G +  +G
Sbjct: 1290 RQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGR-APCKILCGGWHSAAILESGKILLWG 1348

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                  LGHG+      PR  Q  R +G  V     G  H + +  +  V+  G    G 
Sbjct: 1349 KNVYGQLGHGDTKSCSAPRVNQYLRLEG-KVRTAGLGANHTLVVMVANKVFAMGSNIDGQ 1407

Query: 356  LGHGD--EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LG  D     K +P  +  L      QV A  + +  L   G V+ +G   FG LG    
Sbjct: 1408 LGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGH--E 1465

Query: 414  GVSDKVLRPRILDSLR-AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             ++DK+    +L+  +    V  I+ G   +  ++ +G +F +G+ E  +LGH
Sbjct: 1466 TITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGH 1518



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 20/257 (7%)

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPT-----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           G+++T G    G+LGHG    R       PK I  L ++ SVV IA G     A+T  G 
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKM-SVVFIACGKDSTAALTDTGK 573

Query: 291 VYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVV-RVSAGDEHVVALDSSGYVYT 347
           VY++G  +     LG G+    + P+ +Q       HVV ++S G  H          + 
Sbjct: 574 VYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSS---HVVCQISLGRNHAACSTDMHKFFV 630

Query: 348 WGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWM 403
           WG    G LG    I   +P+P  ++SL+      +      T +  +TGSV   G GW 
Sbjct: 631 WGSNTFGQLGI-PHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWH 689

Query: 404 G-FGSLGFPDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G  G   +       K L    +I++      + ++S G   +  +T++GRLF +G  + 
Sbjct: 690 GQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDE 749

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH++ +    P E+
Sbjct: 750 YQLGHESSKNEAYPREV 766



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 166/417 (39%), Gaps = 65/417 (15%)

Query: 120  GRYHTLLIS-NSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            G  HTL++   + VF+ GS++ G LG   P  T       I   +  ++ QV+A + H+ 
Sbjct: 1384 GANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSL 1443

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQVTAGLNFTGFLTIRG 236
             +   G+V++ G +     GH      +    L+E  K  P  K +  G  F+  ++ +G
Sbjct: 1444 ALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKG 1503

Query: 237  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM-----------LAV 285
             V T G+   G+LGH   +    P  I    EV   VQIA G  +M           + +
Sbjct: 1504 EVFTWGNGESGELGHAPKVLTYAPSLIKDFSEV---VQIACGFKHMAGIVFKPRMKTIEL 1560

Query: 286  TG------NGVVYS--FGSGS------------------NFCLGHGEQHD---------- 309
            TG      N   +S    +GS                   F   + ++H           
Sbjct: 1561 TGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTC 1620

Query: 310  -ELQPRAIQTFRRKGI-------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
             +L  R +Q  R   +        +V +SA  +    +  SG +Y  G    G LG G  
Sbjct: 1621 GQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHM 1680

Query: 362  IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
                 P  + SL +   ++V         L +   VY +G   +G+ G  +   ++ VL 
Sbjct: 1681 APAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSN---TNDVLE 1737

Query: 422  PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE-PTEI 477
            P+ L SL A  +  +  G +H+  ++  G LF +G N   QLG  T     + PT+I
Sbjct: 1738 PQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKI 1794



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 10/204 (4%)

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            A   Y + + G   +Y++G G N  LGHG       P+ I +F      +V V+ G EH 
Sbjct: 1167 ANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSN-TKIVEVACGCEHS 1225

Query: 337  VALDSSGYVYTWGKGYCGALGHGDEIDKTL------PEPLSSLKSHLAVQVCARKRKTFV 390
            +A    G VY WG G  G LG  +  D         P+P+ +LK +  + +   +     
Sbjct: 1226 LARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMT 1285

Query: 391  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
            L     V  +G   FG LG  D  +S     P+++ +L      +I  G +H+  + + G
Sbjct: 1286 LTSERQVLSWGAGEFGQLGL-DHNLSKGT--PQMVKALDGRAPCKILCGGWHSAAILESG 1342

Query: 451  RLFGFGDNERAQLGHDTLRGCLEP 474
            ++  +G N   QLGH   + C  P
Sbjct: 1343 KILLWGKNVYGQLGHGDTKSCSAP 1366



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 153/366 (41%), Gaps = 28/366 (7%)

Query: 132  VFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG- 189
            VF  G   CG LG  G +  +  S  +     A  +V +SA+ + +AFV  SG ++  G 
Sbjct: 1612 VFVWGEDTCGQLGIRGLQAARSPSLMQSLL--ATSIVHISANSDMSAFVTDSGSLYVSGG 1669

Query: 190  -DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
             ++     GH     P   P  + +L  V   +V  G      LT    V+  G    G 
Sbjct: 1670 SEHGRLGLGHM---APAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGN 1726

Query: 249  LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 307
             G  +T D   P+ ++ L    S++ + AG  +  A++  G ++ +G  SN  LG G   
Sbjct: 1727 AGVSNTNDVLEPQELSSLAAC-SIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTS 1785

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD--SSGYVYTWGKGYCGALGHGDEIDKT 365
              E  P  I      G+ V+ VS G  H   L   +S  ++T G    G LG GD +D++
Sbjct: 1786 AAEDSPTKISNL--DGV-VMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRS 1842

Query: 366  LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
                + +L     V        T  +   G +  +G    G LG    G+S  +  P  L
Sbjct: 1843 TLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGL-KAGLSKDIENPVQL 1901

Query: 426  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR------------GCLE 473
             ++    + ++  G   T+VV+++G L+  G      LG ++ R            G ++
Sbjct: 1902 PAICNDPMVKVVCGQEVTIVVSEKGELYMAGYESTIGLGGNSSRRREFDVSFREVEGLIQ 1961

Query: 474  PTEIFI 479
            PT+I +
Sbjct: 1962 PTQIAV 1967



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 24/200 (12%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSA-GDEHVVALDSSGYVYT 347
           V+ +G G N  LG+  Q +E+Q  P  +  FR     +V+V A G +H + L + G V +
Sbjct: 92  VFMWGDGENGKLGN--QSEEIQHVPYIVPAFRNV---LVKVCALGKQHTLFLSADGVVLS 146

Query: 348 WGKGYCGALGHGDE-IDKTLP--EP-----LSSLKSHLA-----VQVCARKRKTFVLVDT 394
            G    G LG GD  + ++ P  EP     L  L++ +      V + A    +  L DT
Sbjct: 147 CGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDT 206

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G ++ +G   +G LG    G       PR + SL+   V  I+ G +HT  +T  G ++ 
Sbjct: 207 GKIFSWGSGSWGKLGI---GSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWT 263

Query: 455 FGDNERAQLGHDTLRGCLEP 474
           +G   R QLGH +++    P
Sbjct: 264 WGKGLRGQLGHKSVKEEFSP 283



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 135/313 (43%), Gaps = 8/313 (2%)

Query: 94   LRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQC 152
            +R LQ+    S +    A + + I+     +  +++S S++  G S  G LG G      
Sbjct: 1625 IRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLG-HMAPA 1683

Query: 153  VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 212
             +   I   +   +++V+    H   + +  +V+  GD      G  +TN  +  P+ + 
Sbjct: 1684 PTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTN-DVLEPQELS 1742

Query: 213  ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGS 271
            +L       V AG   +  L+  G +   G N++GQLG G T     +P  I+ L+ V  
Sbjct: 1743 SLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVM 1802

Query: 272  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
             V + A  S +L    +  +++ G  +N  LG G+  D     A+     +   +V  S 
Sbjct: 1803 DVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDR--QIVSASC 1860

Query: 332  GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTF 389
            G  H  A+   G + TWG G  G LG    + K +  P  L ++ +   V+V   +  T 
Sbjct: 1861 GAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPMVKVVCGQEVTI 1920

Query: 390  VLVDTGSVYGFGW 402
            V+ + G +Y  G+
Sbjct: 1921 VVSEKGELYMAGY 1933



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 12/250 (4%)

Query: 115  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            M++  G YH L L     V++ G    G  G    T   +    ++  +A  ++ V A  
Sbjct: 1698 MKVACGTYHCLALTEEKRVYAWGDGKWGNAGVS-NTNDVLEPQELSSLAACSIIGVHAGG 1756

Query: 174  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 232
             H+A + Q G +F  G NS+   G   T+     P  +  L GV    V+ G N +  L 
Sbjct: 1757 FHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLM 1815

Query: 233  -TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
                 ++ TCG N +GQLG GD +DR T  ++  L++   +V  + G ++  AV+  G +
Sbjct: 1816 QVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDR-QIVSASCGAAHTAAVSQYGDL 1874

Query: 292  YSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             ++G+G N  LG   G   D   P  +       +  V+V  G E  + +   G +Y   
Sbjct: 1875 ITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPM--VKVVCGQEVTIVVSEKGELYM-- 1930

Query: 350  KGYCGALGHG 359
             GY   +G G
Sbjct: 1931 AGYESTIGLG 1940



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 146/420 (34%), Gaps = 70/420 (16%)

Query: 106  IVETSAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVS---FTRINFP 161
            I E +  N  Q+  G  H+L +S    V+S G S  G LGH   T +        R   P
Sbjct: 1424 IEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIP 1483

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSS-------------------------FCC 196
                V  ++     +A +   G+VFT G+  S                           C
Sbjct: 1484 --PDVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIAC 1541

Query: 197  GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI---------------------- 234
            G +     +F+PR+                 F+G +                        
Sbjct: 1542 GFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAF 1601

Query: 235  -------RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
                    G V   G +T GQLG        +P  +  L    S+V I+A       VT 
Sbjct: 1602 SASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLAT-SIVHISANSDMSAFVTD 1660

Query: 288  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            +G +Y  G   +  LG G  H    P  ++      + +++V+ G  H +AL     VY 
Sbjct: 1661 SGSLYVSGGSEHGRLGLG--HMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYA 1718

Query: 348  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
            WG G  G  G  +  D   P+ LSSL +   + V A    +  L   G ++ +G    G 
Sbjct: 1719 WGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQ 1778

Query: 408  LGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD--RGRLFGFGDNERAQLG 464
            LG        D   +   LD +    V  +S G  H+ V+       LF  G N   QLG
Sbjct: 1779 LGLGTTSAAEDSPTKISNLDGV----VMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLG 1834



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 4/151 (2%)

Query: 320  RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA- 378
             +K    +R  A   + V L+   ++YTWG G  G LGHG     + P+ ++S  S+   
Sbjct: 1156 EKKHFEQIRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKI 1215

Query: 379  VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV---LRPRILDSLRAHHVSQ 435
            V+V      +      G VY +G    G LG  +     K+     P+ + +L+ + +  
Sbjct: 1216 VEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILS 1275

Query: 436  ISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            I+ G +H + +T   ++  +G  E  QLG D
Sbjct: 1276 IACGRWHNMTLTSERQVLSWGAGEFGQLGLD 1306



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 103/472 (21%), Positives = 191/472 (40%), Gaps = 75/472 (15%)

Query: 50  PQKFRSLVDLAASQLCALHSI-------YAGMSRNVQIELLNRCNGNWKRV--------- 93
           P K +SL  L A  + +L++I       Y  ++ N   ++ +  +G+W ++         
Sbjct: 171 PSKQKSLDKLQAI-IQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAE 229

Query: 94  -LRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQ 151
             RF+ S+++S  +          I  G +HT  I+    V++ G  L G LGH  ++ +
Sbjct: 230 SPRFVASLQNSKVV---------HIACGAHHTAAITTVGDVWTWGKGLRGQLGH--KSVK 278

Query: 152 CVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 210
                R+N         ++   ++H   +L+SGQ+++ G N+    G  D    I  P L
Sbjct: 279 EEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRII-PTL 337

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           V          + A    +  LT  G V   G+ T   L          P+ +A L +  
Sbjct: 338 VTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNR-------IPRFVAGLPKSD 390

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRV 329
            ++ +A    +  A++  G ++ +   S+         +E   R +++F   KG  VVR+
Sbjct: 391 LIIAVARTAHFDFAISDTGQLFRWRPFSS---------EEESSRMLESFHAIKG--VVRM 439

Query: 330 SAGDEHVV-----------ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
             G  H+            A+ S     ++      A       +K LP  L +   +L 
Sbjct: 440 FCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILP-ALGTNTEYLD 498

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV-----SDKVLRPRILDSLRAHHV 433
                + R +      G +Y +G   FG LG    GV      + V  P+ +++L    V
Sbjct: 499 EFATVQVRDSPSREGDGYIYTYGKGVFGRLG---HGVEYTRSEESVKHPKRIETLAKMSV 555

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 485
             I+ G   T  +TD G+++ +G + + +LG     G  +P  I + ++ +D
Sbjct: 556 VFIACGKDSTAALTDTGKVYTWGKSAQGKLG----LGSGKPLAIVVPQLVQD 603


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 154/319 (48%), Gaps = 16/319 (5%)

Query: 156 TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
           ++I  PS      A +VVQV+        V   G+V+ CG+ ++   G   ++  +  PR
Sbjct: 16  SKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPR 75

Query: 210 LVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
            + AL     K+V   +G      LT+ G V   G    G+LGH   ++   P+ I  L+
Sbjct: 76  QITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALK 135

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
               +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V+
Sbjct: 136 -TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVI 192

Query: 328 RVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           +V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q+    
Sbjct: 193 QVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGA 252

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
           + +  L  +G V+ +G   +  LG    G    V +P++++ LR   +  ++ G  H + 
Sbjct: 253 QFSLALTKSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 309

Query: 446 VTDRGRLFGFGDNERAQLG 464
           VTD G+++ +GDN+  Q G
Sbjct: 310 VTDSGQVYAWGDNDHGQQG 328



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 9/262 (3%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 266
           P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L
Sbjct: 21  PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITAL 80

Query: 267 EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
              V   V + +G  +  A+T +G V+ +G G +  LGH  + +  +PR I+  + K I 
Sbjct: 81  SSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 140

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 383
              ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +
Sbjct: 141 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS 198

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
           R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   +
Sbjct: 199 RDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFS 255

Query: 444 VVVTDRGRLFGFGDNERAQLGH 465
           + +T  G ++ +G  +  +LGH
Sbjct: 256 LALTKSGVVWTWGKGDYFRLGH 277



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 109/232 (46%), Gaps = 7/232 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+ T L  +  VF  G    G LGH      C     I       +  ++   +H+A +
Sbjct: 94  GRHATALTVDGKVFWWGEGDDGKLGH-FSRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 152

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
             SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 153 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 211

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 212 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 270

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             F LGHG      +P+ ++  R K   +V V+ G  H +A+  SG VY WG
Sbjct: 271 DYFRLGHGSDVHVRKPQVVEGLRGK--KIVHVAVGALHCLAVTDSGQVYAWG 320



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 112/242 (46%), Gaps = 13/242 (5%)

Query: 242 GSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           G N   QLG   G  +  P+  ++++ L    +VVQ+A G   + AVT  G VY+ G  +
Sbjct: 3   GLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVAGGSKSLFAVTVEGKVYACGEAT 58

Query: 299 NFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
           N  LG G     +  PR I       +  V V +G  H  AL   G V+ WG+G  G LG
Sbjct: 59  NGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLG 118

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           H   ++   P  + +LK+     +      +  L  +G +Y +G   +G LG  D     
Sbjct: 119 HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ- 177

Query: 418 KVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             L+P+++  L  H V Q++ G     T+ +TD G +F +GD +  +LG     GC  P 
Sbjct: 178 --LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 235

Query: 476 EI 477
            I
Sbjct: 236 NI 237



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 11/194 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 142 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 200

Query: 176 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 201 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 259

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V T G   + +LGHG  +    P+ +  L     +V +A G  + LAVT +G VY+
Sbjct: 260 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK-KIVHVAVGALHCLAVTDSGQVYA 318

Query: 294 FGSGSNFCLGHGEQ 307
           +G        HG+Q
Sbjct: 319 WGDND-----HGQQ 327


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 148/312 (47%), Gaps = 21/312 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V+   NHAA V + G+V+  G       G R  +  I  P++V++L  +  K+V  G
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQR-IDMDISSPKIVDSLSDIRVKKVACG 364

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYML 283
              T  LT  G V+T G ++   L     +     T K   P+E + S+  IA G  +  
Sbjct: 365 EYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGI-SISSIACGEWHTA 423

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 339
            V+  G ++++G G+   LGHG  H    P+ +++   KG+ V  V+ G  H  A+    
Sbjct: 424 IVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESL--KGLCVRSVACGTWHTAAIIEVS 481

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   S+G ++TWG    G LGH D ++K +P  +S L  +  VQV   +  T  L 
Sbjct: 482 AERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALT 541

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
           + G V+  G   +G LG P   V D+ +   +   L+  +V  IS G YH  V+T  G +
Sbjct: 542 NMGKVFAMGSAKYGQLGNPH--VKDRAV--VVEGMLKQEYVKMISCGSYHVAVLTSSGSV 597

Query: 453 FGFGDNERAQLG 464
           + +G  E  +LG
Sbjct: 598 YTWGKGENGELG 609



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 22/274 (8%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCG-VLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           ++  G YHT  +++S  V++ G   C  ++  G   +Q ++  + + P     +  ++  
Sbjct: 360 KVACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTH-KFSLPVEGISISSIACG 418

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-- 230
           E H A V   G++FT GD +    GH + +     P+ VE+LKG+  + V  G   T   
Sbjct: 419 EWHTAIVSSCGRLFTYGDGTFGVLGHGNYH-SFSSPKEVESLKGLCVRSVACGTWHTAAI 477

Query: 231 ---------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
                    + T  G + T G    G+LGH D +++  P  ++ L +    VQ++ G   
Sbjct: 478 IEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDY-DFVQVSCGRMM 536

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALD 340
            LA+T  G V++ GS     LG+    D    RA+      K  +V  +S G  HV  L 
Sbjct: 537 TLALTNMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQEYVKMISCGSYHVAVLT 592

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           SSG VYTWGKG  G LG GD  ++  P  + +L+
Sbjct: 593 SSGSVYTWGKGENGELGLGDTENRYTPCFVEALR 626



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 69/163 (42%), Gaps = 19/163 (11%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  V+ G  H   +   G VY WG+G CG LG   ++D + P+ + SL      +V  
Sbjct: 304 LDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKKVAC 363

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH---------VS 434
            +  T  L D+G VY +G              SD V   RI      H          +S
Sbjct: 364 GEYHTCALTDSGDVYTWG----------KDSCSDLVDEGRIRSQWLTHKFSLPVEGISIS 413

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            I+ G +HT +V+  GRLF +GD     LGH        P E+
Sbjct: 414 SIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEV 456



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 18/217 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  +A G ++   VT  G VY +G G    LG     D   P+ + +     I V +V+ 
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSL--SDIRVKKVAC 363

Query: 332 GDEHVVALDSSGYVYTWGKGYCGAL-GHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKTF 389
           G+ H  AL  SG VYTWGK  C  L   G    + L    S     +++  +   +  T 
Sbjct: 364 GEYHTCALTDSGDVYTWGKDSCSDLVDEGRIRSQWLTHKFSLPVEGISISSIACGEWHTA 423

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV--- 446
           ++   G ++ +G   FG LG    G       P+ ++SL+   V  ++ G +HT  +   
Sbjct: 424 IVSSCGRLFTYGDGTFGVLG---HGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEV 480

Query: 447 --------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
                   T  G+LF +GD +  +LGH      L PT
Sbjct: 481 SAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPT 517



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 20/236 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQ-----CVSFTRINFPSA 163
           I  G +HT ++S+   +F+ G    GVLGHG       P+  +     CV          
Sbjct: 415 IACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHT 474

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +++VSA      +   +G++FT GD      GH D    +  P  V  L      QV+
Sbjct: 475 AAIIEVSAE--RFKYNTSTGKLFTWGDADEGRLGHADNVNKLV-PTCVSQLVDYDFVQVS 531

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G   T  LT  G V   GS  +GQLG+    DR     +  + +   V  I+ G  ++ 
Sbjct: 532 CGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV--VVEGMLKQEYVKMISCGSYHVA 589

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            +T +G VY++G G N  LG G+  +   P  ++  R + +    ++ G    VA+
Sbjct: 590 VLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDT--ITCGPSFTVAI 643



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 19/187 (10%)

Query: 102 HSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           H++ I+E SA         +Y+T   S   +F+ G +  G LGH     + V  T ++  
Sbjct: 473 HTAAIIEVSA------ERFKYNT---STGKLFTWGDADEGRLGHADNVNKLVP-TCVSQL 522

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVP 218
                VQVS        +   G+VF  G        +     P  + R V     LK   
Sbjct: 523 VDYDFVQVSCGRMMTLALTNMGKVFAMGSAK-----YGQLGNPHVKDRAVVVEGMLKQEY 577

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
            K ++ G      LT  G V+T G   +G+LG GDT +R TP  +  L +   V  I  G
Sbjct: 578 VKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRD-RQVDTITCG 636

Query: 279 PSYMLAV 285
           PS+ +A+
Sbjct: 637 PSFTVAI 643


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 139/278 (50%), Gaps = 14/278 (5%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  E   G     V  GL  T FL   G V+TCG N  GQLGH     R  P+ + 
Sbjct: 22  VIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKP--RKKPEHVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+    +V ++ G S+ LA+   G ++S+G GS+  LG     + ++ PR I+      
Sbjct: 80  ALD-AQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQ 380
           + + +V+ G  H  AL   G V++WG+   G LG   HG  I  + P+ + SL+     Q
Sbjct: 137 VQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSI--STPQIIQSLQGIPFAQ 194

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
           + A    +F +  +G+V+G+G   FG LG  D   +D+   P +L SLR+  V  +S G 
Sbjct: 195 LSAGGAHSFAITLSGAVFGWGRNKFGQLGLND--TNDRWF-PALLKSLRSQRVIYVSCGE 251

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            HT  +T  G +F FG     QLGH++    + P ++F
Sbjct: 252 DHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKVF 289



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R   F     V  V     H  F+L  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
             GH    +P  +P  V AL       V+ G + T  L  +G + + G  + GQLG  + 
Sbjct: 65  QLGHE---KPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNF 121

Query: 255 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 312
            +    P++I  L +V  + Q+A G  +  A++  G V+S+G      LG G     +  
Sbjct: 122 EECVRVPRNIKCLSDV-QIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ IQ+   +GI   ++SAG  H  A+  SG V+ WG+   G LG  D  D+  P  L S
Sbjct: 181 PQIIQSL--QGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   + V   +  T  L   G V+ FG  G+G LG      ++  + PR +  L  + 
Sbjct: 239 LRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTNHEINPRKVFELMGNI 295

Query: 433 VSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 464
           V+QIS G  HT+  T   G+++ FG     QLG
Sbjct: 296 VTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 13/295 (4%)

Query: 120 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           G  HT+ L+ + +V++CG +  G LGH     +      ++   A  +V VS  E+H   
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKPRKKPEHVVALD---AQIIVAVSGGESHTLA 98

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           +   GQ+F+ G  S    G  +    +  PR ++ L  V   QV  G   +  L+  G V
Sbjct: 99  LNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQV 158

Query: 239 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            + G N  GQLG   HG ++   TP+ I  L+ +    Q++AG ++  A+T +G V+ +G
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGI-PFAQLSAGGAHSFAITLSGAVFGWG 215

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                 LG  + +D   P  +++ R +   V+ VS G++H  AL   G V+T+G G  G 
Sbjct: 216 RNKFGQLGLNDTNDRWFPALLKSLRSQ--RVIYVSCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           LGH     +  P  +  L  ++  Q+ C R+        +G +Y FG  G G LG
Sbjct: 274 LGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 7/269 (2%)

Query: 106 IVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSA 163
           +V   A   + ++ G  HTL +++   +FS G    G LG      +CV   R I   S 
Sbjct: 78  VVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLN-NFEECVRVPRNIKCLSD 136

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
             + QV+    H+  + + GQVF+ G N     G       I  P+++++L+G+P  Q++
Sbjct: 137 VQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLS 196

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
           AG   +  +T+ G V   G N  GQLG  DT DR  P  +  L     V+ ++ G  +  
Sbjct: 197 AGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRS-QRVIYVSCGEDHTA 255

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSS 342
           A+T  G V++FG+G    LGH   + E+ PR +  F   G  V ++S G +H +A   SS
Sbjct: 256 ALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKV--FELMGNIVTQISCGRQHTLAFTPSS 313

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
           G +Y++G G  G LG     ++  P P+ 
Sbjct: 314 GKMYSFGLGGNGQLGTRSTCNRKSPAPVK 342


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 159/369 (43%), Gaps = 21/369 (5%)

Query: 117 ITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQ 168
           +  G  H+L +    S S V S G    G LGHG     +  Q V        ++ H   
Sbjct: 12  LACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHC-- 69

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
              +E   A      QV++ G       G  D  + +F P  + AL G     V  G   
Sbjct: 70  --GAEYSMAVAGGDKQVYSWGWGDFGRLGTGDV-KDVFIPCPLPALAGRRVASVACGDTH 126

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           T   T  G +   G N +GQ G G   D   P+ +  L+    VV +A G  + + VT  
Sbjct: 127 TLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGK-EVVAVACGAEHSMCVTSE 185

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G G    +G GE  D   P   +    +G+ V +V+ G  H +A+D  G +YTW
Sbjct: 186 GEVYCWGWGRYGNIGDGESQDRHLPTLAKGL--EGVKVAQVNCGWRHSIAVDEGGAMYTW 243

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G G    L  GD  D  +P+ + +++      V    R T      G ++  GW  FG  
Sbjct: 244 GWGAYAQLMQGDRKDHYVPKRVEAVQQ--VATVAGGWRHTMAADSQGRLFASGWNKFGQC 301

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
           G    G ++ V+R + +++L    V Q+ +G  HT+ VT  G+ F +G N   QLGH  +
Sbjct: 302 GV---GHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGM 358

Query: 469 RGCLEPTEI 477
           +    P E+
Sbjct: 359 QDSNSPVEL 367



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 7/169 (4%)

Query: 325 HVVRVSAGDEHVVAL---DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
            V+ ++ G  H +AL    S   V +WG+G  G LGHGD  D+  P+ + SL    A  V
Sbjct: 8   EVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSV 67

Query: 382 -CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
            C  +    V      VY +GW  FG LG  D  V D V  P  L +L    V+ ++ G 
Sbjct: 68  HCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGD--VKD-VFIPCPLPALAGRRVASVACGD 124

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
            HT+V T  G+LF FG N+  Q G  +++ CLEP  +   + +E   +A
Sbjct: 125 THTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVA 173



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 9/277 (3%)

Query: 117 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HTL+  +   +F+ G +  G  G G     C+    +       VV V+    H
Sbjct: 120 VACGDTHTLVATAEGQLFAFGRNQNGQCGLG-SIQDCLEPQLVTALQGKEVVAVACGAEH 178

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  V   G+V+  G       G  ++      P L + L+GV   QV  G   +  +   
Sbjct: 179 SMCVTSEGEVYCWGWGRYGNIGDGESQDRHL-PTLAKGLEGVKVAQVNCGWRHSIAVDEG 237

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G ++T G   + QL  GD  D   PK +  +++V +V   A G  + +A    G +  F 
Sbjct: 238 GAMYTWGWGAYAQLMQGDRKDHYVPKRVEAVQQVATV---AGGWRHTMAADSQGRL--FA 292

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           SG N     G  H+E   R  Q     G  VV+V +G +H +A+  +G  ++WG+   G 
Sbjct: 293 SGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQ 352

Query: 356 LGHGDEIDKTLPEPLSSL-KSHLAVQVCARKRKTFVL 391
           LGH    D   P  L++L +  +      R+ +  VL
Sbjct: 353 LGHSGMQDSNSPVELAALSRGGINTDALTRQAQPVVL 389


>gi|390335480|ref|XP_782620.3| PREDICTED: uncharacterized protein LOC577290 [Strongylocentrotus
           purpuratus]
          Length = 861

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 168/342 (49%), Gaps = 23/342 (6%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASEN 174
           I+ G  HT +++    V + G+   G LG G + T   S  R+   P  + V  V+    
Sbjct: 71  ISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATH-TSPQRLRLGPHDSQVAGVACGSR 129

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           H    L++G+ ++CG+N     G+    ++       P  +  +      QV+ G  FT 
Sbjct: 130 HTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQVLPHFLRPIMHRKVVQVSCGEKFTL 189

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           FL   G V  CG+N  GQLG+G   +  +PK   PL+   +V++IAAG  + LAVT  G 
Sbjct: 190 FLFESGQVAGCGANNFGQLGNGTRAEMVSPK---PLDNPENVIRIAAGSCHSLAVTATGE 246

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           +Y++G G   C   G + D+L     +T RR   +VV V+ G  H +AL ++G VY+WG 
Sbjct: 247 LYAWGMG-RAC---GSRRDDLLTPQRKTTRRS--NVVGVAGGSGHSLALTANGTVYSWGG 300

Query: 351 GYCGALGHGDEIDK-TLPEPLS--SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G  G LGHG+++     PE L+  +L   +A   C       +L D GS+Y   W     
Sbjct: 301 GVDGQLGHGEDVQYLAQPEALADGALPGRVAQVACGDSYSAALLGD-GSLY--MWGKSSH 357

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
           +   D+  S KV RP +  SL    ++ ++ G +HT  +T +
Sbjct: 358 VIQADQPSSQKVYRP-VGISLNGRSIAMVTCGSWHTAAITGK 398



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 5/160 (3%)

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL--SSLKSHLAVQVCA 383
           V  +S G  H   +     V TWG G  G LG GD+   T P+ L      S +A   C 
Sbjct: 68  VKHISCGSSHTAVVTGQDEVLTWGNGNSGQLGCGDKATHTSPQRLRLGPHDSQVAGVACG 127

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDR--GVSDKVLRPRILDSLRAHHVSQISTGLY 441
             R T V ++ G  Y  G   +  LG+  R     +  + P  L  +    V Q+S G  
Sbjct: 128 -SRHTVVWLENGRAYSCGNNFYVQLGYDFRVKNYKENQVLPHFLRPIMHRKVVQVSCGEK 186

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            T+ + + G++ G G N   QLG+ T    + P  +   E
Sbjct: 187 FTLFLFESGQVAGCGANNFGQLGNGTRAEMVSPKPLDNPE 226



 Score = 38.9 bits (89), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 9/138 (6%)

Query: 336 VVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPL------SSLKSHLAVQVCARKRKT 388
           V  LD   G + +WG G  G  GHG   +    E        S ++SH    +      T
Sbjct: 19  VTDLDQDRGLLLSWGCGEFGQHGHGGSGENVSSEGALVDHGDSLVRSHRVKHISCGSSHT 78

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
            V+     V  +G    G LG  D+       R R+        V+ ++ G  HTVV  +
Sbjct: 79  AVVTGQDEVLTWGNGNSGQLGCGDKATHTSPQRLRL--GPHDSQVAGVACGSRHTVVWLE 136

Query: 449 RGRLFGFGDNERAQLGHD 466
            GR +  G+N   QLG+D
Sbjct: 137 NGRAYSCGNNFYVQLGYD 154


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL   G  + WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++  G  + +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+  G    
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + + G+ F  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 117/252 (46%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
               F C G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+   P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYF-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+  P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   F P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4147

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4148 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSTDG 4204

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4205 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4262

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4263 GQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4322

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4323 GL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLVEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ ++        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLVEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4139

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4140 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4197

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4198 LAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 4257

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4258 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAW 4314

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4315 GSNSEGQLGLGHTNHVREPTLVTV 4338



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 108/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4052

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4170

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HT+ V TD   ++ FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 4219



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    +   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 162/328 (49%), Gaps = 12/328 (3%)

Query: 131 SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           +V+  G+++ G LG G  E  Q +    +++  ++ V Q +   +H   + + G++F+CG
Sbjct: 2   AVYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCG 61

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
           +N     GH     P  RP+ + +L+      V+ G   +  LT  G V + GSN+ GQL
Sbjct: 62  NNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQL 121

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           GH   L   T   +       +VVQIA+G  + LA+T +G ++S+G+     LG G   +
Sbjct: 122 GHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGE 181

Query: 310 E-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           + + P  +++    GI +  ++ G  H  A+  SG ++ WGK   G LG  D + +  P+
Sbjct: 182 KVVTPTLVKSL--AGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQ 239

Query: 369 PLSSLKSHLAVQV--CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
            L +L+ +L V+   C      F L   G V+  G   FG LG    G     + PR++ 
Sbjct: 240 QLKTLR-NLGVRYISCGDDFSAF-LTQEGGVFTCGAGTFGQLG---HGTCSNEILPRMVF 294

Query: 427 SLRAHHVSQISTGLYHTVV-VTDRGRLF 453
            L    ++QI+ G  HT+  V  RG+++
Sbjct: 295 ELMGSKITQIACGRRHTLAFVPSRGKIY 322



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 139/282 (49%), Gaps = 13/282 (4%)

Query: 202 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTP 260
           +  +  PR ++       +Q   G + T  LT  G + +CG+N HGQLGH  D L    P
Sbjct: 21  DEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNKRP 80

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTF 319
           + I+ LE    V  ++ G ++ LA+T  G V+S+GS S   LGH  +      PR I+T 
Sbjct: 81  QFISSLENY-IVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTI 139

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLA 378
             K   VV++++G  H +AL +SG +++WG    G LG G   +K + P  + SL     
Sbjct: 140 ATKT--VVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPI 197

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR--PRILDSLRAHHVSQI 436
             +      +F +  +G+++G+G   FG LG     ++D V R  P+ L +LR   V  I
Sbjct: 198 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLG-----LNDLVSRCFPQQLKTLRNLGVRYI 252

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           S G   +  +T  G +F  G     QLGH T    + P  +F
Sbjct: 253 SCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMVF 294



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 137/289 (47%), Gaps = 12/289 (4%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSA 171
           Q   G  HTLL++ +  +FSCG++  G LGH    T C+   R  F S+     V  VS 
Sbjct: 40  QAACGTSHTLLLTKDGKLFSCGNNDHGQLGHD---TDCLPNKRPQFISSLENYIVTHVSC 96

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H+  +   GQVF+ G NS    GH    +    PR+++ +      Q+ +G   +  
Sbjct: 97  GTTHSLALTNWGQVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLA 156

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           LT  G + + G+N +GQLG G T ++  TP  +  L  +  +  IA G ++  AV+ +G 
Sbjct: 157 LTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGI-PIAFIACGGNHSFAVSKSGA 215

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           ++ +G  +   LG  +      P+ ++T R  G+    +S GD+    L   G V+T G 
Sbjct: 216 IFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRY--ISCGDDFSAFLTQEGGVFTCGA 273

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVY 398
           G  G LGHG   ++ LP  +  L      Q+   +R T   V + G +Y
Sbjct: 274 GTFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 13/237 (5%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE----EVGSVVQIAAGPSYMLAVTGNGVVYS 293
           V+  G+  HG+LG G   D    + + P E       SV Q A G S+ L +T +G ++S
Sbjct: 3   VYCWGNTVHGELGLGGIEDE---QVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFS 59

Query: 294 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            G+  +  LGH        +P+ I +   +   V  VS G  H +AL + G V++WG   
Sbjct: 60  CGNNDHGQLGHDTDCLPNKRPQFISSL--ENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117

Query: 353 CGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
            G LGH  ++   T P  + ++ +   VQ+ + +  +  L ++G ++ +G  G+G LG  
Sbjct: 118 IGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLG 177

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
             G  +KV+ P ++ SL    ++ I+ G  H+  V+  G +FG+G N   QLG + L
Sbjct: 178 TTG--EKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDL 232



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 6/199 (3%)

Query: 97  LQSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF 155
           LQ+      I   +    +QI +G++H+L ++NS  +FS G++  G LG G    + V+ 
Sbjct: 127 LQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTP 186

Query: 156 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           T +   +   +  ++   NH+  V +SG +F  G N+    G  D     F P+ ++ L+
Sbjct: 187 TLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCF-PQQLKTLR 245

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQ 274
            +  + ++ G +F+ FLT  G V TCG+ T GQLGHG   +   P+ +   E +GS + Q
Sbjct: 246 NLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMV--FELMGSKITQ 303

Query: 275 IAAGPSYMLA-VTGNGVVY 292
           IA G  + LA V   G +Y
Sbjct: 304 IACGRRHTLAFVPSRGKIY 322



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 396 SVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           +VY +G    G LG    G+ D +VL PR +D   +  V Q + G  HT+++T  G+LF 
Sbjct: 2   AVYCWGNTVHGELGL--GGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFS 59

Query: 455 FGDNERAQLGHDT 467
            G+N+  QLGHDT
Sbjct: 60  CGNNDHGQLGHDT 72


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 141/281 (50%), Gaps = 9/281 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR+VE+L+G+    + AG 
Sbjct: 2261 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVVESLRGIEVVDIAAGG 2319

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T+ G +++ G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 2320 AHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 2378

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 2379 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 2436

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 2437 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 2496

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             G LG    G ++ + RPR++ +L+   +++++ G  HT+ 
Sbjct: 2497 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 2534



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 11/310 (3%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            +A  +++  AS   +A  +++ +VF  G N     G    ++ I  P   E L  +   Q
Sbjct: 1129 NAGSLIRKKASGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 1186

Query: 222  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGP 279
            V  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G 
Sbjct: 1187 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGG 1246

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             + +A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  A+
Sbjct: 1247 RHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAI 1304

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSV 397
             SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +R  +T  L D G V
Sbjct: 1305 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 1364

Query: 398  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
            + +G   FG LG   RG S+    P+ ++ L    V QI  G   ++ +T  G ++ +G 
Sbjct: 1365 FSWGDGDFGKLG---RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGR 1421

Query: 458  NERAQLGHDT 467
             +  +L  D+
Sbjct: 1422 GDFGELRPDS 1431



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ +  
Sbjct: 2247 PTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 2306

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV IAAG ++   +T  G +YS+G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 2307 LRGI-EVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 2365

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 2366 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 2425

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 2426 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 2482

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 2483 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 2511



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 150/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+    NS       DT      P+LV+ L      +V A 
Sbjct: 158 VTQIACAEKRFLILSRNGRVYVQAYNS-------DT----LGPQLVQGLASRNIVKVAAH 206

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V + G    G+LGHGDT+    PK I+ L  ++ G  VV IA G +
Sbjct: 207 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 266

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   D+  P  +     KG+ V+ VS  +GD   +A
Sbjct: 267 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL--KGLKVIDVSCGSGDAQTLA 324

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 325 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 384

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 385 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSN 441

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 442 DQCQ-HFDTLR 451



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 118/251 (47%), Gaps = 13/251 (5%)

Query: 233  TIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
            TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A G   + AVT  G
Sbjct: 1146 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVAGGSKSLFAVTVEG 1201

Query: 290  VVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             VY+ G  +N  LG G     +  PR I       +  V V +G  H +AL   G V++W
Sbjct: 1202 KVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSW 1261

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+G  G LGH   ++   P  + +LK+     +      +  +  +G +Y +G   +G L
Sbjct: 1262 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRL 1321

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHD 466
            G  D       L+P+++  L  H V Q++ G     T+ +TD G +F +GD +  +LG  
Sbjct: 1322 GHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1378

Query: 467  TLRGCLEPTEI 477
               GC  P  I
Sbjct: 1379 GSEGCNVPQNI 1389



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     +       VV ++A
Sbjct: 2259 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVVESLRGIEVVDIAA 2317

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A +  +G +++ G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 2318 GGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQT 2376

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 2377 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 2435

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 2436 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 2493

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 2494 DNDEGQLGDG 2503



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   VFS G    G LGHG       P+    +S  +    +  HVV ++
Sbjct: 207 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQ----AGKHVVHIA 262

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V+ G     
Sbjct: 263 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQ 321

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  +V++  G  + +A+T +
Sbjct: 322 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQFSIALTKD 380

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  VV V+AG  H +AL     V++W
Sbjct: 381 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVVDVAAGSTHCLALTEDSEVHSW 438

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T P+P
Sbjct: 439 GSN--DQCQHFDTLRITKPQP 457



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 2171 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 2226

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   +  V V++G +H +AL S G VY+WG+  
Sbjct: 2227 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAE 2286

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG  D
Sbjct: 2287 DGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGD 2346

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 2347 ---SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 2403

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 2404 CKVPMKI 2410



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY     S          D L P+ +Q    + I  V   +
Sbjct: 158 VTQIACAEKRFLILSRNGRVYVQAYNS----------DTLGPQLVQGLASRNIVKVAAHS 207

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G V++WG G  G LGHGD +    P+ +S+L    A    V +      
Sbjct: 208 DGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTY 267

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+ 
Sbjct: 268 SAAITAEGELYTWGRGNYGRLG---HGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLA 324

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 325 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 361



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 5/180 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+   L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 1246 GRHAMALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 1304

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 1305 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 1363

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++G G
Sbjct: 1364 VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGRG 1422



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 2371 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 2429

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 2430 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 2488

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 2489 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 2534



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       +V+V      + 
Sbjct: 317 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDIVKVRCGSQFSI 375

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 376 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSE 434

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 435 VHSWGSNDQCQ--HFDTLRITKPQPSALPGL-DTKHIVGIACGPAQSFA 480



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 5/144 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 2161 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2220

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   V +++  +G  H + ++  G
Sbjct: 2221 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 2277

Query: 451  RLFGFGDNERAQLGHDTLRGCLEP 474
             ++ +G+ E  +LGH     C  P
Sbjct: 2278 EVYSWGEAEDGKLGHGNRSPCDRP 2301



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 98/252 (38%), Gaps = 34/252 (13%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  I++S  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 1294 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 1352

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 1353 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALT 1411

Query: 234  IRGHVHTCGSNTHGQL-------GHGDTLDR-----------PTP--KSIAPLEEVGSVV 273
              G V T G    G+L         G+  DR           P P    ++P E    +V
Sbjct: 1412 KSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIV 1471

Query: 274  QIA--AGPSYMLAVTGNG-----VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
             I   +G S      G        VY++G   +   G+G      +P  +Q    +G  +
Sbjct: 1472 GIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKI 1529

Query: 327  VRVSAGDEHVVA 338
             RV+ G  H VA
Sbjct: 1530 TRVACGSSHSVA 1541


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 139/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +QV 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+   P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYF-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 153/333 (45%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++V+AG  H   L  SG ++ WG+   G LG  DE D+  P  L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLHDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +Q+AAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDYKKQASPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYFPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  QV AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   F P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDRYF-PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
 gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
          Length = 1914

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 131/280 (46%), Gaps = 16/280 (5%)

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           +E    +  +QV  GL     + +   V+T G  + GQLGHGD L R  P+ +  L+   
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKG-K 693

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           S+V+   G  + + V+ NG+V + G GSN CLGHG+     +PR I+      + V  +S
Sbjct: 694 SIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLL--SVDVRAIS 751

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
            G  HVVA+ S G V+ WG+G  G LG GDE D   P+ +   +     +V      T  
Sbjct: 752 CGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFIREVKCGVDGTMF 811

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-------------PRILDSLRAHHVSQIS 437
           L D GSV   G      LG   R    + ++             P ++ +L  H    ++
Sbjct: 812 LTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMA 871

Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            G +HT V+ + G+++ FG N   QLG    +    P E+
Sbjct: 872 VGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEV 911



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 149/331 (45%), Gaps = 24/331 (7%)

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRP 208
           T  ++ T I  P+   + QV+    H   V     V+T G+ S    GH D   R   +P
Sbjct: 627 TCAMTLTPIELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGR--SKP 684

Query: 209 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
            +VEALKG    +   G  F+ F++  G V TCG  ++G LGHGD +    P+ I PL  
Sbjct: 685 EMVEALKGKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLS 744

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
           V  V  I+ GP +++AV  +G V+++G G + CLG G++ D   P+ +Q    + + +  
Sbjct: 745 V-DVRAISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQI--SEPVFIRE 801

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALG---------------HGDEID-KTLPEPLSS 372
           V  G +  + L   G V   G      LG                  E+  + +P  + +
Sbjct: 802 VKCGVDGTMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRA 861

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L +H A+ +      T VLV+ G VY FG    G LG       D  +  + L S+    
Sbjct: 862 LTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDL-SISDKT 920

Query: 433 VSQISTG-LYHTVVVTDRGRLFGFGDNERAQ 462
           V+ ++ G ++  V +     LF +G   R +
Sbjct: 921 VTMLACGDMFTAVGINSENALFFWGTRYRPK 951



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 5/212 (2%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           + Q+A G  +M+ V     VY++G GS   LGHG+     +P  ++    KG  +VR   
Sbjct: 643 IRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEAL--KGKSIVRACC 700

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           GD   V +  +G V T G G  G LGHGD +  + P  +  L S     +         +
Sbjct: 701 GDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAISCGPHHVVAV 760

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
              G V+ +G    G LG  D    +    P+ +       + ++  G+  T+ +TD G 
Sbjct: 761 GSDGEVFAWGRGKHGCLGLGDE---EDHFSPQEVQISEPVFIREVKCGVDGTMFLTDMGS 817

Query: 452 LFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
           +   G+NE  +LG +  +G L   +  +Q++E
Sbjct: 818 VLACGNNENNKLGLNHRQGFLRAMKNLLQKVE 849



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 76/158 (48%), Gaps = 3/158 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           I + +V+ G EH+V +     VYTWG+G  G LGHGD + ++ PE + +LK    V+ C 
Sbjct: 641 IKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKSIVRACC 700

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
               +  + D G V   G    G LG  D   +    RPR+++ L +  V  IS G +H 
Sbjct: 701 GDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSAS---RPRLIEPLLSVDVRAISCGPHHV 757

Query: 444 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           V V   G +F +G  +   LG         P E+ I E
Sbjct: 758 VAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISE 795



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 101/248 (40%), Gaps = 20/248 (8%)

Query: 122 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVL 180
           +   +  N  V +CG    G LGHG   +   S  R+  P  +  V  +S   +H   V 
Sbjct: 704 FSVFVSDNGIVMTCGDGSNGCLGHGDWMS--ASRPRLIEPLLSVDVRAISCGPHHVVAVG 761

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             G+VF  G     C G  D     F P+ V+  + V  ++V  G++ T FLT  G V  
Sbjct: 762 SDGEVFAWGRGKHGCLGLGD-EEDHFSPQEVQISEPVFIREVKCGVDGTMFLTDMGSVLA 820

Query: 241 CGSNTHGQLG--HGDTLDRPTP----KSIAPLEEVGSVVQ---------IAAGPSYMLAV 285
           CG+N + +LG  H     R       K   P  +V +VV+         +A GP +   +
Sbjct: 821 CGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMAVGPHHTSVL 880

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGY 344
              G VY+FG      LG G       P  ++        V  ++ GD    V ++S   
Sbjct: 881 VEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGDMFTAVGINSENA 940

Query: 345 VYTWGKGY 352
           ++ WG  Y
Sbjct: 941 LFFWGTRY 948


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 127/253 (50%), Gaps = 5/253 (1%)

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           G   +Q   G   +  L   G VH+CG NT GQLG         P  I  LE +  V  +
Sbjct: 20  GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETL-LVGLV 78

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDE 334
           + G  + LAV   G V+++G+GS   LG  E  +++  P+ I+T    GI +++VS G  
Sbjct: 79  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTL--TGIKIIQVSCGHY 136

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G VY+WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 137 HSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 196

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +G+ +G+G    G L         +  +P  + +L++  V  IS G  HT V+T  G++F
Sbjct: 197 SGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVF 256

Query: 454 GFGDNERAQLGHD 466
            FGDN   QLG++
Sbjct: 257 TFGDNSCGQLGYN 269



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 14/299 (4%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A V Q +  E H+  +L  G V +CGDN+    G R   R   RP L++AL+ +    V+
Sbjct: 21  AEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREE-RPGLIKALETLLVGLVS 79

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG  +  ++  TPK I  L  +  ++Q++ G  + 
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGI-KIIQVSCGHYHS 138

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +G VYS+G  S   LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 139 LALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 196

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           SG  + WG    G L   G+   + +  P  + +LKS   + +      T VL   G V+
Sbjct: 197 SGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVF 256

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 456
            FG    G LG+          +   +D L    VSQI  G YHT+  V   G +  FG
Sbjct: 257 TFGDNSCGQLGYNPTAKKRGPQQVEGIDGL----VSQIDCGSYHTLAYVYTTGEVVSFG 311



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 14/288 (4%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SASENHAA 177
           R+  LL+S+ +V SCG +  G LG   +  +     R     A   + V   S  + H+ 
Sbjct: 31  RHSLLLLSDGTVHSCGDNTQGQLGRRGKPRE----ERPGLIKALETLLVGLVSCGKEHSL 86

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            V   G+VF  G  S    G  +    IF P+ ++ L G+   QV+ G   +  L+  G 
Sbjct: 87  AVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQ 146

Query: 238 VHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
           V++ G N+ GQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G  + +GS
Sbjct: 147 VYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGTSFGWGS 205

Query: 297 GSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            +   L   G+       +P +I     K + V+ +S G EH   L  +G V+T+G   C
Sbjct: 206 NNTGQLALSGNNTPVQRYKPHSIGAL--KSLDVIYISCGYEHTAVLTQNGKVFTFGDNSC 263

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G LG+     K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 264 GQLGYNPTAKKRGPQQVEGIDGLVSQIDCGSYHTLAYVYTTGEVVSFG 311


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 340
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 341 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 450
             +G V+  G   +G LG  +   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDIEDRKVPTTV 396



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 24/286 (8%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ A   +  +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P
Sbjct: 122 LVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGP 180

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                +  VS    H A +   GQ+FT GD S    GH D  + I  PR VE+L G+   
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTI 239

Query: 221 QVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V  G+  T  +              G + T G     +LGHGD   R  P  +A L + 
Sbjct: 240 AVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY 299

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVR 328
               ++A G S  + +T +G V++ G   N   G  G  + + +P  ++  +    HV++
Sbjct: 300 -DFYRVACGHSLTVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQ 354

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           ++ G  HV  L S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 355 IACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALR 400



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 365 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P  +S     L +  V      T ++   G ++ FG   FG LG  D      +  PR
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSISCPR 228

Query: 424 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 473 EPT 475
           +PT
Sbjct: 289 KPT 291



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 375
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 376 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           +++ G   TV +T  G+++  G++   QLG+
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGN 333



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 39/348 (11%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 173
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 174 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 285
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 286 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            +G    G LG  D  + D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--IEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 163
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 2/155 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  V  G  H   +  +G V+TWG+   G LGHG   D   P  + SL +     V  
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYH 442
            +  T  +  TG +Y +G  G  ++G    G       PR I   L    ++ +S G +H
Sbjct: 137 GEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWH 195

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T ++T  G+LF FGD     LGH  L+    P E+
Sbjct: 196 TALITSMGQLFTFGDGSFGVLGHGDLKSISCPREV 230



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 340 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 451 RLFGFGD--NERAQLGHDTLRGCLEPTEI 477
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 17/349 (4%)

Query: 106  IVETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
            +   S     Q+  G+  T +I +N +V +CG    G LG G      V  T I+     
Sbjct: 4020 VAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGF 4078

Query: 165  HVVQV---SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
             V Q+     S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q
Sbjct: 4079 VVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQ 4137

Query: 222  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGP 279
            ++ G   +  +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G 
Sbjct: 4138 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGL 4194

Query: 280  SYMLAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            ++ +AV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VA
Sbjct: 4195 NHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVA 4252

Query: 339  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            L   G+VYT+G+     L  G   +   P+ +  L       +      T  L  TG VY
Sbjct: 4253 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVY 4312

Query: 399  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             +G    G LG    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 4313 AWGSNSEGQLGL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4358



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 152/327 (46%), Gaps = 13/327 (3%)

Query: 158  INFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
            +  PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G
Sbjct: 4020 VAAPSFSQAQQVVCGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQG 4077

Query: 217  VPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
                Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVV 4136

Query: 274  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            Q++ G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G 
Sbjct: 4137 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGL 4194

Query: 334  EHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
             H VA+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L 
Sbjct: 4195 NHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALT 4254

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
              G VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ ++  G +
Sbjct: 4255 KDGHVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDV 4311

Query: 453  FGFGDNERAQLGHDTLRGCLEPTEIFI 479
            + +G N   QLG        EPT I +
Sbjct: 4312 YAWGSNSEGQLGLGHTNHVREPTLITV 4338



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVSIQQISA 725



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P     AP        Q+  G +    +  NG V + G 
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVPV---AAP--SFSQAQQVVCGQNCTFVIQANGTVLACGE 4052

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4053 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4112

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4113 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 4170

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 464
            S+K L P  + +L  + + Q++ GL HTV V TD   ++ FGD +  +LG
Sbjct: 4171 SNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4219



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P+++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 4054

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4112 KLGHGNSDRQRRPRQIEALQGEE 4134



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 165/349 (47%), Gaps = 20/349 (5%)

Query: 107 VETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--- 162
           + TS G+  QI  G+Y T +I  +  V +CG    G LG G  T Q     R+NF +   
Sbjct: 390 LATSFGSAQQIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQ-TQLKRLNFDNECL 448

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG---VPC 219
              V     S+ H   +   G+V++ GD      GH ++      P+LVE   G   V C
Sbjct: 449 VKSVSSSKGSDGHTLALTLDGKVYSWGDGDYGKLGHGNSQTQKI-PKLVEGALGNKVVCC 507

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
             + AG   +  +T  G ++T G   +G+LGHGD   R  P  +   ++V +V Q+A G 
Sbjct: 508 --IAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQV---KDVANVGQVACGS 562

Query: 280 SYMLAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
           ++ + V+ +G  V+SFGSG N  LGH + +   +P+ I+    +G+ + +V  G +  +A
Sbjct: 563 AHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEAL--QGMVIRKVCCGSQCSLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           L S+G VY WG G     G  D    T P+ L +L+SH  V +         L    +VY
Sbjct: 621 LTSTGQVYVWGCGPSLGTGSVDATSAT-PKLLLALQSHSVVDISVGDSHCVALTQDNNVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            +G    G  G      +  + +P+ +  L    V QIS G  HTV  T
Sbjct: 680 AWGNNSMGQCG--QGHCTTPITKPKKVLGLDGVAVHQISAGTSHTVAWT 726



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 150/345 (43%), Gaps = 22/345 (6%)

Query: 128 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
           SN  V+  GS+    L  G      V     +F SA    Q+ A +     +   G V  
Sbjct: 362 SNEEVYVWGSNSSHQLAEGSMDKILVPKLATSFGSAQ---QIEAGQYCTFVIFPDGFVHA 418

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           CG  S    G  D+       RL    E L         +  + T  LT+ G V++ G  
Sbjct: 419 CGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGH-TLALTLDGKVYSWGDG 477

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
            +G+LGHG++  +  PK +        V  IAAG  +  AVT +G +Y++G G    LGH
Sbjct: 478 DYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGH 537

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEID 363
           G+ +    P  ++     G    +V+ G  H V +   G  V+++G G  G LGH D   
Sbjct: 538 GDNNSRNVPVQVKDVANVG----QVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNR 593

Query: 364 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW---MGFGSLGFPDRGVSDKVL 420
              P+ + +L+  +  +VC   + +  L  TG VY +G    +G GS       V     
Sbjct: 594 VYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGS-------VDATSA 646

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            P++L +L++H V  IS G  H V +T    ++ +G+N   Q G 
Sbjct: 647 TPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWGNNSMGQCGQ 691


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 128/251 (50%), Gaps = 8/251 (3%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGH----GDTLDRPTPKSIAPLEEVGSVVQIAA 277
           V  G   T  L   G V +CG N+ GQLG     G       P+ I  LE    VV ++ 
Sbjct: 42  VACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALE-TQKVVHVSC 100

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  + LAV   G VYS+G+G+   LG GE  D L P+ I    +    V++V+ G +H +
Sbjct: 101 GKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSK--YKVIQVACGHDHSI 158

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
           AL + G +++WG+   G LG G +I  +  P+ +S+L      QV A    +F L  +G 
Sbjct: 159 ALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGV 218

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           VYG+G      LG       +++ +P  + +LR+  V+ +S G  HT V+T  G ++ FG
Sbjct: 219 VYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFG 278

Query: 457 DNERAQLGHDT 467
           D+   QLG ++
Sbjct: 279 DDSAGQLGRNS 289



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 14/304 (4%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGV 217
           P+   VV V+  E H   +   G V +CGDNS    G R      +  + P L++AL+  
Sbjct: 34  PADQAVVLVACGERHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQ 93

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
               V+ G   +  +  +G V++ G+ T GQLG G+  DR  PK+I  L +   V+Q+A 
Sbjct: 94  KVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKY-KVIQVAC 152

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + +A+T +G ++S+G   +  LG G+    +  P+ +      GI + +V+AG  H 
Sbjct: 153 GHDHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSAL--DGIPLAQVAAGGAHS 210

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKT---LPEPLSSLKSHLAVQVCARKRKTFVLVD 393
            AL  SG VY WG+     LG      K     P  +++L+S     V      T VL  
Sbjct: 211 FALSLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQ 270

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRL 452
            GSVY FG    G LG      S     P+ ++ +    VS ++ G YHT+V ++  G+L
Sbjct: 271 NGSVYTFGDDSAGQLG--RNSSSSPKFGPQKVEWIDG-PVSLLACGSYHTLVRISTSGQL 327

Query: 453 FGFG 456
             FG
Sbjct: 328 LSFG 331



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 117/238 (49%), Gaps = 19/238 (7%)

Query: 238 VHTCGSNTHGQLG-------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           ++  G  + GQLG        G    RP P+  AP ++  +VV +A G  + L +  +G 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPR--APADQ--AVVLVACGERHTLLLRDDGG 57

Query: 291 VYSFGSGSNFCLGH----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
           V S G  S   LG     G++     P  IQ    +   VV VS G EH +A+ + G VY
Sbjct: 58  VASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQ--KVVHVSCGKEHSLAVCNKGRVY 115

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           +WG G  G LG G+  D+ +P+ +++L  +  +QV      +  L + G ++ +G    G
Sbjct: 116 SWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHG 175

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            LG   + +S +   P+ + +L    ++Q++ G  H+  ++  G ++G+G N   QLG
Sbjct: 176 QLGL-GKDISSQA-SPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLG 231



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 11/243 (4%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + ++ G+ H+L + N   V+S G+   G LG G    + +  T IN  S   V+QV+   
Sbjct: 96  VHVSCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKT-INALSKYKVIQVACGH 154

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +H+  +   G++F+ G N     G          P+ V AL G+P  QV AG   +  L+
Sbjct: 155 DHSIALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALS 214

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           + G V+  G N   QLG      +     P SIA L  +  V  ++ G  +   +T NG 
Sbjct: 215 LSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSL-DVAFVSCGAEHTAVLTQNGS 273

Query: 291 VYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYTW 348
           VY+FG  S   LG +     +  P+ ++        V  ++ G  H +V + +SG + ++
Sbjct: 274 VYTFGDDSAGQLGRNSSSSPKFGPQKVEWIDGP---VSLLACGSYHTLVRISTSGQLLSF 330

Query: 349 GKG 351
           G+G
Sbjct: 331 GRG 333



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 7/139 (5%)

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLS----SLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           +Y WG+G  G LG G     + P P      +      V V   +R T +L D G V   
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 401 GWMGFGSLG--FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           G    G LG   P  G   +   P ++ +L    V  +S G  H++ V ++GR++ +G  
Sbjct: 62  GDNSRGQLGRRLPS-GQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAG 120

Query: 459 ERAQLGHDTLRGCLEPTEI 477
              QLG   L   L P  I
Sbjct: 121 TFGQLGTGELGDRLIPKTI 139


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 143/308 (46%), Gaps = 12/308 (3%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
           F     +VQV   ENH   V++ G++F+ G N     GH    R   R   V+ L+    
Sbjct: 30  FTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGH---CRSRTRAEPVDGLEAHNI 86

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
            QV  G   T      G V   GSN++GQLG + +    PTPK +  L     VVQIA G
Sbjct: 87  TQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLA-TKQVVQIACG 145

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
            S+ +A+T  G +Y +GS S+  LG G     E +P  ++    +GI +  +S G +   
Sbjct: 146 RSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLL--QGIPISHISCGADFSF 203

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           A+  SG VY WGK   G LG GD  D+  P  L SL+      +      T  L   G V
Sbjct: 204 AVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGV 263

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 456
           + FG   +G LG      S   + PR +  L    V+QI  G  HT+  V  +GR++ FG
Sbjct: 264 FTFGAGMYGQLG---HCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFG 320

Query: 457 DNERAQLG 464
                QLG
Sbjct: 321 LGGSGQLG 328



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 5/250 (2%)

Query: 110 SAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 168
            A N  Q+  G  HTL  +    VF+ GS+  G LG   E +   +   +   +   VVQ
Sbjct: 82  EAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQ 141

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           ++   +H+  +   G+++  G NS    G   +  P  +P LV+ L+G+P   ++ G +F
Sbjct: 142 IACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADF 201

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  +T  G V+  G N+ GQLG GDT DRP P  +  L     V  I  G  +  A+T +
Sbjct: 202 SFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSL-RFQRVTYIRCGMDHTAALTRD 260

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYT 347
           G V++FG+G    LGH    +E+ PR +      G  V ++  G  H +A + S G +Y 
Sbjct: 261 GGVFTFGAGMYGQLGHCTSANEMLPRKV--LELMGTTVTQICCGRCHTLAFVPSKGRIYA 318

Query: 348 WGKGYCGALG 357
           +G G  G LG
Sbjct: 319 FGLGGSGQLG 328



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 10/260 (3%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           QV  G N T  +   G + + G N +GQLGH  +  R  P       E  ++ Q+A G  
Sbjct: 38  QVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPVDGL---EAHNITQVACGAQ 94

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           + LA    G V+++GS SN  LG   +   +  P+ +++   K   VV+++ G  H +AL
Sbjct: 95  HTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATK--QVVQIACGRSHSMAL 152

Query: 340 DSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            + G +Y WG    G LG G     +T P  +  L+      +      +F +  +G+VY
Sbjct: 153 TNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVY 212

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           G+G   FG LG  D   +D+  +P  L SLR   V+ I  G+ HT  +T  G +F FG  
Sbjct: 213 GWGKNSFGQLGLGD--TTDRP-QPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAG 269

Query: 459 ERAQLGHDTLRGCLEPTEIF 478
              QLGH T    + P ++ 
Sbjct: 270 MYGQLGHCTSANEMLPRKVL 289



 Score = 38.5 bits (88), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 28/58 (48%)

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
           +  PR         + Q+  G  HT++V   G+LF FG N+  QLGH   R   EP +
Sbjct: 22  ITSPRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEPVD 79


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 116/241 (48%), Gaps = 6/241 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V + G    GQLG GDT D+  P  +  L  VG +  +  G  +  AV  NG +Y++G G
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LGHG +     PR ++     G+ +V ++ G  H   + S G +YTWG    G  G
Sbjct: 61  MYGKLGHGNESGHSTPRRVEAL--VGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAG 118

Query: 358 HGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           HGD E  +  P+ L  L     VQ+ A    T  L D    + +G   FG LG    G  
Sbjct: 119 HGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLG---NGTE 175

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
                PR+++SL   +  Q++ G +H+ V+T  G+++ FG  E  QLGH      L+PT 
Sbjct: 176 RNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTL 235

Query: 477 I 477
           +
Sbjct: 236 V 236



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 118/247 (47%), Gaps = 8/247 (3%)

Query: 207 RPRLVEALKGVPC-KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P  V+AL+GV     VT G   T  +   G ++T G   +G+LGHG+     TP+ +  
Sbjct: 22  EPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEA 81

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 324
           L  + S+V IA G  +   VT  G +Y++G   N   GHG+ +  +  P+ ++  R  G 
Sbjct: 82  LVGL-SIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLE--RLNGK 138

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
            VV++SA   H   L      + WG+G  G LG+G E +   P  + SL      QV   
Sbjct: 139 KVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVACG 198

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              + V+   G +Y FG    G LG  D+      L+P ++++L    V QI+ G  H+V
Sbjct: 199 GFHSAVITRDGKMYTFGGGEHGQLGHADK---VNKLKPTLVEALDGVVVKQITCGWSHSV 255

Query: 445 VVTDRGR 451
            +T  G 
Sbjct: 256 ALTSEGE 262



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 112/230 (48%), Gaps = 7/230 (3%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
            +T G YHT  + SN  +++ G  + G LGHG E+       R+       +V ++    
Sbjct: 37  HVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTP-RRVEALVGLSIVDIACGSR 95

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V   G ++T GD  +   GH DT    + P+L+E L G    Q++A    T  LT 
Sbjct: 96  HTAVVTSKGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTD 155

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYS 293
                  G    G+LG+G   +  +P+ I  L  +G    Q+A G  +   +T +G +Y+
Sbjct: 156 DHETFAWGEGKFGRLGNGTERNCHSPRLIESL--IGKYPCQVACGGFHSAVITRDGKMYT 213

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           FG G +  LGH ++ ++L+P  ++     G+ V +++ G  H VAL S G
Sbjct: 214 FGGGEHGQLGHADKVNKLKPTLVEAL--DGVVVKQITCGWSHSVALTSEG 261



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 119/268 (44%), Gaps = 5/268 (1%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           VFS G    G LG G  + Q              +  V+    H A V  +G ++T G  
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
                GH + +     PR VEAL G+    +  G   T  +T +G ++T G   +G  GH
Sbjct: 61  MYGKLGHGNESGH-STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGH 119

Query: 252 GDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 310
           GDT   + TPK +  L     VVQ++A   +   +T +   +++G G    LG+G + + 
Sbjct: 120 GDTEGHQYTPKLLERLNGK-KVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTERNC 178

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
             PR I++   K  +  +V+ G  H   +   G +YT+G G  G LGH D+++K  P  +
Sbjct: 179 HSPRLIESLIGK--YPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLV 236

Query: 371 SSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +L   +  Q+      +  L   G  +
Sbjct: 237 EALDGVVVKQITCGWSHSVALTSEGEYH 264


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 160/345 (46%), Gaps = 39/345 (11%)

Query: 142 VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 201
           + G GP+    +S   I         Q+  S+     + Q+G+VF    +S   C     
Sbjct: 457 IFGVGPQNCDTLSELTIK--------QICCSDRTILILTQTGKVFFMYYSSDTQC----- 503

Query: 202 NRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 258
                 P+ + AL      ++ A   G ++   LT    V++ G+   G+LGHGDT  + 
Sbjct: 504 ------PQEMTALDDKEVIKIAAHPEGKHYLA-LTKDYEVYSWGNGDGGRLGHGDTSTKE 556

Query: 259 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 318
            P  I  L+    ++ +  G +Y  A++ NG +Y++G G+   LGHG   D L P  I  
Sbjct: 557 EPTLIQALKG-KDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISA 615

Query: 319 FRRKGIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
              +  H+++V+ G    H + + S G VY+WG G  G LG G      LP  +  L++ 
Sbjct: 616 LSDE--HIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV 673

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
             VQV    + +  L + G VY +G      LG P     + V  P +++ LR   V  +
Sbjct: 674 KIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHP---TEENVRFPEMVEVLRDRKVVGV 730

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           S G+ H + +TD+G ++G+G NE  Q+         + +E+F+Q+
Sbjct: 731 SLGVSHVLALTDQGEVYGWGKNENKQI--------CDSSELFVQQ 767



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 7/276 (2%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G+++  L  +  V+S G+   G LGHG  +T+    T I       ++ V     ++A +
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK-EEPTLIQALKGKDIIDVECGGTYSAAI 582

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGH 237
             +G ++T G  +    GH  T      P ++ AL      +V  G  +   L I  +G 
Sbjct: 583 SANGALYTWGRGNYGRLGH-GTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGK 641

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V++ G   +G+LG G +     P+ I  L+ V  +VQ+  G  + +A++ +G VY++G G
Sbjct: 642 VYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNV-KIVQVYCGAQFSVALSEDGHVYTWGKG 700

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             + LGH  + +   P  ++  R +   VV VS G  HV+AL   G VY WGK     + 
Sbjct: 701 EGWKLGHPTEENVRFPEMVEVLRDR--KVVGVSLGVSHVLALTDQGEVYGWGKNENKQIC 758

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
              E+    P  + +LK    V VC    ++F   D
Sbjct: 759 DSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTD 794


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 163/343 (47%), Gaps = 22/343 (6%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G +H+ +I++S  +   G   CG LG G    + +   R+   S  +V+ VS S+ 
Sbjct: 46  EVCCGGHHSAVITHSGELIVWGYGGCGQLGLGD--LKDIVIPRV-MTSIKNVINVSCSDR 102

Query: 175 HAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           H+A +L+ G+++T G N S   G         N  I  P+LVE L      +V+ G   T
Sbjct: 103 HSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHT 162

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT     +T G    G+LGHGDT D  TPK I  L  + SV  I  G  +   +  NG
Sbjct: 163 ACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGL-SVKNIVCGGHHTAILLNNG 221

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
            VY  G G+   LG G + D   P+ +Q +   K I    VS G +H   + + G VYTW
Sbjct: 222 KVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSIK--EVSLGYQHSAVITTKGKVYTW 279

Query: 349 GKGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           G+G  G LGH   G E D   P+ +  L S +AV +      T V+ + G VY +G    
Sbjct: 280 GQG--GRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRN 337

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
              G  D   +D  L P     L+  ++ Q+S G  HT+ ++D
Sbjct: 338 LGHGVIDSKPNDPTLHP----ILQNKNIVQVSCGKTHTIALSD 376



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 126/268 (47%), Gaps = 18/268 (6%)

Query: 206 FRPRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
             P+L+E+L      K+V  G + +  +T  G +   G    GQLG GD  D   P+ + 
Sbjct: 30  IEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMT 89

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ------PRAIQT 318
            ++   +V+ ++    +  A+  +G +Y++G   +  LG G  +  L       P+ ++ 
Sbjct: 90  SIK---NVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEK 146

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
              +   V++VS G  H   L      YTWG G  G LGHGD  D   P+ + SL     
Sbjct: 147 LLNE--KVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSV 204

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQIS 437
             +      T +L++ G VY  G   FG LGF   G  + +  P++L  SL    + ++S
Sbjct: 205 KNIVCGGHHTAILLNNGKVYFCGGGAFGKLGF---GSKEDIYIPKLLQGSLTNKSIKEVS 261

Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            G  H+ V+T +G+++ +G   R  LGH
Sbjct: 262 LGYQHSAVITTKGKVYTWGQGGR--LGH 287



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 149/334 (44%), Gaps = 15/334 (4%)

Query: 130 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           S V + GSS  G LG   E +        +  S   + +V    +H+A +  SG++   G
Sbjct: 8   SGVVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWG 67

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
                  G  D  + I  PR++ ++K V    V+     +  +   G ++T G N  G+L
Sbjct: 68  YGGCGQLGLGDL-KDIVIPRVMTSIKNVI--NVSCSDRHSAAILEDGRLYTWGCNKSGKL 124

Query: 250 GHGDTLDRP------TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
           G G            TP+ +  L     V++++ G  +   +T     Y++G G    LG
Sbjct: 125 GIGSLNVNLNNNIICTPQLVEKLLN-EKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLG 183

Query: 304 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
           HG+ +D   P+ I++    G+ V  +  G  H   L ++G VY  G G  G LG G + D
Sbjct: 184 HGDTNDVYTPKLIESLA--GLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKED 241

Query: 364 KTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
             +P+ L  SL +    +V    + + V+   G VY   W   G LG    G    +L P
Sbjct: 242 IYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYT--WGQGGRLGHIYNGPEPDILSP 299

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           ++++ L +     IS G  HTVV+++ G ++ +G
Sbjct: 300 KLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWG 333


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 138/254 (54%), Gaps = 16/254 (6%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           ++V+ G   T +L   G + +CG N +GQLG     +  + + I+ LE   ++V I+ G 
Sbjct: 37  QKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKS--NNSSIEQISSLE-AQTIVDISCGT 93

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVV 337
           ++ +AV+  G +YS+G GS   LG G        P+ I   F  K   ++++S G+ H +
Sbjct: 94  NHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTK---IIQISCGNFHSL 150

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
           AL   G V++WG+  CG LG G +I ++  P+ + SLK    VQV A   ++F L  +G+
Sbjct: 151 ALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGT 210

Query: 397 VYGFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           V+ +G    G LGF   P +G      +P  ++SLR   V+ IS G  HT V++  G ++
Sbjct: 211 VFAWGKNNAGQLGFKSDPMKGT----FKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVY 266

Query: 454 GFGDNERAQLGHDT 467
            FGD+   QLG ++
Sbjct: 267 TFGDDTHGQLGQNS 280



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 21/314 (6%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
           F S   V +VS  E H  ++L+ G + +CG N     G +  N  I     + +L+    
Sbjct: 30  FQSQECVQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNSSI---EQISSLEAQTI 86

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAG 278
             ++ G N +  ++  G +++ G  + GQLG G+   R  TPK I  L     ++QI+ G
Sbjct: 87  VDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNT-KIIQISCG 145

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
             + LA++ +G V+S+G      LG G Q  ++  P+ +++   KGI +V+V+AG     
Sbjct: 146 NFHSLALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSL--KGIPLVQVTAGGSQSF 203

Query: 338 ALDSSGYVYTWGKGYCGALG-HGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
           AL  SG V+ WGK   G LG   D +  T  P  ++SL++     +   +  T VL   G
Sbjct: 204 ALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDG 263

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           SVY FG    G LG   +   ++   P+ ++   A  VSQ++ G YHT+       L+ F
Sbjct: 264 SVYTFGDDTHGQLG---QNSGNQTSVPQKIEDY-AGQVSQVACGRYHTL-------LYVF 312

Query: 456 GDNERAQLGHDTLR 469
             N     G  +LR
Sbjct: 313 SCNRIVSFGKGSLR 326



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 133/290 (45%), Gaps = 10/290 (3%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +++ G  HTL L+ + ++ SCG +  G LG     +   S  +I+   A  +V +S   N
Sbjct: 38  KVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNS---SIEQISSLEAQTIVDISCGTN 94

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  V   G +++ GD S    G  + +   F P+ +  L      Q++ G   +  L+ 
Sbjct: 95  HSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSE 154

Query: 235 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            G V + G N  GQLG G   +++ TP+ +  L+ +  +VQ+ AG S   A++ +G V++
Sbjct: 155 DGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGI-PLVQVTAGGSQSFALSMSGTVFA 213

Query: 294 FGSGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +G  +   LG      +   +P A+ + R  G  V  +S G+EH   L   G VYT+G  
Sbjct: 214 WGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLG--VAYISCGEEHTAVLSKDGSVYTFGDD 271

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G LG       ++P+ +      ++   C R      +     +  FG
Sbjct: 272 THGQLGQNSGNQTSVPQKIEDYAGQVSQVACGRYHTLLYVFSCNRIVSFG 321



 Score = 42.7 bits (99), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 17/131 (12%)

Query: 345 VYTWGKGYCG--ALGHGDEIDKTLPEPLSSLKSHLAVQVCARK-----RKTFVLVDTGSV 397
           +Y WG    G  AL  G++      E       +   Q C +K     + T  L++ G++
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKE-----NDYFQSQECVQKVSCGEKHTLYLLEDGTL 55

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
              G   +G LG      S + +      SL A  +  IS G  H+V V+D G ++ +GD
Sbjct: 56  LSCGQNPYGQLGRKSNNSSIEQI-----SSLEAQTIVDISCGTNHSVAVSDEGSIYSWGD 110

Query: 458 NERAQLGHDTL 468
               QLG   L
Sbjct: 111 GSEGQLGTGNL 121


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 140/276 (50%), Gaps = 10/276 (3%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG  G +     PR I++     
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVC 382
           I +V+V+ G  H +AL  +  V+ WG+   G LG G +  K   P+ + SL     +Q+ 
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIA 196

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR   +  I  G  H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRTQKIVYICCGEDH 253

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           T  +T  G +F FG     QLGH++    + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/333 (30%), Positives = 154/333 (46%), Gaps = 13/333 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG  G 
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
                 P++I  L ++  +VQ+A G  + LA++    V+ +G      LG G +   +  
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ I++    GI  ++++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L S
Sbjct: 181 PQLIKSLL--GIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L++   V +C  +  T  L   G V+ FG  G+G LG      +   + PR +  L    
Sbjct: 239 LRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295

Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             GQV+  G +S    G   +   I  PR +++L  +   QV  G   +  L+    V  
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160

Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +GQLG G D   + +P+ I  L  +   +QIAAG ++   +T +G ++ +G    
Sbjct: 161 WGQNKYGQLGLGIDCKKQASPQLIKSLLGI-PFMQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG  +++D   P  +++ R + I  V +  G++H  AL   G V+T+G G  G LGH 
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277

Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               +  P  +  L   +  Q+ C R+  +  +  +G +Y FG  G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
            R I   S   +VQV+    H+  + ++ +VF  G N     G     +    P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSL 187

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G+P  Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V 
Sbjct: 188 LGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR-TQKIVY 246

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           I  G  +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304

Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%), Gaps = 18/252 (7%)

Query: 70  IYA-GMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS 128
           +YA G+  + Q+ LL       +  +R  ++++  SDI        +Q+  G YH+L +S
Sbjct: 105 VYAWGLDSDGQLGLLGS-----EECIRVPRNIKSLSDI------QIVQVACGYYHSLALS 153

Query: 129 NSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            +S VF  G +  G LG G +  +  S   I        +Q++A   H+  +  SG +F 
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +G
Sbjct: 214 WGRNKFGQLGLNDENDR-YVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYG 272

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHG 305
           QLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG G
Sbjct: 273 QLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTG 330

Query: 306 EQHDELQPRAIQ 317
              +   P  ++
Sbjct: 331 STSNRKSPFTVK 342


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 169/359 (47%), Gaps = 20/359 (5%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT++++ N  +F+ G++  G LG G   T+    T +       +  V+A   H
Sbjct: 40  IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTT-VKALKPEKITHVAAGRFH 98

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V  S ++++ G  S    GH D    +  P  +E+L+      +  G   +  +T  
Sbjct: 99  TLAVTDSNKLYSFGQGSEGALGHGDET-DLNMPTSIESLEDKDVNIIACGGYHSAAITKN 157

Query: 236 GHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G ++  GSN+ GQLG   DT+  PT      L+   SV+ +A G  +   VT +G +Y+F
Sbjct: 158 GELYIWGSNSEGQLGLKNDTISYPTM-----LDLGKSVISVACGYYHTAVVTADGKLYTF 212

Query: 295 GS--GSNFCLGHGEQHDELQPRAIQTFRRKGI--HVVRVSAGDEHVVALDSSGYVYTWGK 350
           G   G    LG  E H   +P+ +     KGI   VV+V+ G  H VAL +SG VYT+G 
Sbjct: 213 GETEGGKLGLGDIEAHKVTKPKVV-----KGISGKVVKVACGGNHTVALTASGQVYTFGS 267

Query: 351 GYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           G  G LG G +I D  +P+ + +L       +   +  T V+ D G ++ FG    G LG
Sbjct: 268 GQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLG 327

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
             D   S+ + +P  +  L+   V  I+ G  HT+V  ++      GD++     +D +
Sbjct: 328 QGDESFSN-LFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGDDDNESSSNDEV 385



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 166/351 (47%), Gaps = 25/351 (7%)

Query: 147 PETTQCVSFTRINFPS---------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 197
           PET    +F +  F           +  V  ++  + H   V ++G++FT G+N     G
Sbjct: 9   PETGAVFTFGKSRFGDNRTNKFWIRSDKVTDIACGDEHTVVVTENGRLFTFGNNEWGQLG 68

Query: 198 HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 257
              +N+   +P  V+ALK      V AG   T  +T    +++ G  + G LGHGD  D 
Sbjct: 69  I-GSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDL 127

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
             P SI  LE+   V  IA G  +  A+T NG +Y +GS S   LG   ++D +   +  
Sbjct: 128 NMPTSIESLED-KDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGL--KNDTI---SYP 181

Query: 318 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDK-TLPEPLSSLKS 375
           T    G  V+ V+ G  H   + + G +YT+G+   G LG GD E  K T P+ +  + S
Sbjct: 182 TMLDLGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGI-S 240

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
              V+V      T  L  +G VY FG    G LG   + +   +  P+++++L    +  
Sbjct: 241 GKVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNI--PKLVEALSKRKIKH 298

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH--DTLRGCLEPTEIFIQEMEE 484
           I+ G  HT VV+D+G LF FGD    +LG   ++     +P  + +Q ++E
Sbjct: 299 IACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKP--VKVQRLKE 347



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 13/99 (13%)

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           + +TG+V+ FG   FG         ++K         +R+  V+ I+ G  HTVVVT+ G
Sbjct: 8   IPETGAVFTFGKSRFGD------NRTNKFW-------IRSDKVTDIACGDEHTVVVTENG 54

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
           RLF FG+NE  QLG  + +   +PT +   + E+ T +A
Sbjct: 55  RLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVA 93


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 10/271 (3%)

Query: 208 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           P L+E+++ V  K+V   +G      L+  G V + G    G+LGHG+      P+ I  
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIES 437

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
           L     VV IAAG ++   +T  G ++++G G    LGHG+  D+++P+ ++    KG+ 
Sbjct: 438 LRG-KEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEAL--KGVR 494

Query: 326 VVRVS--AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           V+ V+  +GD   + +     V++WG G  G LG G      +P+ + +L     V+V  
Sbjct: 495 VIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVEC 554

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
             + +  L  +G VY +G   +  LG    G  D V RPR + +L+  +V  I+TG  H 
Sbjct: 555 GSQFSVALTKSGCVYTWGKGDYHRLG---HGSDDHVRRPRKVAALQGKNVISIATGSLHC 611

Query: 444 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           V  TD+G +F +GDN+  QLG  +      P
Sbjct: 612 VACTDQGEVFTWGDNDEGQLGDGSTSAIPRP 642



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 138/279 (49%), Gaps = 7/279 (2%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V V++   H   +   G+VF+ G+      GH + N    RPR++E+L+G     + AG 
Sbjct: 392 VAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNS-CDRPRVIESLRGKEVVDIAAGG 450

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAV 285
             +  +T  G + T G   +G+LGHGD+ D+  PK +  L+ V  + V   +G +  L +
Sbjct: 451 AHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCI 510

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T +  V+S+G G    LG G       P+ ++    +G  VV+V  G +  VAL  SG V
Sbjct: 511 TDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQG--VVKVECGSQFSVALTKSGCV 568

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           YTWGKG    LGHG +     P  +++L+    + +           D G V+ +G    
Sbjct: 569 YTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSLHCVACTDQGEVFTWGDNDE 628

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
           G LG    G +  + RPR++ +L+   +++++ G  H++
Sbjct: 629 GQLG---DGSTSAIPRPRLVAALQGKKINRVACGSAHSL 664



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 167/382 (43%), Gaps = 50/382 (13%)

Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
            ++ + +G  H L +S+   VFS G +  G LGHG   + C     I       VV ++A
Sbjct: 390 KKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNS-CDRPRVIESLRGKEVVDIAA 448

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H+A +  +G++FT G       GH D+   + +P+LVEALKGV    V  G      
Sbjct: 449 GGAHSACITSTGELFTWGKGRYGRLGHGDSEDQM-KPKLVEALKGVRVIDVACGSGDAQT 507

Query: 232 LTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
           L I     V + G   +G+LG G +     P+ +  L   G VV++  G  + +A+T +G
Sbjct: 508 LCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQG-VVKVECGSQFSVALTKSG 566

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VY++G G    LGHG      +PR +     +G +V+ ++ G  H VA    G V+TWG
Sbjct: 567 CVYTWGKGDYHRLGHGSDDHVRRPRKVAAL--QGKNVISIATGSLHCVACTDQGEVFTWG 624

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW------- 402
               G LG G      +P P           V A + K    V  GS +   W       
Sbjct: 625 DNDEGQLGDGST--SAIPRPR---------LVAALQGKKINRVACGSAHSLAWSTSKPVN 673

Query: 403 ---------MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI---STGLYHTVVVTDRG 450
                    M +  L    + ++  VLR R+   +  HH S +   S  ++  +    RG
Sbjct: 674 AGKLPVQVPMEYNHL----QNITMPVLRNRL---VLLHHFSDLFCPSIPMFDLL----RG 722

Query: 451 RLFGFGDNERAQLGHDTLRGCL 472
           +L    +  +  +G DTLRG L
Sbjct: 723 KL-ADENGSKPLVGLDTLRGVL 743



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 18/247 (7%)

Query: 236 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           G +   G N  GQLG   G  +  PTP  ++A L  V    Q+  G   + AV      Y
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPV----QLIGGEQTLFAV------Y 357

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G V++WG+  
Sbjct: 358 ATGYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAE 417

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHG+      P  + SL+    V + A    +  +  TG ++ +G   +G LG   
Sbjct: 418 DGKLGHGNRNSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLG--- 474

Query: 413 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
            G S+  ++P+++++L+   V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 475 HGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDG 534

Query: 471 CLEPTEI 477
           C  P ++
Sbjct: 535 CKIPQKV 541



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 11/147 (7%)

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           D+  ++   SG ++ WG  + G LG  +     LP P  +L +   VQ+   ++  F + 
Sbjct: 298 DDWTLSWGGSGQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIGGEQTLFAVY 357

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
            T         G+G+ G    G ++ V  P +L+S++  H+ +++  +G  H + ++  G
Sbjct: 358 AT---------GYGAGGRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEG 408

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +F +G+ E  +LGH     C  P  I
Sbjct: 409 EVFSWGEAEDGKLGHGNRNSCDRPRVI 435


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 17/349 (4%)

Query: 106  IVETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
            +   S     Q+  G+  T +I +N +V +CG    G LG G      V  T I+     
Sbjct: 3494 VAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGF 3552

Query: 165  HVVQV---SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
             V Q+     S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q
Sbjct: 3553 VVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQ 3611

Query: 222  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGP 279
            ++ G   +  +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G 
Sbjct: 3612 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGL 3668

Query: 280  SYMLAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            ++ +AV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VA
Sbjct: 3669 NHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVA 3726

Query: 339  LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            L   G+VYT+G+     L  G   +   P+ +  L       +      T  L  TG VY
Sbjct: 3727 LTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVY 3786

Query: 399  GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             +G    G LG    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 3787 AWGSNSEGQLGL---GHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 3832



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 151/327 (46%), Gaps = 13/327 (3%)

Query: 158  INFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
            +  PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G
Sbjct: 3494 VAAPSFSQAQQVVCGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQG 3551

Query: 217  VPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
                Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VV
Sbjct: 3552 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVV 3610

Query: 274  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            Q++ G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G 
Sbjct: 3611 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGL 3668

Query: 334  EHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
             H VA+   G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L 
Sbjct: 3669 NHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALT 3728

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
              G VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ ++  G +
Sbjct: 3729 KDGHVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDV 3785

Query: 453  FGFGDNERAQLGHDTLRGCLEPTEIFI 479
            + +G N   QLG        EPT I +
Sbjct: 3786 YAWGSNSEGQLGLGHTNHVREPTLITV 3812



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGVSIQQISA 725



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 112/246 (45%), Gaps = 13/246 (5%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P     AP        Q+  G +    +  NG V + G 
Sbjct: 3472 VYLWGAGRHGQLAEAGRNVMVPV---AAP--SFSQAQQVVCGQNCTFVIQANGTVLACGE 3526

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3527 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3586

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 3587 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 3644

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL---FGFGDNERAQLGHDTLRGCL 472
            S+K L P  + +L  + + Q++ GL HTV V+  G +   FG GD  +  LG+ T +   
Sbjct: 3645 SNKKL-PERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSP 3703

Query: 473  EPTEIF 478
            +  +I 
Sbjct: 3704 QKVDIL 3709



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P+++     A QV   +  TFV+   G+V   G   
Sbjct: 3472 VYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 3528

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3529 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3585

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 3586 KLGHGNSDRQRRPRQIEALQGEE 3608



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAG 726


>gi|325186854|emb|CCA21400.1| HECT E3 ubiquitin ligase putative [Albugo laibachii Nc14]
          Length = 4666

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 166/360 (46%), Gaps = 33/360 (9%)

Query: 130 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           + V+SCG +  G LGHG +T    SFTR+       V +++A   H+  + + G+V TCG
Sbjct: 580 AEVWSCGQNSYGELGHG-DTVARNSFTRVESLLQRSVKEIAAGNEHSVVLTEEGEVLTCG 638

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-----FLTIRGHVHTCGSN 244
            N +  CGH  T R  +  ++ E    +   Q+++  +F G      L+  G V TCG N
Sbjct: 639 YNDNGQCGHNSTKRASYFKKVSE----LSSAQISSIYSFNGCEHSLLLSNDGRVATCGFN 694

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN------GVVYSFGSGS 298
            +GQLG G+T     P  I    +   V  I+    + +    +       ++++ G   
Sbjct: 695 DYGQLGQGNTNGLLVPNFINSFGK-RQVRNISCSYYHTIFACSDFGTLLPTLLFTCGRND 753

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS------GYVYTWGKGY 352
              LG G+  +   P  +  F    I V  +  G  H + + ++      G +  +GK  
Sbjct: 754 FGQLGTGDIENRNIPTLVVKFPASAI-VQSLGCGQYHSIVIFTTRAKGDQGQICAFGKND 812

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK-----TFVLVDTGSVYGFGWMGFGS 407
           CG LG G    + LP  L S +S+   Q   +  K       VL + G V+GFG   +G 
Sbjct: 813 CGQLGCGKSGFQILPVILPSFRSNTTAQHNPKFIKCGYYHNIVLCEEGHVWGFGRNDYGQ 872

Query: 408 LGFPDRGVSDKV---LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           LGF +  ++D +    RP+++ SL    VS I+ G YHT+   + G L+ FG N   QLG
Sbjct: 873 LGF-ETNLNDGIPHSSRPQLIKSLEGKDVSTIACGSYHTIAACENGLLYVFGRNNHGQLG 931



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 29/308 (9%)

Query: 181 QSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
           +  +V++CG NS    GH DT  R  F    VE+L     K++ AG   +  LT  G V 
Sbjct: 578 EKAEVWSCGQNSYGELGHGDTVARNSFTR--VESLLQRSVKEIAAGNEHSVVLTEEGEVL 635

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           TCG N +GQ GH  T      K ++ L   ++ S+     G  + L ++ +G V + G  
Sbjct: 636 TCGYNDNGQCGHNSTKRASYFKKVSELSSAQISSIYSFN-GCEHSLLLSNDGRVATCGFN 694

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS------GYVYTWGKG 351
               LG G  +  L P  I +F ++   V  +S    H +   S         ++T G+ 
Sbjct: 695 DYGQLGQGNTNGLLVPNFINSFGKR--QVRNISCSYYHTIFACSDFGTLLPTLLFTCGRN 752

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQV--CARKRKTFVLV-----DTGSVYGFGWMG 404
             G LG GD  ++ +P  +    +   VQ   C +     +       D G +  FG   
Sbjct: 753 DFGQLGTGDIENRNIPTLVVKFPASAIVQSLGCGQYHSIVIFTTRAKGDQGQICAFGKND 812

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ-----ISTGLYHTVVVTDRGRLFGFGDNE 459
            G LG    G     + P IL S R++  +Q     I  G YH +V+ + G ++GFG N+
Sbjct: 813 CGQLGCGKSGFQ---ILPVILPSFRSNTTAQHNPKFIKCGYYHNIVLCEEGHVWGFGRND 869

Query: 460 RAQLGHDT 467
             QLG +T
Sbjct: 870 YGQLGFET 877



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 123/306 (40%), Gaps = 33/306 (10%)

Query: 123 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF--- 178
           H+LL+SN   V +CG +  G LG G  T   +    IN      V  +S S  H  F   
Sbjct: 678 HSLLLSNDGRVATCGFNDYGQLGQG-NTNGLLVPNFINSFGKRQVRNISCSYYHTIFACS 736

Query: 179 ---VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLV------EALKGVPCKQVTAGLNF 228
               L    +FTCG N     G  D  NR I  P LV        ++ + C Q  + + F
Sbjct: 737 DFGTLLPTLLFTCGRNDFGQLGTGDIENRNI--PTLVVKFPASAIVQSLGCGQYHSIVIF 794

Query: 229 TGFLT-IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAGPSYM 282
           T      +G +   G N  GQLG G +  +  P  I P     +  Q     I  G  + 
Sbjct: 795 TTRAKGDQGQICAFGKNDCGQLGCGKSGFQILP-VILPSFRSNTTAQHNPKFIKCGYYHN 853

Query: 283 LAVTGNGVVYSFGS------GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           + +   G V+ FG       G    L  G  H   +P+ I++   +G  V  ++ G  H 
Sbjct: 854 IVLCEEGHVWGFGRNDYGQLGFETNLNDGIPHSS-RPQLIKSL--EGKDVSTIACGSYHT 910

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
           +A   +G +Y +G+   G LG  D  D   P P+ +  +    ++ A    T +L+    
Sbjct: 911 IAACENGLLYVFGRNNHGQLGTADNNDLATPFPVIAFINRHISRLSAGFYHTIILIGGAE 970

Query: 397 VYGFGW 402
           +   G+
Sbjct: 971 IKEIGY 976



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
           D    V++ G+   G LGHGD + +     + SL      ++ A    + VL + G V  
Sbjct: 577 DEKAEVWSCGQNSYGELGHGDTVARNSFTRVESLLQRSVKEIAAGNEHSVVLTEEGEVLT 636

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST--GLYHTVVVTDRGRLFGFGD 457
            G+   G  G      + +    + +  L +  +S I +  G  H++++++ GR+   G 
Sbjct: 637 CGYNDNGQCG---HNSTKRASYFKKVSELSSAQISSIYSFNGCEHSLLLSNDGRVATCGF 693

Query: 458 NERAQLGHDTLRGCLEPTEI 477
           N+  QLG     G L P  I
Sbjct: 694 NDYGQLGQGNTNGLLVPNFI 713



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 15/156 (9%)

Query: 120 GRYHTLLI-------SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQ- 168
           G+YH+++I           + + G + CG LG G    Q +     +F S   A H  + 
Sbjct: 786 GQYHSIVIFTTRAKGDQGQICAFGKNDCGQLGCGKSGFQILPVILPSFRSNTTAQHNPKF 845

Query: 169 VSASENHAAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
           +     H   + + G V+  G N      F     D      RP+L+++L+G     +  
Sbjct: 846 IKCGYYHNIVLCEEGHVWGFGRNDYGQLGFETNLNDGIPHSSRPQLIKSLEGKDVSTIAC 905

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           G   T      G ++  G N HGQLG  D  D  TP
Sbjct: 906 GSYHTIAACENGLLYVFGRNNHGQLGTADNNDLATP 941


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 135/275 (49%), Gaps = 7/275 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           + C      RP+ R R V A  G    Q  +G + +  L   G V +CG N+ GQLG   
Sbjct: 2   YFCWRAGGRRPL-RERQVCA-GGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
           T     P+ I  LE + +V  ++ G  + LAV   G V+++G+ S   LG GE +     
Sbjct: 60  TPRGEQPERIPALETL-NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFI 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I+T    GI +++V+ G  H VAL   G V++WG    G LG G E   +  P+ + 
Sbjct: 119 PKKIKTL--AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L  +G+ +G+G    G L         +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            V  IS G  HT V+T  G++F FGDN   QLGHD
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 14/297 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 284
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 344 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 456
           G   +G LG      + +   P++++ +    VSQI  G  HT+  +   G++  FG
Sbjct: 261 GDNSYGQLG---HDPTAEKRGPQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 13/294 (4%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 171
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 291 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 130/264 (49%), Gaps = 7/264 (2%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           P+ R R+   L GV  +Q  +G   +  L   G VH+CG N  GQLG          K I
Sbjct: 12  PVSRRRV--GLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRI 69

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRK 322
             LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +   L P  I+T    
Sbjct: 70  RALETL-HVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN-- 126

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 381
            I + +VS G  H +AL   G V++WG    G LG G +   +  P+ + SL      QV
Sbjct: 127 DIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQV 186

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
            A    +F L  +G+ +G+G    G L      VS +  +P  + +L+   V  IS G  
Sbjct: 187 AAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYE 246

Query: 442 HTVVVTDRGRLFGFGDNERAQLGH 465
           HTVV+T  G++F FGDN   QLGH
Sbjct: 247 HTVVLTQNGKVFTFGDNTYGQLGH 270



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 150/320 (46%), Gaps = 15/320 (4%)

Query: 143 LGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 202
           L  GP     VS  R+       + Q ++ E H+  +L +GQV +CGDN     G R   
Sbjct: 3   LSWGPGPRGPVSRRRVGL-GGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAP 61

Query: 203 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPK 261
                 R + AL+ +    V+ G   +  +  +G V   G+ + GQLG G+  +    P 
Sbjct: 62  CSAQLKR-IRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPM 120

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFR 320
            I  L ++  + Q++ G  + LA++  G V+S+GS S+  LG G++   +  P+ +++  
Sbjct: 121 KIKTLNDI-KIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSL- 178

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEI--DKTLPEPLSSLKSHL 377
             GI + +V+AG  H  AL  SG  + WG+   G L  H + +      P  +S+LK+  
Sbjct: 179 -DGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLG 237

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 437
            + +      T VL   G V+ FG   +G LG            P++++ +    VSQI 
Sbjct: 238 VIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSG---PQLVEGIDGL-VSQID 293

Query: 438 TGLYHTVV-VTDRGRLFGFG 456
            G YHT+  V   G++  FG
Sbjct: 294 CGSYHTLAYVYTTGKVVSFG 313



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 134/296 (45%), Gaps = 19/296 (6%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGH--GPETTQCVSFTRINFPSAAHVVQVSAS 172
           Q  +G  H+LL+ SN  V SCG +  G LG    P + Q     RI      HV  VS  
Sbjct: 27  QAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQ---LKRIRALETLHVDLVSCG 83

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           + H+  V   G+VF  G  S    G  +       P  ++ L  +  KQV+ G   +  L
Sbjct: 84  KEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCGHYHSLAL 143

Query: 233 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +  G V + GSN+ GQLG G     + +P+ +  L+ +  + Q+AAG ++  A++ +G  
Sbjct: 144 SEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGI-PLAQVAAGGAHSFALSLSGT- 201

Query: 292 YSFGSGSNFCLGHGEQHDE------LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
            SFG G N   G    H         +P +I   +  G  V+ +S G EH V L  +G V
Sbjct: 202 -SFGWGRNNA-GQLALHKNNVSGQSYKPYSISALKNLG--VIYISCGYEHTVVLTQNGKV 257

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +T+G    G LGH    +K+ P+ +  +   ++   C        +  TG V  FG
Sbjct: 258 FTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 148/326 (45%), Gaps = 29/326 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNS----SFCCGHRDTNRPIFRPRLVEALKGVP-CK 220
           V  V+    H+  V  +G+V+  GD S    +     R     I  P +      +P   
Sbjct: 210 VTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVA 269

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD------------RPTPKSIAPLEE 268
            V  G      +T  G + + G+   GQLG G   D            R    S+ P   
Sbjct: 270 TVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMP-RL 328

Query: 269 VGS----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
           VGS       +A G  + LA+T NG V+SFG G+   LGHG++ +   PR +      G+
Sbjct: 329 VGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDAL--WGV 386

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH--LAVQVC 382
            V +++AGD H  +L +SG VYTWG+G  GALGH D  +++ P P+ +L        Q+ 
Sbjct: 387 GVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIA 446

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHVSQISTGL 440
                T  +   GS     W G GS G    G +  VL P I+D   L    V QIS G 
Sbjct: 447 CGGDHTLAIAGGGSGVLLAW-GRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGS 505

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHD 466
            H+V VT+ G ++ +G   + QLGH+
Sbjct: 506 KHSVAVTEGGCVYTWGARTQGQLGHE 531



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 106/227 (46%), Gaps = 14/227 (6%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGH 145
            G+ K ++R          +V +       +  G  HTL L +N  VFS G    G LGH
Sbjct: 309 KGDAKSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGH 368

Query: 146 GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRP 204
           G +   C     ++      V Q++A +NH+A +  SG+V+T G       GHRD  NR 
Sbjct: 369 G-DRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRS 427

Query: 205 IFRPRLVEALK--GVPCKQVTAGLNFTGFLTIRGH----VHTCGSNTHGQLGHGDTLDRP 258
             RP  V+AL   GV C+Q+  G + T  L I G     +   G  + G  G G T D  
Sbjct: 428 --RPTPVQALDDAGVRCEQIACGGDHT--LAIAGGGSGVLLAWGRGSSGPAGTGATADVL 483

Query: 259 TPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
           TP  I   L     V QI+AG  + +AVT  G VY++G+ +   LGH
Sbjct: 484 TPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTWGARTQGQLGH 530



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 102/244 (41%), Gaps = 32/244 (13%)

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--------QHD 309
           PTP+S++ L+    V  +A G  + +AVT  G VY+FG     C G G+        +  
Sbjct: 197 PTPRSVSSLDGR-DVTHVAGGARHSVAVTSAGEVYAFGD----CSGEGKALSAPTRLREA 251

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
            + P  +         V  V+ G  H  A+ +SG + +WG    G LG G   D +    
Sbjct: 252 VIDPPEVTATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGD 311

Query: 370 LSSLKSHLA----------------VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
             SL    A                  V      T  L   G V+ FG   FG+LG  DR
Sbjct: 312 AKSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDR 371

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
              D    PR++D+L    V+QI+ G  H+  ++  GR++ +G  +   LGH  +     
Sbjct: 372 LNCDV---PRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSR 428

Query: 474 PTEI 477
           PT +
Sbjct: 429 PTPV 432


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 135/275 (49%), Gaps = 7/275 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           + C      RP+ R R V A  G    Q  +G + +  L   G V +CG N+ GQLG   
Sbjct: 2   YFCWRAGGRRPL-RERQVCA-GGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
           T     P+ I  LE + +V  ++ G  + LAV   G V+++G+ S   LG GE +     
Sbjct: 60  TPRGEQPERIPALETL-NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFI 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I+T    GI +++V+ G  H VAL   G V++WG    G LG G E   +  P+ + 
Sbjct: 119 PKKIKTL--AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L  +G+ +G+G    G L         +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            V  IS G  HT V+T  G++F FGDN   QLGHD
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 14/297 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 284
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 344 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 456
           G   +G LG      + +   P++++ +    VSQI  G  HT+  +   G++  FG
Sbjct: 261 GDNSYGQLG---HDPTAEKRGPQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 13/294 (4%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 171
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 291 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 161/355 (45%), Gaps = 21/355 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT  L+S+  V+  G +  G LG G  T +         PS   V  ++A   H
Sbjct: 365 IAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSG--VTAIAAGGLH 422

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
              ++ SG V+  G N+S   G     D++ P+    L   ++      + AG   T  L
Sbjct: 423 TCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVE-----TIAAGGWHTCAL 477

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V   G N  GQLG G T+   TP +++ L     V  IAAG  +  A+TG+G V+
Sbjct: 478 TSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPS--GVTAIAAGDYHTCALTGSGGVW 535

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G   +  LG G   D   P A+         V  ++AG  H  AL SSG V+ WG  +
Sbjct: 536 CWGYNLSGQLGDGTTTDRSTPVAVSGLTSG---VTVIAAGRFHTCALTSSGGVWCWGANF 592

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G   ++T P  +S L S +   + A    T  L  +G V+ +G   +G LG   
Sbjct: 593 DGQLGDGTTTNRTTPVAVSGLPSGV-TAIAAGGWHTCALTSSGEVWCWGDNYYGQLG--- 648

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
            G +     P  +  L +  V+ I+ G  HT  +T  G ++ +GDN   QLG  T
Sbjct: 649 DGTTTNRSTPGAVSGLPSG-VTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGT 702



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 160/351 (45%), Gaps = 19/351 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  L+S+  V+  G +  G LG G +T             A+ V  ++A   H
Sbjct: 416 IAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGL--ASGVETIAAGGWH 473

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNFTGFLT 233
              +  SG V+  G N+S   G       I+    V A+ G+P     + AG   T  LT
Sbjct: 474 TCALTSSGGVWCWGRNNS---GQLGDGSTIYHITPV-AVSGLPSGVTAIAAGDYHTCALT 529

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N  GQLG G T DR TP +++ L     V  IAAG  +  A+T +G V+ 
Sbjct: 530 GSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTS--GVTVIAAGRFHTCALTSSGGVWC 587

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+  +  LG G   +   P A+         V  ++AG  H  AL SSG V+ WG  Y 
Sbjct: 588 WGANFDGQLGDGTTTNRTTPVAVSGLPSG---VTAIAAGGWHTCALTSSGEVWCWGDNYY 644

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G   +++ P  +S L S +   + A    T  L  +G V+ +G   +G LG    
Sbjct: 645 GQLGDGTTTNRSTPGAVSGLPSGV-TAIAAGWEHTCALTSSGEVWCWGDNYYGQLG---D 700

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           G +     P  +  L +  V+ I+ G+YHT  +T  G +  +G+N   QLG
Sbjct: 701 GTTTNRSTPGAVSGLPSG-VTAIAAGVYHTCALTGSGGVMCWGNNGDGQLG 750



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 158/353 (44%), Gaps = 17/353 (4%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT  ++ S  V+  G +  G LG G  T +         PS   V  ++A + H
Sbjct: 314 IAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPSG--VETIAAGDYH 371

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLTI 234
              ++ SG V+  G N+S   G   T      P  V  L  GV    + AG   T  L  
Sbjct: 372 TCALMSSGGVWCWGRNNSGQLGD-GTTTARSTPAAVSGLPSGV--TAIAAGGLHTCALMS 428

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQLG G   D  TP +++ L     V  IAAG  +  A+T +G V+ +
Sbjct: 429 SGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLAS--GVETIAAGGWHTCALTSSGGVWCW 486

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G  ++  LG G     + P A+         V  ++AGD H  AL  SG V+ WG    G
Sbjct: 487 GRNNSGQLGDGSTIYHITPVAVSGLPSG---VTAIAAGDYHTCALTGSGGVWCWGYNLSG 543

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG G   D++ P  +S L S + V + A +  T  L  +G V+ +G    G LG    G
Sbjct: 544 QLGDGTTTDRSTPVAVSGLTSGVTV-IAAGRFHTCALTSSGGVWCWGANFDGQLG---DG 599

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
            +     P  +  L +  V+ I+ G +HT  +T  G ++ +GDN   QLG  T
Sbjct: 600 TTTNRTTPVAVSGLPS-GVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGT 651



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 157/365 (43%), Gaps = 20/365 (5%)

Query: 117 ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ S    C G +  G LG G  TT+         PS   V  ++A   H
Sbjct: 58  IAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSG--VTAIAAGNYH 115

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNFTGFLT 233
              +  SG V   G N S   G    N   F      A+ G+P     + AG + T  L 
Sbjct: 116 TCALTGSGGVRCWGANYSGQLG----NGLTFGRSTPGAVSGLPSGVTAIAAGGDHTCALM 171

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G V+ 
Sbjct: 172 SSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPS--GVTAIAAGGLHTCALTGSGEVWC 229

Query: 294 FGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +G      LG G   +    P A+         +  ++AG  H  AL SSG V+ WG+  
Sbjct: 230 WGYNYYGQLGDGTTTYSRSTPAAVGGLPSG---MTAIAAGGLHTCALMSSGGVWCWGRND 286

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G + D + P  +S L S +   + A    T  L  +G V+ +G  GFG LG   
Sbjct: 287 SGQLGDGSDTDSSTPVAVSGLPSGV-TAIAAGDYHTCALTGSGEVWCWGGNGFGQLG--- 342

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            G +     P  +  L +  V  I+ G YHT  +   G ++ +G N   QLG  T     
Sbjct: 343 DGTTTARSTPAAVSGLPS-GVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARS 401

Query: 473 EPTEI 477
            P  +
Sbjct: 402 TPAAV 406



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 158/363 (43%), Gaps = 17/363 (4%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  L+S+  V+  G +  G LG G +T           PS   V  ++A + H
Sbjct: 263 IAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSG--VTAIAAGDYH 320

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLTI 234
              +  SG+V+  G N  F      T      P  V  L  GV  + + AG   T  L  
Sbjct: 321 TCALTGSGEVWCWGGNG-FGQLGDGTTTARSTPAAVSGLPSGV--ETIAAGDYHTCALMS 377

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQLG G T  R TP +++ L     V  IAAG  +  A+  +G V+ +
Sbjct: 378 SGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPS--GVTAIAAGGLHTCALMSSGGVWCW 435

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G  ++  LG G   D   P A+         V  ++AG  H  AL SSG V+ WG+   G
Sbjct: 436 GLNNSGQLGDGSDTDSSTPVAVSGLASG---VETIAAGGWHTCALTSSGGVWCWGRNNSG 492

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG G  I    P  +S L S +   + A    T  L  +G V+ +G+   G LG  D  
Sbjct: 493 QLGDGSTIYHITPVAVSGLPSGV-TAIAAGDYHTCALTGSGGVWCWGYNLSGQLG--DGT 549

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +D+   P  +  L +  V+ I+ G +HT  +T  G ++ +G N   QLG  T      P
Sbjct: 550 TTDRS-TPVAVSGLTSG-VTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTP 607

Query: 475 TEI 477
             +
Sbjct: 608 VAV 610



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 117/251 (46%), Gaps = 11/251 (4%)

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           L+GV    + AG   T  LT  G V   G N  GQLG G    R TP +++ L     V 
Sbjct: 52  LQGV--TAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPS--GVT 107

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            IAAG  +  A+TG+G V  +G+  +  LG+G       P A+         V  ++AG 
Sbjct: 108 AIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG---VTAIAAGG 164

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           +H  AL SSG V  WG  Y G LG G   ++  P  +S L S +   + A    T  L  
Sbjct: 165 DHTCALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGV-TAIAAGGLHTCALTG 223

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +G V+ +G+  +G LG  D   +     P  +  L +  ++ I+ G  HT  +   G ++
Sbjct: 224 SGEVWCWGYNYYGQLG--DGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMSSGGVW 280

Query: 454 GFGDNERAQLG 464
            +G N+  QLG
Sbjct: 281 CWGRNDSGQLG 291



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 109/254 (42%), Gaps = 14/254 (5%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT  ++ S  V+  G +L G LG G  T +          S   V  ++A   H
Sbjct: 518 IAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSG--VTVIAAGRFH 575

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 233
              +  SG V+  G N     G    TNR    P  V  L  GV    + AG   T  LT
Sbjct: 576 TCALTSSGGVWCWGANFDGQLGDGTTTNR--TTPVAVSGLPSGV--TAIAAGGWHTCALT 631

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+T +G V+ 
Sbjct: 632 SSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGWEHTCALTSSGEVWC 689

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G      LG G   +   P A+         V  ++AG  H  AL  SG V  WG    
Sbjct: 690 WGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGVYHTCALTGSGGVMCWGNNGD 746

Query: 354 GALGHGDEIDKTLP 367
           G LG G  + +T P
Sbjct: 747 GQLGDGRPLYRTTP 760



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 98/216 (45%), Gaps = 11/216 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  GR+HT  L S+  V+  G++  G LG G  T +         PS   V  ++A   H
Sbjct: 569 IAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSG--VTAIAAGGWH 626

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 233
              +  SG+V+  GDN     G    TNR    P  V  L  GV    + AG   T  LT
Sbjct: 627 TCALTSSGEVWCWGDNYYGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGWEHTCALT 682

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G V  
Sbjct: 683 SSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGVYHTCALTGSGGVMC 740

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
           +G+  +  LG G       P  + T    G+++  +
Sbjct: 741 WGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMI 776


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 340
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 341 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 450
             +G V+  G   +G LG  +   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDIEDRKVPTTV 396



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 24/286 (8%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ A   +  +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P
Sbjct: 122 LVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGP 180

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                +  VS    H A +   GQ+FT GD S    GH D  + I  PR VE+L G+   
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTI 239

Query: 221 QVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V  G+  T  +              G + T G     +LGHGD   R  P  +A L + 
Sbjct: 240 AVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY 299

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVR 328
               ++A G S  + +T +G V++ G   N   G  G  + + +P  ++  +    HV++
Sbjct: 300 -DFYRVACGHSLTVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQ 354

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           ++ G  HV  L S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 355 IACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALR 400



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 365 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P  +S     L +  V      T ++   G ++ FG   FG LG  D      +  PR
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSISCPR 228

Query: 424 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 473 EPT 475
           +PT
Sbjct: 289 KPT 291



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 39/348 (11%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 173
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 174 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 285
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 286 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            +G    G LG  D  + D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--IEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 375
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 376 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           +++ G   TV +T  G+++  G++   QLG+
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGN 333



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 163
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 2/155 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  V  G  H   +  +G V+TWG+   G LGHG   D   P  + SL +     V  
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYH 442
            +  T  +  TG +Y +G  G  ++G    G       PR I   L    ++ +S G +H
Sbjct: 137 GEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWH 195

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T ++T  G+LF FGD     LGH  L+    P E+
Sbjct: 196 TALITSMGQLFTFGDGSFGVLGHGDLKSISCPREV 230



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 340 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 451 RLFGFGD--NERAQLGHDTLRGCLEPTEI 477
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 152/327 (46%), Gaps = 20/327 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HAA V ++G+VFT G+ S    GH  +      P LVE+L       V  G
Sbjct: 94  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGH-GSREDYIHPSLVESLAVSNVDFVACG 152

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T  G ++T G  TH  G LGHG  L    PK I+   E   V  ++ G  +  
Sbjct: 153 EFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTA 212

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 339
            +T  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 213 LITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESL--SGLKTIAVACGVWHTAAVVEVI 270

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SSG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L 
Sbjct: 271 VTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFHRIACGHSLTVGLT 330

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+G G   +G LG P    SD  L P +++ +   +V Q++ G YH  V+T +  +
Sbjct: 331 TSGQVWGMGNTVYGQLGNPR---SDGKL-PCLVEDIMGENVVQVACGSYHVAVLTVKSEV 386

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIFI 479
           F +G     +LGH  +     PT + +
Sbjct: 387 FTWGKGANGRLGHGDIEDRKIPTLVEV 413



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 148/354 (41%), Gaps = 35/354 (9%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 173
           ++  L+  N  VF+ G    G LGHG       P   + ++ + ++F        V+  E
Sbjct: 102 KHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDF--------VACGE 153

Query: 174 NHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H   V  +G+++T GD +      GH          R+  AL+G     V+ G   T  
Sbjct: 154 FHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTAL 213

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----- 286
           +T  G + T G  T G LGHG+    P P+ +  L  + ++  +A G  +  AV      
Sbjct: 214 ITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIA-VACGVWHTAAVVEVIVT 272

Query: 287 ------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
                  +G ++++G G    LGHG++   ++P  + +      H  R++ G    V L 
Sbjct: 273 QSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFH--RIACGHSLTVGLT 330

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           +SG V+  G    G LG+    D  LP  +  +     VQV        VL     V+ +
Sbjct: 331 TSGQVWGMGNTVYGQLGN-PRSDGKLPCLVEDIMGENVVQVACGSYHVAVLTVKSEVFTW 389

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G    G LG  D  + D+ + P +++ LR   V  I+ G   T  +  R  + G
Sbjct: 390 GKGANGRLGHGD--IEDRKI-PTLVEVLRDRGVRHIACGANFTAAICQRKWMSG 440



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 133/308 (43%), Gaps = 29/308 (9%)

Query: 102 HSSDIVETSAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRI 158
           H S +   +  N   +  G +HT  ++ +     +  G+   G+LGHG + +  +     
Sbjct: 134 HPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRIS 193

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
                  V  VS    H A +  +GQ+FT GD +    GH +    I  PR VE+L G+ 
Sbjct: 194 GALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGN-RESIPCPREVESLSGLK 252

Query: 219 CKQVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
              V  G+  T  +              G + T G     +LGHGD   R  P  +A L 
Sbjct: 253 TIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLI 312

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           +     +IA G S  + +T +G V+  G+     LG+     +L P  ++     G +VV
Sbjct: 313 DY-DFHRIACGHSLTVGLTTSGQVWGMGNTVYGQLGNPRSDGKL-PCLVEDI--MGENVV 368

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS----HLA----- 378
           +V+ G  HV  L     V+TWGKG  G LGHGD  D+ +P  +  L+     H+A     
Sbjct: 369 QVACGSYHVAVLTVKSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACGANF 428

Query: 379 -VQVCARK 385
              +C RK
Sbjct: 429 TAAICQRK 436



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 18/281 (6%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P  + 
Sbjct: 80  VLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVE 139

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  V +V  +A G  +  AVT  G +Y++G G++    LGHG       P+ I +   +
Sbjct: 140 SL-AVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRI-SGALE 197

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G  V  VS G  H   + S+G ++T+G G  G LGHG+      P  + SL     + V 
Sbjct: 198 GQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIAVA 257

Query: 383 ARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
                T  +V+            G ++ +G      LG  D+   +  ++P  + SL  +
Sbjct: 258 CGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDK---EPRVKPTCVASLIDY 314

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
              +I+ G   TV +T  G+++G G+    QLG+    G L
Sbjct: 315 DFHRIACGHSLTVGLTTSGQVWGMGNTVYGQLGNPRSDGKL 355



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 4/186 (2%)

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           S  +GS+  +    +HD L P+ +++  +  + V  V  G +H   +  +G V+TWG+  
Sbjct: 63  SVRAGSDAVIRSTVRHDVLLPKPLES--KLVLDVYHVDCGVKHAALVTKNGEVFTWGEES 120

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHG   D   P  + SL       V   +  T  +   G +Y +G  G  ++G   
Sbjct: 121 GGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWG-DGTHNIGLLG 179

Query: 413 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
            G       P RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH      
Sbjct: 180 HGTDLSHWIPKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESI 239

Query: 472 LEPTEI 477
             P E+
Sbjct: 240 PCPREV 245



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 20/131 (15%)

Query: 340 DSSGYVYTWGKGYC-GALGHGDEI--------DKTLPEPLSSLKSHLAVQV----CARKR 386
           DSSG VY WG+  C  ++  G +         D  LP+P   L+S L + V    C  K 
Sbjct: 47  DSSGDVYVWGEVICENSVRAGSDAVIRSTVRHDVLLPKP---LESKLVLDVYHVDCGVKH 103

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              V    G V+ +G    G LG    G  +  + P +++SL   +V  ++ G +HT  V
Sbjct: 104 AALV-TKNGEVFTWGEESGGRLGH---GSREDYIHPSLVESLAVSNVDFVACGEFHTCAV 159

Query: 447 TDRGRLFGFGD 457
           T  G L+ +GD
Sbjct: 160 TTAGELYTWGD 170


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 130  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 1797 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 1855

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 1856 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 1914

Query: 248  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 1915 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 1973

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 1974 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 2033

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
              + SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 2034 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 2090

Query: 428  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 2091 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 2137



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 1887 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 1944

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 1945 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 2004

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 2005 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 2062

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 2063 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 2122

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 2123 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 2162



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 17/338 (5%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 170
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 768  IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 825

Query: 171  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 229
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 826  SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 883

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 287
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 884  AAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 942

Query: 288  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 943  DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 1000

Query: 348  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 1001 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 1060

Query: 408  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 1061 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 1095



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 234
             V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 779  IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 836

Query: 235  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 837  DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 893

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 350
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 894  TWGLGEYGRLGHGDNATQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 951

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 952  GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 1010

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 1011 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 1062



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 125/272 (45%), Gaps = 10/272 (3%)

Query: 100  VEHSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR- 157
            + H   ++      ++ + +G  H L ++ +  VFS G    G LGHG  TT  +   R 
Sbjct: 807  LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRL 864

Query: 158  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
            +    A  +  V+   +H+A +   G+++T G       GH D N    +P+LV AL G 
Sbjct: 865  VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVTALAGR 923

Query: 218  PCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
               QV  G     T  LT  G V + G    G+LG G +    TP  I  L  +G VVQI
Sbjct: 924  RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQI 982

Query: 276  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
              G  + LA+T  G V+++G G  + LGHG      +P+ I   R  G  V+ V+ G  H
Sbjct: 983  ECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALH 1040

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             +A+  +G VY WG    G  G G+      P
Sbjct: 1041 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 1072



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 128/285 (44%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  
Sbjct: 1885 KKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVAD 1940

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G   
Sbjct: 1941 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGD 1999

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T
Sbjct: 2000 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALT 2058

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VY
Sbjct: 2059 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVY 2116

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 2117 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 2161



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 238 VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 734 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 789

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 790 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 849

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 850 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 909

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 910 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 966

Query: 473 EPTEI 477
            P EI
Sbjct: 967 TPHEI 971



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 281
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 1790 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 1841

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 1842 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 1901

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 1902 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 1961

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 1962 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 2018

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LG     GC  P +I
Sbjct: 2019 YGKLGRGGSDGCKLPYKI 2036



 Score = 45.1 bits (105), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 1787 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 1846

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 1847 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 1903

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+ E  +LGH
Sbjct: 1904 EVYAWGEGEDGKLGH 1918


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 166/337 (49%), Gaps = 17/337 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4122 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4180

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4181 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4239

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +A LE  ++G   ++A G ++ L V+ +G
Sbjct: 4240 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIG---EVACGLNHTLVVSTDG 4296

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4297 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 4354

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ + +L       +      T  L  +G VY +G    G L
Sbjct: 4355 GQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQL 4414

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            G    G ++ V  P ++ SL+   V QIS G  H+  
Sbjct: 4415 GL---GHTNHVREPTLVTSLQGKSVRQISAGRCHSAA 4448



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 402 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 459

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 460 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 517

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 518 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 573

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 574 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 633

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 634 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 686

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 687 EVYAWGNNSMGQCGQ 701



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 471 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 531 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 586

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 587 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 644

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 645 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 701

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 702 GNSTGPITKPKKVSGLDGVAIQQISA 727



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 147/320 (45%), Gaps = 13/320 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS     QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4115 PSFCQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4172

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4173 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4231

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  +  V+ G  H 
Sbjct: 4232 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAAL--EGYQIGEVACGLNHT 4289

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            + + + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4290 LVVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDG 4349

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ + +L    V  I+ G  HT+ ++  G ++ +
Sbjct: 4350 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAW 4406

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4407 GSNSEGQLGLGHTNHVREPT 4426



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 105/230 (45%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V   G+  HGQL   G     P P             Q+  G +    +  NG V + G 
Sbjct: 4090 VFLWGAGRHGQLAEAGRNAVSPPPSP-----SFCQAQQVICGQNCTFVIQANGTVLACGE 4144

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4145 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4204

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4205 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 4262

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 464
            S+K L P  + +L  + + +++ GL HT+VV TD   ++ FGD +  +LG
Sbjct: 4263 SNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLG 4311



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 376 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 431

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 432 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 490

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 491 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 547



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 631 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 688

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 689 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAG 728



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            V+ WG G  G L      +   P P  S     A QV   +  TFV+   G+V   G   
Sbjct: 4090 VFLWGAGRHGQLAEAGR-NAVSPPPSPSFCQ--AQQVICGQNCTFVIQANGTVLACGEGS 4146

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4147 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4203

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4204 KLGHGNSDRQRRPRQIEALQGEE 4226


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 17/339 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4034 QVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4092

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4093 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4151

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ +AV+ +G
Sbjct: 4152 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTVAVSTDG 4208

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4209 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL--CGIGIKKVACGTQFSVALTKDGHVYTF 4266

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L       +      T  L  TG VY +G    G L
Sbjct: 4267 GQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQL 4326

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4327 GL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4362



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 164/345 (47%), Gaps = 16/345 (4%)

Query: 109 TSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 167
           +S  +   I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + 
Sbjct: 400 SSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIK 458

Query: 168 QVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVT 223
           +VS+S   + H       G+VF+ GD      GH +++   + P+L++  L+G     V+
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVCVS 517

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
           AG   +  +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +
Sbjct: 518 AGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIINVG---EVSCGSSHTI 574

Query: 284 AVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           A++ +G  V+SFG G N  LGHG+ +   +P+ I+    +G+ + +V AG +  +AL S+
Sbjct: 575 ALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEAL--QGMFIRKVCAGSQSSLALTST 632

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G VY WG G C   G   E     P+ +  L +   V +         L     VY +G 
Sbjct: 633 GQVYAWGCGACLGCG-SSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGN 691

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
              G  G      +  + +P+ +  L    + QIS G  H++  T
Sbjct: 692 NSMGQCG--QGNSTGPITKPKKVGGLDGIAIQQISAGTSHSLAWT 734



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 143/303 (47%), Gaps = 26/303 (8%)

Query: 174 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 226
            +  FV+ + G V  CG  S    G  D+N      +  F P    ++K V   + + G 
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSIKKVSSSKGSDG- 468

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AVT
Sbjct: 469 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 345
            +G +Y++G G    LGHG+ +     R I T  +  I+V  VS G  H +AL   G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDIINVGEVSCGSSHTIALSKDGRTV 583

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---W 402
           +++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
           +G GS            LRP++++ L A  +  IS G  H + ++    ++ +G+N   Q
Sbjct: 644 LGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 463 LGH 465
            G 
Sbjct: 697 CGQ 699



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 8/263 (3%)

Query: 218  PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQI 275
            P +QV  G N T  +   G V  CG  ++G+LG G++ D      I+ L+   V  +V  
Sbjct: 4031 PAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTS 4090

Query: 276  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
                 + +A+T +G V+S+G G    LGHG    + +PR I+    +G  VV++S G +H
Sbjct: 4091 CGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL--QGEEVVQMSCGFKH 4148

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDT 394
               + + G ++T+G G  G LG G+  +K LPE +++L+ +   QV C       V  D 
Sbjct: 4149 SAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDG 4208

Query: 395  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
              V+ FG   +G LG    G S     P+ +D L    + +++ G   +V +T  G ++ 
Sbjct: 4209 SMVWAFGDGDYGKLGL---GNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYT 4265

Query: 455  FGDNERAQLGHDTLRGCLEPTEI 477
            FG +    L     R    P ++
Sbjct: 4266 FGQDRLIGLPEGRARNHNRPQQV 4288



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 13/324 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4027 PSFSPAQQVVCGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4084

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4085 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4143

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4144 CGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4201

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            VA+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4202 VAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDG 4261

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  I+ G  HT+ ++  G ++ +
Sbjct: 4262 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAW 4318

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 4319 GSNSEGQLGLGHTNHVREPTLVTV 4342



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 13/231 (5%)

Query: 238  VHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            V+  G+  HGQL     + +      S +P +      Q+  G +    +  NG V + G
Sbjct: 4002 VYLWGAGRHGQLAEAGRNVMIPAAAPSFSPAQ------QVVCGQNCTFVIQANGTVLACG 4055

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCG 354
             GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G
Sbjct: 4056 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4115

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +  
Sbjct: 4116 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN-- 4173

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLG 464
             S+K L P  + +L  + + Q++ GL HTV V TD   ++ FGD +  +LG
Sbjct: 4174 TSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4223



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLASSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 4002 VYLWGAGRHGQLA---EAGRNVMIPAAAPSFSPAQQVVCGQNCTFVIQANGTVLACGEGS 4058

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4059 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4115

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4116 KLGHGNSDRQRRPRQIEALQGEE 4138


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 135/275 (49%), Gaps = 7/275 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           + C      RP+ R R V A  G    Q  +G + +  L   G V +CG N+ GQLG   
Sbjct: 2   YFCWRAGGRRPL-RERQVCA-GGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKG 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
           T     P+ I  LE + +V  ++ G  + LAV   G V+++G+ S   LG GE +     
Sbjct: 60  TPRGEQPERIPALETL-NVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFI 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I+T    GI +++V+ G  H VAL   G V++WG    G LG G E   +  P+ + 
Sbjct: 119 PKKIKTL--AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L  +G+ +G+G    G L         +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            V  IS G  HT V+T  G++F FGDN   QLGHD
Sbjct: 237 GVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 14/297 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLNVALVSCG 83

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 284
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 344 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 456
           G   +G LG      + +   P++++ +    VSQI  G  HT+  +   G++  FG
Sbjct: 261 GDNSYGQLG---HDPTAEKRGPQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 136/294 (46%), Gaps = 13/294 (4%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 171
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      +V  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLNVALVSC 82

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 291 VYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            + +GS S   L   G+       +P +I   +  G  VV +S G +H   L   G V+T
Sbjct: 202 SFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKVFT 259

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 260 FGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 24/327 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HA+ V ++G+VFT G++S    GH  T      PRLVE+L       V  G
Sbjct: 79  VYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGH-GTREDSVHPRLVESLAACNIDFVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++T G  TH  G LGHG  +    P+ I+ PLE +  +  ++ G  + 
Sbjct: 138 EFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGL-QIAYVSCGTWHT 196

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 340
             +T  G +++FG GS   LGHG+      PR +++    G+  + V+ G  H  A+   
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESL--SGLKTIAVACGVWHTAAIVEV 254

Query: 341 ---------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                    S+G ++TWG G    LGHGD+  +  P  ++SL  +   +V      T  L
Sbjct: 255 IVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVACGHSLTVGL 314

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRG 450
             +G V+  G   +G LG  +   SD   RP ++ D + + HV QI+ G YH  V+T R 
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLN---SDG--RPCLVEDKIASEHVLQIACGSYHVAVLTSRS 369

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +F +G     +LGH  +     PT +
Sbjct: 370 EVFTWGKGANGRLGHGDIEDRKVPTTV 396



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 24/286 (8%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ A   +  +  G +HT  ++ +     +  G+   G+LGHG +    +   RI+ P
Sbjct: 122 LVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP-RRISGP 180

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                +  VS    H A +   GQ+FT GD S    GH D  + I  PR VE+L G+   
Sbjct: 181 LEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL-KSISCPREVESLSGLKTI 239

Query: 221 QVTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V  G+  T  +              G + T G     +LGHGD   R  P  +A L + 
Sbjct: 240 AVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDY 299

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVR 328
               ++A G S  + +T +G V++ G   N   G  G  + + +P  ++  +    HV++
Sbjct: 300 -DFYRVACGHSLTVGLTTSGKVWTMG---NSVYGQLGNLNSDGRPCLVED-KIASEHVLQ 354

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           ++ G  HV  L S   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 355 IACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALR 400



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGT 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR +++      ++  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSVHPRLVESL--AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGH 171

Query: 365 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P  +S     L +  V      T ++   G ++ FG   FG LG  D      +  PR
Sbjct: 172 WIPRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDL---KSISCPR 228

Query: 424 ILDSLRAHHVSQISTGLYHT-----VVVTDR------GRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT     V+VT        G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARL 288

Query: 473 EPT 475
           +PT
Sbjct: 289 KPT 291



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 39/348 (11%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 173
           R+ +L+  N  VF+ G    G LGHG       P   + ++   I+F        V+  E
Sbjct: 87  RHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDF--------VACGE 138

Query: 174 NHAAFVLQSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            H   V  +G+++T GD +      GH  D    I R R+   L+G+    V+ G   T 
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPR-RISGPLEGLQIAYVSCGTWHTA 197

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 285
            +T  G + T G  + G LGHGD      P+ +  L  + ++  +A G  +  A+     
Sbjct: 198 LITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIA-VACGVWHTAAIVEVIV 256

Query: 286 ------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
                    G ++++G G    LGHG++   L+P  + +      +  RV+ G    V L
Sbjct: 257 TQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFY--RVACGHSLTVGL 314

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            +SG V+T G    G LG+ +   +  L E    + S   +Q+        VL     V+
Sbjct: 315 TTSGKVWTMGNSVYGQLGNLNSDGRPCLVE--DKIASEHVLQIACGSYHVAVLTSRSEVF 372

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            +G    G LG  D  + D+ + P  +++LR   V  I+ G   T  +
Sbjct: 373 TWGKGANGRLGHGD--IEDRKV-PTTVEALRDRAVRHIACGANFTAAI 417



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +    V  G+     +T  G V T G ++ G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 325
              ++  +A G  +  AVT  G +Y++G G++    LGHG       PR I +   +G+ 
Sbjct: 128 AC-NIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRI-SGPLEGLQ 185

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKS------- 375
           +  VS G  H   + S G ++T+G G  G LGHGD    + P   E LS LK+       
Sbjct: 186 IAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGV 245

Query: 376 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
            H A  V     ++   V  G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDK---EARLKPTCVASLIDYDFY 302

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           +++ G   TV +T  G+++  G++   QLG+
Sbjct: 303 RVACGHSLTVGLTTSGKVWTMGNSVYGQLGN 333



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 18/221 (8%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRI-----NFPSA 163
           ++ G +HT LI++   +F+ G    GVLGHG       P   + +S  +           
Sbjct: 189 VSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWHT 248

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V  +++ A   + +G++FT GD      GH D      +P  V +L      +V 
Sbjct: 249 AAIVEVIVTQSSA--TVSAGKLFTWGDGDKHRLGHGD-KEARLKPTCVASLIDYDFYRVA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V T G++ +GQLG+ ++  RP         E   V+QIA G  ++ 
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGRPCLVEDKIASE--HVLQIACGSYHVA 363

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 364 VLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAV 404



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 2/155 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  V  G  H   +  +G V+TWG+   G LGHG   D   P  + SL +     V  
Sbjct: 77  LDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVAC 136

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYH 442
            +  T  +  TG +Y +G  G  ++G    G       PR I   L    ++ +S G +H
Sbjct: 137 GEFHTCAVTTTGELYTWG-DGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTWH 195

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T ++T  G+LF FGD     LGH  L+    P E+
Sbjct: 196 TALITSMGQLFTFGDGSFGVLGHGDLKSISCPREV 230



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 14/149 (9%)

Query: 340 DSSGYVYTWGKGYC--GALGHGDEI-------DKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           DS G VY WG+  C   A    D +       D  LP+PL S        V    R   +
Sbjct: 32  DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V+ +G    G LG    G  +  + PR+++SL A ++  ++ G +HT  VT  G
Sbjct: 92  VTRNGEVFTWGEDSGGRLGH---GTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTG 148

Query: 451 RLFGFGD--NERAQLGHDTLRGCLEPTEI 477
            L+ +GD  +    LGH T  G   P  I
Sbjct: 149 ELYTWGDGTHNVGLLGHGTDVGHWIPRRI 177


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 166/337 (49%), Gaps = 13/337 (3%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4012 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4070

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4071 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4129

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 290
            +T  G + T G+  +G+LG G+T ++  P+ +  LE +  + Q+A G ++ LAV+ +G +
Sbjct: 4130 VTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGL-HIGQVACGLNHTLAVSADGSL 4188

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+G+
Sbjct: 4189 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTFGQ 4246

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
                 L  G   +   P+ +  L       +      T  L  +G VY +G    G LG 
Sbjct: 4247 DRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGL 4306

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
               G ++ V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4307 ---GHTNHVREPTLVTALQGKNIRQISAGRCHSAAWT 4340



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 160/337 (47%), Gaps = 16/337 (4%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--- 172
           I  G+Y T +IS + SV +CG    G LG G    Q  +  ++ F     + +VS+S   
Sbjct: 408 IEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQS-TLKKLTFEPHRSIKKVSSSKGS 466

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGF 231
           + H       G+VF+ GD      GH +++   + P+L++  L+G     V+AG   +  
Sbjct: 467 DGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGTLQGKVVVCVSAGYRHSAA 525

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 290
           +T  G ++T G    G+LGHGD+  R  P  +  +  VG   +++ G S+ +A++ +G  
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG---EVSCGSSHTIALSKDGRT 582

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+SFG G N  LGHG+ +   +P+ ++    +G+   +V AG +  +AL S+G VY WG 
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFTRKVCAGSQSSLALTSTGQVYAWGC 640

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G C   G   E     P+ +  L +   V +         L     VY +G    G  G 
Sbjct: 641 GACLGCG-SSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCG- 698

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
                +  + +P+ +  L    + QIS G  H++  T
Sbjct: 699 -QGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWT 734



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 142/303 (46%), Gaps = 26/303 (8%)

Query: 174 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 226
            +  FV+ + G V  CG  S    G  D+N      +  F P    ++K V   + + G 
Sbjct: 412 QYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSIKKVSSSKGSDG- 468

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AVT
Sbjct: 469 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVT 527

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 345
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 583

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---W 402
           +++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGAC 643

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
           +G GS            LRP++++ L A  +  IS G  H + ++    ++ +G+N   Q
Sbjct: 644 LGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQ 696

Query: 463 LGH 465
            G 
Sbjct: 697 CGQ 699



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 153/327 (46%), Gaps = 17/327 (5%)

Query: 158  INFPSAA----HVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 212
            +  PS A       QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ 
Sbjct: 3998 VMIPSGAGSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVIS 4055

Query: 213  ALKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            AL+G    Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+  
Sbjct: 4056 ALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG- 4114

Query: 270  GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
              VVQ++ G  +   VT +G +++FG+G    LG G   ++  P  +     +G+H+ +V
Sbjct: 4115 EEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGLHIGQV 4172

Query: 330  SAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 388
            + G  H +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +
Sbjct: 4173 ACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFS 4232

Query: 389  FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
              L   G VY FG      +G P+ G +    RP+++  L    +  I+ G  HT+ ++ 
Sbjct: 4233 VALTKDGHVYTFGQDRL--IGLPE-GRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSA 4289

Query: 449  RGRLFGFGDNERAQLGHDTLRGCLEPT 475
             G ++ +G N   QLG        EPT
Sbjct: 4290 SGEVYAWGSNSEGQLGLGHTNHVREPT 4316



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+    F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPCFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++  +L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 45.1 bits (105), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            V+ WG G  G L    E  + +  P  +     A QV   +  TFV+   G+V   G   
Sbjct: 3980 VFLWGAGRHGQLA---EAGRNVMIPSGAGSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4036

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4037 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4093

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4094 KLGHGNSDRQRRPRQIEALQGEE 4116


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 135/262 (51%), Gaps = 11/262 (4%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           ++V+ G   T F+   G V+TCGSN +GQLG      RPT   +    +  S+ Q++ G 
Sbjct: 37  REVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKRPT---VITALDTQSIQQVSCGD 93

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQ---HDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            + L V     V+S+G      LGH  +   ++  +PR ++      + +V+V+ G +H 
Sbjct: 94  YHNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSRRPRMVKEL--SSLQIVQVACGGKHS 151

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
           +AL + G +++WG    G LG G   ++  P+ L+SL      Q+ A    +FVL  +G+
Sbjct: 152 LALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGA 211

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           V+GFG   FG LG  D G  D+   P  + SLR+  V+ IS G  HT V+T  G +  FG
Sbjct: 212 VFGFGRNTFGQLGLGDTG--DRKY-PTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFG 268

Query: 457 DNERAQLGHDTLRGCLEPTEIF 478
                QLGH++      P ++F
Sbjct: 269 AGSYGQLGHNSNNHEALPRKVF 290



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 163/354 (46%), Gaps = 20/354 (5%)

Query: 132 VFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +F  G++  G LG  G E    ++     F +   + +VS    H  FVL  G V+TCG 
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N     G    ++   RP ++ AL     +QV+ G      +  +  V + G +  GQLG
Sbjct: 61  NDYGQLGQDKGHK---RPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLG 117

Query: 251 H-----GDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
           H     G+   RP   K ++ L+    +VQ+A G  + LA++ +G ++S+G+ S+  LG 
Sbjct: 118 HTLEAGGNNSRRPRMVKELSSLQ----IVQVACGGKHSLALSNDGRIFSWGNNSHGQLGI 173

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   ++ +P+ + +    GI   ++ AG  H   L  SG V+ +G+   G LG GD  D+
Sbjct: 174 GSTKNQPKPQELTSL--TGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDR 231

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
             P  + SL+S     +   +  T VL   G V  FG   +G LG      ++    PR 
Sbjct: 232 KYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLG---HNSNNHEALPRK 288

Query: 425 LDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +  L    V+Q++ G  HT+  V   GR++ FG     QLG      C  P  +
Sbjct: 289 VFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITV 342



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 144/301 (47%), Gaps = 16/301 (5%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +++ GR HT+ + +  +V++CGS+  G LG      +    T ++  S   + QVS  + 
Sbjct: 38  EVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKRPTVITALDTQS---IQQVSCGDY 94

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           H   V    QVF+ G +     GH      + +R   RPR+V+ L  +   QV  G   +
Sbjct: 95  HNLVVNDKYQVFSWGYDDCGQLGHTLEAGGNNSR---RPRMVKELSSLQIVQVACGGKHS 151

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             L+  G + + G+N+HGQLG G T ++P P+ +  L  +    QI AG S+   ++ +G
Sbjct: 152 LALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGI-PFCQIVAGGSHSFVLSKSG 210

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+ FG  +   LG G+  D   P  +++ R   + V  +S G+EH   L   G V T+G
Sbjct: 211 AVFGFGRNTFGQLGLGDTGDRKYPTHVKSLR--SLKVTHISCGEEHTAVLTLDGGVLTFG 268

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G  G LGH     + LP  +  L      Q+ C R      +  +G +Y FG  G G L
Sbjct: 269 AGSYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQL 328

Query: 409 G 409
           G
Sbjct: 329 G 329



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 15/183 (8%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H+ ++S S +VF  G +  G LG G +T      T +    +  V  +S  E 
Sbjct: 195 QIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLG-DTGDRKYPTHVKSLRSLKVTHISCGEE 253

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG-LNFTGFLT 233
           H A +   G V T G  S    GH   N     PR V  L G+   Q+  G ++   ++ 
Sbjct: 254 HTAVLTLDGGVLTFGAGSYGQLGHNSNNHEAL-PRKVFELMGLEVTQLACGRMHTMAYVE 312

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----------APLEEVGSVVQ-IAAGPSYM 282
             G +++ G   +GQLG   T +  TP ++            LEE   VVQ I AG    
Sbjct: 313 SSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVPFAGDNSLEEQCYVVQAITAGGDQA 372

Query: 283 LAV 285
            A+
Sbjct: 373 FAL 375


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 151/311 (48%), Gaps = 20/311 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++  E HAA + + G+V++ G+ SS   G++  N  + RP+LVE++  +  K V  G
Sbjct: 263 VQSIACGETHAAIITKQGEVYSWGNESSGGIGNQ-VNIKVSRPKLVESVASLHVKAVAYG 321

Query: 226 LNFTGFLTIRGHVHTCGSNTH-GQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
                 +T+ G +   G   H GQL  + + L  P  K  +PL+ + SVV+IA GP +  
Sbjct: 322 SKHACAVTVSGELFEWGEGPHMGQLDCYANNLWFPH-KLFSPLDGI-SVVKIACGPWHTA 379

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 339
            +T +G +Y++G G+   LGHG+     +P+ ++    KG  V  V+ G  H  A+    
Sbjct: 380 IITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYL--KGSRVKCVACGPWHTAAIVEVL 437

Query: 340 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
                      ++TWG    G LGH D+  K +P  + SL  +  +QV      T VL  
Sbjct: 438 SDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSI 497

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           TG V+  G    G LG P    +D      +   L+   V  IS+G  H  V+T  G++F
Sbjct: 498 TGVVFTIGSSMHGQLGNPH---ADGRTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVF 554

Query: 454 GFGDNERAQLG 464
            +G  +  QLG
Sbjct: 555 TWGKGKEGQLG 565



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 34/293 (11%)

Query: 112 GNQMQITTGR---------YHTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSF-TRI 158
           GNQ+ I   R          H   ++  S  +C  ++ G L   G GP   Q   +   +
Sbjct: 294 GNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQLDCYANNL 353

Query: 159 NFP-------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            FP           VV+++    H A +  SGQ++T GD +    GH DT +   RP+ V
Sbjct: 354 WFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDT-QGTTRPKEV 412

Query: 212 EALKGVPCKQVTAGLNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           E LKG   K V  G   T  +          + R  + T G    G+LGH D   +  P 
Sbjct: 413 EYLKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPT 472

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
            +  L +    +Q++ G +  + ++  GVV++ GS  +  LG+    D     A++   +
Sbjct: 473 CVDSLTDY-DFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGN-PHADGRTVCAVEGLLK 530

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
               V  +S+G  HV  L ++G V+TWGKG  G LG GD ++++ P  + +L+
Sbjct: 531 TEF-VRHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDALE 582



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 21/293 (7%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           VF  GD       + DT++ +  P LV++   +  + +  G      +T +G V++ G+ 
Sbjct: 231 VFFWGDAFGSILDYDDTSKSL--PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNE 288

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
           + G +G+   +    PK +   E V S  V  +A G  +  AVT +G ++ +G G +   
Sbjct: 289 SSGGIGNQVNIKVSRPKLV---ESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQ 345

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
                ++   P  + +    GI VV+++ G  H   + SSG +YT+G G  G LGHGD  
Sbjct: 346 LDCYANNLWFPHKLFS-PLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQ 404

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS----------VYGFGWMGFGSLGFPD 412
             T P+ +  LK      V      T  +V+  S          ++ +G    G LG  D
Sbjct: 405 GTTRPKEVEYLKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHAD 464

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           + +    L P  +DSL  +   Q+S G+  TVV++  G +F  G +   QLG+
Sbjct: 465 KKMK---LIPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGN 514



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 144/345 (41%), Gaps = 26/345 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I  G  H  +I+    V+S G+   G  G G +    VS  + +   ++ HV  V+    
Sbjct: 266 IACGETHAAIITKQGEVYSWGNESSG--GIGNQVNIKVSRPKLVESVASLHVKAVAYGSK 323

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           HA  V  SG++F  G+      G  D   N   F  +L   L G+   ++  G   T  +
Sbjct: 324 HACAVTVSGELFEWGEGPHM--GQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAII 381

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAV------ 285
           T  G ++T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+      
Sbjct: 382 TSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLK--GSRVKCVACGPWHTAAIVEVLSD 439

Query: 286 ----TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
               +    ++++G      LGH ++  +L P  + +        ++VS G    V L  
Sbjct: 440 FKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSL--TDYDFIQVSCGMALTVVLSI 497

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +G V+T G    G LG+     +T+      LK+     + +      VL   G V+ +G
Sbjct: 498 TGVVFTIGSSMHGQLGNPHADGRTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVFTWG 557

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
               G LG  D         P ++D+L    V  IS G  +T  V
Sbjct: 558 KGKEGQLGLGDYLNRST---PTLVDALEGRQVESISCGYNYTAAV 599



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 20/217 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  IA G ++   +T  G VYS+G+ S+  +G+       +P+ +++     +HV  V+ 
Sbjct: 263 VQSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESV--ASLHVKAVAY 320

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP---LSSLKSHLAVQVCARKRKT 388
           G +H  A+  SG ++ WG+G    +G  D     L  P    S L     V++      T
Sbjct: 321 GSKHACAVTVSGELFEWGEG--PHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHT 378

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
            ++  +G +Y +G   FG LG  D   +    RP+ ++ L+   V  ++ G +HT  + +
Sbjct: 379 AIITSSGQLYTYGDGTFGVLGHGD---TQGTTRPKEVEYLKGSRVKCVACGPWHTAAIVE 435

Query: 449 ----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
                     R +LF +GD +R +LGH   +  L PT
Sbjct: 436 VLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPT 472



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 2/154 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  ++ G+ H   +   G VY+WG    G +G+   I  + P+ + S+ S L V+  A
Sbjct: 261 LDVQSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVAS-LHVKAVA 319

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
              K    V T S   F W     +G  D   ++     ++   L    V +I+ G +HT
Sbjct: 320 YGSKHACAV-TVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHT 378

Query: 444 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            ++T  G+L+ +GD     LGH   +G   P E+
Sbjct: 379 AIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEV 412


>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
 gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
          Length = 719

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 172/377 (45%), Gaps = 25/377 (6%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G YHT  L+S+  V+S G    G LG G   T+       N     HV+ + +   
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAKNLN---HVIDIHSGVR 93

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 233
            +  + Q G V+T G N +   G   T   +  P  V  L G+  K ++ GL + G  L+
Sbjct: 94  SSMALRQDGTVWTWGANENGQLG-IGTITNVNAPAQVPGLSGI--KAISGGLAYHGMALS 150

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V T G N +G+LG+G T  + +P  +A L +V     IAAG  Y LA+  +G V++
Sbjct: 151 ENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSDV---TAIAAGGYYSLALKSDGTVWA 207

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G   +  LG G   +   P  +         V+ ++AG  H +A+   G V+ WG    
Sbjct: 208 WGVNGSGELGDGTTTERHVPVQVAGL----TDVMAIAAGGSHSLAIRQDGTVWAWGNNTY 263

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G    +T P  + +L+ H+ V V      +  +   G+V+ +G      LG    
Sbjct: 264 GTLGDGTRTHRTRPVQVRNLQ-HI-VAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSN 321

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG---HDTLRG 470
             S   L P  +  +   HV +IS G +H+V +   G ++G+G N   QLG   ++  RG
Sbjct: 322 ASS---LIPVPVTGIE--HVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRG 376

Query: 471 CLEPTEIFIQEMEEDTG 487
               T+  +     DTG
Sbjct: 377 IPTLTKAVLDTTSPDTG 393


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 155/323 (47%), Gaps = 21/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V+    HAA V +  +VFT G+  S   GH  T   +F+PRLVE+L     + +  G
Sbjct: 80  VSYVACGVKHAALVTRQSEVFTWGEECSGRLGH-GTGTNVFQPRLVESLSICNVELIACG 138

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PL+ +  V  ++ G  + 
Sbjct: 139 EFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGL-PVSTVSCGTWHT 197

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 198 ALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESL--KGLRTISVSCGVWHTAAVVEV 255

Query: 340 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
                  SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L  
Sbjct: 256 IISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFHKAACGHTLTIGLTT 315

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRL 452
           +G ++  G   +G LG P+    +    PR+++  L    V +++ G YH  V+T+ G +
Sbjct: 316 SGHIFTVGSSVYGQLGNPN----NDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEV 371

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH  +     PT
Sbjct: 372 YTWGKGANGRLGHGDIADRKVPT 394



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 151/338 (44%), Gaps = 20/338 (5%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           ++  L+   S VF+ G    G LGHG   T       +   S  +V  ++  E H   V 
Sbjct: 88  KHAALVTRQSEVFTWGEECSGRLGHG-TGTNVFQPRLVESLSICNVELIACGEFHTCAVT 146

Query: 181 QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
            +G ++T GD  +++   GH          R+   L G+P   V+ G   T  +T  G +
Sbjct: 147 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSTVSCGTWHTALITSSGQL 206

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 289
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV           +G
Sbjct: 207 YTFGDGTFGVLGHGNRASCSYPKEVESLKGL-RTISVSCGVWHTAAVVEVIISQSNASSG 265

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            ++++G G  + LGHG++  +L+P  I +      H  + + G    + L +SG+++T G
Sbjct: 266 KLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNFH--KAACGHTLTIGLTTSGHIFTVG 323

Query: 350 KGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
               G LG+ +  D   P  +   L     V+V        VL + G VY +G    G L
Sbjct: 324 SSVYGQLGNPNN-DGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRL 382

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           G  D  ++D+ + P ++++LR   V +++ G   T  +
Sbjct: 383 GHGD--IADRKV-PTLVEALRDRSVKRVACGSSFTAAI 417



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 132/278 (47%), Gaps = 18/278 (6%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           I  G +HT  ++ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 135 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLDGLPVSTVSCG 193

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A +  SGQ++T GD +    GH +     + P+ VE+LKG+    V+ G+  T  +
Sbjct: 194 TWHTALITSSGQLYTFGDGTFGVLGHGNRASCSY-PKEVESLKGLRTISVSCGVWHTAAV 252

Query: 233 ---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
                       G + T G     +LGHGD   +  P  I  L +  +  + A G +  +
Sbjct: 253 VEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDY-NFHKAACGHTLTI 311

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L ++G
Sbjct: 312 GLTTSGHIFTVGSSVYGQLGN-PNNDGRYPRLVEE-QLGGGGVVEVACGSYHVAVLTNAG 369

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
            VYTWGKG  G LGHGD  D+ +P  + +L+     +V
Sbjct: 370 EVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRV 407



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 19/287 (6%)

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
           D S++  G   T   +  P+ +E+   +    V  G+     +T +  V T G    G+L
Sbjct: 54  DRSAYSPG---TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRL 110

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 307
           GHG   +   P+ +  L  + +V  IA G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 111 GHGTGTNVFQPRLVESLS-ICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 169

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
                P+ + +    G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P
Sbjct: 170 VSHWIPKRV-SGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYP 228

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDK 418
           + + SLK    + V      T  +V+         +G ++ +G      LG  DR     
Sbjct: 229 KEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSK-- 286

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            L+P  + SL  ++  + + G   T+ +T  G +F  G +   QLG+
Sbjct: 287 -LKPTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSSVYGQLGN 332



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 4/174 (2%)

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   D L P+ +++     + V  V+ G +H   +     V+TWG+   G LGHG   + 
Sbjct: 61  GTTTDVLVPKPLES--NVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNV 118

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-R 423
             P  + SL       +   +  T  +  TG +Y +G  G  + G    G +     P R
Sbjct: 119 FQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKR 177

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   L    VS +S G +HT ++T  G+L+ FGD     LGH     C  P E+
Sbjct: 178 VSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEV 231


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 130  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4049 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4107

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4108 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166

Query: 248  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4167 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4225

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4226 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4285

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
              + SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4286 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4342

Query: 428  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4343 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4389



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4196

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4314

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4374

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4375 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 159/338 (47%), Gaps = 17/338 (5%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VS 170
            + I  G     ++S +  V++CG    G LG G   T  V           +VV+   V 
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVH 3079

Query: 171  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 229
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 287
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG-RRVVQVACGSRDAQTLALTE 3196

Query: 288  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3254

Query: 348  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 3255 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3314

Query: 408  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3315 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3349



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 17/294 (5%)

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 234
             V Q G+V+ CG+ ++   G   T N P+  P  +  L+    K+V   +G      LT+
Sbjct: 3033 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLRQYVVKKVAVHSGGKHALALTL 3090

Query: 235  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 3091 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 3147

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 350
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 3148 TWGLGEYGRLGHGDNTTQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 3206 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3264

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3265 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 125/272 (45%), Gaps = 10/272 (3%)

Query: 100  VEHSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR- 157
            + H   ++      ++ + +G  H L ++ +  VFS G    G LGHG  TT  +   R 
Sbjct: 3061 LPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRL 3118

Query: 158  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
            +    A  +  V+   +H+A +   G+++T G       GH D N    +P+LV AL G 
Sbjct: 3119 VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD-NTTQLKPKLVTALAGR 3177

Query: 218  PCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
               QV  G     T  LT  G V + G    G+LG G +    TP  I  L  +G VVQI
Sbjct: 3178 RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQI 3236

Query: 276  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
              G  + LA+T  G V+++G G  + LGHG      +P+ I   R  G  V+ V+ G  H
Sbjct: 3237 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALH 3294

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             +A+  +G VY WG    G  G G+      P
Sbjct: 3295 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3326



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 128/285 (44%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  
Sbjct: 4137 KKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVAD 4192

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G   
Sbjct: 4193 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGD 4251

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T
Sbjct: 4252 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALT 4310

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VY
Sbjct: 4311 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVY 4368

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4369 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 15/269 (5%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 695

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 696 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 755

Query: 304 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
           +G  +  LQP  +++  R    V RV AG +  VAL S G +YTWGK  C  LGH   ++
Sbjct: 756 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQLYTWGKATC--LGH-QLVE 808

Query: 364 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           +     ++P  +SSL+    V V         L  +G V+G+G      +  P    S+ 
Sbjct: 809 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 867

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           +LR  IL SL     S I+     ++V T
Sbjct: 868 LLRTPILVSLPTFPASGIACTSAQSLVWT 896



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 12/245 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 3043

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G+N  LG G  H+   P  +   R+  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 3163

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3164 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3220

Query: 473  EPTEI 477
             P EI
Sbjct: 3221 TPHEI 3225



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)

Query: 231 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 628 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 686

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746

Query: 349 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           G G  G LG+G+    +   L E L  ++     +V A  + +  L   G +Y +G    
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSVALSSEGQLYTWGKATC 801

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
                 +R V    + PR++ SL+   +  ++  + H + ++  G +FG+G N+  Q+
Sbjct: 802 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 281
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4042 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4093

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4094 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4153

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4154 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4213

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4214 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LG     GC  P +I
Sbjct: 4271 YGKLGRGGSDGCKLPYKI 4288



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 15/205 (7%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           + Q+A   + ML ++  G +Y++               E +P  ++         +    
Sbjct: 574 IKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHDVFISIAGHC 623

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
              H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      +  +
Sbjct: 624 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR 449
              G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  
Sbjct: 684 TCGGNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740

Query: 450 GRLFGFGDNERAQLGHDTLRGCLEP 474
           G +F +GD +  +LG+    G L+P
Sbjct: 741 GLVFAWGDGDYGKLGNGNCNGSLQP 765



 Score = 45.1 bits (105), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4039 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4098

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4099 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4155

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+ E  +LGH
Sbjct: 4156 EVYAWGEGEDGKLGH 4170


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 130  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4045 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4103

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4104 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4162

Query: 248  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4163 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4221

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4222 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4281

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
              + SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4282 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4338

Query: 428  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4339 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4385



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4135 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4192

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4193 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4252

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ VV+V  G +  VAL  SG 
Sbjct: 4253 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4310

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4311 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4370

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4371 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4410



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 158/338 (46%), Gaps = 17/338 (5%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 170
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 3019 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3076

Query: 171  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 229
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3077 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3134

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 287
              ++ +G ++T G   +G+LGHGD + +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 3135 AAISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAG-RRVVQVACGSRDAQTLALTE 3193

Query: 288  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 3194 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3251

Query: 348  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 3252 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3311

Query: 408  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3312 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3346



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 234
             V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 3030 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 3087

Query: 235  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 3088 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 3144

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 350
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 3145 TWGLGEYGRLGHGDNVTQLKPKLVVAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3202

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 3203 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3261

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3262 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3313



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 125/272 (45%), Gaps = 10/272 (3%)

Query: 100  VEHSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR- 157
            + H   ++      ++ + +G  H L ++ +  VFS G    G LGHG  TT  +   R 
Sbjct: 3058 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRL 3115

Query: 158  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
            +    A  +  V+   +H+A +   G+++T G       GH D N    +P+LV AL G 
Sbjct: 3116 VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD-NVTQLKPKLVVALAGR 3174

Query: 218  PCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
               QV  G     T  LT  G V + G    G+LG G +    TP  I  L  +G VVQI
Sbjct: 3175 RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQI 3233

Query: 276  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
              G  + LA+T  G V+++G G  + LGHG      +P+ I   R  G  V+ V+ G  H
Sbjct: 3234 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALH 3291

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             +A+  +G VY WG    G  G G+      P
Sbjct: 3292 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3323



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 128/285 (44%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  
Sbjct: 4133 KKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVAD 4188

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G   
Sbjct: 4189 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGD 4247

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T
Sbjct: 4248 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALT 4306

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VY
Sbjct: 4307 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVY 4364

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4365 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4409



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 132/269 (49%), Gaps = 15/269 (5%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 634 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 692

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 693 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 752

Query: 304 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
           +G  +  LQP  +++  R    V RV AG +  +AL S G +Y+WGK  C  LGH   ++
Sbjct: 753 NGNCNGSLQPILVESLPR----VQRVFAGSQFSLALSSEGQLYSWGKATC--LGH-QLVE 805

Query: 364 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           +     ++P  +SSL+    V V         L  +G V+G+G      +  P    S+ 
Sbjct: 806 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 864

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           +LR  IL SL     S I+     ++V T
Sbjct: 865 LLRTPILVSLPTFPASGIACTSAQSLVWT 893



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)

Query: 231 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 625 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 683

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 684 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 743

Query: 349 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           G G  G LG+G+    +   L E L  ++     +V A  + +  L   G +Y +G    
Sbjct: 744 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSLALSSEGQLYSWGKATC 798

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
                 +R V    + PR++ SL+   +  ++  + H + ++  G +FG+G N+  Q+
Sbjct: 799 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 855



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 3040

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3041 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3100

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3101 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNV 3160

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3161 TQ---LKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3217

Query: 473  EPTEI 477
             P EI
Sbjct: 3218 TPHEI 3222



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 281
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4038 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4089

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4090 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4149

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4150 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4209

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4210 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4266

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LG     GC  P +I
Sbjct: 4267 YGKLGRGGSDGCKLPYKI 4284



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 15/205 (7%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           + Q+A   + ML ++  G +Y++               E +P  ++    +    +    
Sbjct: 571 IKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHEVFISIAGHC 620

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
              H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      +  +
Sbjct: 621 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 680

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR 449
              G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  
Sbjct: 681 TCGGNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 737

Query: 450 GRLFGFGDNERAQLGHDTLRGCLEP 474
           G +F +GD +  +LG+    G L+P
Sbjct: 738 GLVFAWGDGDYGKLGNGNCNGSLQP 762



 Score = 45.1 bits (105), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4035 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4094

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4095 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4151

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+ E  +LGH
Sbjct: 4152 EVYAWGEGEDGKLGH 4166


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 147/313 (46%), Gaps = 21/313 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  +S    HAA + + G+VF  G+ S    GH+  +  +  P++VE+L GV  K V  G
Sbjct: 307 VTNISLGRKHAALITKRGEVFCWGEGSRGKLGHK-VDMDVSSPKMVESLDGVHVKSVACG 365

Query: 226 LNFTGFLTIRGHVHTCGSNTHG-QLGHGD-TLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  LT  G ++  G N +G  LG  + +  +  P+ I+ PL  V  ++ +A G  + 
Sbjct: 366 EYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGV-CILNVACGDWHT 424

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 341
             V+ +G ++++G GS   LGHG      QP+ +++   KG+ V  V+ G  H  A+   
Sbjct: 425 AIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESL--KGLLVKSVACGSWHTAAIVDI 482

Query: 342 ----------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                      G ++TWG G  G LGH D   K LP  ++ L      QV   +  T  L
Sbjct: 483 IVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLTVAL 542

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
            +TG VY  G    G LG P       V+   +   L+   V +IS+G YH   +T  G 
Sbjct: 543 TNTGKVYTMGSSVHGQLGNPHAKDKSIVI---VEGKLKEEFVKEISSGSYHVAALTSSGS 599

Query: 452 LFGFGDNERAQLG 464
           L+ +G     QLG
Sbjct: 600 LYTWGKGTNGQLG 612



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 144/308 (46%), Gaps = 29/308 (9%)

Query: 103 SSDIVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGV-LGHGPETTQCVSFTRIN 159
           S  +VE+  G  ++ +  G Y T  +++S  +++ G +  G  LG    +       RI+
Sbjct: 347 SPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRIS 406

Query: 160 FP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
            P +   ++ V+  + H A V  SGQ+FT GD S    GH +    + +P+ VE+LKG+ 
Sbjct: 407 GPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNL-LSVSQPKEVESLKGLL 465

Query: 219 CKQVTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
            K V  G   T            F  + G + T G    G+LGH D   +  P  +A L 
Sbjct: 466 VKSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLV 525

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           E+    Q++ G    +A+T  G VY+ GS  +  LG+    D  +   I   + K   V 
Sbjct: 526 EL-DFDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGNPHAKD--KSIVIVEGKLKEEFVK 582

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----------SHL 377
            +S+G  HV AL SSG +YTWGKG  G LG G+  D+  P  + +L+          S+L
Sbjct: 583 EISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQSIACGSNL 642

Query: 378 AVQVCARK 385
              +C  K
Sbjct: 643 TAAICLHK 650



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 22/273 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+L+E+   +    ++ G      +T RG V   G  + G+LGH   +D  +PK +  L+
Sbjct: 296 PKLLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLD 355

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQ-HDELQPRAIQTFRRKG 323
            V  V  +A G     A+T +G +Y++G    G+N  LG  E+   +  PR I +    G
Sbjct: 356 GV-HVKSVACGEYQTCALTDSGELYAWGENKYGAN--LGCEERSRSQWLPRRI-SGPLTG 411

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + ++ V+ GD H   + SSG ++T+G G  G LGHG+ +  + P+ + SLK  L   V  
Sbjct: 412 VCILNVACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVAC 471

Query: 384 RKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
               T  +VD            G ++ +G    G LG  D    +K L P  +  L    
Sbjct: 472 GSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADL---EKKLLPTCVAQLVELD 528

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             Q+S G   TV +T+ G+++  G +   QLG+
Sbjct: 529 FDQVSCGRMLTVALTNTGKVYTMGSSVHGQLGN 561



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 19/218 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   +T  G V+ +G GS   LGH    D   P+ +++    G+HV  V+ 
Sbjct: 307 VTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESL--DGVHVKSVAC 364

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLS-SLKSHLAVQVCARKRKT 388
           G+    AL  SG +Y WG+   GA    +E  ++  LP  +S  L     + V      T
Sbjct: 365 GEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHT 424

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV---- 444
            ++  +G ++ +G   FG LG    G    V +P+ ++SL+   V  ++ G +HT     
Sbjct: 425 AIVSSSGQLFTYGDGSFGVLG---HGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVD 481

Query: 445 VVTDR-------GRLFGFGDNERAQLGHDTLRGCLEPT 475
           ++ DR       G+LF +GD ++ +LGH  L   L PT
Sbjct: 482 IIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPT 519



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 6/196 (3%)

Query: 285 VTGNGV-VYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           + G GV V + G   N F   + +Q D L P+ +++     + V  +S G +H   +   
Sbjct: 266 IWGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLESTVM--LDVTNISLGRKHAALITKR 323

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V+ WG+G  G LGH  ++D + P+ + SL       V   + +T  L D+G +Y +G 
Sbjct: 324 GEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGE 383

Query: 403 MGFGS-LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
             +G+ LG  +R  S  + R RI   L    +  ++ G +HT +V+  G+LF +GD    
Sbjct: 384 NKYGANLGCEERSRSQWLPR-RISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDGSFG 442

Query: 462 QLGHDTLRGCLEPTEI 477
            LGH  L    +P E+
Sbjct: 443 VLGHGNLLSVSQPKEV 458


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 161/337 (47%), Gaps = 15/337 (4%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 170
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 3097 IHIAGGSKSLFVVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3154

Query: 171  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            +   HA  +   G+VF+ G+      GH + +  + +PRLVEAL+    + +  G + + 
Sbjct: 3155 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRST-LDKPRLVEALRAKKIRDIACGSSHSA 3213

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGN 288
             ++ +G ++T G   +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +
Sbjct: 3214 AISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALSG-RRVIQVACGSRDAQTLALTED 3272

Query: 289  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
            G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +G V+TW
Sbjct: 3273 GAVFSWGDGDFGKLGRGGSEGSSTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTW 3330

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            GKG    LGHG +     P+P++ L+ H  + V         + D G VY +G    G  
Sbjct: 3331 GKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQ 3390

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3391 GSGNTFVNKK---PALVIGLDAVIVNRVACGSSHSMA 3424



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 130  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4214 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4272

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4273 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4331

Query: 248  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4332 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4390

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4391 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4450

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  + V RP+ + +
Sbjct: 4451 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVEHVRRPKKVAA 4507

Query: 428  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L+   +  I+TG  H V  +D G +F +GDN+  QLG  T+     P
Sbjct: 4508 LQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRP 4554



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4304 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4361

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4362 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4421

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4422 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4479

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG       P+ +++L+    + +           D G V+ +G   
Sbjct: 4480 VYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDND 4539

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4540 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4579



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 140/293 (47%), Gaps = 17/293 (5%)

Query: 179  VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 235
            V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+ 
Sbjct: 3109 VSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTLD 3166

Query: 236  GHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            G V + G    G+LGHG+  TLD+P    +        +  IA G S+  A++  G +Y+
Sbjct: 3167 GKVFSWGEGEDGKLGHGNRSTLDKP---RLVEALRAKKIRDIACGSSHSAAISSQGELYT 3223

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKG 351
            +G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG G
Sbjct: 3224 WGLGEYGRLGHGDNATQLKPKLVAAL--SGRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3281

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
              G LG G     + P  +  L     +Q+    + +  L   G V+ +G   +  LG  
Sbjct: 3282 DFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG-- 3339

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              G    V +P+ +  LR H V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3340 -HGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3391



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 125/272 (45%), Gaps = 10/272 (3%)

Query: 100  VEHSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR- 157
            + H   ++      ++ + +G  H L ++ +  VFS G    G LGHG  +T  +   R 
Sbjct: 3136 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRL 3193

Query: 158  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
            +    A  +  ++   +H+A +   G+++T G       GH D N    +P+LV AL G 
Sbjct: 3194 VEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVAALSGR 3252

Query: 218  PCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
               QV  G     T  LT  G V + G    G+LG G +    TP  I  L  +G V+QI
Sbjct: 3253 RVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIG-VIQI 3311

Query: 276  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
              G  + LA+T  G V+++G G  + LGHG      +P+ I   R  G  V+ V+ G  H
Sbjct: 3312 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLR--GHRVIHVAVGALH 3369

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             +A+  +G VY WG    G  G G+      P
Sbjct: 3370 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3401



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  
Sbjct: 4302 KKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVAD 4357

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G   
Sbjct: 4358 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGD 4416

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T
Sbjct: 4417 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALT 4475

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G V+
Sbjct: 4476 KSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVF 4533

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4534 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4578



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 7/238 (2%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
           + ++ G     +LGHGD   R  P  I  L  V  V  +  G SY  A+T  G +Y++G 
Sbjct: 666 NAYSWGVGDSRRLGHGDCHARELPTKIESL--VRLVKSVYCGCSYSAAITLGGNLYTWGR 723

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           G+   LGHG   D+  P  +   +   +  V + +GD H + L S G V+ WG G  G L
Sbjct: 724 GTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKL 783

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           G+G      LP+ +  L      +V A  + +  L   G +Y +G          +R V 
Sbjct: 784 GNGSCNSSLLPQLIDCLPR--VQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQ 841

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
              + PR++  L+   +  ++ G+ H + ++  G +FG+G N+  Q+   ++  C EP
Sbjct: 842 GCSV-PRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQICPASV--CSEP 896



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 10/244 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            V   G N   QLG   G  +  PT    +P       + IA G   +  V+ +G VY+ G
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVKVPT---FSPTISRLRPIHIAGGSKSLFVVSQDGKVYACG 3119

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G 
Sbjct: 3120 EGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGK 3179

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+      P  + +L++     +      +  +   G +Y +G   +G LG  D   
Sbjct: 3180 LGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNAT 3239

Query: 416  SDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G   
Sbjct: 3240 Q---LKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSST 3296

Query: 474  PTEI 477
            P EI
Sbjct: 3297 PHEI 3300



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 281
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4207 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4258

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4259 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4318

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4319 DGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4378

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4379 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4435

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LG     GC  P +I
Sbjct: 4436 YGKLGRGGSDGCKLPYKI 4453



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 123/250 (49%), Gaps = 15/250 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P  +E+L  +  K V  G +++  +T+ G+++T G  T+G+LGHG + D+  P  +  L+
Sbjct: 689 PTKIESLVRL-VKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALK 747

Query: 268 EVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
           +   V V + +G ++ L +T  G+V+++G G    LG+G  +  L P+ I    R    V
Sbjct: 748 DHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPR----V 803

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-----TLPEPLSSLKSHLAVQV 381
            RV AG +  +AL   G +Y+WGK  C  LGH   +++     ++P  ++ L+    V V
Sbjct: 804 QRVFAGAQFSLALSCEGQLYSWGKASC--LGH-QLVERNVQGCSVPRLITGLQHKRIVDV 860

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
                    L  +G ++G+G      +  P    S+ +LR  I  +L     S I+    
Sbjct: 861 AVGVAHCLALSSSGEIFGWGRNDNQQI-CPASVCSEPLLRQPIQVTLPTLPASGIACTAA 919

Query: 442 HTVVVTDRGR 451
            +++ T   R
Sbjct: 920 QSLIWTQSTR 929



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 13/184 (7%)

Query: 122 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 180
           Y   +    ++++ G    G LGHG    QC+    +       V V + + + H   + 
Sbjct: 708 YSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLT 767

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             G VF  GD      G+   N  +  P+L++ L  V  ++V AG  F+  L+  G +++
Sbjct: 768 SEGLVFAWGDGDYGKLGNGSCNSSLL-PQLIDCLPRV--QRVFAGAQFSLALSCEGQLYS 824

Query: 241 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G  +   LGH   ++R       P+ I  L+    +V +A G ++ LA++ +G ++ +G
Sbjct: 825 WGKASC--LGH-QLVERNVQGCSVPRLITGLQH-KRIVDVAVGVAHCLALSSSGEIFGWG 880

Query: 296 SGSN 299
              N
Sbjct: 881 RNDN 884



 Score = 44.7 bits (104), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4204 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4263

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4264 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4320

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+ E  +LGH
Sbjct: 4321 EVYAWGEGEDGKLGH 4335


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 146/293 (49%), Gaps = 10/293 (3%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV+   ++N A       +VF  G NSS       T      PRLV +L  V  +QV AG
Sbjct: 325 VVRTPLNQNSAELPQPLSEVFMWGSNSSNQHAEGATEVTDI-PRLVRSLSDV--QQVEAG 381

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              T  +  +G V  CG N++G+LG G++ ++P PK I    ++  V        + LA+
Sbjct: 382 QYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLAL 441

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G VYS+G G    LGHG+     +P+ IQ  F  K I +  VSAG  H  A+ S G 
Sbjct: 442 SDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIEL--VSAGYRHSAAVTSDGQ 499

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWM 403
           +YTWG+G  G LGHGD   + +P  + SL    +    C          D  +V+ FG  
Sbjct: 500 LYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSG 559

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
             G LG    G + ++ +P+ ++ LR + + +++ G++ +V +T  G +F +G
Sbjct: 560 DNGKLG---HGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWG 609



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 169/348 (48%), Gaps = 24/348 (6%)

Query: 110 SAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 168
           S  +  Q+  G+Y T +I +   V +CG +  G LG G  + Q V   RIN      + Q
Sbjct: 371 SLSDVQQVEAGQYCTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVP-KRINI--NCKIKQ 427

Query: 169 VSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVE-ALKGVPCKQV 222
           VS+S   + H+  +  +G+V++ GD      GH D  T++    P+L++    G   + V
Sbjct: 428 VSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATHK---EPKLIQGPFIGKVIELV 484

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
           +AG   +  +T  G ++T G   HG+LGHGD   R  P  +  L ++  V  +A G ++ 
Sbjct: 485 SAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDM-PVGYVACGSTHT 543

Query: 283 LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA + +G  V+SFGSG N  LGHG      +P+ I+  R   I   +V+AG    VAL  
Sbjct: 544 LACSRDGNTVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIK--KVAAGIHFSVALTC 601

Query: 342 SGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           +G V+TWG+G    LG G  EI    P  +  L   + + +         L    +VY +
Sbjct: 602 TGEVFTWGQG--SNLGCGSSEITLFSPAVVEDLMQQMIIDISVGDSHCLALTRNCAVYAW 659

Query: 401 GWMGFGSLGFPDRGVS-DKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           G  G G  G   +G S   V RP  + +L    ++QIS G  H+V  T
Sbjct: 660 GSNGKGQCG---QGHSTSPVSRPSKVINLEGKQINQISAGTSHSVAWT 704



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 22/331 (6%)

Query: 125  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS---ENHAAFVLQ 181
            +L S  +V SCG    G LGHG  +    + T I+      + QVS S   + H+  + +
Sbjct: 3440 VLTSQGTVLSCGEGNYGRLGHG-HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTE 3498

Query: 182  SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
            +G+VF+ GD      GH +  R   +P+L+E+L  V   QV  G   +  L+  G V+  
Sbjct: 3499 TGEVFSWGDGDFGKLGHGNNERQ-RKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVF 3557

Query: 242  GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
            GS  HG+LG G  +++  P  I   +   ++  IA G ++ + + G  VV++FG G    
Sbjct: 3558 GSAEHGKLGLGGHINKKRPTKIVH-KGFLNIKYIACGQNHTICI-GENVVWAFGEGEGGK 3615

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LG G + D   P+ I T   K I   +   G+   + L   G +Y+     CG+    D 
Sbjct: 3616 LGIGSKKDIYVPQEIITLNGKNIK--KAYCGNGFTMFLSEDGELYS-----CGSDNLQDA 3668

Query: 362  ID-----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
             D     K +PE +   +  +   V        VL   G V+ +G    G LGF   G  
Sbjct: 3669 TDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGF---GHD 3725

Query: 417  DKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
              V +P I+  L   ++ QI+T   H    T
Sbjct: 3726 LPVQKPMIIQILSDKNIKQIATSRTHCAAWT 3756



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 14/298 (4%)

Query: 175  HAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-- 231
            +  FVL S G V +CG+ +    GH  ++  +    ++ AL+G    QV+  +   G   
Sbjct: 3436 NCTFVLTSQGTVLSCGEGNYGRLGHGHSDS-LPNLTMISALQGFVITQVSTSIGSDGHSL 3494

Query: 232  -LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             LT  G V + G    G+LGHG+   +  PK I  L +V  V+Q+A G  +   ++ +G 
Sbjct: 3495 ALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDV-VVIQVACGHKHSAVLSQDGE 3553

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            VY FGS  +  LG G   ++ +P  I    +  +++  ++ G  H + +     V+ +G+
Sbjct: 3554 VYVFGSAEHGKLGLGGHINKKRPTKI--VHKGFLNIKYIACGQNHTICI-GENVVWAFGE 3610

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  G LG G + D  +P+ + +L      +       T  L + G +Y  G         
Sbjct: 3611 GEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQDAT- 3669

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL--GHD 466
             D   ++K++  +I +  +   V+ ++TG  H +V+T RG ++ +G+N    L  GHD
Sbjct: 3670 -DVLYTEKLIPEKIFE-FQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHD 3725



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 123/276 (44%), Gaps = 10/276 (3%)

Query: 205  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
            I+ P  ++  K    +++  G N T  LT +G V +CG   +G+LGHG +   P    I+
Sbjct: 3416 IWSPIKIQNFK--IAQRIVCGQNCTFVLTSQGTVLSCGEGNYGRLGHGHSDSLPNLTMIS 3473

Query: 265  PLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
             L+   +  V        + LA+T  G V+S+G G    LGHG    + +P+ I++    
Sbjct: 3474 ALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLY-- 3531

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
             + V++V+ G +H   L   G VY +G    G LG G  I+K  P  +   K  L ++  
Sbjct: 3532 DVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKIVH-KGFLNIKYI 3590

Query: 383  ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
            A  +   + +    V+ FG    G LG    G    +  P+ + +L   ++ +   G   
Sbjct: 3591 ACGQNHTICIGENVVWAFGEGEGGKLGI---GSKKDIYVPQEIITLNGKNIKKAYCGNGF 3647

Query: 443  TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            T+ +++ G L+  G +             L P +IF
Sbjct: 3648 TMFLSEDGELYSCGSDNLQDATDVLYTEKLIPEKIF 3683



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 15/243 (6%)

Query: 242  GSNTHGQLGH---GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            G+  +GQLG    G  ++  +P  I   +      +I  G +    +T  G V S G G+
Sbjct: 3398 GNGRNGQLGDTAVGQCINIWSPIKI---QNFKIAQRIVCGQNCTFVLTSQGTVLSCGEGN 3454

Query: 299  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG---DEHVVALDSSGYVYTWGKGYCGA 355
               LGHG  H +  P        +G  + +VS     D H +AL  +G V++WG G  G 
Sbjct: 3455 YGRLGHG--HSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGDFGK 3512

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P+ + SL   + +QV    + + VL   G VY FG    G LG    G 
Sbjct: 3513 LGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGL---GG 3569

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
                 RP  +      ++  I+ G  HT+ + +   ++ FG+ E  +LG  + +    P 
Sbjct: 3570 HINKKRPTKIVHKGFLNIKYIACGQNHTICIGE-NVVWAFGEGEGGKLGIGSKKDIYVPQ 3628

Query: 476  EIF 478
            EI 
Sbjct: 3629 EII 3631



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 102/245 (41%), Gaps = 11/245 (4%)

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
             V   GSN+  Q   G T     P+ +  L +V    Q+ AG      +   G V + G
Sbjct: 342 SEVFMWGSNSSNQHAEGATEVTDIPRLVRSLSDVQ---QVEAGQYCTFIIDTKGCVSACG 398

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCG 354
             S   LG G   ++  P+ I    +  I  V  S G D H +AL  +G VY+WG G  G
Sbjct: 399 KNSYGRLGLGNSSNQPVPKRININCK--IKQVSSSKGCDGHSLALSDTGEVYSWGDGDYG 456

Query: 355 ALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LGHGD      P+ +       +   V A  R +  +   G +Y +G    G LG    
Sbjct: 457 KLGHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWGEGDHGRLG---H 513

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLGHDTLRGCL 472
           G  +    P ++ SL    V  ++ G  HT+  +  G  ++ FG  +  +LGH       
Sbjct: 514 GDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDNGKLGHGNTIRLY 573

Query: 473 EPTEI 477
           +P +I
Sbjct: 574 KPQKI 578


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 166/345 (48%), Gaps = 20/345 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4017 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4075

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 4076 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4134

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGS------VVQIAAGPSYML 283
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G       +  +A G ++ L
Sbjct: 4135 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTL 4194

Query: 284  AVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            AV+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   
Sbjct: 4195 AVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKD 4252

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            G VYT+G+     L  G   +   P+ +  L   +   V      T  L  TG +Y +G 
Sbjct: 4253 GQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGS 4312

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
               G LG    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4313 NSEGQLGL---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 151/332 (45%), Gaps = 20/332 (6%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4010 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4067

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 4068 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4126

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--------RRKGIHVVR 328
             G  +   VT +G +++FG+G    LG G   ++  P  +           R K I +  
Sbjct: 4127 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSI-ICS 4185

Query: 329  VSAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            V+ G  H +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + 
Sbjct: 4186 VACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4245

Query: 388  TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            +  L   G VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +T
Sbjct: 4246 SVALTKDGQVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALT 4302

Query: 448  DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
              G ++ +G N   QLG        EPT + +
Sbjct: 4303 STGDIYAWGSNSEGQLGLGHTNHVREPTLVTV 4334



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    L++T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLSLTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      QV A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQVSA 725



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 20/239 (8%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3985 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4039

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4040 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4099

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4100 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4157

Query: 416  SDKVLRPRILDSLRAHHVSQ---------ISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  + + Q         ++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 4158 SNKKL-PERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4215



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3985 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4041

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4042 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4098

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4099 KLGHGNSDRQRRPRQIEALQGEE 4121



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V+  G+N
Sbjct: 635 VYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNN 692

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           S   CG  ++  PI +P+ V  L G+  +QV+AG
Sbjct: 693 SMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAG 726


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 150/323 (46%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V     HAA V ++G+VFT G+ S    GH      +  PRLVE+L       V  G
Sbjct: 79  VYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVH-PRLVESLAICNVDIVACG 137

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  +T  G ++T G  TH  G LG+G  +    PK I+   E   V  ++ G  +  
Sbjct: 138 EFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTWHTA 197

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 339
            VT  G +++FG G+   LGHG +     PR +++    G+  + V+ G  H  A+    
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESL--SGLKTIAVACGVWHTAAVVEVI 255

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SSG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L 
Sbjct: 256 VTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFCRIACGHSLTVGLT 315

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G +   G   +G LG P    SD  L P +++ +   HV Q++ G YH  V+T++  +
Sbjct: 316 TSGQILSMGNTVYGQLGNPR---SDGKL-PCLVEDIMGEHVVQVACGSYHVAVLTNKSEV 371

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           F +G     +LGH  +     PT
Sbjct: 372 FTWGKGANGRLGHGDIEDRKIPT 394



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVSAS 172
           +  G +HT  ++ +     +  G+   G+LG+G + +  +   RI+     H V  VS  
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIP-KRISGALEGHQVAYVSCG 192

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGF 231
             H A V   GQ+FT GD +    GH   NR  F  PR VE+L G+    V  G+  T  
Sbjct: 193 TWHTALVTSRGQLFTFGDGTFGVLGH--GNRESFSCPREVESLSGLKTIAVACGVWHTAA 250

Query: 232 LT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           +              G + T G     +LGHGD   R  P  +A L +     +IA G S
Sbjct: 251 VVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFCRIACGHS 309

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             + +T +G + S G+     LG+     +L P  ++     G HVV+V+ G  HV  L 
Sbjct: 310 LTVGLTTSGQILSMGNTVYGQLGNPRSDGKL-PCLVEDI--MGEHVVQVACGSYHVAVLT 366

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           +   V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 367 NKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALR 400



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T K+      PLE   V  V  +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVIRSTGKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGS 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR +++     + +  V+ G+ H  A+ ++G +YTWG G    G LG+G ++  
Sbjct: 114 REDSVHPRLVESLAICNVDI--VACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSH 171

Query: 365 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P+ +S +L+ H    V      T ++   G ++ FG   FG LG  +R   +    PR
Sbjct: 172 WIPKRISGALEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNR---ESFSCPR 228

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT  V +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRL 288

Query: 473 EPT 475
           +PT
Sbjct: 289 KPT 291



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 146/347 (42%), Gaps = 37/347 (10%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASE 173
           ++  L+  N  VF+ G    G LGHG       P   + ++   ++         V+  E
Sbjct: 87  KHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDI--------VACGE 138

Query: 174 NHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            H   V  +G+++T GD   N        D +  I + R+  AL+G     V+ G   T 
Sbjct: 139 FHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPK-RISGALEGHQVAYVSCGTWHTA 197

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT---- 286
            +T RG + T G  T G LGHG+      P+ +  L  + ++  +A G  +  AV     
Sbjct: 198 LVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIA-VACGVWHTAAVVEVIV 256

Query: 287 -------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
                   +G ++++G G    LGHG++   L+P  + +         R++ G    V L
Sbjct: 257 TQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASL--IDYDFCRIACGHSLTVGL 314

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
            +SG + + G    G LG+    D  LP  +  +     VQV        VL +   V+ 
Sbjct: 315 TTSGQILSMGNTVYGQLGN-PRSDGKLPCLVEDIMGEHVVQVACGSYHVAVLTNKSEVFT 373

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           +G    G LG  D  + D+ + P ++++LR   V  I+ G   T  +
Sbjct: 374 WGKGANGRLGHGD--IEDRKI-PTLVEALRDRGVRHIACGSNFTSAI 417



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 18/278 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ +E+   +    V  G+     +T  G V T G  + G+LGHG   D   P+ +  L 
Sbjct: 68  PKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESL- 126

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIH 325
            + +V  +A G  +  AVT  G +Y++G G++    LG+G       P+ I +   +G  
Sbjct: 127 AICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRI-SGALEGHQ 185

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  VS G  H   + S G ++T+G G  G LGHG+    + P  + SL     + V    
Sbjct: 186 VAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVACGV 245

Query: 386 RKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
             T  +V+            G ++ +G      LG  D+   +  L+P  + SL  +   
Sbjct: 246 WHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDK---EPRLKPTCVASLIDYDFC 302

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           +I+ G   TV +T  G++   G+    QLG+    G L
Sbjct: 303 RIACGHSLTVGLTTSGQILSMGNTVYGQLGNPRSDGKL 340



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++ G +HT L+ S   +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPR--EVESLSGLKTIAVACGVW 246

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A V++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFCRIA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 281
            G + T  LT  G + + G+  +GQLG+     R   K    +E++    VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGQILSMGNTVYGQLGN----PRSDGKLPCLVEDIMGEHVVQVACGSYH 361

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
           +  +T    V+++G G+N  LGHG+  D   P  ++  R +G+
Sbjct: 362 VAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGV 404



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 4/170 (2%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L P+ +++  +  + V  V  G +H   +  +G V+TWG+   G LGHG   D   P 
Sbjct: 64  DFLLPKPLES--KLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPR 121

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDS 427
            + SL       V   +  T  +   G +Y +G  G  ++G    G       P RI  +
Sbjct: 122 LVESLAICNVDIVACGEFHTCAVTTAGELYTWG-DGTHNIGLLGNGTDVSHWIPKRISGA 180

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           L  H V+ +S G +HT +VT RG+LF FGD     LGH        P E+
Sbjct: 181 LEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREV 230



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 24/141 (17%)

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCG---------ALGHGDEIDKTLPEPLSSLKSHLAVQ 380
           SA D++    DSSG VY WG+  C           +    + D  LP+P   L+S L + 
Sbjct: 26  SAQDDY----DSSGDVYVWGEVICDNTVRVGPDTVIRSTGKADFLLPKP---LESKLVLD 78

Query: 381 V----CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
           V    C  K    V    G V+ +G    G LG    G  +  + PR+++SL   +V  +
Sbjct: 79  VYHVDCGVKHAALV-TKNGEVFTWGEESGGRLGH---GSREDSVHPRLVESLAICNVDIV 134

Query: 437 STGLYHTVVVTDRGRLFGFGD 457
           + G +HT  VT  G L+ +GD
Sbjct: 135 ACGEFHTCAVTTAGELYTWGD 155


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 166/343 (48%), Gaps = 18/343 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 2656 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 2714

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 2715 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 2773

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSV----VQIAAGPSYMLAV 285
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G        +A G ++ LAV
Sbjct: 2774 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAV 2833

Query: 286  TGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            + +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+
Sbjct: 2834 STDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGH 2891

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYT+G+     L  G   +   P+ +  L   +   V      T  L  TG VY +G   
Sbjct: 2892 VYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNS 2951

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G ++ V  P ++  L+  ++ QIS G  H+   T
Sbjct: 2952 EGQLGL---GHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 2991



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 147/329 (44%), Gaps = 16/329 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 2649 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 2706

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 2707 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 2765

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-----HVVRVSA 331
             G  +   VT +G +++FG+G    LG G   ++  P  +       I         V+ 
Sbjct: 2766 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVAC 2825

Query: 332  GDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
            G  H +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  
Sbjct: 2826 GLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVA 2885

Query: 391  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
            L   G VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G
Sbjct: 2886 LTKDGHVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTG 2942

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
             ++ +G N   QLG        EPT + +
Sbjct: 2943 DVYAWGSNSEGQLGLGHTNHVREPTLVTV 2971



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 18/237 (7%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V   G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 2624 VFLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 2678

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 2679 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 2738

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 2739 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 2796

Query: 416  SDKVLRPRILDSLRAHHVSQ-------ISTGLYHTVVV-TDRGRLFGFGDNERAQLG 464
            S+K L P  + +L  + + Q       ++ GL HT+ V TD   ++ FGD +  +LG
Sbjct: 2797 SNKKL-PERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLG 2852



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            V+ WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 2624 VFLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 2680

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 2681 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 2737

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 2738 KLGHGNSDRQRRPRQIEALQGEE 2760


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 158/338 (46%), Gaps = 17/338 (5%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 170
            + I+ G     ++S +  VF+CG    G LG G   T  V       +        V V 
Sbjct: 3063 IHISGGSKSLFIVSQDGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3120

Query: 171  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 229
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 3121 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3178

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 287
              ++ +G ++T G   +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T 
Sbjct: 3179 AAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAG-RRVIQVACGSRDAQTLALTE 3237

Query: 288  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            +G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +G V+T
Sbjct: 3238 DGAVFSWGDGDFGKLGRGGSEGSATPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWT 3295

Query: 348  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 3296 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3355

Query: 408  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3356 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3390



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 130  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4146 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4204

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4205 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4263

Query: 248  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4264 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDS 4322

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4323 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4382

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4383 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4439

Query: 428  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4440 LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4486



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4236 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4293

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4294 SAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4353

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4354 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4411

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG       P+ +++L+    + +           D G VY +G   
Sbjct: 4412 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDND 4471

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4472 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4511



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 141/305 (46%), Gaps = 17/305 (5%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT-- 223
            + +S        V Q G+VF CG+ ++   G   T N P+  P  +  L     K+V   
Sbjct: 3063 IHISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVH 3120

Query: 224  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            +G      LT+ G V + G    G+LGHG+  TLD+P    +        +  +A G S+
Sbjct: 3121 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSH 3177

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVAL 339
              A++  G +Y++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL
Sbjct: 3178 SAAISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTAL--AGRRVIQVACGSRDAQTLAL 3235

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
               G V++WG G  G LG G       P  +  L     +Q+    + +  L   G V+ 
Sbjct: 3236 TEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWT 3295

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            +G   +  LG    G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+
Sbjct: 3296 WGKGDYYRLG---HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 3352

Query: 460  RAQLG 464
              Q G
Sbjct: 3353 HGQQG 3357



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 139/307 (45%), Gaps = 30/307 (9%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            V Q++ SE+    + Q G+++ C              +P   P+ +E L       +  
Sbjct: 572 QVKQIACSESLLLLLSQDGKLYNC-----------RLGKPELEPQPIEELAQETILSIAG 620

Query: 225 GLNFTGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
                 FL I  +   ++ G+    +LGHGDT  R  P  I+ L+    V  +  G SY 
Sbjct: 621 HCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISALDRC--VKAVFCGCSYS 678

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            A+T +G +Y++G G+   LGHG   D+  P  +       I  V + +GD H + L S 
Sbjct: 679 AAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSE 738

Query: 343 GYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
           G VY WG G  G LG+G+    +   L E L  ++     ++ A  + +  L   G +Y 
Sbjct: 739 GLVYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQ-----RIFAGAQSSMALTTEGHLYS 793

Query: 400 FG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           +G    +G   +    +G S     PR++ SL+   +  ++ G+ H + +T  G +FG+G
Sbjct: 794 WGKASCLGHQQVERSVQGCS----VPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWG 849

Query: 457 DNERAQL 463
            N+  Q+
Sbjct: 850 RNDSQQI 856



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L +   V++ G    G LGHG      +S+ R   +   +   V  
Sbjct: 4234 KKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVAD 4289

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G   
Sbjct: 4290 IACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGD 4348

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T
Sbjct: 4349 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALT 4407

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VY
Sbjct: 4408 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVY 4465

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4466 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4510



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 281
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4139 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4190

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4191 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4250

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4251 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWG 4310

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4311 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4367

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LG     GC  P +I
Sbjct: 4368 YGKLGRGGSDGCKLPYKI 4385



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            V   G N   QLG   G  +  PT  ++I+ L  +     I+ G   +  V+ +G V++ 
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HISGGSKSLFIVSQDGKVFAC 3084

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3085 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3144

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3145 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3204

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                 L+P+ + +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3205 TQ---LKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSA 3261

Query: 473  EPTEI 477
             P EI
Sbjct: 3262 TPHEI 3266



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 6/167 (3%)

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
           EL+P+ I+   ++ I  +       H +A+DS+   Y+WG G    LGHGD   + +P  
Sbjct: 601 ELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTK 660

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           +S+L   +    C     +  +  +G++Y +G   +G LG    G SD    P I+ +L 
Sbjct: 661 ISALDRCVKAVFCGCS-YSAAITWSGNLYTWGRGTYGRLG---HGNSDDQCVPAIVMALA 716

Query: 430 AHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            + +  ++  +G  H++ +T  G ++ +GD +  +LG+      L+P
Sbjct: 717 EYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQP 763



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 16/237 (6%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+   + SN + +S G+     LGHG    + V  T+I+      V  V    +++A +
Sbjct: 624 GRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP-TKISALDRC-VKAVFCGCSYSAAI 681

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGH 237
             SG ++T G  +    GH +++     P +V AL       V   +G   +  LT  G 
Sbjct: 682 TWSGNLYTWGRGTYGRLGHGNSDDQCV-PAIVMALAEYEIIDVALGSGDAHSLCLTSEGL 740

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V+  G   +G+LG+G+      P  +   E +  V +I AG    +A+T  G +YS+G  
Sbjct: 741 VYAWGDGDYGKLGNGNCNSSLQPILV---ETLPRVQRIFAGAQSSMALTTEGHLYSWGKA 797

Query: 298 SNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           S  CLGH +    +Q    PR + + + K   +V V+ G  H +AL S G V+ WG+
Sbjct: 798 S--CLGHQQVERSVQGCSVPRLVSSLQHK--RLVDVAVGVAHCLALTSCGEVFGWGR 850



 Score = 45.1 bits (105), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4136 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4195

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4196 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4252

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+ E  +LGH
Sbjct: 4253 EVYAWGEGEDGKLGH 4267


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 160/339 (47%), Gaps = 19/339 (5%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 170
            + I  G     ++S +  VF+CG    G LG G   T  V       +        V V 
Sbjct: 2948 IHIAGGSKSLFVVSQDGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 3005

Query: 171  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 229
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + +  G + +
Sbjct: 3006 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDIACGSSHS 3063

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGP--SYMLAVT 286
              ++ +G ++T G   +G+LGHGD   +  PK +  L   GS V+Q+A G   +  LA+T
Sbjct: 3064 AAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTAL--CGSRVIQVACGSRDAQTLALT 3121

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+
Sbjct: 3122 EDGAVFSWGDGDFGKLGRGGSEGSATPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVW 3179

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
            TWGKG    LGHG +     P+P++ L+    + V         + D G VY +G    G
Sbjct: 3180 TWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHG 3239

Query: 407  SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
              G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 3240 QQGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSMA 3275



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 130  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4070 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4128

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4129 YGSGGRLGVGGSDSWSI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4187

Query: 248  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            +LGHG+ L    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4188 KLGHGNRLSYDRPKLLEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4246

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4247 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4306

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4307 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4363

Query: 428  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4364 LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4410



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+V+  G+      GH   NR  + RP+L+E L G+    +  G
Sbjct: 4160 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRLSYDRPKLLEHLNGMSVADIACG 4217

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4218 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4277

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4278 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4335

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG       P+ +++L+    + +           D G VY +G   
Sbjct: 4336 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDND 4395

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4396 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4435



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 138/293 (47%), Gaps = 17/293 (5%)

Query: 179  VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 235
            V Q G+VF CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+ 
Sbjct: 2960 VSQDGKVFACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTLD 3017

Query: 236  GHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            G V + G    G+LGHG+  TLD+P    +        +  IA G S+  A++  G +Y+
Sbjct: 3018 GKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDIACGSSHSAAISSQGELYT 3074

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKG 351
            +G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG G
Sbjct: 3075 WGLGEYGRLGHGDNATQLKPKLVTAL--CGSRVIQVACGSRDAQTLALTEDGAVFSWGDG 3132

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
              G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG  
Sbjct: 3133 DFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG-- 3190

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3191 -HGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3242



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 125/272 (45%), Gaps = 10/272 (3%)

Query: 100  VEHSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR- 157
            + H   ++      ++ + +G  H L ++ +  VFS G    G LGHG  TT  +   R 
Sbjct: 2987 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRL 3044

Query: 158  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
            +    A  +  ++   +H+A +   G+++T G       GH D N    +P+LV AL G 
Sbjct: 3045 VEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVTALCGS 3103

Query: 218  PCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
               QV  G     T  LT  G V + G    G+LG G +    TP  I  L  +G VVQI
Sbjct: 3104 RVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG-VVQI 3162

Query: 276  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
              G  + LA+T  G V+++G G  + LGHG      +P+ I   R  G  V+ V+ G  H
Sbjct: 3163 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALH 3220

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             +A+  +G VY WG    G  G G+      P
Sbjct: 3221 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3252



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  
Sbjct: 4158 KKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----LSYDRPKLLEHLNGMSVAD 4213

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G   
Sbjct: 4214 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGD 4272

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T
Sbjct: 4273 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALT 4331

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VY
Sbjct: 4332 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVY 4389

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4390 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4434



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 7/238 (2%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
           + ++ G+  + +LGHGD   R  P  I  L  V  V  +  G SY  A+T  G +Y++G 
Sbjct: 661 NAYSWGTGDNRRLGHGDCHSRELPTKIESL--VRRVKSVYCGCSYSAAITLRGNLYTWGR 718

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           G+   LGHG   D+  P  +   +   +  V + +GD H + L + G VY WG G  G L
Sbjct: 719 GNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKL 778

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           G+        P  +  L      +V A  + +  L   G +Y +G          +R V 
Sbjct: 779 GNASCNSSLQPLLIECLPR--VQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQ 836

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
              + PR++ SL+   +  ++ G+ H + ++  G +FG+G N+  Q+   ++  C EP
Sbjct: 837 GCSV-PRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQICPASV--CSEP 891



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 24/272 (8%)

Query: 189 GDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           GDN     GH D +    P     LV  +K V C     G +++  +T+RG+++T G   
Sbjct: 668 GDNRRL--GHGDCHSRELPTKIESLVRRVKSVYC-----GCSYSAAITLRGNLYTWGRGN 720

Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
           +G+LGHG + D+  P  +  L++   V V + +G ++ L +T  G+VY++G G    LG+
Sbjct: 721 YGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGN 780

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
              +  LQP  I+   R    V RV AG +  +AL   G +Y+WGK  C  LGH   +++
Sbjct: 781 ASCNSSLQPLLIECLPR----VQRVFAGSQFSLALTGEGQLYSWGKASC--LGH-QLVER 833

Query: 365 -----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
                ++P  ++SL+    V V         L   G ++G+G      +  P    S+ +
Sbjct: 834 NVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI-CPASVCSEPL 892

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
           LR  IL +L     S ++     +++ T   R
Sbjct: 893 LRQPILVTLPTLPASGMACTAVQSLIWTQSSR 924



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G V++ 
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFVVSQDGKVFAC 2969

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 2970 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3029

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+      P  + +L++     +      +  +   G +Y +G   +G LG  D  
Sbjct: 3030 KLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3089

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3090 TQ---LKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSA 3146

Query: 473  EPTEI 477
             P EI
Sbjct: 3147 TPHEI 3151



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 281
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4063 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4114

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4115 LFAVTPDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4174

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G VY WG+G  G LGHG+ +    P+ L  L       +      +  +  +G V  +G
Sbjct: 4175 DGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWG 4234

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4235 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4291

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LG     GC  P +I
Sbjct: 4292 YGKLGRGGSDGCKLPYKI 4309



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVS 330
           V Q+A     +L ++  G +Y++         H  + D E QP        +    +   
Sbjct: 597 VKQVACSKDIVLLLSKEGKLYNW---------HISKPDTEPQPLDFGDIGSETFISIASH 647

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
               H +A+D++   Y+WG G    LGHGD   + LP  + SL   +    C       +
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVRRVKSVYCGCSYSAAI 707

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTD 448
            +  G++Y +G   +G LG    G+SD    P ++ +L+ H V  ++  +G  HT+ +T+
Sbjct: 708 TL-RGNLYTWGRGNYGRLG---HGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTN 763

Query: 449 RGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            G ++ +GD +  +LG+ +    L+P  I
Sbjct: 764 EGLVYAWGDGDYGKLGNASCNSSLQPLLI 792



 Score = 45.1 bits (105), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 13/184 (7%)

Query: 122 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 180
           Y   +    ++++ G    G LGHG    QC+    +       V V + + + H   + 
Sbjct: 703 YSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLT 762

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             G V+  GD      G+   N  + +P L+E L  V  ++V AG  F+  LT  G +++
Sbjct: 763 NEGLVYAWGDGDYGKLGNASCNSSL-QPLLIECLPRV--QRVFAGSQFSLALTGEGQLYS 819

Query: 241 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G  +   LGH   ++R       P+ I  L+    +V +A G ++ LA++  G ++ +G
Sbjct: 820 WGKASC--LGH-QLVERNVQGCSVPRLITSLQH-KRIVDVAVGVTHCLALSSAGEIFGWG 875

Query: 296 SGSN 299
              N
Sbjct: 876 RNDN 879



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4060 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4119

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4120 PDGKLFA---TGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4176

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+ E  +LGH
Sbjct: 4177 EVYAWGEGEDGKLGH 4191


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 124/248 (50%), Gaps = 5/248 (2%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           Q  +G + +  L   G V +CG N+ GQLG   T     P+ I  LE +  V  ++ G  
Sbjct: 27  QAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETL-HVALVSCGKE 85

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           + LAV   G V+++G+ S   LG GE +     P+ I+T    GI +++V+ G  H VAL
Sbjct: 86  HSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL--AGIKIIQVACGHYHSVAL 143

Query: 340 DSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
              G V++WG    G LG G E   +  P+ + SL+     QV A    +F L  +G+ +
Sbjct: 144 SEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSF 203

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           G+G    G L         +  +P  + +L+   V  IS G  HT V+T  G++F FGDN
Sbjct: 204 GWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDN 263

Query: 459 ERAQLGHD 466
              QLGHD
Sbjct: 264 SYGQLGHD 271



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 151/297 (50%), Gaps = 14/297 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           ++Q ++ E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLHVALVSCG 83

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 284
              +  +  +G V   G+ + GQLG G+  +    PK I  L  +  ++Q+A G  + +A
Sbjct: 84  KEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI-KIIQVACGHYHSVA 142

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           ++ +G V+S+G+ S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGHHSFALSLSG 200

Query: 344 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             + WG    G L   G+   + +  P  + +LK+   V +    + T VL   G V+ F
Sbjct: 201 TSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTF 260

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 456
           G   +G LG      + +   P++++ +    VSQI  G  HT+  +   G++  FG
Sbjct: 261 GDNSYGQLG---HDPTAEKRGPQLVERIEG-LVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 136/296 (45%), Gaps = 17/296 (5%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 171
           +Q  +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      HV  VS 
Sbjct: 26  LQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLHVALVSC 82

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV  G   +  
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVA 142

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+  G V + G+N+HGQLG G     + +P+ +  LE +  + Q+AAG  +  A++ +G 
Sbjct: 143 LSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGHHSFALSLSGT 201

Query: 291 VYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             SFG GSN        G+       +P +I   +  G  VV +S G +H   L   G V
Sbjct: 202 --SFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLG--VVSISCGYKHTAVLTQDGKV 257

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +T+G    G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 258 FTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 135/264 (51%), Gaps = 9/264 (3%)

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           +PR +    G+   Q  +G   +  L     V++CG N+ GQLG     +   P+   P+
Sbjct: 11  QPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPE---PI 67

Query: 267 EEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKG 323
           + +G+  +  ++ G  + +AV   G V+++G+GS   LG GE +   L P  I+T    G
Sbjct: 68  QALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTL--GG 125

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVC 382
           I +++VS G  H +AL   G V++WGK   G LG G     +  P+ ++SL+     QV 
Sbjct: 126 IKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVA 185

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
           A    +F L  TG+ YG+G    G L       + ++ +P  +D+L+   V  IS G  H
Sbjct: 186 AGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEH 245

Query: 443 TVVVTDRGRLFGFGDNERAQLGHD 466
           T V+T  G++F FGDN   QL ++
Sbjct: 246 TAVLTKDGQVFTFGDNSSGQLQNN 269



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 148/311 (47%), Gaps = 16/311 (5%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALK 215
           R+N      ++Q ++ E H+  +  + +V++CGDNS    G  R+ N    +P  ++AL 
Sbjct: 14  RLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTE--QPEPIQALG 71

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQ 274
            +    V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q
Sbjct: 72  TLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGGI-KIIQ 130

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGD 333
           ++ G  + LA++ +G V+S+G  S   LG G Q   +  P+ + +   +GI + +V+AG 
Sbjct: 131 VSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSL--EGIPLAQVAAGG 188

Query: 334 EHVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
            H  AL  +G  Y WG    G L   G    +  + P  + +LK+   + +      T V
Sbjct: 189 SHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAV 248

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDR 449
           L   G V+ FG    G L    RG   K   P++++ ++   VS+I  G YHT+  V   
Sbjct: 249 LTKDGQVFTFGDNSSGQLQNNPRG---KRRGPQLVEGIKG-QVSKIECGSYHTIAYVYTT 304

Query: 450 GRLFGFGDNER 460
           G++   G   R
Sbjct: 305 GQVVSLGHGPR 315



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 131/299 (43%), Gaps = 23/299 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ SN  V+SCG +  G LG         PE  Q +    I+       
Sbjct: 24  LQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALGTLDIDL------ 77

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +       P  ++ L G+   QV+ G 
Sbjct: 78  --VSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGH 135

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+  G V + G N+ GQLG G  +  + +P+ +  LE +  + Q+AAG S+  A+
Sbjct: 136 YHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGI-PLAQVAAGGSHSFAL 194

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +  G  Y +GS S   L    ++  +Q   P +I   +  G  V+ +S G EH   L   
Sbjct: 195 SLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNLG--VIYISCGYEHTAVLTKD 252

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G V+T+G    G L +     +  P+ +  +K  ++   C        +  TG V   G
Sbjct: 253 GQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIKGQVSKIECGSYHTIAYVYTTGQVVSLG 311



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 4/156 (2%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D  QPR +    R G+ +++ ++G+ H + L S+  VY+ G    G LG   E +   PE
Sbjct: 8   DSRQPRRLNG--RDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPE 65

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
           P+ +L +     V   K  +  +   G V+ +G    G LG  +    +  L P  + +L
Sbjct: 66  PIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGE--FKEINLMPMRIKTL 123

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               + Q+S G YH++ +++ G++F +G N + QLG
Sbjct: 124 GGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLG 159


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 132/250 (52%), Gaps = 8/250 (3%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           ++V+ G   + +L   G + +CG N +GQLG      R   + I+ LE   ++V ++ G 
Sbjct: 37  QKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNSRI--EQISSLE-AQTIVDVSCGT 93

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
           ++ +A+   G +YS+G GS   LG G+       P+ I     + I  +++S G+ H VA
Sbjct: 94  NHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKI--IQISCGNFHSVA 151

Query: 339 LDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           L   G V++WG+  CG LG G +I ++  P+ + SLK    VQV A   +TF L  +G+V
Sbjct: 152 LAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTV 211

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           + +G    G LGF +        +P  +DSLR   V+ IS G  HT V+   G ++ FGD
Sbjct: 212 FAWGRNNAGQLGFKNDA-KKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGD 270

Query: 458 NERAQLGHDT 467
           +   QLG  +
Sbjct: 271 DTYGQLGQQS 280



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 163/341 (47%), Gaps = 16/341 (4%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGD 190
           ++  G +  G L    E  + V F   ++      VQ VS  E H+ ++L+ G + +CG 
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N     G +  N    R   + +L+      V+ G N +  +   G++++ G  + GQLG
Sbjct: 61  NPYGQLGRKGNNS---RIEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLG 117

Query: 251 HGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-H 308
            G    +  TPK I  L     ++QI+ G  + +A+  +G V+S+G      LG G Q  
Sbjct: 118 TGKFSSKNFTPKRITGLLN-RKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQII 176

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           ++  P+ +++   KGI +V+V+AG     AL  SG V+ WG+   G LG  ++  K   +
Sbjct: 177 NQATPQLVKSL--KGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFK 234

Query: 369 P--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           P  + SL+      +   +  T VL   G VY FG   +G LG   +   ++   P+ ++
Sbjct: 235 PYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLG---QQSGNQTSVPQKIE 291

Query: 427 SLRAHHVSQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHD 466
              +  VSQ++ G YHT++ V    R+  FG   + Q G+D
Sbjct: 292 EY-SRQVSQVACGRYHTLLYVFTCNRIVSFGKGSQRQQGND 331



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 133/290 (45%), Gaps = 10/290 (3%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +++ G  H+L L+ + ++ SCG +  G LG     ++     +I+   A  +V VS   N
Sbjct: 38  KVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNSR---IEQISSLEAQTIVDVSCGTN 94

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  +   G +++ GD S    G    +   F P+ +  L      Q++ G   +  L  
Sbjct: 95  HSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAE 154

Query: 235 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            G V + G N  GQLG G   +++ TP+ +  L+ +  +VQ+ AG S   A++ +G V++
Sbjct: 155 DGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGI-PLVQVTAGGSQTFALSMSGTVFA 213

Query: 294 FGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +G  +   LG  +  +    +P A+ + R  G  V  +S G+EH   L+  G VYT+G  
Sbjct: 214 WGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLG--VAYISCGEEHTAVLNKDGIVYTFGDD 271

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G LG       ++P+ +      ++   C R      +     +  FG
Sbjct: 272 TYGQLGQQSGNQTSVPQKIEEYSRQVSQVACGRYHTLLYVFTCNRIVSFG 321



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 14/274 (5%)

Query: 106 IVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           I    A   + ++ G  H++ + +  +++S G    G LG G  +++  +  RI      
Sbjct: 78  ISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNR 137

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQ 221
            ++Q+S    H+  + + G+VF+ G N    CG       I     P+LV++LKG+P  Q
Sbjct: 138 KIIQISCGNFHSVALAEDGRVFSWGQNK---CGQLGLGSQIINQATPQLVKSLKGIPLVQ 194

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGP 279
           VTAG + T  L++ G V   G N  GQLG  +   + T  P ++  L ++G V  I+ G 
Sbjct: 195 VTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLG-VAYISCGE 253

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVA 338
            +   +  +G+VY+FG  +   LG    +    P+ I+ + R+   V +V+ G  H ++ 
Sbjct: 254 EHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQ---VSQVACGRYHTLLY 310

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           + +   + ++GKG     G+ +  D+     L S
Sbjct: 311 VFTCNRIVSFGKGSQRQQGNDESSDQAEASQLPS 344


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 162/341 (47%), Gaps = 14/341 (4%)

Query: 109  TSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 167
            +S  +  QI  G+  T +I +N +V +CG    G LG G  +    S T ++      V 
Sbjct: 1018 SSFSSAQQIICGQNCTFVIQANGTVLACGEGSYGRLGQG-NSDDLHSLTIVSALQGFVVT 1076

Query: 168  QVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            Q+  S   + H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q+  
Sbjct: 1077 QLVTSVGSDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQIAC 1135

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            G   +  +T+ G + T G+  +G+LG G   +R TP+ +  LE    +  +A G ++ + 
Sbjct: 1136 GFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENY-HIGHVACGLNHTVC 1194

Query: 285  VTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            V+ +G   ++FG G    LG G    +  P  I+     G+ V +V+ G +  VAL   G
Sbjct: 1195 VSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEAL--SGLKVKKVACGTQFSVALTRDG 1252

Query: 344  YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            +V TWG+                P+ +++L  H   +V      T  L   G+V+G+G  
Sbjct: 1253 FVLTWGQDRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLN 1312

Query: 404  GFGSLGFPDRGVSDKVLRPRILDSL-RAHHVSQISTGLYHT 443
              G LG    G +  V  P++L  L  +  + QIS G  H+
Sbjct: 1313 ADGQLGL---GHTGTVREPQLLGGLGSSEPIKQISAGRTHS 1350



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 147/321 (45%), Gaps = 25/321 (7%)

Query: 155  FTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 213
             T ++  S +   Q+   +N   FV+Q+ G V  CG+ S    G  +++  +    +V A
Sbjct: 1012 LTPLHTSSFSSAQQIICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHSLTIVSA 1069

Query: 214  LKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
            L+G    Q+   +   G    LT  G V + G   +G+LGHG++  +  P+ I  L+   
Sbjct: 1070 LQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-E 1128

Query: 271  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
             V+QIA G  +   VT +G + +FG+G    LG G   +   P  ++    +  H+  V+
Sbjct: 1129 EVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKAL--ENYHIGHVA 1186

Query: 331  AGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
             G  H V + + G   + +G G  G LG G+   K+ P  + +L      +V    + + 
Sbjct: 1187 CGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSV 1246

Query: 390  VLVDTGSVYGFGWMGFGSLGFPDR--GVSDKVLR----PRILDSLRAHHVSQISTGLYHT 443
             L   G V  +G          DR  G ++  +R    P+ + +L  H + ++  G  HT
Sbjct: 1247 ALTRDGFVLTWG---------QDRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHT 1297

Query: 444  VVVTDRGRLFGFGDNERAQLG 464
            + +T  G ++G+G N   QLG
Sbjct: 1298 LALTSDGNVWGWGLNADGQLG 1318



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 8/159 (5%)

Query: 328  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR--- 384
            ++  G      + ++G V   G+G  G LG G+  D      +S+L+  +  Q+      
Sbjct: 1025 QIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGS 1084

Query: 385  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               +  L ++G V+ +G   +G LG    G SD+  RPR +++L+   V QI+ G  H+ 
Sbjct: 1085 DGHSLALTESGEVFSWGDGDYGKLG---HGNSDRQRRPRQIEALQGEEVIQIACGFKHSA 1141

Query: 445  VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
            VVT  G+L  FG+ +  +LG  T+  C   T   ++ +E
Sbjct: 1142 VVTVDGKLLTFGNGDYGRLGLGTV--CNRKTPERVKALE 1178



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 9/147 (6%)

Query: 346  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
            Y WG G  G L    E  +++  PL +     A Q+   +  TFV+   G+V   G   +
Sbjct: 994  YLWGGGRHGQLC---EAGRSVLTPLHTSSFSSAQQIICGQNCTFVIQANGTVLACGEGSY 1050

Query: 406  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERAQ 462
            G LG   +G SD +    I+ +L+   V+Q+ T +    H++ +T+ G +F +GD +  +
Sbjct: 1051 GRLG---QGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGK 1107

Query: 463  LGHDTLRGCLEPTEIFIQEMEEDTGLA 489
            LGH        P +I   + EE   +A
Sbjct: 1108 LGHGNSDRQRRPRQIEALQGEEVIQIA 1134



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 14/178 (7%)

Query: 117  ITTGRYHTLLIS--NSSVFSCGSSLCGVLGHGPETTQCV-----SFTRINFPSAAHVVQV 169
            +  G  HT+ +S   S+ ++ G    G LG G  + +       + + +     A   Q 
Sbjct: 1185 VACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQF 1244

Query: 170  SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
            S +     FVL  GQ    G   +   GH         P+ V  L G   ++V  G   T
Sbjct: 1245 SVALTRDGFVLTWGQDRLIGQTEAQMRGH-------CTPQKVTTLAGHFIEEVVVGSEHT 1297

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
              LT  G+V   G N  GQLG G T     P+ +  L     + QI+AG ++  A +G
Sbjct: 1298 LALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLGGLGSSEPIKQISAGRTHSAAWSG 1355


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  123 bits (308), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 88/309 (28%), Positives = 146/309 (47%), Gaps = 15/309 (4%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAG 225
            V V+    H A +   G++FT G+NS    GH  +  +    PR VE  K  P   ++ G
Sbjct: 1035 VSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCG 1094

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
               +  +     +++ GS+ +GQLGHG    +  PK I        V+ IA G ++ + +
Sbjct: 1095 GEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154

Query: 286  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSS 342
              +G +++FG   +  LG G   +   P  I+T    GIH   +  ++AG  H +    +
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDN 1214

Query: 343  GYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G +Y+WG    G LGHG+ I+K+L P+ +  LK    +++      T  + +  SVY +G
Sbjct: 1215 GDIYSWGANSKGQLGHGN-IEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYCWG 1273

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT------DRGRLFGF 455
                  LG    G +   L P++++      + ++  GLYHT  VT      DRG ++  
Sbjct: 1274 QGEHMCLG---NGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYIC 1330

Query: 456  GDNERAQLG 464
            G  E  +LG
Sbjct: 1331 GGGEHGKLG 1339



 Score =  117 bits (293), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 105/388 (27%), Positives = 171/388 (44%), Gaps = 30/388 (7%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
            + +  G  H  +IS +  +F+ G++  G LGHG    +  S  R +    ++ ++ +S  
Sbjct: 1035 VSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCG 1094

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGF 231
              H+  V QS Q+++ G +     GH     P   P+ +E   G      +  G   T  
Sbjct: 1095 GEHSVAVDQSFQIYSWGSSRYGQLGH-GVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMV 1153

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG----SVVQIAAGPSYMLAVTG 287
            L   G + T G N  GQLG G+  +R  P  I   E VG     +  IAAG S+ +    
Sbjct: 1154 LKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLD 1213

Query: 288  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            NG +YS+G+ S   LGHG     L+P+ I     KG  ++++S G  H VA+     VY 
Sbjct: 1214 NGDIYSWGANSKGQLGHGNIEKSLRPKQIDEL--KGKPIIKISCGHFHTVAISELNSVYC 1271

Query: 348  WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLV-----DTGSVYGFG 401
            WG+G    LG+G   ++  P+ +   +   +   VC       V       D G+VY  G
Sbjct: 1272 WGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICG 1331

Query: 402  WMGFGSLG--------FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
                G LG        F D+        P ++ SL + ++   S+G   + ++T+ G L+
Sbjct: 1332 GGEHGKLGTGGDLKTPFFDKP------HPAVIPSLNSMNIVGFSSGSEFSAIITNNGALY 1385

Query: 454  GFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             +G     Q+G+        PT+I + +
Sbjct: 1386 TWGYGNFGQIGNGKTEDMWLPTKISLND 1413



 Score =  110 bits (276), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 70/232 (30%), Positives = 114/232 (49%), Gaps = 14/232 (6%)

Query: 253  DTLDRPTPKSIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 311
            D L  P P    PL +     V +A G  ++  ++ +G ++++G+ S   LGHG    + 
Sbjct: 1018 DLLLNPMP----PLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKY 1073

Query: 312  Q--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
            Q  PR ++TF+   I  + +S G EH VA+D S  +Y+WG    G LGHG    + LP+ 
Sbjct: 1074 QSTPRRVETFKSSPI--IMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKK 1131

Query: 370  LSSLKSHLAVQVCARK-RKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRIL 425
            +        V   A     T VL  +G ++ FGW   G LG   F +R V  ++    I+
Sbjct: 1132 IEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIV 1191

Query: 426  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
              +    ++ I+ G  H+++  D G ++ +G N + QLGH  +   L P +I
Sbjct: 1192 -GIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQI 1242



 Score =  105 bits (263), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 132/272 (48%), Gaps = 14/272 (5%)

Query: 222  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAGP 279
            V  G      ++  G + T G+N+ GQLGHG  + +   TP+ +   +    ++ I+ G 
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKS-SPIIMISCGG 1095

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             + +AV  +  +YS+GS     LGHG    +  P+ I+ F   G  V+ ++ G  H + L
Sbjct: 1096 EHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFT-GGQKVLAIATGYAHTMVL 1154

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-----LKSHLAVQVCARKRKTFVLVDT 394
              SG ++T+G    G LG G+  ++ +P  + +     +       + A    + + +D 
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDN 1214

Query: 395  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
            G +Y +G    G LG    G  +K LRP+ +D L+   + +IS G +HTV +++   ++ 
Sbjct: 1215 GDIYSWGANSKGQLG---HGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSVYC 1271

Query: 455  FGDNERAQLGHDTLRGCLEPT--EIFIQEMEE 484
            +G  E   LG+ + +  L P   E FI +  E
Sbjct: 1272 WGQGEHMCLGNGSNKNELSPKMIEFFINKKIE 1303



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 22/283 (7%)

Query: 107  VETSAGNQ--MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF----TRIN 159
            +E   G Q  + I TG  HT+++  S  +F+ G +  G LG G    + V      + I 
Sbjct: 1132 IEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIV 1191

Query: 160  FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
                  +  ++A  +H+   L +G +++ G NS    GH +  + + RP+ ++ LKG P 
Sbjct: 1192 GIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSL-RPKQIDELKGKPI 1250

Query: 220  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
             +++ G   T  ++    V+  G   H  LG+G   +  +PK I        + ++  G 
Sbjct: 1251 IKISCGHFHTVAISELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFIN-KKIEKVVCGL 1309

Query: 280  SYMLAVTG------NGVVYSFGSGSNFCLGHGEQ-----HDELQPRAIQTFRRKGIHVVR 328
             +   VT        G VY  G G +  LG G        D+  P  I +     +++V 
Sbjct: 1310 YHTATVTAAENGSDRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSL--NSMNIVG 1367

Query: 329  VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
             S+G E    + ++G +YTWG G  G +G+G   D  LP  +S
Sbjct: 1368 FSSGSEFSAIITNNGALYTWGYGNFGQIGNGKTEDMWLPTKIS 1410


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 130  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4224 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4282

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4283 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4341

Query: 248  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4342 KLGHGNRVSYDRPKLVEHLHGM-SVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDS 4400

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4401 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4460

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4461 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4517

Query: 428  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4518 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4564



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4314 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRVSYDRPKLVEHLHGMSVADIACG 4371

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T  G V T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4372 SAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4431

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4432 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4489

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4490 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4549

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4550 EGQLG---DGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALS 4589



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 159/342 (46%), Gaps = 25/342 (7%)

Query: 115  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV------- 166
            + I  G     ++S    VF+CG    G LG G      V++  +  P    V       
Sbjct: 3110 IHIAGGSKSLFIVSQEGRVFACGEGTNGRLGLG------VTYN-VPLPHQLPVLHQYVVK 3162

Query: 167  -VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
             V V +   HA  +   G+VF+ G+      GH +    + +PR VEAL+    + V  G
Sbjct: 3163 KVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT-LDKPRQVEALRAKKIRDVACG 3221

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYML 283
             + +  ++ +G ++T G   +G+LGHGD   +  PK +A L     VVQ+A G   +  L
Sbjct: 3222 SSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGR-RVVQVACGSRDAQTL 3280

Query: 284  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            A+T +G V+S+G G    LG G       P  I+  R  GI V+++  G +  +AL  +G
Sbjct: 3281 ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAG 3338

Query: 344  YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
             V+TWGKG    LGHG +     P+P+  L+    + V         + D+G VY +G  
Sbjct: 3339 EVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDN 3398

Query: 404  GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
              G  G  +  V+ K   P ++  L    V++++ G  H++ 
Sbjct: 3399 DHGQQGSGNTFVNKK---PALVIGLDDVFVNRVACGSSHSIA 3437



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 140/294 (47%), Gaps = 17/294 (5%)

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 234
             V Q G+VF CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 3121 IVSQEGRVFACGEGTNGRLGLGVTYNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 3178

Query: 235  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
             G V + G    G+LGHG+  TLD+P  + +  L     +  +A G S+  A++  G +Y
Sbjct: 3179 DGKVFSWGEGEDGKLGHGNRTTLDKP--RQVEALR-AKKIRDVACGSSHSAAISSQGELY 3235

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 350
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 3236 TWGLGEYGRLGHGDNATQLKPKLVAAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3293

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG 
Sbjct: 3294 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3352

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3353 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3404



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 128/285 (44%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQ 168
             ++ + +G  H L L +   V++ G    G LGHG      VS+ R       H   V  
Sbjct: 4312 KKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----VSYDRPKLVEHLHGMSVAD 4367

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +  SGQV T G       GH D+   + RP+LVEAL G     +  G   
Sbjct: 4368 IACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGD 4426

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T
Sbjct: 4427 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALT 4485

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VY
Sbjct: 4486 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVY 4543

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  +S+L+    V+V      T  L
Sbjct: 4544 TWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLAL 4588



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 23/304 (7%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            V QV  SEN    + Q G++                ++P   P+ +E         +  
Sbjct: 588 QVKQVVCSENQVLLLSQEGKLHAW-----------RLSKPEAEPQPLEEAGHETFISIAG 636

Query: 225 GLNFTGFLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
                 F+ I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G +Y 
Sbjct: 637 HCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVFCGCTYS 695

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
             +T  G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S 
Sbjct: 696 AVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSE 755

Query: 343 GYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
           G V+ WG G  G LG+G+    +   L E L  ++     ++ A  + +  L   G VY 
Sbjct: 756 GLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RIFAGSQYSVALSSEGQVYT 810

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +G          +R V    + PR++ SL+   +  ++ G+ H + ++  G +FG+G N+
Sbjct: 811 WGKATCLGHQLVERSVQGCSV-PRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRND 869

Query: 460 RAQL 463
             Q+
Sbjct: 870 CQQV 873



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 281
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4217 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4268

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4269 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4328

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4329 EGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWG 4388

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4389 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4445

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LG     GC  P +I
Sbjct: 4446 YGKLGRGGSDGCKLPYKI 4463



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+  G V++ 
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQEGRVFAC 3131

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G+N  LG G  ++   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3132 GEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3191

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3192 KLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3251

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3252 TQ---LKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3308

Query: 473  EPTEI 477
             P EI
Sbjct: 3309 TPHEI 3313



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 5/142 (3%)

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      + V+   
Sbjct: 642 HFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCG 701

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 452
           G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  G +
Sbjct: 702 GNLLTWGRGTYARLG---HGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLV 758

Query: 453 FGFGDNERAQLGHDTLRGCLEP 474
           F +GD +  +LG+    G L+P
Sbjct: 759 FAWGDGDYGKLGNGNCNGSLQP 780


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 134/274 (48%), Gaps = 6/274 (2%)

Query: 200 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 259
           +TNRP    R      G   +Q  +G   +  L   G +H+ G N+HGQLG  D   +  
Sbjct: 6   NTNRPGPLRRRPAGRGGAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQ 65

Query: 260 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQT 318
           PK I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE ++  L PR I+T
Sbjct: 66  PKRIPALETL-RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKT 124

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHL 377
                I +++VS G  H +AL   G ++TWG    G LG G E   +  P+ +  L    
Sbjct: 125 L--TDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIP 182

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQI 436
             QV A    +F L  +G+ +G+G    G L    + V   +  +P  +D+L    V  I
Sbjct: 183 LTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYI 242

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
           S G  HT V+T  G++F FG N   QLG+    G
Sbjct: 243 SCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAG 276



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 152/301 (50%), Gaps = 17/301 (5%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A + Q ++ E H+  +L +G++ + GDNS    G RD  R   +P+ + AL+ +    V+
Sbjct: 23  AELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQE-QPKRIPALETLRVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +    P+ I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDI-KIIQVSCGHHHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +G ++++GS S+  LG G++   +  P+ +Q     GI + +V+AG  H  AL  
Sbjct: 141 LALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFL--DGIPLTQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGALGHGDE----IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           SG  + WG    G L    +    +  + P  + +L++   V +      T VL  TG V
Sbjct: 199 SGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQTGKV 258

Query: 398 YGFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           + FG   +G LG+ P  G       P++++ +    VSQI  G YHT+  V   G++  F
Sbjct: 259 FTFGGNSYGQLGYSPTAGKEG----PQLVEGIDG-LVSQIDCGSYHTLAYVYTTGKVVSF 313

Query: 456 G 456
           G
Sbjct: 314 G 314



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 133/292 (45%), Gaps = 10/292 (3%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q  +G  H+LL+ SN  + S G +  G LG      Q     RI       V  VS  + 
Sbjct: 27  QAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQ-EQPKRIPALETLRVDLVSCGKE 85

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  V   G+VF  G  S    G  + N     PR ++ L  +   QV+ G + +  L+ 
Sbjct: 86  HSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSE 145

Query: 235 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            G + T GSN+HGQLG G +   + +P+ +  L+ +  + Q+AAG ++  A++ +G  + 
Sbjct: 146 DGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGI-PLTQVAAGGAHSFALSLSGASFG 204

Query: 294 FGSGSNFCLGHGEQHDEL----QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
           +GS S   L   +++  +    +P ++      G  VV +S G EH   L  +G V+T+G
Sbjct: 205 WGSNSEGQLALRKKNVPVVQSSKPCSVDALENLG--VVYISCGYEHTAVLTQTGKVFTFG 262

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
               G LG+     K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 263 GNSYGQLGYSPTAGKEGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 314


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
          Length = 1108

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 159/351 (45%), Gaps = 22/351 (6%)

Query: 147 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 206
           P TT  +    +       V Q+++   H A V + G+VFT G+ S    GH   ++   
Sbjct: 247 PSTTDVLVPKPLESSVVLDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGH-GIDKDFG 305

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI- 263
           RP+LVE L     + V  G N T  ++I   + + G   +  G LGHG  +    PK I 
Sbjct: 306 RPQLVEFLAVTNVESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRIN 365

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            PLE +  V+ IA G  +    T NG +++FG G+   LGHG +     P+ +Q     G
Sbjct: 366 GPLEGL-QVISIACGTWHSALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLL--SG 422

Query: 324 IHVVRVSAGDEHVVALD----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
           +  + V+ G  H  A+           SS  ++TWG G    LGHG++     P  +S+L
Sbjct: 423 LKTITVACGVWHTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTL 482

Query: 374 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             +   Q+      T  L  +G ++  G   FG LG     +SD  +   + D+L    V
Sbjct: 483 IEYNFHQIACGHTMTIALTTSGHLFTMGGTEFGQLG---NSLSDGKIPILVQDALVGEFV 539

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
            +IS G +H   +T R  L+ +G     +LGH  +     PT   ++ ++E
Sbjct: 540 EEISCGAHHVAALTSRSELYTWGKGANGRLGHGDIDDRKSPT--LVEALKE 588



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 152/375 (40%), Gaps = 34/375 (9%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSA 171
           QI +G  H  L++    VF+ G    G LGHG +      F R   + F +  +V  V+ 
Sbjct: 268 QIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDK----DFGRPQLVEFLAVTNVESVAC 323

Query: 172 SENHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
            ENH   V  S ++F+ GD        GH          R+   L+G+    +  G   +
Sbjct: 324 GENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACGTWHS 383

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---- 285
              T  G + T G  T G LGHG+      PK +  L  + ++  +A G  +  A+    
Sbjct: 384 ALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTIT-VACGVWHTAAIVEVT 442

Query: 286 --TGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             +G+ V    ++++G G  + LGHG +   LQP  + T      H  +++ G    +AL
Sbjct: 443 FQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFH--QIACGHTMTIAL 500

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
            +SG+++T G    G LG+     K       +L      ++         L     +Y 
Sbjct: 501 TTSGHLFTMGGTEFGQLGNSLSDGKIPILVQDALVGEFVEEISCGAHHVAALTSRSELYT 560

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +G    G LG    G  D    P ++++L+  HV  IS G   T  +     + G     
Sbjct: 561 WGKGANGRLG---HGDIDDRKSPTLVEALKERHVKNISCGSSFTSCICIHKWVSG----- 612

Query: 460 RAQLGHDTLRGCLEP 474
              +   T  GC +P
Sbjct: 613 ---VDQSTCTGCRQP 624



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 126/276 (45%), Gaps = 19/276 (6%)

Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQ 168
           N   +  G  HT  +S S  +FS G      G+LGHG + +  V   RIN P     V+ 
Sbjct: 317 NVESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVP-KRINGPLEGLQVIS 375

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           ++    H+A    +G++FT GD +    GH +    +  P+ V+ L G+    V  G+  
Sbjct: 376 IACGTWHSALATSNGKLFTFGDGTFGVLGHGN-RESVAYPKEVQLLSGLKTITVACGVWH 434

Query: 229 TGFL---TIRG-------HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
           T  +   T +         + T G     +LGHG+      P  ++ L E  +  QIA G
Sbjct: 435 TAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEY-NFHQIACG 493

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +  +A+T +G +++ G G+ F        D   P  +Q     G  V  +S G  HV A
Sbjct: 494 HTMTIALTTSGHLFTMG-GTEFGQLGNSLSDGKIPILVQDAL-VGEFVEEISCGAHHVAA 551

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           L S   +YTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 552 LTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALK 587



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 18/230 (7%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + I  G +H+ L  SN  +F+ G    GVLGHG    + V++ + +   S    + V+  
Sbjct: 374 ISIACGTWHSALATSNGKLFTFGDGTFGVLGHG--NRESVAYPKEVQLLSGLKTITVACG 431

Query: 173 ENHAAFVL----QSG------QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             H A ++    QSG      ++FT GD   +  GH +      +P  V  L      Q+
Sbjct: 432 VWHTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGN-KETYLQPTCVSTLIEYNFHQI 490

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G   T  LT  GH+ T G    GQLG+  + D   P  +        V +I+ G  ++
Sbjct: 491 ACGHTMTIALTTSGHLFTMGGTEFGQLGNSLS-DGKIPILVQDALVGEFVEEISCGAHHV 549

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            A+T    +Y++G G+N  LGHG+  D   P  ++  + +  HV  +S G
Sbjct: 550 AALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKER--HVKNISCG 597



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 85/206 (41%), Gaps = 18/206 (8%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  Y+        V   G+G+ F        D L P+ +++     +H  ++++G  H+ 
Sbjct: 224 GDVYIWGEVWADAVAPDGNGTQF----PSTTDVLVPKPLESSVVLDVH--QIASGVRHMA 277

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-----VCARKRKTFVLV 392
            +   G V+TWG+   G LGHG  IDK    P   L   LAV       C       V +
Sbjct: 278 LVTRQGEVFTWGEESGGRLGHG--IDKDFGRP--QLVEFLAVTNVESVACGENHTCAVSI 333

Query: 393 -DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
            D    +G G    G LG     VS  V + RI   L    V  I+ G +H+ + T  G+
Sbjct: 334 SDELFSWGDGKYNVGLLGH-GTDVSHWVPK-RINGPLEGLQVISIACGTWHSALATSNGK 391

Query: 452 LFGFGDNERAQLGHDTLRGCLEPTEI 477
           LF FGD     LGH        P E+
Sbjct: 392 LFTFGDGTFGVLGHGNRESVAYPKEV 417



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 24/200 (12%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLI-----------SNSSVFSCGSSLCGVLGHG 146
           +SV +  ++   S    + +  G +HT  I           S+  +F+ G      LGHG
Sbjct: 409 ESVAYPKEVQLLSGLKTITVACGVWHTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHG 468

Query: 147 PETT----QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 202
            + T     CVS T I +    +  Q++        +  SG +FT G       G+  ++
Sbjct: 469 NKETYLQPTCVS-TLIEY----NFHQIACGHTMTIALTTSGHLFTMGGTEFGQLGNSLSD 523

Query: 203 RPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
             I  P LV+ AL G   ++++ G +    LT R  ++T G   +G+LGHGD  DR +P 
Sbjct: 524 GKI--PILVQDALVGEFVEEISCGAHHVAALTSRSELYTWGKGANGRLGHGDIDDRKSPT 581

Query: 262 SIAPLEEVGSVVQIAAGPSY 281
            +  L+E   V  I+ G S+
Sbjct: 582 LVEALKER-HVKNISCGSSF 600


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 164/359 (45%), Gaps = 8/359 (2%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           ++GR +     + +++  G +  G LG G E  +    T     +    VQ+   E    
Sbjct: 8   SSGRENLYFQGSGTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLF 66

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIR 235
            V   G+++  G  +    G   T   +  P L+E+++ V  K+V   +G      L+  
Sbjct: 67  AVTADGKLYATGYGAGGRLGIGGTE-SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V++ G    G+LGHG+      P+ I  L  +  VV +AAG ++   VT  G +Y++G
Sbjct: 126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGI-EVVDVAAGGAHSACVTAAGDLYTWG 184

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G    LGH +  D+L+P+ ++  +   +  +   +GD   + L     V++WG G  G 
Sbjct: 185 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 244

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G      +P  + SL     V+V    + +  L  +G+VY +G   +  LG    G 
Sbjct: 245 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH---GS 301

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            D V RPR +  L+   V  I+TG  H V  T+ G ++ +GDN+  QLG  T      P
Sbjct: 302 DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP 360



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 168

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 169 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH-RVVDIACGSGDAQTLC 227

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 228 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 285

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 345

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 346 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 383



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 16/257 (6%)

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 282
           L F G  TI G  H    N  GQLG   G  +  PTP +++A L  V    Q+  G   +
Sbjct: 14  LYFQGSGTIYGWGH----NHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTL 65

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            AVT +G +Y+ G G+   LG G       P  +++ +   I  V V++G +H +AL S 
Sbjct: 66  FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G VY+WG+   G LGHG+      P  + SL+    V V A    +  +   G +Y +G 
Sbjct: 126 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGK 185

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNER 460
             +G LG  D   S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD + 
Sbjct: 186 GRYGRLGHSD---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 242

Query: 461 AQLGHDTLRGCLEPTEI 477
            +LG     GC  P +I
Sbjct: 243 GKLGRGGSDGCKVPMKI 259



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 114/285 (40%), Gaps = 60/285 (21%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
            ++ + +G  H L L S   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 108 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 166

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--------------- 216
              H+A V  +G ++T G       GH D+   + +P+LVEAL+G               
Sbjct: 167 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 225

Query: 217 -----------------------------VPCK----------QVTAGLNFTGFLTIRGH 237
                                        VP K          +V  G  F+  LT  G 
Sbjct: 226 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 285

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V+T G   + +LGHG       P+ +  L+    V+ IA G  + +  T +G VY++G  
Sbjct: 286 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK-KVIAIATGSLHCVCCTEDGEVYTWGDN 344

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
               LG G  +   +PR +   + K ++  RV+ G  H +A  +S
Sbjct: 345 DEGQLGDGTTNAIQRPRLVAALQGKKVN--RVACGSAHTLAWSTS 387


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 129/261 (49%), Gaps = 6/261 (2%)

Query: 208 PRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           PR  +A   G   +Q  +G   +  L   G +H+CG N+ GQLG         PK I  L
Sbjct: 13  PRRRQAGXAGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTL 72

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIH 325
           + +  V  ++ G  + LAV   G V+++G+GS   LG GE +   L P  I+T    GI 
Sbjct: 73  DNL-RVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTL--TGIK 129

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 384
           +++VS G  H +AL   G V++WG    G LG G E   +  P+ + SL      QV A 
Sbjct: 130 IIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAG 189

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              +F L  +G+ +G+G    G L      V  +  +PR + +L+   V  IS G  HT 
Sbjct: 190 GAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTA 249

Query: 445 VVTDRGRLFGFGDNERAQLGH 465
           V+T  G++F FG N   QLGH
Sbjct: 250 VLTQTGKVFTFGGNSYGQLGH 270



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 145/301 (48%), Gaps = 14/301 (4%)

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
           + A + Q ++ E H+  +L +G++ +CGDNS    G +   R    P+ +  L  +    
Sbjct: 21  AGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDE-HPKRIRTLDNLRVDL 79

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPS 280
           V+ G   +  +  +G V   G+ + GQLG G+  +    P  I  L  +  ++Q++ G  
Sbjct: 80  VSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGI-KIIQVSCGHY 138

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           + LA++  G V+S+GS S+  LG G++   +  P+ +++    GI + +V+AG  H  AL
Sbjct: 139 HSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSL--DGIPLTQVAAGGAHSFAL 196

Query: 340 DSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
             SG  + WG    G L    +   +    P  + +LK+   + +      T VL  TG 
Sbjct: 197 SLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGK 256

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           V+ FG   +G LG       +    P++++ +    VSQI  G YHT+  V   G++  F
Sbjct: 257 VFTFGGNSYGQLGHSPTAEKEG---PQLVEGIDG-LVSQIDCGSYHTLAYVYTTGKVVSF 312

Query: 456 G 456
           G
Sbjct: 313 G 313



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 141/304 (46%), Gaps = 24/304 (7%)

Query: 111 AGNQM-QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFP 161
           AG ++ Q  +G  H+LL+ SN  + SCG +  G LG         P+  + +   R++  
Sbjct: 21  AGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDL- 79

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
                  VS  + H+  V   G+VF  G  S    G  +       P  ++ L G+   Q
Sbjct: 80  -------VSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQ 132

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           V+ G   +  L+  G V + GSN+HGQLG G +   + +P+ +  L+ +  + Q+AAG +
Sbjct: 133 VSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGI-PLTQVAAGGA 191

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVV 337
           +  A++ +G  + +GS +   L   + +  +Q   PR+I   +  G  V+ +S G EH  
Sbjct: 192 HSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLG--VIYISCGYEHTA 249

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            L  +G V+T+G    G LGH    +K  P+ +  +   ++   C        +  TG V
Sbjct: 250 VLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKV 309

Query: 398 YGFG 401
             FG
Sbjct: 310 VSFG 313



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 6/187 (3%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q++ G YH+L +S    VFS GS+  G LG G E     S  R+       + QV+A  
Sbjct: 131 IQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGG 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 231
            H+  +  SG  F  G N++     R  N P+   +PR + ALK +    ++ G   T  
Sbjct: 191 AHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAV 250

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA-VTGNGV 290
           LT  G V T G N++GQLGH  T ++  P+ +  ++  G V QI  G  + LA V   G 
Sbjct: 251 LTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGID--GLVSQIDCGSYHTLAYVYTTGK 308

Query: 291 VYSFGSG 297
           V SFG G
Sbjct: 309 VVSFGRG 315


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 116/225 (51%), Gaps = 6/225 (2%)

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
            G N +GQLG G T D   P+ I   E + S+  +AAG  +  AVT +G ++ +G G   
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGI-SIKMVAAGAEHTAAVTEDGELFGWGWGRYG 59

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LG G+++D L P+ + +    G  +V V+ G  H +++ S G +YT+G    G LGHGD
Sbjct: 60  NLGLGDRNDRLVPQKVSSV--DGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGD 117

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
             D+ +P  L +L+     Q+    R T  L   G +YG+GW  FG +G  D   +    
Sbjct: 118 FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD---NIDHC 174

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            P  +   +   V QIS G  HT+ VTD+  +F +G     QLGH
Sbjct: 175 SPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGH 219



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 5/239 (2%)

Query: 135 CGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
            G +  G LG G  T   +   +I       +  V+A   H A V + G++F  G     
Sbjct: 1   WGRNQNGQLGLG-TTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYG 59

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
             G  D N  +  P+ V ++ G     V  G   T  ++  G ++T G + +GQLGHGD 
Sbjct: 60  NLGLGDRNDRLV-PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF 118

Query: 255 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 314
            DR  P  +  L    ++ QI+ G  + +A+T +G +Y +G      +G G+  D   P 
Sbjct: 119 EDRLVPHRLEALRG-DNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSP- 176

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
            IQ    +   V+++S G  H +A+     V++WG+G  G LGHG+ +D+  P  L +L
Sbjct: 177 -IQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEAL 234



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 98/213 (46%), Gaps = 14/213 (6%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT  ++ +  +F  G    G LG G    + V   +++      +V V+    H
Sbjct: 34  VAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVP-QKVSSVDGDKMVMVACGWRH 92

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGF 231
              V   G ++T G +     GH D     F  RLV    EAL+G    Q++ G   T  
Sbjct: 93  TISVSSLGGLYTYGWSKYGQLGHGD-----FEDRLVPHRLEALRGDNISQISGGWRHTMA 147

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV 290
           LT  G ++  G N  GQ+G GD +D  +P  I  P ++   V+QI+ G  + LAVT    
Sbjct: 148 LTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQ--KVIQISCGWRHTLAVTDKQN 205

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           V+S+G G+N  LGHGE  D   P  ++     G
Sbjct: 206 VFSWGRGTNGQLGHGESVDRNTPMILEALSVDG 238



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 3/127 (2%)

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG+   G LG G   D  +P+ + + +      V A    T  + + G ++G+GW  +G+
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  DR  +D+++ P+ + S+    +  ++ G  HT+ V+  G L+ +G ++  QLGH  
Sbjct: 61  LGLGDR--NDRLV-PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGD 117

Query: 468 LRGCLEP 474
               L P
Sbjct: 118 FEDRLVP 124


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 142/301 (47%), Gaps = 21/301 (6%)

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--G 247
           D  +  CG R       + +L++AL  +  + V  G   T  +T+ G ++T G  T   G
Sbjct: 208 DVQNISCGGRHAALVTKQAKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFG 267

Query: 248 QLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            LGHG+ +    PK +  PLE +  V  I+ GP +   VT  G +++FG GS   LGHG+
Sbjct: 268 LLGHGNDVSHWVPKHVNGPLEGI-HVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGD 326

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------DSSGYVYTWGKGYCG 354
           +     PR +++   KG+  VR + G  H  A+             SSG ++TWG G  G
Sbjct: 327 RESISVPREVESL--KGLRTVRAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKG 384

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LGHGD+  K +P  +++L      QV      T  L  +G VY  G   +G LG     
Sbjct: 385 RLGHGDKEPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLG---NA 441

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +D +L  R+   L  + V +IS G YH  V+T R  ++ +G     +LGH        P
Sbjct: 442 QADGMLPVRVEGKLYKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTP 501

Query: 475 T 475
           T
Sbjct: 502 T 502



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 128/274 (46%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LGHG + +  V    +N P    HV  +S  
Sbjct: 240 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP-KHVNGPLEGIHVSSISCG 298

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD S    GH D    I  PR VE+LKG+   +   G+  T  +
Sbjct: 299 PWHTALVTSAGQLFTFGDGSFGVLGHGD-RESISVPREVESLKGLRTVRAACGVWHTAAV 357

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G    G+LGHGD   +  P  +A L E  +  Q+A G  
Sbjct: 358 VEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEP-NFCQVACGHC 416

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
             +A+T +G VY+ GS     LG+  Q D + P  ++    K   V  +S G  HV  L 
Sbjct: 417 LTVALTTSGHVYTMGSAVYGQLGNA-QADGMLPVRVEGKLYKNF-VEEISCGAYHVAVLT 474

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  DK  P  + +LK
Sbjct: 475 SRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALK 508



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 18/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I+ G +HT L++++  +F+ G    GVLGHG    + +S  R +        V+ +    
Sbjct: 295 ISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDR--ESISVPREVESLKGLRTVRAACGVW 352

Query: 175 HAAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H A V++            SG++FT GD      GH D   P   P  V AL      QV
Sbjct: 353 HTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGD-KEPKLVPTCVAALVEPNFCQV 411

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G   T  LT  GHV+T GS  +GQLG+    D   P  +        V +I+ G  ++
Sbjct: 412 ACGHCLTVALTTSGHVYTMGSAVYGQLGNAQA-DGMLPVRVEGKLYKNFVEEISCGAYHV 470

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T    VY++G G+N  LGHG+  D+  P  ++  + K +  V
Sbjct: 471 AVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNV 515



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 5/106 (4%)

Query: 375 SHLAVQVCA-RKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SH+ +++ A  +  T  +  +G +Y  G G   FG LG  +  VS  V +  +   L   
Sbjct: 233 SHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPK-HVNGPLEGI 290

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           HVS IS G +HT +VT  G+LF FGD     LGH        P E+
Sbjct: 291 HVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREV 336



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 11/131 (8%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVV 167
           N  Q+  G   T+ ++ S  V++ GS++ G LG+    G    +       NF     V 
Sbjct: 407 NFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKNF-----VE 461

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           ++S    H A +    +V+T G  ++   GH DT      P LVEALK    + V  G+N
Sbjct: 462 EISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDK-NTPTLVEALKDKQVRNVVCGIN 520

Query: 228 FTGFLTIRGHV 238
           FT  + I   V
Sbjct: 521 FTAAICIHKWV 531


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 151/312 (48%), Gaps = 22/312 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++  E HAA + + G+V++ G+ SS   G++  N  + RP++V++L  +  K V  G
Sbjct: 266 VQSIACGETHAAIITKQGEVYSWGNESSGRIGNQ-VNIKVSRPKVVQSLASLHVKDVAYG 324

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYM 282
              T  +T+ G +   G   +  +G  D+  R      K  +PL+ + SVV+IA GP + 
Sbjct: 325 SKHTCAVTVSGELIEWGEGPY--MGQLDSYARNQWFPHKLFSPLDGI-SVVKIACGPWHT 381

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             +T +G +Y++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+   
Sbjct: 382 AIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESL--KGSRVKCVACGPWHTAAIVEV 439

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                       ++TWG    G LGH D+  K +P  + SL  +  +QV      T  L 
Sbjct: 440 ISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGTALTVALS 499

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            TG V+  G    G LG P    +D      +   L++  V  IS+G  H  VVT  G++
Sbjct: 500 VTGVVFTSGSSMHGQLGNPH---ADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKV 556

Query: 453 FGFGDNERAQLG 464
           F +G  +  QLG
Sbjct: 557 FTWGKGKEGQLG 568



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 135/293 (46%), Gaps = 34/293 (11%)

Query: 112 GNQMQITTGR---------YHTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSFTRIN 159
           GNQ+ I   R          H   ++  S  +C  ++ G L   G GP   Q  S+ R  
Sbjct: 297 GNQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYARNQ 356

Query: 160 -FP-------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            FP           VV+++    H A +  SGQ++T GD +    GH DT +   RP+ V
Sbjct: 357 WFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDT-QGTTRPKEV 415

Query: 212 EALKGVPCKQVTAGLNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           E+LKG   K V  G   T  +          + R  + T G    G+LGH D   +  P 
Sbjct: 416 ESLKGSRVKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPT 475

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
            +  L +    +Q++ G +  +A++  GVV++ GS  +  LG+    D     A++    
Sbjct: 476 CVDSLTDY-DFIQVSCGTALTVALSVTGVVFTSGSSMHGQLGN-PHADGKTVSAVEGLL- 532

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           K   V  +S+G  HV  + ++G V+TWGKG  G LG GD ++++ P  + +L+
Sbjct: 533 KSEFVRHISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRSTPTLVDALE 585



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 23/294 (7%)

Query: 185 VFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           VF  GD   S   CG  DT++P+  P LV++   +  + +  G      +T +G V++ G
Sbjct: 234 VFFWGDAFGSILECG--DTSKPL--PMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWG 289

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
           + + G++G+   +    PK +  L  +  V  +A G  +  AVT +G +  +G G    +
Sbjct: 290 NESSGRIGNQVNIKVSRPKVVQSLASL-HVKDVAYGSKHTCAVTVSGELIEWGEGPY--M 346

Query: 303 GHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           G  + +   Q    + F    GI VV+++ G  H   + SSG +YT+G G  G LGHGD 
Sbjct: 347 GQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDT 406

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS----------VYGFGWMGFGSLGFP 411
              T P+ + SLK      V      T  +V+  S          ++ +G    G LG  
Sbjct: 407 QGTTRPKEVESLKGSRVKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHA 466

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           D+ +    L P  +DSL  +   Q+S G   TV ++  G +F  G +   QLG+
Sbjct: 467 DKKMK---LIPTCVDSLTDYDFIQVSCGTALTVALSVTGVVFTSGSSMHGQLGN 517



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 147/348 (42%), Gaps = 32/348 (9%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASEN 174
           I  G  H  +I+    V+S G+   G +G+  +    VS  ++    A+ HV  V+    
Sbjct: 269 IACGETHAAIITKQGEVYSWGNESSGRIGN--QVNIKVSRPKVVQSLASLHVKDVAYGSK 326

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           H   V  SG++   G+      G  D+      F  +L   L G+   ++  G   T  +
Sbjct: 327 HTCAVTVSGELIEWGEGPYM--GQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAII 384

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAV------ 285
           T  G ++T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+      
Sbjct: 385 TSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESLK--GSRVKCVACGPWHTAAIVEVISD 442

Query: 286 ----TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
               +    ++++G      LGH ++  +L P  + +        ++VS G    VAL  
Sbjct: 443 FKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSL--TDYDFIQVSCGTALTVALSV 500

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +G V+T G    G LG+     KT+      LKS     + +      V+   G V+ +G
Sbjct: 501 TGVVFTSGSSMHGQLGNPHADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWG 560

Query: 402 WMGFGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
               G LG   F +R        P ++D+L   HV  +S G  +T  V
Sbjct: 561 KGKEGQLGLGDFLNRST------PTLVDALEGRHVESLSCGYNYTAAV 602



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 112/236 (47%), Gaps = 20/236 (8%)

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 311
           GDT  +P P  +     +  V  IA G ++   +T  G VYS+G+ S+  +G+       
Sbjct: 248 GDT-SKPLPMLVDSTNML-DVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVS 305

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALGHGDEIDKTLPEPL 370
           +P+ +Q+     +HV  V+ G +H  A+  SG +  WG+G Y G L      ++  P  L
Sbjct: 306 RPKVVQSL--ASLHVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYAR-NQWFPHKL 362

Query: 371 -SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
            S L     V++      T ++  +G +Y +G   FG LG  D   +    RP+ ++SL+
Sbjct: 363 FSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGD---TQGTTRPKEVESLK 419

Query: 430 AHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
              V  ++ G +HT  + +          R +LF +GD +R +LGH   +  L PT
Sbjct: 420 GSRVKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPT 475



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 2/154 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  ++ G+ H   +   G VY+WG    G +G+   I  + P+ + SL S     V  
Sbjct: 264 LDVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAY 323

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
             + T  +  +G +  +G   +  +G  D    ++    ++   L    V +I+ G +HT
Sbjct: 324 GSKHTCAVTVSGELIEWGEGPY--MGQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHT 381

Query: 444 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            ++T  G+L+ +GD     LGH   +G   P E+
Sbjct: 382 AIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEV 415


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 165/346 (47%), Gaps = 13/346 (3%)

Query: 107  VETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 165
            +  S     Q+  G+  T +I  N +V +CG    G LG G      V  T I+      
Sbjct: 4097 IAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFV 4155

Query: 166  VVQV---SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
            V Q+     S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q+
Sbjct: 4156 VTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQM 4214

Query: 223  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            + G   +  +T  G + T G+  +G+LG G+T ++  P+ +  LE    V Q+A G ++ 
Sbjct: 4215 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGY-HVGQVACGLNHT 4273

Query: 283  LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            L V+ +G +V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL  
Sbjct: 4274 LVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTK 4331

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G V+T+G+     L  G   +   P+ +  L       V      T VL  TG VY +G
Sbjct: 4332 DGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWG 4391

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
                G LG    G ++ V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4392 SNSEGQLGL---GHTNHVREPTLVTTLQGKNIHQISAGRCHSAAWT 4434



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 141/303 (46%), Gaps = 26/303 (8%)

Query: 174 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 226
            +  FV+ S G V  CG  S    G  D+N      +  F P    A+K V   + + G 
Sbjct: 419 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RAIKKVSSSKGSDG- 475

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AV+
Sbjct: 476 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS 534

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 345
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V
Sbjct: 535 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 590

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---W 402
           +++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    
Sbjct: 591 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 650

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
           +G GS            LRP++++ L    V  IS G  H + ++    ++ +G+N   Q
Sbjct: 651 LGCGS-------SEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQ 703

Query: 463 LGH 465
            G 
Sbjct: 704 CGQ 706



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 148/319 (46%), Gaps = 11/319 (3%)

Query: 161  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
            PS +   QV   +N    +  +G V  CG+ S    G  +++  +    ++ AL+G    
Sbjct: 4099 PSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVVT 4157

Query: 221  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++ 
Sbjct: 4158 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMSC 4216

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
            G  +   VT +G +++FG+G    LG G   ++  P  +     +G HV +V+ G  H +
Sbjct: 4217 GFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTAL--EGYHVGQVACGLNHTL 4274

Query: 338  ALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
             + + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G 
Sbjct: 4275 VVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGK 4334

Query: 397  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            V+ FG      +G P+ G +    RP+ +  L   H+  ++ G  HT+V++  G ++ +G
Sbjct: 4335 VFTFGQDRL--IGLPE-GRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWG 4391

Query: 457  DNERAQLGHDTLRGCLEPT 475
             N   QLG        EPT
Sbjct: 4392 SNSEGQLGLGHTNHVREPT 4410



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 121/243 (49%), Gaps = 15/243 (6%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 476 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 534

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 535 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 590

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 591 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 649

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        VV +S GD H +AL     VY WG    G  G
Sbjct: 650 --CLGCGSSEATALRPKLIEEL--ATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 705

Query: 358 HGD 360
            G+
Sbjct: 706 QGN 708



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 11/230 (4%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V   G+  HGQL   G  +  PT   IAP        Q+  G +    +  NG V + G 
Sbjct: 4074 VFLWGAGRHGQLAEAGRNILVPT---IAP--SFSQAQQVVCGQNCTFVIQPNGTVLACGE 4128

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 4129 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4188

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 4189 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN--T 4246

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L P  + +L  +HV Q++ GL HT+VV+  G + + FGD +  +LG
Sbjct: 4247 SNKKL-PEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLG 4295



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + S G V   GK
Sbjct: 381 VYVWGSNSSHQLVEGTQEKILQPKLASSF----ADAQTIEAGQYCTFVISSDGSVRACGK 436

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H A++  +  +     T      G V+ +G   +G
Sbjct: 437 GSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 495

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  V++ G L+ +G+ +  +LGH
Sbjct: 496 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGH 552



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            V+ WG G  G L    E  + +  P  +     A QV   +  TFV+   G+V   G   
Sbjct: 4074 VFLWGAGRHGQLA---EAGRNILVPTIAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGS 4130

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4131 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4187

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 4188 KLGHGNSDRQRRPRQIEALQGEE 4210



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +   VV +S  ++H   +    +V
Sbjct: 636 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEV 693

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 694 YAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAG 733


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 7/315 (2%)

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
           SA   +QV   E     V   G+V+  G  +    G   T+  +  P L+E+L+ V  K+
Sbjct: 612 SALRPIQVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDS-VSCPTLLESLQHVFIKK 670

Query: 222 V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           V   +G      L+  G V++ G    G+LGHG+      P+ I  L     VV +A G 
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRG-KEVVDVACGG 729

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           ++   +T +G +Y++G G    LGHG+  D+L+P+ ++      +  V   +GD   + +
Sbjct: 730 AHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCV 789

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                V++WG G  G LG G      +P  +  L+    ++V    + +  L  +GSVY 
Sbjct: 790 TDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYT 849

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +G   +  LG    G  D V RP+ + +L+   V  I+ G  H V  TD G ++ +GDN+
Sbjct: 850 WGKGDYHRLG---HGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDND 906

Query: 460 RAQLGHDTLRGCLEP 474
             QLG  T+    +P
Sbjct: 907 EGQLGDGTVNAIHKP 921



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 139/282 (49%), Gaps = 11/282 (3%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V V++   H   +   G+V++ G+      GH + +    RPR++E+L+G     V  G 
Sbjct: 671 VVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSS-CERPRVIESLRGKEVVDVACGG 729

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA---GPSYML 283
             +  +T  G ++T G   +G+LGHGD+ D+  PK +  L   G  V+  A   G +  L
Sbjct: 730 AHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALS--GWRVRCVACGSGDAQTL 787

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            VT +  V+S+G G    LG G       P  +     +G+ V+RV  G +  VAL +SG
Sbjct: 788 CVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLL--QGMGVIRVECGSQFSVALTASG 845

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            VYTWGKG    LGHG +     P+ +++L+    + +           DTG VY +G  
Sbjct: 846 SVYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDN 905

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             G LG    G  + + +PR++ +L+   ++++S G  HTV 
Sbjct: 906 DEGQLG---DGTVNAIHKPRLVAALQGKKINRVSCGSAHTVA 944



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 8/263 (3%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P   EAL  +   QV  G      +T  G V+  G    G+LG G T     P  +  L+
Sbjct: 605 PMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQ 664

Query: 268 EVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
            V    V + +G  + LA++  G VYS+G G +  LGHG +    +PR I++ R  G  V
Sbjct: 665 HVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLR--GKEV 722

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCAR 384
           V V+ G  H   + +SG +YTWGKG  G LGHGD  D+  P+ + +L       V   + 
Sbjct: 723 VDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSG 782

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             +T  + D   V+ +G   +G LG   RG SD    P  +D L+   V ++  G   +V
Sbjct: 783 DAQTLCVTDDDCVWSWGDGDYGKLG---RGGSDGCKVPLRVDLLQGMGVIRVECGSQFSV 839

Query: 445 VVTDRGRLFGFGDNERAQLGHDT 467
            +T  G ++ +G  +  +LGH T
Sbjct: 840 ALTASGSVYTWGKGDYHRLGHGT 862



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 121/247 (48%), Gaps = 12/247 (4%)

Query: 236 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           G +   G N  GQLG   G  +  P P ++++ L  +    Q+  G   + AVT +G VY
Sbjct: 581 GTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPI----QVVGGEQTLFAVTADGKVY 636

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           + G G+   LG G       P  +++ +   I  V V++G +H +AL + G VY+WG+G 
Sbjct: 637 ATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD 696

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHG++     P  + SL+    V V      +  +  +G +Y +G   +G LG   
Sbjct: 697 DGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLG--- 753

Query: 413 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
            G SD  LRP+ +++L    V  ++  +G   T+ VTD   ++ +GD +  +LG     G
Sbjct: 754 HGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDG 813

Query: 471 CLEPTEI 477
           C  P  +
Sbjct: 814 CKVPLRV 820



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 129/324 (39%), Gaps = 65/324 (20%)

Query: 113 NQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
            ++ + +G  H L +S    V+S G    G LGHG +++ C     I       VV V+ 
Sbjct: 669 KKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSS-CERPRVIESLRGKEVVDVAC 727

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--------------- 216
              H+A +  SG+++T G       GH D++  + RP+ VEAL G               
Sbjct: 728 GGAHSACITASGELYTWGKGRYGRLGHGDSDDQL-RPKKVEALSGWRVRCVACGSGDAQT 786

Query: 217 -----------------------------VPCK----------QVTAGLNFTGFLTIRGH 237
                                        VP +          +V  G  F+  LT  G 
Sbjct: 787 LCVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGS 846

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V+T G   + +LGHG       PK +A L+    V+ IA G  + +A T  G VY++G  
Sbjct: 847 VYTWGKGDYHRLGHGTDDHVRRPKRVAALQG-KKVICIAVGSLHCVACTDTGEVYTWGDN 905

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LG G  +   +PR +   + K I+  RVS G  H VA  +         G CG + 
Sbjct: 906 DEGQLGDGTVNAIHKPRLVAALQGKKIN--RVSCGSAHTVAWSTCNPSTA---GACGRMP 960

Query: 358 HGDEIDKTLPE--PLSSLKSHLAV 379
               ++  L    P+ +L++  A+
Sbjct: 961 PAVPLEYDLLRDIPIPTLRNRYAL 984



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 5/138 (3%)

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           SG +  WG  + G LG  +     LP P  +L +   +QV   ++  F +   G VY   
Sbjct: 580 SGTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYA-- 637

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ--ISTGLYHTVVVTDRGRLFGFGDNE 459
             G+G+ G    G +D V  P +L+SL+   + +  +++G  H + ++  G ++ +G+ +
Sbjct: 638 -TGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD 696

Query: 460 RAQLGHDTLRGCLEPTEI 477
             +LGH     C  P  I
Sbjct: 697 DGKLGHGNKSSCERPRVI 714


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 147/303 (48%), Gaps = 21/303 (6%)

Query: 107 VETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP---- 161
           V  S  N +Q+     HT  ++SN  +++ G S  G LGHG +    +S   ++ P    
Sbjct: 87  VNLSLKNVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHG-QFELSISNNVVSQPMKVK 145

Query: 162 --SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
                 V+QVS    H   +    +  T G       GH DT + IF P+L+E+L G+P 
Sbjct: 146 ALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDT-QDIFTPKLIESLAGLPI 204

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAG 278
           K+++ G + T  L + G ++  G    G+LG G T D   P+ +  PLE++  + +++ G
Sbjct: 205 KEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDI-QITKVSLG 263

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             +  AVT  G VY++G G    LGH   G +HD L P+ +    +    +V +S G+ H
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGR--LGHIFNGPEHDFLSPKRLSNLEKA--FIVDISCGNSH 319

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
            VAL   G +YTW  G    +GHG + I   +P     L++   VQV      +  L D 
Sbjct: 320 SVALSDVGDIYTW--GMTKNIGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIALSDI 377

Query: 395 GSV 397
           G++
Sbjct: 378 GAL 380



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 131/266 (49%), Gaps = 18/266 (6%)

Query: 208 PRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           P LV+ L+ +    +V+ G N++  +T  G +   G    GQLG G+  D   P+    L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL------QPRAIQTFR 320
           +   +V+Q+A    +  A+  NG +Y++G   N  LGHG+    +      QP  ++   
Sbjct: 92  K---NVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL- 147

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
            +G  V++VS G  H   L       TWG G  G LGHGD  D   P+ + SL      +
Sbjct: 148 -EGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKE 206

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTG 439
           +      T +L+ TG +Y FG   FG LGF   G +D VL PR+L+  L    ++++S G
Sbjct: 207 ISCGGHHTAILLVTGKLYMFGGGAFGKLGF---GSTDDVLIPRLLEGPLEDIQITKVSLG 263

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGH 465
             H+  VT  G+++ +G   R  LGH
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGR--LGH 287



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 13/239 (5%)

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           GS  +GQ G       P P  +  L  + S+ +++ G +Y  A+T +G +  +G G    
Sbjct: 14  GSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQ 73

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD- 360
           LG G   D L PR   + +    +V++V+  D H  A+ S+G +YTWG    G LGHG  
Sbjct: 74  LGFGNLEDCLVPRVNLSLK----NVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQF 129

Query: 361 --EIDKTL---PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
              I   +   P  + +L+    +QV      T  L D      +G    G LG  D   
Sbjct: 130 ELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD--- 186

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           +  +  P++++SL    + +IS G +HT ++   G+L+ FG     +LG  +    L P
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIP 245


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 847  VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 905

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 906  AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 964

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 965  LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 1022

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 1023 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 1082

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 1083 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1120



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 833  PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 892

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 893  LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 951

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 952  DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 1011

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 1012 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 1068

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 1069 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 1097



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 845  KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 903

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 904  GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 962

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 963  LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 1021

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 1022 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 1079

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 1080 DNDEGQLGDG 1089



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 757 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 812

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 813 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 872

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 873 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 932

Query: 413 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
              S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 933 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 989

Query: 471 CLEPTEI 477
           C  P +I
Sbjct: 990 CKVPMKI 996



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 90/179 (50%), Gaps = 14/179 (7%)

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
           +PR I+  + K I    ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ + 
Sbjct: 5   KPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 62

Query: 372 SLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
            L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L 
Sbjct: 63  VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLN 119

Query: 430 AHHVSQISTGLYHTVVVTDRG-----RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
              V QI  G   ++ +T  G     +++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 120 GQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 176



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 7/158 (4%)

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           +PRL+EALK    + +  G + +  LT  G ++T G   +G+LGHGD   +  PK +  L
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 267 EEVG-SVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
             +G  V+Q+A G   +  LA+T  G+V+S+G G    LG G       P+ I+  R  G
Sbjct: 65  --LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE--RLNG 120

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
             V ++  G +  +AL  SG V+TW     G   HG +
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQ 158



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 7/192 (3%)

Query: 260 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           P+ I  L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++  
Sbjct: 6   PRLIEALK-TKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 320 RRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 377
              G  V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L    
Sbjct: 65  L--GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 122

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSL--GFPDRGVSDKVLRPRILDSLRAHHVSQ 435
             Q+    + +  L  +G V+ +    +G    G    G +    +P ++  L    +++
Sbjct: 123 VCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITR 182

Query: 436 ISTGLYHTVVVT 447
           ++ G  H+V  T
Sbjct: 183 VACGSSHSVAWT 194



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 957  SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 1015

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 1016 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 1074

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 1075 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 1120



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 747 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 806

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 807 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 863

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            ++ +G+ E  +LGH     C  P  I
Sbjct: 864 EVYSWGEAEDGKLGHGNRSPCDRPRVI 890



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 11/178 (6%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 20  IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 78

Query: 176 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           A    +   G VF+ GD      G R  +     P+ +E L G    Q+  G  F+  LT
Sbjct: 79  AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 137

Query: 234 IRG-----HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
             G      V+  G N HGQ G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 138 KSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 194


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 167/362 (46%), Gaps = 22/362 (6%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G YHT  L+S+  V+S G    G LG+G   T     T +      HV+ V     
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNG---TWSARTTPVMAKGLNHVIDVHTGVR 93

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-LT 233
               +   G V+T G N +   G   T   +  P  V  L G+  K V+ GL +    L+
Sbjct: 94  STMALRSDGTVWTWGSNENGQLG-IGTVTDMNVPGQVSGLSGI--KAVSGGLGYHSMALS 150

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V T G N +G+LG+G TL + TP  +A L +V     IAAG  + LA+  +G V++
Sbjct: 151 EDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDV---TAIAAGGYFSLALKSDGTVWA 207

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G   +  LG G   D   P  +         V+ ++AG  H +A+   G V+ WGK   
Sbjct: 208 WGVNGDGELGDGTTTDRYVPVQVAGL----TDVMAIAAGGSHSLAVTQDGTVWAWGKNTY 263

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G   ++T P  + +L+ H+ V V      +  L  TG+V+ +G      LG    
Sbjct: 264 GTLGDGTRTNRTRPVQIKNLQ-HI-VAVAGGGYHSLALDRTGNVWSWGDNSQRQLGV--- 318

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G +   L P  +  +   HV +I+ G +H+V +   G ++G+G N   QLG  T      
Sbjct: 319 GSNASSLIPVPVSGI--EHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGTSSTRDT 376

Query: 474 PT 475
           PT
Sbjct: 377 PT 378



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 140/304 (46%), Gaps = 18/304 (5%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A ++ SG+V++ G       G+  T      P + + L  V    V  G+  T  L  
Sbjct: 44  HTASLVSSGEVYSWGYGDRGQLGN-GTWSARTTPVMAKGLNHV--IDVHTGVRSTMALRS 100

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY-MLAVTGNGVVYS 293
            G V T GSN +GQLG G   D   P  ++ L  + +V   + G  Y  +A++ +G V++
Sbjct: 101 DGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSGIKAV---SGGLGYHSMALSEDGSVWT 157

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G   N  LG+G    +  P  +         V  ++AG    +AL S G V+ WG    
Sbjct: 158 WGKNDNGELGNGTTLQQNTPVQVAGLN----DVTAIAAGGYFSLALKSDGTVWAWGVNGD 213

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G   D+ +P  ++ L   +A+   A    +  +   G+V+ +G   +G+LG    
Sbjct: 214 GELGDGTTTDRYVPVQVAGLTDVMAI--AAGGSHSLAVTQDGTVWAWGKNTYGTLG---D 268

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G      RP  + +L+  H+  ++ G YH++ +   G ++ +GDN + QLG  +    L 
Sbjct: 269 GTRTNRTRPVQIKNLQ--HIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSLI 326

Query: 474 PTEI 477
           P  +
Sbjct: 327 PVPV 330


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 313 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 371

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 372 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 430

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 431 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 488

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 489 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 548

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
            G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 549 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 585



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 299 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 358

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 359 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 417

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 418 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 477

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
           + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 478 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 534

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            T+ G ++ +GDN+  QLG  T      P
Sbjct: 535 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 563



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 126/265 (47%), Gaps = 8/265 (3%)

Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
            ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 311 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 369

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
              H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 370 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 428

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 429 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 487

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 488 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 545

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLK 374
               G LG G       P  +++L+
Sbjct: 546 DNDEGQLGDGTTNAIQRPRLVAALQ 570



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 223 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 278

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 279 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 338

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 339 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 398

Query: 413 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
              S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 399 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 455

Query: 471 CLEPTEI 477
           C  P +I
Sbjct: 456 CKVPMKI 462



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 423 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 481

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 482 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 540

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 541 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 586



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 213 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 272

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 273 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 329

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            ++ +G+ E  +LGH     C  P  I
Sbjct: 330 EVYSWGEAEDGKLGHGNRSPCDRPRVI 356


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 168/356 (47%), Gaps = 21/356 (5%)

Query: 132 VFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +F  G++  G LG G  E  Q +  ++I +   A + Q++    H  F+  +G+V+ CG+
Sbjct: 3   LFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGN 62

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N     GH   N P  RP L+  L+      +  G   +  LT  G V + G N  GQLG
Sbjct: 63  NDQAQLGH---NLPTKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLG 119

Query: 251 HG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
              D      PK I  L     VVQIA G ++ LA+T  G +YS+GS     LG  +   
Sbjct: 120 QSTDQSIIELPKIIRSLVS-KHVVQIACGNNHSLALTSCGELYSWGSNIYGQLG-VKPPQ 177

Query: 310 ELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           EL     P  + T    GI +  ++ G  H   +  S  V+ +G+  CG LG  DE ++ 
Sbjct: 178 ELSHCNYPLRLTTLL--GIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRA 235

Query: 366 LPEPLSSLKSHLAVQ--VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            P  L +L++ L V+   C  +   F L + G V+  G   +G LG    G +   + PR
Sbjct: 236 YPTQLKTLRT-LGVRFVACGDEFSVF-LTNEGGVFTCGAGTYGQLG---HGSNTNEMLPR 290

Query: 424 ILDSLRAHHVSQISTGLYHTV-VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           ++  L    ++Q++ G  HT+ +V  RGR++GFG     QLG+ +      P E+ 
Sbjct: 291 MVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEVL 346



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 137/304 (45%), Gaps = 21/304 (6%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  HTL L +N  V++CG++    LGH   T + +    +       VV ++    
Sbjct: 40  QIACGHRHTLFLTANGKVYACGNNDQAQLGHNLPTKRPLLIPEL---QNYVVVAIACGSR 96

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  + + GQV + GDN     G       I  P+++ +L      Q+  G N +  LT 
Sbjct: 97  HSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTS 156

Query: 235 RGHVHTCGSNTHGQLG--------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
            G +++ GSN +GQLG        H +   R T     PL        IA G ++   ++
Sbjct: 157 CGELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPL------ATIACGGNHSFLIS 210

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +  V+ FG  +   LG  ++ +   P  ++T R  G+    V+ GDE  V L + G V+
Sbjct: 211 KSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRF--VACGDEFSVFLTNEGGVF 268

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGF 405
           T G G  G LGHG   ++ LP  +  L      QV    R T  LV + G VYGFG    
Sbjct: 269 TCGAGTYGQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 328

Query: 406 GSLG 409
           G LG
Sbjct: 329 GQLG 332



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 6/150 (4%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H+ LIS SS VF  G + CG LG   E+ +    T++       V  V+  +  
Sbjct: 199 IACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYP-TQLKTLRTLGVRFVACGDEF 257

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFLT 233
           + F+   G VFTCG  +    GH  +TN  +  PR+V  L G    QV  G   T   + 
Sbjct: 258 SVFLTNEGGVFTCGAGTYGQLGHGSNTNEML--PRMVMELMGSTITQVACGNRHTLALVP 315

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
            RG V+  G  + GQLG+  T     P+ +
Sbjct: 316 SRGRVYGFGLGSSGQLGNRSTNSVTLPQEV 345


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 147/303 (48%), Gaps = 21/303 (6%)

Query: 107 VETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP---- 161
           V  S  N +Q+     HT  ++SN  +++ G S  G LGHG +    +S   ++ P    
Sbjct: 87  VNLSLKNVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHG-QFELSISNNVVSQPMKVK 145

Query: 162 --SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
                 V+QVS    H   +    +  T G       GH DT + IF P+L+E+L G+P 
Sbjct: 146 ALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDT-QDIFTPKLIESLAGLPI 204

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAG 278
           K+++ G + T  L + G ++  G    G+LG G T D   P+ +  PLE++  + +++ G
Sbjct: 205 KEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDI-QITKVSLG 263

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             +  AVT  G VY++G G    LGH   G +HD L P+ +    +    +V +S G+ H
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGR--LGHIFNGPEHDFLSPKRLSNLEKA--FIVDISCGNSH 319

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
            VAL   G +YTW  G    +GHG + I   +P     L++   VQV      +  L D 
Sbjct: 320 SVALSDVGDIYTW--GMTKNIGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIALSDI 377

Query: 395 GSV 397
           G++
Sbjct: 378 GAL 380



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 131/266 (49%), Gaps = 18/266 (6%)

Query: 208 PRLVEALKGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           P LV+ L+ +    +V+ G N++  +T  G +   G    GQLG G+  D   P+    L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL------QPRAIQTFR 320
           +   +VVQ+A    +  A+  NG +Y++G   N  LGHG+    +      QP  ++   
Sbjct: 92  K---NVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKAL- 147

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
            +G  V++VS G  H   L       TWG G  G LGHGD  D   P+ + SL      +
Sbjct: 148 -EGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKE 206

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTG 439
           +      T +L+ TG +Y FG   FG LGF   G +D VL PR+L+  L    ++++S G
Sbjct: 207 ISCGGHHTAILLVTGKLYMFGGGAFGKLGF---GSTDDVLIPRLLEGPLEDIQITKVSLG 263

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGH 465
             H+  VT  G+++ +G   R  LGH
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGR--LGH 287



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 111/239 (46%), Gaps = 13/239 (5%)

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           GS+ +GQ G       P P  +  L  + S+ +++ G +Y  A+T +G +  +G G    
Sbjct: 14  GSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQ 73

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD- 360
           LG G   D L PR   + +    +VV+V+  D H  A+ S+G +YTWG    G LGHG  
Sbjct: 74  LGFGNLEDCLVPRVNLSLK----NVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQF 129

Query: 361 --EIDKTL---PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
              I   +   P  + +L+    +QV      T  L D      +G    G LG  D   
Sbjct: 130 ELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGD--- 186

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           +  +  P++++SL    + +IS G +HT ++   G+L+ FG     +LG  +    L P
Sbjct: 187 TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIP 245


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 153/350 (43%), Gaps = 27/350 (7%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +F  G  L  VL     +   VS  R+ N      V  VS  E HAA V + G+VF+ G 
Sbjct: 170 IFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGK 229

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
                 GH+  +  +  P+++E+L     K +  G   T  L I G +   G  TH    
Sbjct: 230 EDGGRLGHK-VSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGV 288

Query: 251 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
             D   R      K   PLE V SVV++A G  +   ++ +G ++++G G+   LGHG+ 
Sbjct: 289 WDDQCQRSQWYPHKLFGPLEGV-SVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDT 347

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 357
               +P+ +++   KG+ V  V+ G  H  A+            SG ++TWG    G LG
Sbjct: 348 SSVARPKEVESL--KGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLG 405

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRG 414
           H D+  K +P  + +L      QV   K  T  L  TG V+  G    G LG     D  
Sbjct: 406 HSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSS 465

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +        +   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 466 ICS------VEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLG 509



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV+++  + H A +  SGQ+FT GD +    GH DT+  + RP+ VE+LKG+  K V  G
Sbjct: 312 VVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTS-SVARPKEVESLKGLRVKAVACG 370

Query: 226 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
              T  +     T++     G + T G    G+LGH D   +  P  +  L +     Q+
Sbjct: 371 PWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD-SDFAQV 429

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 333
           +   +  +A+T  GVV++ GS  +  LG     D     +I +     K   V  +S+G 
Sbjct: 430 SCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDS----SICSVEGPLKTEFVREISSGS 485

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            HV  L  +G V+TWGKG  G LG G+ +D++ P  + +L+
Sbjct: 486 SHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALE 526



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 17/308 (5%)

Query: 174 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGF 231
           +H A+   S   +F  GD        RDT++  +  PRL+ + + +  + V+ G      
Sbjct: 158 SHVAYGTDSLKDIFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAI 217

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +T +G V + G    G+LGH  ++    PK I  L     V  IA G  +  A+  +G +
Sbjct: 218 VTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA-FTHVKAIAFGAKHTCALAISGEL 276

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           + +G G++      +Q    Q    + F   +G+ VV+++ G  H   + SSG ++T+G 
Sbjct: 277 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 336

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGF 400
           G  G LGHGD      P+ + SLK      V      T  +V+          +G ++ +
Sbjct: 337 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW 396

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G    G LG  D+   +  L P  + +L     +Q+S     TV +T  G +F  G  E 
Sbjct: 397 GDADRGKLGHSDK---ESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEH 453

Query: 461 AQLGHDTL 468
            QLG   L
Sbjct: 454 GQLGSHRL 461



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G++HT +IS+S  +F+ G    GVLGHG +T+       +       V  V+   
Sbjct: 313 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG-DTSSVARPKEVESLKGLRVKAVACGP 371

Query: 174 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            H A +++          SG++FT GD      GH D    +  P  V+AL      QV+
Sbjct: 372 WHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV-PTCVKALTDSDFAQVS 430

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
                T  LTI G V T GS  HGQLG     D        PL +   V +I++G S++ 
Sbjct: 431 CAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPL-KTEFVREISSGSSHVA 489

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            +T NG V+++G G+   LG G   D   P  ++    K   V  ++ G    VA+
Sbjct: 490 VLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDK--QVDSIACGSNFTVAV 543



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%)

Query: 252 GDTL-----DRPTPKSIAPLEEVGSVVQI------AAGPSYMLAVTGNGVVYSFGSGSNF 300
           GD L     DR T K+   L  + +  QI      + G  +   VT  G V+S+G     
Sbjct: 174 GDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGG 233

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LGH      L P+ I++      HV  ++ G +H  AL  SG ++ WG+G        D
Sbjct: 234 RLGHKVSVGVLHPKIIESL--AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDD 291

Query: 361 EIDKTLPEP---LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           +  ++   P      L+    V++   +  T ++  +G ++ +G   FG LG  D   + 
Sbjct: 292 QCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGD---TS 348

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDT 467
            V RP+ ++SL+   V  ++ G +HT  + +           G+LF +GD +R +LGH  
Sbjct: 349 SVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSD 408

Query: 468 LRGCLEPT 475
               L PT
Sbjct: 409 KESKLVPT 416



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  VS G++H   +   G V++WGK   G LGH   +    P+ + SL       +  
Sbjct: 203 LDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAF 262

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 442
             + T  L  +G ++ +G  G  SLG  D         P ++   L    V +++ G +H
Sbjct: 263 GAKHTCALAISGELFEWG-EGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWH 321

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T +++  G+LF +GD     LGH        P E+
Sbjct: 322 TAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEV 356


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 153/350 (43%), Gaps = 27/350 (7%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +F  G  L  VL     +   VS  R+ N      V  VS  E HAA V + G+VF+ G 
Sbjct: 235 IFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGK 294

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
                 GH+  +  +  P+++E+L     K +  G   T  L I G +   G  TH    
Sbjct: 295 EDGGRLGHK-VSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGV 353

Query: 251 HGDTLDRPTP---KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
             D   R      K   PLE V SVV++A G  +   ++ +G ++++G G+   LGHG+ 
Sbjct: 354 WDDQCQRSQWYPHKLFGPLEGV-SVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDT 412

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALG 357
               +P+ +++   KG+ V  V+ G  H  A+            SG ++TWG    G LG
Sbjct: 413 SSVARPKEVESL--KGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLG 470

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRG 414
           H D+  K +P  + +L      QV   K  T  L  TG V+  G    G LG     D  
Sbjct: 471 HSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSS 530

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +        +   L+   V +IS+G  H  V+T  G++F +G     QLG
Sbjct: 531 ICS------VEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLG 574



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 18/221 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV+++  + H A +  SGQ+FT GD +    GH DT+  + RP+ VE+LKG+  K V  G
Sbjct: 377 VVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTS-SVARPKEVESLKGLRVKAVACG 435

Query: 226 LNFTGFL-----TIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
              T  +     T++     G + T G    G+LGH D   +  P  +  L +     Q+
Sbjct: 436 PWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD-SDFAQV 494

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 333
           +   +  +A+T  GVV++ GS  +  LG     D     +I +     K   V  +S+G 
Sbjct: 495 SCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDS----SICSVEGPLKTEFVREISSGS 550

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            HV  L  +G V+TWGKG  G LG G+ +D++ P  + +L+
Sbjct: 551 SHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALE 591



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 136/308 (44%), Gaps = 17/308 (5%)

Query: 174 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGF 231
           +H A+   S   +F  GD        RDT++  +  PRL+ + + +  + V+ G      
Sbjct: 223 SHVAYGTDSLKDIFVWGDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAI 282

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +T +G V + G    G+LGH  ++    PK I  L     V  IA G  +  A+  +G +
Sbjct: 283 VTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA-FTHVKAIAFGAKHTCALAISGEL 341

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           + +G G++      +Q    Q    + F   +G+ VV+++ G  H   + SSG ++T+G 
Sbjct: 342 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 401

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD----------TGSVYGF 400
           G  G LGHGD      P+ + SLK      V      T  +V+          +G ++ +
Sbjct: 402 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW 461

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G    G LG  D+   +  L P  + +L     +Q+S     TV +T  G +F  G  E 
Sbjct: 462 GDADRGKLGHSDK---ESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEH 518

Query: 461 AQLGHDTL 468
            QLG   L
Sbjct: 519 GQLGSHRL 526



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 16/236 (6%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G++HT +IS+S  +F+ G    GVLGHG +T+       +       V  V+   
Sbjct: 378 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG-DTSSVARPKEVESLKGLRVKAVACGP 436

Query: 174 NHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            H A +++          SG++FT GD      GH D    +  P  V+AL      QV+
Sbjct: 437 WHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLV-PTCVKALTDSDFAQVS 495

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
                T  LTI G V T GS  HGQLG     D        PL +   V +I++G S++ 
Sbjct: 496 CAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPL-KTEFVREISSGSSHVA 554

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            +T NG V+++G G+   LG G   D   P  ++    K   V  ++ G    VA+
Sbjct: 555 VLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDK--QVDSIACGSNFTVAV 608



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 29/248 (11%)

Query: 252 GDTL-----DRPTPKSIAPLEEVGSVVQI------AAGPSYMLAVTGNGVVYSFGSGSNF 300
           GD L     DR T K+   L  + +  QI      + G  +   VT  G V+S+G     
Sbjct: 239 GDVLGSVLDDRDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGG 298

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LGH      L P+ I++      HV  ++ G +H  AL  SG ++ WG+G        D
Sbjct: 299 RLGHKVSVGVLHPKIIESL--AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDD 356

Query: 361 EIDKTLPEP---LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           +  ++   P      L+    V++   +  T ++  +G ++ +G   FG LG  D   + 
Sbjct: 357 QCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGD---TS 413

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDT 467
            V RP+ ++SL+   V  ++ G +HT  + +           G+LF +GD +R +LGH  
Sbjct: 414 SVARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSD 473

Query: 468 LRGCLEPT 475
               L PT
Sbjct: 474 KESKLVPT 481



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  VS G++H   +   G V++WGK   G LGH   +    P+ + SL       +  
Sbjct: 268 LDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAF 327

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 442
             + T  L  +G ++ +G  G  SLG  D         P ++   L    V +++ G +H
Sbjct: 328 GAKHTCALAISGELFEWG-EGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWH 386

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T +++  G+LF +GD     LGH        P E+
Sbjct: 387 TAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEV 421


>gi|198421655|ref|XP_002121487.1| PREDICTED: similar to hect domain and RLD 4 [Ciona intestinalis]
          Length = 1029

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 146/316 (46%), Gaps = 22/316 (6%)

Query: 156 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG---DNSSFCCGHRDTNRPIFRPRLVE 212
           T IN      +  V  S   A F+L+ G V T G   DN     G             V 
Sbjct: 23  TEINCFGKTIIKSVRVSRTIAVFLLEDGTVHTFGAENDNIGHSAGSTK----------VS 72

Query: 213 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           AL+ V    +  G +    +  +G V+  G N   QLG  D    P+PK I  L     +
Sbjct: 73  ALETVHIVDIALGDSHILAIDDKGKVYGWGGNDKDQLGWTDGNCYPSPKKIKSLS--NKI 130

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSA 331
           VQ+A G S+ L +  NG ++S GS +   LG G++   EL+P        KGI   ++SA
Sbjct: 131 VQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTELRP----LISLKGIPFSQISA 186

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           G  H   +  SG V+ WG+   G LG GD +D+ +P  L +L+S     +CA +  T  L
Sbjct: 187 GFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNVPVLLKALRSLSVKYICAGELHTAAL 246

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQISTGLYHTV-VVTDR 449
              G V+ FG   FG LG    G     V  PR +  L  + V+QI+ G  HTV  V   
Sbjct: 247 TLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQIACGAQHTVCYVGKT 306

Query: 450 GRLFGFGDNERAQLGH 465
           G ++ FG+N  +QLG+
Sbjct: 307 GNVYTFGNNNHSQLGY 322



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 18/212 (8%)

Query: 107 VETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQ----CVSFTRINFP 161
           +++ +   +Q+  G  H+L + SN +++S GS+  G LG G +++      +S   I F 
Sbjct: 123 IKSLSNKIVQVACGHSHSLFLGSNGALWSAGSNNYGQLGFGDKSSTELRPLISLKGIPFS 182

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCK 220
                 Q+SA   H+  V  SG VF  G N +   G  D  +R +  P L++AL+ +  K
Sbjct: 183 ------QISAGFWHSFCVTHSGAVFCWGRNDNGQLGLGDCVDRNV--PVLLKALRSLSVK 234

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS-VVQIAA 277
            + AG   T  LT+ G V T GSN  GQLGHG +   P P S      E +G+ V QIA 
Sbjct: 235 YICAGELHTAALTLDGGVFTFGSNQFGQLGHGSSGPEPLPVSTPRKIFELMGNEVTQIAC 294

Query: 278 GPSYMLAVTGN-GVVYSFGSGSNFCLGHGEQH 308
           G  + +   G  G VY+FG+ ++  LG+  +H
Sbjct: 295 GAQHTVCYVGKTGNVYTFGNNNHSQLGYIPKH 326


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 147/317 (46%), Gaps = 30/317 (9%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V+   NHAA V + G+V+  G       G R  +  I  P++V+ L  +  K V  G
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQR-IDMDISSPKIVDTLSDIRVKNVACG 364

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-------TPKSIAPLEEVGSVVQIAAG 278
              T  LT  G V+  G++    +   D +D         T K   P+E + S+  IA G
Sbjct: 365 EYHTCALTDSGEVYAWGND----VSCSDLVDEGRIRSQWLTHKLSLPVEGI-SISSIACG 419

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             +   V+  G ++++G G+   LGHG  H    P+ +++   KG+ V  V+ G  H  A
Sbjct: 420 EWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESL--KGLCVRSVACGTWHTAA 477

Query: 339 L-----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
           +            S+G ++TWG    G LGH D ++K +P  +S L  +  VQV   +  
Sbjct: 478 IIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMM 537

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T  L + G V+  G   +G LG P   V D+ +   +   L+  +V  IS G YH  V+T
Sbjct: 538 TLALTNMGKVFAMGSAKYGQLGNPH--VKDRAV--VVEGMLKQEYVKMISCGSYHVAVLT 593

Query: 448 DRGRLFGFGDNERAQLG 464
             G ++ +G  E  +LG
Sbjct: 594 SSGSVYTWGKGENGELG 610



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 135/282 (47%), Gaps = 24/282 (8%)

Query: 103 SSDIVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGS--SLCGVLGHGPETTQCVSFTRI 158
           S  IV+T +  +++ +  G YHT  +++S  V++ G+  S   ++  G   +Q ++  ++
Sbjct: 346 SPKIVDTLSDIRVKNVACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTH-KL 404

Query: 159 NFP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
           + P     +  ++  E H A V   G++FT GD +    GH  +      P+ VE+LKG+
Sbjct: 405 SLPVEGISISSIACGEWHTAIVSSCGRLFTYGDGTFGVLGH-GSYHSFSSPKEVESLKGL 463

Query: 218 PCKQVTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
             + V  G   T            + T  G + T G    G+LGH D +++  P  ++ L
Sbjct: 464 CVRSVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQL 523

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIH 325
            +    VQ++ G    LA+T  G V++ GS     LG+    D    RA+      K  +
Sbjct: 524 VDY-DFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKD----RAVVVEGMLKQEY 578

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           V  +S G  HV  L SSG VYTWGKG  G LG GD  ++  P
Sbjct: 579 VKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTP 620



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 18/163 (11%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  V+ G  H   +   G VY WG+G CG LG   ++D + P+ + +L       V  
Sbjct: 304 LDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTLSDIRVKNVAC 363

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH---------VS 434
            +  T  L D+G VY +G          D   SD V   RI      H          +S
Sbjct: 364 GEYHTCALTDSGEVYAWG---------NDVSCSDLVDEGRIRSQWLTHKLSLPVEGISIS 414

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            I+ G +HT +V+  GRLF +GD     LGH +      P E+
Sbjct: 415 SIACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEV 457



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 20/236 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQ-----CVSFTRINFPSA 163
           I  G +HT ++S+   +F+ G    GVLGHG       P+  +     CV          
Sbjct: 416 IACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTWHT 475

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++++SA      +   +G++FT GD      GH D    +  P  V  L      QV+
Sbjct: 476 AAIIEISAE--RFKYNTSTGKLFTWGDADEGRLGHADNVNKLV-PTCVSQLVDYDFVQVS 532

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G   T  LT  G V   GS  +GQLG+    DR     +  + +   V  I+ G  ++ 
Sbjct: 533 CGRMMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV--VVEGMLKQEYVKMISCGSYHVA 590

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            +T +G VY++G G N  LG G+  +   P  ++  R + +    ++ G    VA+
Sbjct: 591 VLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDT--ITCGPSFTVAI 644



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 19/218 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  +A G ++   VT  G VY +G G    LG     D   P+ + T     I V  V+ 
Sbjct: 306 VQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTL--SDIRVKNVAC 363

Query: 332 GDEHVVALDSSGYVYTWGKGY-CGAL-GHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKT 388
           G+ H  AL  SG VY WG    C  L   G    + L   LS     +++  +   +  T
Sbjct: 364 GEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWHT 423

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 446
            ++   G ++ +G   FG LG    G       P+ ++SL+   V  ++ G +HT  +  
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLG---HGSYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIE 480

Query: 447 ---------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
                    T  G+LF +GD +  +LGH      L PT
Sbjct: 481 ISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPT 518



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 80/187 (42%), Gaps = 19/187 (10%)

Query: 102 HSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           H++ I+E SA         +Y+T   S   +F+ G +  G LGH     + V  T ++  
Sbjct: 474 HTAAIIEISA------ERFKYNT---STGKLFTWGDADEGRLGHADNVNKLVP-TCVSQL 523

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVP 218
                VQVS        +   G+VF  G       G+     P  + R V     LK   
Sbjct: 524 VDYDFVQVSCGRMMTLALTNMGKVFAMGSAKYGQLGN-----PHVKDRAVVVEGMLKQEY 578

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
            K ++ G      LT  G V+T G   +G+LG GDT +R TP  +  L +   V  I  G
Sbjct: 579 VKMISCGSYHVAVLTSSGSVYTWGKGENGELGLGDTENRYTPCFVEALRD-RQVDTITCG 637

Query: 279 PSYMLAV 285
           PS+ +A+
Sbjct: 638 PSFTVAI 644


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 157/332 (47%), Gaps = 23/332 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V+    HAA V +  +VFT G+  S   GH      IF+PRLVE+L     + +  G
Sbjct: 288 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGH-GAGTSIFQPRLVESLSICNVETIACG 346

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++T G  TH  G LGHG  +    PK ++ PLE +  V  ++ G  + 
Sbjct: 347 EFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGL-QVSAVSCGTWHT 405

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+   
Sbjct: 406 ALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESL--KGLRTISVSCGVWHTAAVVEV 463

Query: 340 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
                  SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L  
Sbjct: 464 IMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTT 523

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRL 452
           +G ++  G   +G LG P+    +    PR++ + L    V ++  G YH  V+T  G +
Sbjct: 524 SGHIFTAGSSVYGQLGNPN----NDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEV 579

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           + +G     +LGH  +     PT  F++ + +
Sbjct: 580 YTWGKGANGRLGHGDIADRKTPT--FVEALRD 609



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 20/338 (5%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           ++  L+   + VF+ G    G LGHG  T+       +   S  +V  ++  E H   + 
Sbjct: 296 KHAALVTRQAEVFTWGEECSGRLGHGAGTS-IFQPRLVESLSICNVETIACGEFHTCAIT 354

Query: 181 QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
            +G ++T GD  +++   GH          R+   L+G+    V+ G   T  +T  G +
Sbjct: 355 ATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKL 414

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 289
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV         T +G
Sbjct: 415 YTFGDGTFGVLGHGNRETISYPKEVESLKGL-RTISVSCGVWHTAAVVEVIMAQSNTSSG 473

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            ++++G G  + LGHG++  +L+P  + +      H  +   G    + L +SG+++T G
Sbjct: 474 KLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFH--KAVCGHTLTIGLTTSGHIFTAG 531

Query: 350 KGYCGALGHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
               G LG+ +  D   P  +   L     V+V        VL  +G VY +G    G L
Sbjct: 532 SSVYGQLGNPNN-DGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRL 590

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           G  D  ++D+   P  +++LR   V +I+ G   T  +
Sbjct: 591 GHGD--IADRKT-PTFVEALRDRSVKRIACGSGFTAAI 625



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 130/277 (46%), Gaps = 22/277 (7%)

Query: 113 NQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQ 168
           N   I  G +HT  I+ +     +  G+   G+LGHG   +  +   R++ P     V  
Sbjct: 339 NVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGPLEGLQVSA 397

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           VS    H A +  SG+++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+
Sbjct: 398 VSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRET---ISYPKEVESLKGLRTISVSCGV 454

Query: 227 NFTGFL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
             T  +         T  G + T G     +LGHGD   +  P  +  L +  +  +   
Sbjct: 455 WHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-NFHKAVC 513

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G +  + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V  G  HV 
Sbjct: 514 GHTLTIGLTTSGHIFTAGSSVYGQLGN-PNNDGRYPRLVEE-KLGGGGVVEVVCGAYHVA 571

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            L  SG VYTWGKG  G LGHGD  D+  P  + +L+
Sbjct: 572 VLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALR 608



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 16/272 (5%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           I  P+ +E+   +    V  G+     +T +  V T G    G+LGHG       P+ + 
Sbjct: 274 ILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVE 333

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  + +V  IA G  +  A+T  G +Y++G G++    LGHG       P+ + +   +
Sbjct: 334 SL-SICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRV-SGPLE 391

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P+ + SLK    + V 
Sbjct: 392 GLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVS 451

Query: 383 ARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
                T  +V+         +G ++ +G      LG  DR      L+P  + SL  ++ 
Sbjct: 452 CGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSK---LKPTCVPSLIDYNF 508

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            +   G   T+ +T  G +F  G +   QLG+
Sbjct: 509 HKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGN 540



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 2/155 (1%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + V  V+ G +H   +     V+TWG+   G LGHG       P  + SL       +  
Sbjct: 286 LDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIAC 345

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYH 442
            +  T  +  TG +Y +G  G  + G    G +     P R+   L    VS +S G +H
Sbjct: 346 GEFHTCAITATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWH 404

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T ++T  G+L+ FGD     LGH        P E+
Sbjct: 405 TALITSSGKLYTFGDGTFGVLGHGNRETISYPKEV 439


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 277 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 336

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 337 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 395

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            V   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 396 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 455

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
           + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 456 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 512

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            T+ G ++ +GDN+  QLG  T      P
Sbjct: 513 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 541



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 291 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 349

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV +A  +G +  L 
Sbjct: 350 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDVACGSGDAQTLC 408

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 409 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 466

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 467 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 526

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 527 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 564



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
            ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 289 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 347

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
              H+A V  +G ++T G       GH D+   + +P+LVEAL+G     V   +G   T
Sbjct: 348 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDVACGSGDAQT 406

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 407 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 465

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 466 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 523

Query: 350 KGYCGALGHG 359
               G LG G
Sbjct: 524 DNDEGQLGDG 533



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 256

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 257 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 316

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 317 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 376

Query: 413 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
              S+  L+P+++++L+ H V  ++  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 377 ---SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 433

Query: 471 CLEPTEI 477
           C  P +I
Sbjct: 434 CKVPMKI 440



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 401 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 459

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 460 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 518

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 519 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 564



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           D+ +++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 191 DDWILSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 250

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 251 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 307

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            ++ +G+ E  +LGH     C  P  I
Sbjct: 308 EVYSWGEAEDGKLGHGNRSPCDRPRVI 334


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 130  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 4236 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4294

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
              S    G    +     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4295 YGSGGRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4353

Query: 248  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            +LGHG+ +    PK +  L  + +V  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4354 KLGHGNRMSYDRPKLVEHLNGM-NVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4412

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             D+L+P+ ++         +   +GD   + ++    V++WG G  G LG G      LP
Sbjct: 4413 EDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLP 4472

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4473 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4529

Query: 428  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4530 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4576



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 152/323 (47%), Gaps = 16/323 (4%)

Query: 129  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 185
            N  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3146 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3203

Query: 186  FTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            F+ G+      GH   NR    +PRLVE L+    + V  G + +  ++ +G ++T G  
Sbjct: 3204 FSWGEGEDGKLGH--GNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLG 3261

Query: 245  THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCL 302
             +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    L
Sbjct: 3262 EYGRLGHGDNSTQLKPKLVAALAG-RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3320

Query: 303  GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
            G G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG + 
Sbjct: 3321 GRGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3378

Query: 363  DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
                P+P++ L+    + V         + D G VY +G    G  G  +  V+ K   P
Sbjct: 3379 HVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK---P 3435

Query: 423  RILDSLRAHHVSQISTGLYHTVV 445
             ++  L A  V++++ G  H++ 
Sbjct: 3436 ALVIGLDAVFVNRVACGSSHSIA 3458



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 4326 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMNVADIACG 4383

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T  GHV T G   +G+LGHGD+ D+  P+ +  L    ++ +   +G +  L 
Sbjct: 4384 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLC 4443

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +  +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4444 INDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4501

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 4502 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4561

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4562 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4601



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 17/294 (5%)

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 234
             V Q+G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 3142 IVGQNGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 3199

Query: 235  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 3200 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVETLRSKKIRDVACGSSHSAAISSQGELY 3256

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 350
            ++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG 
Sbjct: 3257 TWGLGEYGRLGHGDNSTQLKPKLVAAL--AGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3314

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG 
Sbjct: 3315 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3373

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3374 --HGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3425



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 129/285 (45%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L +   V++ G    G LGHG      +S+ R   +   +  +V  
Sbjct: 4324 KKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMNVAD 4379

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G   
Sbjct: 4380 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPQLVEALLGYRAIDIACGSGD 4438

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T
Sbjct: 4439 AQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALT 4497

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VY
Sbjct: 4498 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVY 4555

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4556 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4600



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 7/263 (2%)

Query: 203 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTP 260
           +P   P+L+E +       + +      F+ I    + ++ G+    +LGHGDT  R  P
Sbjct: 604 KPETEPQLLEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVP 663

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
             I  L+    V  +  G SY  A+T +G +Y++G G+   LGHG   D+  P  +    
Sbjct: 664 TKITLLDRC--VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALT 721

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
              I  V + +GD H + L S G+VY WG    G LG+G+      P  + SL      +
Sbjct: 722 EHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPK--VQR 779

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
           V A  + +  L   G +Y +G          +R  +     PR++  L+   +  ++ G+
Sbjct: 780 VFAGAQFSMALTTDGQLYSWGKASCLGHQLVERS-AQWCSVPRLISGLQHKRIVDVAVGV 838

Query: 441 YHTVVVTDRGRLFGFGDNERAQL 463
            H + ++  G +FG+G N+  Q+
Sbjct: 839 AHCLALSSCGEVFGWGRNDSQQI 861



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V  NG VY+ 
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVGQNGKVYAC 3152

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3153 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3212

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+      P  + +L+S     V      +  +   G +Y +G   +G LG  D  
Sbjct: 3213 KLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNS 3272

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3273 TQ---LKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3329

Query: 473  EPTEI 477
             P EI
Sbjct: 3330 TPHEI 3334



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 16/258 (6%)

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 281
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 4229 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4280

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4281 LFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4340

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 4341 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWG 4400

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ + D   ++ +GD +
Sbjct: 4401 KGRYGRLGHGD---SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGD 4457

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LG     GC  P +I
Sbjct: 4458 YGKLGRGGSDGCKLPYKI 4475



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 16/220 (7%)

Query: 260 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           P S+  L     V QI    S +L ++ +G +Y++     F         E +P+ ++  
Sbjct: 566 PSSLPLLNCKFQVQQIVCSESIVLILSEDGKLYNW---RMF-------KPETEPQLLEEI 615

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
             + I  +       H +A+D +   Y+WG G    LGHGD   + +P  ++ L   +  
Sbjct: 616 AHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITLLDRCVKA 675

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS-- 437
             C       +   +G++Y +G   +  LG    G SD    P ++ +L  H +  ++  
Sbjct: 676 VFCGCSYSAAITC-SGNLYTWGRGTYARLG---HGNSDDQPLPTVVMALTEHEIIDVALG 731

Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +G  H++ +T  G ++ +GD +  +LG+  L G + P  +
Sbjct: 732 SGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLV 771



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 4226 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4285

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G ++     G+GS G    G +D    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4286 PDGKLFA---TGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4342

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+ E  +LGH
Sbjct: 4343 EVYAWGEGEDGKLGH 4357


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 139/281 (49%), Gaps = 9/281 (3%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 391 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 449

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
             +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 450 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 508

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 509 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 566

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 567 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 626

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            G LG    G ++ + RPR++ +L+   V++++ G  HT+ 
Sbjct: 627 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 664



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 377 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 436

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
           L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 437 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 495

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 496 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 555

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
           + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 556 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 612

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            T+ G ++ +GDN+  QLG  T      P
Sbjct: 613 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 641



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
            ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 389 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 447

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
              H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 448 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 506

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 507 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 565

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 566 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 623

Query: 350 KGYCGALGHG 359
               G LG G
Sbjct: 624 DNDEGQLGDG 633



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 301 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 356

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 357 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 416

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 417 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 476

Query: 413 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
              S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 477 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 533

Query: 471 CLEPTEI 477
           C  P +I
Sbjct: 534 CKVPMKI 540



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 501 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 559

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 560 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 618

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 619 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 664



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 291 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 350

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
             G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 351 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 407

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            ++ +G+ E  +LGH     C  P  I
Sbjct: 408 EVYSWGEAEDGKLGHGNRSPCDRPRVI 434


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3789 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3847

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3848 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 3906

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 3907 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 3964

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 3965 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4024

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4025 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4061



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3775 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3834

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3835 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3893

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 3894 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 3953

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 3954 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4010

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4011 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4039



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 159/332 (47%), Gaps = 24/332 (7%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCC---GHRDTNRPIFRPR-LVEALKGV 217
            SA +VVQV+        V   G+V+ CG+ + +     G      PI  P   + AL   
Sbjct: 2741 SALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPI--PHGXITALSSY 2798

Query: 218  PCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
              K+V   +G + TGF  + G V + G    G+LGH   +    P+ I  L+    +  I
Sbjct: 2799 VVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM----PRLIEALK-TKRIRDI 2853

Query: 276  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--D 333
            A G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D
Sbjct: 2854 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRD 2911

Query: 334  EHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLV 392
               +AL   G V++ G G    +G G E+    +P+ +  L      Q+    + +  L 
Sbjct: 2912 AQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALT 2971

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS-TGLYHTVVVTDRGR 451
             +G V+ +G   +  LG    G    V +P++++ LR   +   S +G  H + VTD G+
Sbjct: 2972 KSGVVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQ 3028

Query: 452  LFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
            ++ +GDN+  Q G+ T     +PT   +Q +E
Sbjct: 3029 VYAWGDNDHGQQGNGTTTVNRKPT--LVQGLE 3058



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 3787 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 3845

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 3846 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 3904

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 3905 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 3963

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 3964 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4021

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4022 DNDEGQLGDG 4031



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 3754

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3755 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3814

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3815 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 3874

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P+++++L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 3875 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 3931

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 3932 CKVPMKI 3938



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +    +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 6/225 (2%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  H+  L S+  +++ G    G LGHG  TTQ +    +       V+QV+     
Sbjct: 2853 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 2911

Query: 176  AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            A    +   G VF+ GD   +  G     +    P+ +E L G    Q+  G  F+  LT
Sbjct: 2912 AQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALT 2971

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G   + +LGHG  +    P+ +  L     V    +G  + LAVT +G VY+
Sbjct: 2972 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYA 3031

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            +G   +   G+G      +P  +Q    +G  + RV+ G  H VA
Sbjct: 3032 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3074



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 3899 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 3957

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 3958 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4016

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4017 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4062



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 9/159 (5%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
            VFS G      +G GPE   C     I   +   V Q+      +  + +SG V+T G  
Sbjct: 2923 VFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 2982

Query: 192  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA----GLNFTGFLTIRGHVHTCGSNTHG 247
              F  GH  ++  + +P++VE L+G   K++ A    G      +T  G V+  G N HG
Sbjct: 2983 DYFRLGH-GSDVHVRKPQVVEGLRG---KKIVACSCSGALHCLAVTDSGQVYAWGDNDHG 3038

Query: 248  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
            Q G+G T     P  +  LE    + ++A G S+ +A T
Sbjct: 3039 QQGNGTTTVNRKPTLVQGLEG-QKITRVACGSSHSVAWT 3076



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F + 
Sbjct: 3689 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3748

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3749 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3805

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3806 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3832


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 153/317 (48%), Gaps = 11/317 (3%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            SA   VQ+   E     V   G+V+  G  +    G   T+  I  P L+E+++ +  K+
Sbjct: 3999 SALRPVQLVGGEQTLLAVTSDGKVYATGYGAGGRLGLGGTDT-ILTPTLLESIQHIFIKK 4057

Query: 222  V--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
            V   +G      L+  G V++ G    G+LGHG+      P+ I  L+    +V IA G 
Sbjct: 4058 VAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQG-KEIVDIACGG 4116

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVV 337
            ++  AVT  G +Y++G G    LGHG+  D+++P+ ++T    G  V+ ++  +GD   +
Sbjct: 4117 AHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETL--IGFKVIDIACGSGDAQTL 4174

Query: 338  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
             +     V++WG G  G LG G      +P  + SL     V+V    + +  L  +GSV
Sbjct: 4175 CITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSV 4234

Query: 398  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
            Y +G   +  LG    G  + V  P+ + +L+   +  I+TG  H V  +D G +F +GD
Sbjct: 4235 YTWGKGDYHRLG---HGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGD 4291

Query: 458  NERAQLGHDTLRGCLEP 474
            N+  QLG  T+     P
Sbjct: 4292 NDEGQLGDGTMNAIHRP 4308



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 158/327 (48%), Gaps = 10/327 (3%)

Query: 153  VSFTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            VSF   ++     V  +S + +H+     S  +VF  G N     G    ++ +  P   
Sbjct: 2954 VSFLATDYEEIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLGGLKGSK-VKVPVYS 3012

Query: 212  EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE-VG 270
            E+L  +    +  G      ++  G ++ CG  T+G+LG G + +  TP  +  L + V 
Sbjct: 3013 ESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVI 3072

Query: 271  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
              V + +G  + +A+T +G V+S+G G +  LGH  +    +P+ I+  + K I    ++
Sbjct: 3073 KKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIR--DIA 3130

Query: 331  AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKT 388
             G  H  A+ S+G ++TWG G  G LGHGD + +  P+ + +L  H  VQV   +R  +T
Sbjct: 3131 CGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQT 3190

Query: 389  FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
              L   G V+ +G   FG LG   RG S+    P  ++ L    V  I  G   ++ +T 
Sbjct: 3191 LALSAEGLVFSWGDGDFGKLG---RGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTK 3247

Query: 449  RGRLFGFGDNERAQLGHDTLRGCLEPT 475
             G+++ +G  +  +LGH + +   +PT
Sbjct: 3248 FGQVYTWGKGDYFRLGHGSDQHVRKPT 3274



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 150/323 (46%), Gaps = 15/323 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            +A   + ++        V   G+++ CG+  N     GH +    +  P  + +L     
Sbjct: 3016 TALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNN---VATPCQLTSLNQYVI 3072

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            K+V   +G      LT+ G V + G    G+LGH + L    PK I  L+    +  IA 
Sbjct: 3073 KKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKS-KRIRDIAC 3131

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
            G S+  A++  G ++++G G    LGHG+   +L+P+ ++     G H+V+V+ G  D  
Sbjct: 3132 GSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALL--GHHIVQVACGSRDAQ 3189

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             +AL + G V++WG G  G LG G      +P  +  L       +    + +  L   G
Sbjct: 3190 TLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFG 3249

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY +G   +  LG    G    V +P +++SL    +  ++ G  H +  TD+G+++ +
Sbjct: 3250 QVYTWGKGDYFRLG---HGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAW 3306

Query: 456  GDNERAQLGHDTLRGCLEPTEIF 478
            GDN+  Q G+ T+    +P+ + 
Sbjct: 3307 GDNDHGQQGNGTILVNRKPSLVL 3329



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 156/341 (45%), Gaps = 27/341 (7%)

Query: 138 SLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 197
           S C  LG  P++  C S   +       V Q+  +E     +  +G+V+    +S   C 
Sbjct: 459 SSCHDLGTSPQS--CDSIRELG------VKQIVCAERWLLILTLTGKVYIMYYSSETQC- 509

Query: 198 HRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTL 255
                     P  +E   G    ++ A  +   +  L+  G V++ G+   G+LGHGD  
Sbjct: 510 ----------PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNN 559

Query: 256 DRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 314
            R  P  I  L  VG +V+ I+ G +Y  AVT +G VY++G G+   LGHG   D   P 
Sbjct: 560 SRDQPTKITEL--VGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPT 617

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            +   +   I  +   +GD   +A+ ++G V++WG G  G LG G       P+ +  L+
Sbjct: 618 LVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQ 677

Query: 375 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
                +V    + +  L  +GSVY +G      LG    G  + V  P++++ L    + 
Sbjct: 678 DIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLG---HGSENHVRFPKLVEGLNGKCIK 734

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           +++ G  H + +TD G ++G+G N+  Q+G  +     EPT
Sbjct: 735 KVAVGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPT 775



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 6/244 (2%)

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G ++  G N  GQLG  +      P S   L  +  V Q+  G   +LAVT +G VY+ G
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPV-QLVGGEQTLLAVTSDGKVYATG 4026

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+   LG G     L P  +++ +   I  V V++G +H +AL + G VY+WG+G  G 
Sbjct: 4027 YGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGK 4086

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG++     P+ + +L+    V +      +  +   G +Y +G   +G LG    G 
Sbjct: 4087 LGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLG---HGD 4143

Query: 416  SDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            S+  ++P+++++L    V  I+  +G   T+ +TD   ++ +GD +  +LG     GC  
Sbjct: 4144 SEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKI 4203

Query: 474  PTEI 477
            P +I
Sbjct: 4204 PMKI 4207



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 114/249 (45%), Gaps = 8/249 (3%)

Query: 114  QMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
            ++ + +G  H L +S +  V+S G    G LGHG     C     I+      +V ++  
Sbjct: 4057 KVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHG-NKNGCDHPQLIDALQGKEIVDIACG 4115

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
              H+A V   G+++T G       GH D+   + +P+LVE L G     +  G      L
Sbjct: 4116 GAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQM-KPKLVETLIGFKVIDIACGSGDAQTL 4174

Query: 233  TI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G 
Sbjct: 4175 CITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLG-VVKVECGSQFSVALTRSGS 4233

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            VY++G G    LGHG       P+ I     +G  ++ ++ G  H VA    G V+TWG 
Sbjct: 4234 VYTWGKGDYHRLGHGSDEHVRHPKKIAAL--QGKKIICIATGSLHCVACSDLGEVFTWGD 4291

Query: 351  GYCGALGHG 359
               G LG G
Sbjct: 4292 NDEGQLGDG 4300



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 110/249 (44%), Gaps = 21/249 (8%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSAS 172
            G++   L  +  VFS G    G LGH        P+  + +   RI          ++  
Sbjct: 3081 GKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIR--------DIACG 3132

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF--TG 230
             +H+A +  +G++FT G       GH D N    RP+LV+AL G    QV  G     T 
Sbjct: 3133 SSHSAAISSTGELFTWGLGEYGRLGHGD-NLTQLRPKLVKALLGHHIVQVACGSRDAQTL 3191

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             L+  G V + G    G+LG G +     P +I  L  +G V  I  G  + LA+T  G 
Sbjct: 3192 ALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLG-VCMIECGAQFSLALTKFGQ 3250

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            VY++G G  F LGHG      +P  +++   K I  V V+ G  H +     G VY WG 
Sbjct: 3251 VYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKI--VHVAVGALHCLCATDQGQVYAWGD 3308

Query: 351  GYCGALGHG 359
               G  G+G
Sbjct: 3309 NDHGQQGNG 3317



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 131/285 (45%), Gaps = 18/285 (6%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G++   L  +  V+S G+   G LGHG   ++    T+I      +V+ +S    ++A V
Sbjct: 530 GKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQP-TKITELVGKNVIHISCGATYSAAV 588

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GH 237
             SG+V+T G  +    GH  T+     P LV  LK      +  G      L +   G 
Sbjct: 589 TSSGEVYTWGRGNYGRLGH-GTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGL 647

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V + G   +G+LG G +    TPK I  L+++  V ++  G  + LA+T +G VY++G G
Sbjct: 648 VFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDI-EVARVYCGSQFSLALTKSGSVYTWGKG 706

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
            N  LGHG ++    P+ ++    K I  V V +G  HV+AL   G VY WG+   G +G
Sbjct: 707 DNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG--HVLALTDDGEVYGWGRNDNGQVG 764

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
              E + + P  L+ L+            K  V +D G      W
Sbjct: 765 ETSETNVSEPTLLTLLQG-----------KNIVDIDCGPNQSIAW 798



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 3/155 (1%)

Query: 132  VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
            VFS G    G LG G  +  C     I   +   V  +      +  + + GQV+T G  
Sbjct: 3199 VFSWGDGDFGKLGRGG-SEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKG 3257

Query: 192  SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
              F  GH  +++ + +P LVE+L       V  G       T +G V+  G N HGQ G+
Sbjct: 3258 DYFRLGH-GSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGN 3316

Query: 252  GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
            G  L    P  +  LE V  V ++A G S+ +A T
Sbjct: 3317 GTILVNRKPSLVLNLEGV-RVNRVACGSSHSIAWT 3350



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 5/138 (3%)

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            SG +Y WG  + G LG  +     +P    +L +   VQ+   ++    +   G VY   
Sbjct: 3967 SGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYA-- 4024

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
              G+G+ G    G +D +L P +L+S++   + +++  +G  H + ++  G+++ +G+ +
Sbjct: 4025 -TGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGD 4083

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LGH    GC  P  I
Sbjct: 4084 DGKLGHGNKNGCDHPQLI 4101


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 166/340 (48%), Gaps = 21/340 (6%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 172
           Q+  G++ T LI S+ +V +CG    G LG G ++  C S  +       +V ++S+S  
Sbjct: 432 QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLG-DSNNC-SVPKKPLFDKKYVKKISSSKG 489

Query: 173 -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTG 230
            + H+  +  +G+V++ GD      GH  T+     P+LV+  L G   K V+AG   + 
Sbjct: 490 SDGHSLALTTTGEVYSWGDGDYGKLGH-GTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSA 548

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG- 289
            +T  G ++T G    G+LGH  T  +  P  +  +E VG V   A G S+ LAV+ +G 
Sbjct: 549 AVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGLV---ACGGSHTLAVSQDGK 605

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            ++SFG G N  LGHG+ + +L+P+ I+     G+++ +V+ G +  +A+ SSG +Y WG
Sbjct: 606 TIWSFGGGENGKLGHGDTNRQLKPKVIEALN--GLYIRKVACGSQSSLAVTSSGQLYAWG 663

Query: 350 KGYCGA-LGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
              CGA LG G  E     P  +  L+S   V +         L     VY +G    G 
Sbjct: 664 ---CGAILGCGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQ 720

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G         + RP+ +  L    V Q+S G  H+V  T
Sbjct: 721 CG--QGHAQSPITRPKRVIGLDGVSVHQVSAGTSHSVAWT 758



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 139/293 (47%), Gaps = 19/293 (6%)

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGL 226
           S S ++A      G+V+  G N    C H+        I  P+         C+QV AG 
Sbjct: 384 STSHSNANLSGSCGEVYVWGSN----CTHQLAEGGQEKITTPKYSAVF--TDCQQVEAGQ 437

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS---YML 283
             T  +   G V  CG  ++G+LG GD+ +   PK   PL +   V +I++      + L
Sbjct: 438 FCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKK--PLFDKKYVKKISSSKGSDGHSL 495

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           A+T  G VYS+G G    LGHG    +  P+ ++     G  V  VSAG  H  A+   G
Sbjct: 496 ALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKG-PLVGKVVKCVSAGYRHSAAVTEDG 554

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            +YTWG G  G LGH     K  P  + S++S + +  C       V  D  +++ FG  
Sbjct: 555 ELYTWGDGEFGRLGHDYTSSKNFPTKVQSIES-VGLVACGGSHTLAVSQDGKTIWSFGGG 613

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
             G LG  D   +++ L+P+++++L   ++ +++ G   ++ VT  G+L+ +G
Sbjct: 614 ENGKLGHGD---TNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWG 663



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 145/310 (46%), Gaps = 30/310 (9%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQ 221
           QV A +     +   G V  CG  S    G  D+N      +P+F  + V   K +   +
Sbjct: 432 QVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYV---KKISSSK 488

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IAAGP 279
            + G +    LT  G V++ G   +G+LGHG    +  PK +  PL  VG VV+ ++AG 
Sbjct: 489 GSDGHSLA--LTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPL--VGKVVKCVSAGY 544

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            +  AVT +G +Y++G G    LGH     +  P  +Q+    G+    V+ G  H +A+
Sbjct: 545 RHSAAVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL----VACGGSHTLAV 600

Query: 340 DSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
              G  ++++G G  G LGHGD   +  P+ + +L      +V    + +  +  +G +Y
Sbjct: 601 SQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLY 660

Query: 399 GFGW---MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            +G    +G GS  +         LRPR+++ L++  +  I+ G  H + +T    ++ +
Sbjct: 661 AWGCGAILGCGSAEY-------TALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAW 713

Query: 456 GDNERAQLGH 465
           G+N   Q G 
Sbjct: 714 GNNAMGQCGQ 723



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 132/308 (42%), Gaps = 33/308 (10%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFL 232
           +AA +L     F   D +S CC   D N                C   T+    N +G  
Sbjct: 353 YAAVILLEELYFLASDYASNCCSGPDEN----------------CNNSTSHSNANLSGSC 396

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V+  GSN   QL  G      TPK  A   +     Q+ AG      +  +G V 
Sbjct: 397 ---GEVYVWGSNCTHQLAEGGQEKITTPKYSAVFTDCQ---QVEAGQFCTFLIYSDGTVG 450

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKG 351
           + G GS   LG G+ ++   P+    F +K +  +  S G D H +AL ++G VY+WG G
Sbjct: 451 ACGKGSYGRLGLGDSNNCSVPKK-PLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDG 509

Query: 352 YCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
             G LGHG    + +P+ +   L   +   V A  R +  + + G +Y +G   FG LG 
Sbjct: 510 DYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGH 569

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLGHDTLR 469
            D   S     P  + S+ +  V  ++ G  HT+ V+  G+ ++ FG  E  +LGH    
Sbjct: 570 -DYTSSKNF--PTKVQSIES--VGLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTN 624

Query: 470 GCLEPTEI 477
             L+P  I
Sbjct: 625 RQLKPKVI 632


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 145/323 (44%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H A V + G+VFT G+ S    GH         PRLVE L       V  G
Sbjct: 267 VQQIACGVRHVALVTRQGEVFTWGEESGGRLGH-GFETDFSCPRLVEFLAVTNVDFVACG 325

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++T G  T   G LG G  +    PK ++ PLE +  V  IA G  + 
Sbjct: 326 EYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGL-QVFSIACGTWHS 384

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 340
              T NG +++FG G+   LGHG++     P+ +Q     G+  ++V+ G  H  A+   
Sbjct: 385 ALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLL--SGLKTIKVACGVWHTAAIVEV 442

Query: 341 --------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SS  ++TWG G    LGHG +    LP  +SSL  +   Q+   +  T  L 
Sbjct: 443 MSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALT 502

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G    G LG P    SD  +   + DSL    V ++S G +H  V+T R  L
Sbjct: 503 TSGHVFTMGGTAHGQLGNP---ASDGKMPTLVQDSLVGEFVEEVSCGAHHVAVLTSRSEL 559

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH        PT
Sbjct: 560 YTWGKGANGRLGHGDTEDRRTPT 582



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 14/281 (4%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  P+ +E+   +  +Q+  G+     +T +G V T G  + G+LGHG   D   P+ + 
Sbjct: 253 VLTPKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVE 312

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  V +V  +A G  +  AVT +G +Y++G G+     LG G       P+ + +   +
Sbjct: 313 FL-AVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRV-SGPLE 370

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V  ++ G  H     S+G ++T+G G  G LGHGD    + P+ +  L     ++V 
Sbjct: 371 GLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVA 430

Query: 383 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
                T  +V+  S  G        F W G G       G  D  L P  + SL  ++  
Sbjct: 431 CGVWHTAAIVEVMSQSGANVSSRKLFTW-GDGDKNRLGHGSKDTYLLPTCVSSLIDYNFH 489

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           QI+ G   TV +T  G +F  G     QLG+    G + PT
Sbjct: 490 QIACGQTLTVALTTSGHVFTMGGTAHGQLGNPASDGKM-PT 529



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  ++ S     +  G+   G+LG G + +  +   R++ P     V  ++  
Sbjct: 322 VACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIP-KRVSGPLEGLQVFSIACG 380

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 225
             H+A    +G++FT GD +    GH D     F P+ V+ L G+   +V  G       
Sbjct: 381 TWHSALATSNGKLFTFGDGAFGVLGHGDRESLSF-PKEVQLLSGLKTIKVACGVWHTAAI 439

Query: 226 ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
              ++ +G       + T G     +LGHG       P  ++ L +  +  QIA G +  
Sbjct: 440 VEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDY-NFHQIACGQTLT 498

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+T +G V++ G  ++  LG+    D   P  +Q     G  V  VS G  HV  L S 
Sbjct: 499 VALTTSGHVFTMGGTAHGQLGN-PASDGKMPTLVQD-SLVGEFVEEVSCGAHHVAVLTSR 556

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             +YTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 557 SELYTWGKGANGRLGHGDTEDRRTPTLVEALK 588



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 110/238 (46%), Gaps = 24/238 (10%)

Query: 117 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           I  G +H+ L  SN  +F+ G    GVLGHG    + +SF + +   S    ++V+    
Sbjct: 377 IACGTWHSALATSNGKLFTFGDGAFGVLGHGDR--ESLSFPKEVQLLSGLKTIKVACGVW 434

Query: 175 HAAFVL----QSG------QVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQV 222
           H A ++    QSG      ++FT GD      GH  +DT      P  V +L      Q+
Sbjct: 435 HTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDT---YLLPTCVSSLIDYNFHQI 491

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 281
             G   T  LT  GHV T G   HGQLG+  + D   P ++     VG  V+ ++ G  +
Sbjct: 492 ACGQTLTVALTTSGHVFTMGGTAHGQLGNPAS-DGKMP-TLVQDSLVGEFVEEVSCGAHH 549

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           +  +T    +Y++G G+N  LGHG+  D   P  ++  + +  HV  +S G     ++
Sbjct: 550 VAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDR--HVKNISCGSNFTTSI 605



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  Y+     +  V+  GS S+  +    ++D L P+ +++     + V +++ G  HV 
Sbjct: 225 GDVYLWGEVWSDAVFPDGSMSSVPI----KNDVLTPKPLES--NVVLDVQQIACGVRHVA 278

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            +   G V+TWG+   G LGHG E D + P  +  L       V   +  T  +  +G +
Sbjct: 279 LVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGEYHTCAVTTSGDL 338

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           Y +G  G  + G   +G       P R+   L    V  I+ G +H+ + T  G+LF FG
Sbjct: 339 YTWG-DGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHSALATSNGKLFTFG 397

Query: 457 DNERAQLGHDTLRGCLEPTEI 477
           D     LGH        P E+
Sbjct: 398 DGAFGVLGHGDRESLSFPKEV 418



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 24/187 (12%)

Query: 115 MQITTGRYHTLLI-----------SNSSVFSCGSSLCGVLGHGPETT----QCVSFTRIN 159
           +++  G +HT  I           S+  +F+ G      LGHG + T     CVS + I+
Sbjct: 427 IKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVS-SLID 485

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVP 218
           +    +  Q++  +     +  SG VFT G  +    G+  ++  +  P LV+ +L G  
Sbjct: 486 Y----NFHQIACGQTLTVALTTSGHVFTMGGTAHGQLGNPASDGKM--PTLVQDSLVGEF 539

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
            ++V+ G +    LT R  ++T G   +G+LGHGDT DR TP  +  L++   V  I+ G
Sbjct: 540 VEEVSCGAHHVAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDR-HVKNISCG 598

Query: 279 PSYMLAV 285
            ++  ++
Sbjct: 599 SNFTTSI 605


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 150/315 (47%), Gaps = 22/315 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G+VF+ G+      GH   +  +  P+ V+ LK    + V  G
Sbjct: 307 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGH-GVDSDVSHPKFVDGLKNFNVELVACG 365

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
              +  +T+ G ++  G N +  G LG G    +  P+ +  PLE +  V  ++ GP + 
Sbjct: 366 EYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGI-HVSSVSCGPWHT 424

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             VT  G +++FG G+   LGHG++     PR +++   KG+  +R + G  H  A+   
Sbjct: 425 AVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESL--KGLRTMRAACGVWHTAAVVEI 482

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G    LGHGD+  + +P  +++L      QV      T  
Sbjct: 483 MVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEPNFCQVACGHSLTAA 542

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  TG VY  G   +G LG P    +D +L  R+   L  + V +++ G YH  V+T R 
Sbjct: 543 LTTTGQVYTMGSPVYGQLGNPQ---ADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRT 599

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G     +LGH
Sbjct: 600 EVYTWGKGANGRLGH 614



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 127/274 (46%), Gaps = 21/274 (7%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YH+  ++ S    ++   +   G+LG G E TQ V   +++ P    HV  VS  
Sbjct: 362 VACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVP-RKLDGPLEGIHVSSVSCG 420

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H A V  +GQ+FT GD +    GH D    +  PR VE+LKG+   +   G+  T  +
Sbjct: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGD-RISVSIPREVESLKGLRTMRAACGVWHTAAV 479

Query: 233 T------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
                          G + T G     +LGHGD   R  P  +A L E  +  Q+A G S
Sbjct: 480 VEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEP-NFCQVACGHS 538

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
              A+T  G VY+ GS     LG+  Q D + P  ++    K   V  ++ G  HV  L 
Sbjct: 539 LTAALTTTGQVYTMGSPVYGQLGN-PQADGMLPTRVEGKLMKNF-VEELACGAYHVAVLT 596

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S   VYTWGKG  G LGHGD  D+  P  + +LK
Sbjct: 597 SRTEVYTWGKGANGRLGHGDADDRNSPSVVEALK 630



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 151/354 (42%), Gaps = 40/354 (11%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAHVVQVS 170
           I  GR H  L++    VFS G  L G LGHG ++   VS  +      NF    +V  V+
Sbjct: 310 IACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSD--VSHPKFVDGLKNF----NVELVA 363

Query: 171 ASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAG 225
             E H+  V  SG ++  G N+       CG   T    + PR ++  L+G+    V+ G
Sbjct: 364 CGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQ---WVPRKLDGPLEGIHVSSVSCG 420

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE------------EVGSVV 273
              T  +T  G + T G  T G LGHGD +    P+ +  L+               +VV
Sbjct: 421 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHTAAVV 480

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
           +I  G S   +   +G ++++G G    LGHG++   L P  + T      +  +V+ G 
Sbjct: 481 EIMVG-SSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEP--NFCQVACGH 537

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLV 392
               AL ++G VYT G    G LG+  + D  LP  +   L  +   ++        VL 
Sbjct: 538 SLTAALTTTGQVYTMGSPVYGQLGN-PQADGMLPTRVEGKLMKNFVEELACGAYHVAVLT 596

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
               VY +G    G LG  D   +D    P ++++L+   V  I  G   T  +
Sbjct: 597 SRTEVYTWGKGANGRLGHGD---ADDRNSPSVVEALKDKQVKGIVCGTSFTAAI 647



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 27/298 (9%)

Query: 206 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           F P+ +E+   +  + +  G      +T +G V + G    G+LGHG   D   PK +  
Sbjct: 294 FVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDG 353

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS-NF-CLGHGEQHDELQPRAIQTFRRKG 323
           L+   +V  +A G  +  AVT +G +Y +G  + NF  LG G +  +  PR +     +G
Sbjct: 354 LKNF-NVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDG-PLEG 411

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           IHV  VS G  H   + S+G ++T+G G  G LGHGD I  ++P  + SLK    ++   
Sbjct: 412 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAAC 471

Query: 384 RKRKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
               T  +V+            +G ++ +G      LG  D+   +  L P  + +L   
Sbjct: 472 GVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDK---EARLVPTCVATLVEP 528

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 482
           +  Q++ G   T  +T  G+++  G     QLG+    G L PT +       F++E+
Sbjct: 529 NFCQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGML-PTRVEGKLMKNFVEEL 585



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 14/129 (10%)

Query: 340 DSSGYVYTWGKGYCGAL---------GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           D+ G VY WG+G    +         G G ++D  +P+ L S    L VQ  A  R+   
Sbjct: 260 DALGDVYIWGEGTGDGILGGGVHRIGGSGVQMDSFVPKALES-AVLLDVQAIACGRQHAA 318

Query: 391 LV-DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
           LV   G V+ +G    G LG    GV   V  P+ +D L+  +V  ++ G YH+  VT  
Sbjct: 319 LVTKQGEVFSWGEELGGRLGH---GVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVTLS 375

Query: 450 GRLFGFGDN 458
           G L+ +G N
Sbjct: 376 GDLYIWGGN 384


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 146/306 (47%), Gaps = 25/306 (8%)

Query: 189 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
           G + S   G   T   +  P  + AL+      V+AG + +  LT  G V + G+  HG+
Sbjct: 11  GQHGSLGQGDAVTQLSVLTP--IRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGR 68

Query: 249 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
           LGHG+      P+ IA  +    V +I+AG ++ LA+T +G  YSFG G    LGHG++ 
Sbjct: 69  LGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDET 128

Query: 309 DELQPRAIQTFRRKGIH---------------VVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           D+L PR I T R  G                 +  V+AG  H + L + G VY++G G  
Sbjct: 129 DQLLPREI-TLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVM 187

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           GALGHGD   +  P  + +L     V +      T VL D G V+ FG + +        
Sbjct: 188 GALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFG-LDYSEFPKFTE 246

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL--FGFGDNERAQLGHDTLRGC 471
           G +  VL P  L    A  ++++  G  H +++T  G+L  FG G N R  LG +T R  
Sbjct: 247 GQARFVLLPSALG--LAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDETNR-- 302

Query: 472 LEPTEI 477
           L PT +
Sbjct: 303 LAPTAV 308



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           +RG V + G   HG LG GD + + +  +     E   VV ++AG  + L +T  G V+S
Sbjct: 1   MRGVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFS 60

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           FG+G +  LGHG +    +PR I  F      V ++SAG  H +AL   G  Y++G G  
Sbjct: 61  FGNGLHGRLGHGNEETCFEPRRIAFFDTTA-GVAKISAGTTHSLALTKDGKAYSFGFGMF 119

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAV-----------------QVCARKRKTFVLVDTGS 396
           G LGHGDE D+ LP  + +L+ H A                   V A    + +L   G 
Sbjct: 120 GRLGHGDETDQLLPREI-TLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGR 178

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           VY FG    G+LG  DR   DK LRP ++++L    +  ++ G  +T+V+ D GR+F FG
Sbjct: 179 VYSFGAGVMGALGHGDR---DKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFG 235



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 156/371 (42%), Gaps = 37/371 (9%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V S G    G LG G   TQ    T I    A  VV VSA  +H+  + + G+VF+ G+ 
Sbjct: 5   VLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNG 64

Query: 192 SSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
                GH +     F PR +   +   GV   +++AG   +  LT  G  ++ G    G+
Sbjct: 65  LHGRLGHGN-EETCFEPRRIAFFDTTAGV--AKISAGTTHSLALTKDGKAYSFGFGMFGR 121

Query: 249 LGHGDTLDRPTPKSIA--------PL------EEVGSVVQ-IAAGPSYMLAVTGNGVVYS 293
           LGHGD  D+  P+ I         P+       E   V++ +AAG  + L +T +G VYS
Sbjct: 122 LGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYS 181

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           FG+G    LGHG++   L+P  I+    +   +V ++ G  + + LD  G V+ +G  Y 
Sbjct: 182 FGAGVMGALGHGDRDKRLRPTMIEALADR--RIVSMACGSANTLVLDDEGRVFFFGLDYS 239

Query: 354 --GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
                  G      LP  L   +     +V A +    +L   G +  FG    G LG  
Sbjct: 240 EFPKFTEGQARFVLLPSALGLAEE--ITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLG 297

Query: 412 DRGVSDKVLRPRILDSLRAHHVS---QISTGLYHTVVVTD----RGRLFGFGDNERAQLG 464
           D       L P  +        S    I+ G  H + + D      RL+ FG  ++ QL 
Sbjct: 298 DE---TNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLA 354

Query: 465 HDTLRGCLEPT 475
           +   +    PT
Sbjct: 355 NGHRQDRASPT 365



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 152/363 (41%), Gaps = 39/363 (10%)

Query: 115 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSAS 172
           + ++ G +H+L+++    VFS G+ L G LGHG E T C    RI  F + A V ++SA 
Sbjct: 40  VAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEET-CFEPRRIAFFDTTAGVAKISAG 98

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTN---------------RPIFRPRLVEALKGV 217
             H+  + + G+ ++ G       GH D                  P    R+ E     
Sbjct: 99  TTHSLALTKDGKAYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDP 158

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
             + V AG   +  LT  G V++ G+   G LGHGD   R  P  I  L +   +V +A 
Sbjct: 159 VIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADR-RIVSMAC 217

Query: 278 GPSYMLAVTGNGVVYSFG-SGSNFC-LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
           G +  L +   G V+ FG   S F     G+    L P A+         +  V AG+ H
Sbjct: 218 GSANTLVLDDEGRVFFFGLDYSEFPKFTEGQARFVLLPSALGLAEE----ITEVRAGEGH 273

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL---SSLKSHLAVQVCARKRKTFVLV 392
            + L   G +  +G G  G LG GDE ++  P  +   S+  + + + +    +    LV
Sbjct: 274 CLLLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALV 333

Query: 393 DTGS----VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA---HHV--SQISTGLYHT 443
           D       +Y FG    G L    R   D+        SL A    H+  + IS G  H+
Sbjct: 334 DVPGEGPRLYAFGSGDQGQLANGHR--QDRASPTATTTSLPALLHQHIVPAAISAGKAHS 391

Query: 444 VVV 446
           +V+
Sbjct: 392 LVL 394



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 3/139 (2%)

Query: 343 GYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G V + G G  G+LG GD + + ++  P+ +L++H  V V A    + VL + G V+ FG
Sbjct: 3   GVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFG 62

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
               G LG  +     +  R    D+     V++IS G  H++ +T  G+ + FG     
Sbjct: 63  NGLHGRLGHGNEETCFEPRRIAFFDTTAG--VAKISAGTTHSLALTKDGKAYSFGFGMFG 120

Query: 462 QLGHDTLRGCLEPTEIFIQ 480
           +LGH      L P EI ++
Sbjct: 121 RLGHGDETDQLLPREITLR 139


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 8/347 (2%)

Query: 130  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            S+++  G +  G LG G E ++  + T     S    +Q++  E     V   G++F  G
Sbjct: 4199 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATG 4257

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
              S    G   ++     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 4258 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDG 4316

Query: 248  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            +LGHG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 4317 KLGHGNRMSYDRPKLLEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4375

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 4376 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4435

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
              + SL     ++V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +
Sbjct: 4436 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4492

Query: 428  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 4493 LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4539



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+V+  G+      GH   NR  + RP+L+E L G+    +  G
Sbjct: 4289 VAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH--GNRMSYDRPKLLEHLNGMSVADIACG 4346

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T  GHV T G   +G+LGHGD+ D+  PK +  L    ++ +   +G +  L 
Sbjct: 4347 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4406

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 4407 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 4464

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG       P+ +++L+    + +           D G VY +G   
Sbjct: 4465 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDND 4524

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 4525 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4564



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 153/322 (47%), Gaps = 14/322 (4%)

Query: 129  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 185
            +  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 3096 DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3153

Query: 186  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
            F+ G+      GH + +  + +PRLVEAL+    + +  G + +  ++ +G ++T G   
Sbjct: 3154 FSWGEGEDGKLGHGNRST-LDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGE 3212

Query: 246  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLG 303
            +G+LGHGD   +  PK +  L     V+Q+A G   +  LA+T +G V+S+G G    LG
Sbjct: 3213 YGRLGHGDNATQLKPKLVTALHG-RRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3271

Query: 304  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
             G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG +  
Sbjct: 3272 RGGSEGSATPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 3329

Query: 364  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
               P+P++ L+    + V         + D G VY +G    G  G  +  V+ K   P 
Sbjct: 3330 VRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK---PA 3386

Query: 424  ILDSLRAHHVSQISTGLYHTVV 445
            ++  L A  V++++ G  H++ 
Sbjct: 3387 LVIGLDAVFVNRVACGSSHSMA 3408



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 138/293 (47%), Gaps = 17/293 (5%)

Query: 179  VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIR 235
            V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+ 
Sbjct: 3093 VSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTLD 3150

Query: 236  GHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            G V + G    G+LGHG+  TLD+P    +        +  IA G S+  A++  G +Y+
Sbjct: 3151 GKVFSWGEGEDGKLGHGNRSTLDKP---RLVEALRAKKIRDIACGSSHSAAISSQGELYT 3207

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKG 351
            +G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG G
Sbjct: 3208 WGLGEYGRLGHGDNATQLKPKLVTALH--GRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3265

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
              G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG  
Sbjct: 3266 DFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG-- 3323

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 3324 -HGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3375



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 125/272 (45%), Gaps = 10/272 (3%)

Query: 100  VEHSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR- 157
            + H   ++      ++ + +G  H L ++ +  VFS G    G LGHG  +T  +   R 
Sbjct: 3120 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRST--LDKPRL 3177

Query: 158  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
            +    A  +  ++   +H+A +   G+++T G       GH D N    +P+LV AL G 
Sbjct: 3178 VEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGD-NATQLKPKLVTALHGR 3236

Query: 218  PCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
               QV  G     T  LT  G V + G    G+LG G +    TP  I  L  +G V+QI
Sbjct: 3237 RVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG-VIQI 3295

Query: 276  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
              G  + LA+T  G V+++G G  + LGHG      +P+ I   R  G  V+ V+ G  H
Sbjct: 3296 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLR--GRRVIHVAVGALH 3353

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             +A+  +G VY WG    G  G G+      P
Sbjct: 3354 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3385



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L ++  V++ G    G LGHG      +S+ R   +   +   V  
Sbjct: 4287 KKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNR----MSYDRPKLLEHLNGMSVAD 4342

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G   
Sbjct: 4343 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGD 4401

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T
Sbjct: 4402 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALT 4460

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   +G VY
Sbjct: 4461 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDAGEVY 4518

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 4519 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4563



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 138/314 (43%), Gaps = 22/314 (7%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            + QV+ SE+    + Q G+++           +    +P   P+L++  +      V+ 
Sbjct: 572 QLKQVACSEDMVVLLCQEGKLY-----------NWPIAKPETEPQLLDFAEIANETFVSI 620

Query: 225 GLNFTG--FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             +  G  FL +  +   ++ G     +LGHGD   R  P  I  L  V  V  +  G S
Sbjct: 621 AAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESL--VRRVQSVYCGCS 678

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           Y  A+T  G +Y++G G+   LGHG   D+  P  +   +   +  V + +GD H + L 
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G VY WG G  G LG+G       P  +  L      +V A  + +  L   G +Y +
Sbjct: 739 RGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPR--VQRVFAGSQFSLALTCEGQLYSW 796

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G          +R V    + PR++ SL+   +  ++ G+ H + ++  G +FG+G N+ 
Sbjct: 797 GKASCLGHQLVERNVQGCSV-PRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDN 855

Query: 461 AQLGHDTLRGCLEP 474
            Q+   ++  C EP
Sbjct: 856 QQICPASV--CSEP 867



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFVVSQDGKVYAC 3102

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 3103 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3162

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+      P  + +L++     +      +  +   G +Y +G   +G LG  D  
Sbjct: 3163 KLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 3222

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 3223 TQ---LKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSA 3279

Query: 473  EPTEI 477
             P EI
Sbjct: 3280 TPHEI 3284



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 281
             L++ G  TI G  H    N  GQLG   G  +  PTP ++++ L  +    Q+A G   
Sbjct: 4192 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPI----QLAGGEQS 4243

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 4244 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4303

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G VY WG+G  G LGHG+ +    P+ L  L       +      +  +  +G V  +G
Sbjct: 4304 DGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWG 4363

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
               +G LG  D   S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 4364 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4420

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LG     GC  P +I
Sbjct: 4421 YGKLGRGGSDGCKLPYKI 4438



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 30/244 (12%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQVSASEN 174
           GR+   + SN + +S G      LGHG        T+  S  R        V  V    +
Sbjct: 626 GRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVR-------RVQSVYCGCS 678

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFL 232
           ++A +   G ++T G  +    GH +++     P +V ALK      V   +G   T  L
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCM-PAMVMALKDHQVLDVALGSGDAHTLCL 737

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGV 290
           T  G V+  G   +G+LG+G         S+ PL  E +  V ++ AG  + LA+T  G 
Sbjct: 738 TRGGLVYAWGDGDYGKLGNGS-----CNSSLQPLLIECLPRVQRVFAGSQFSLALTCEGQ 792

Query: 291 VYSFGSGSNFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
           +YS+G  S  CLGH      +Q    PR I + + K   +V V+ G  H +AL S+G ++
Sbjct: 793 LYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHK--RIVHVAVGVAHCLALSSNGEIF 848

Query: 347 TWGK 350
            WG+
Sbjct: 849 GWGR 852



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 13/184 (7%)

Query: 122 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV-VQVSASENHAAFVL 180
           Y   +    ++++ G    G LGHG    QC+    +       + V + + + H   + 
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           + G V+  GD      G+   N  + +P L+E L  V  ++V AG  F+  LT  G +++
Sbjct: 739 RGGLVYAWGDGDYGKLGNGSCNSSL-QPLLIECLPRV--QRVFAGSQFSLALTCEGQLYS 795

Query: 241 CGSNTHGQLGHGDTLDR-----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G  +   LGH   ++R       P+ I  L+    +V +A G ++ LA++ NG ++ +G
Sbjct: 796 WGKASC--LGH-QLVERNVQGCSVPRLITSLQH-KRIVHVAVGVAHCLALSSNGEIFGWG 851

Query: 296 SGSN 299
              N
Sbjct: 852 RNDN 855



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   +  +Y WG  + G LG  +      P P  +L     +Q+   ++  F + 
Sbjct: 4189 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVT 4248

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G ++     G+GS G    G SD    P +L SL+   V +++  +G  H + +T  G
Sbjct: 4249 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4305

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+ E  +LGH
Sbjct: 4306 EVYAWGEGEDGKLGH 4320


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 156/324 (48%), Gaps = 23/324 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTA 224
           V  V+    HAA V +  +VFT G+  S   GH   TN  +F+PRLVE+L     + +  
Sbjct: 265 VSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTN--VFQPRLVESLSTCNVELIAC 322

Query: 225 GLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 281
           G   T  +T  G ++T G  TH  G LGHG  +    PK ++ PL+ +  V  ++ G  +
Sbjct: 323 GEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGL-PVSAVSCGTWH 381

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-- 339
              +T +G +Y+FG G+   LGHG +     P+ +++   KG+  + VS G  H  A+  
Sbjct: 382 TALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESL--KGLRTISVSCGVWHTAAVVE 439

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SSG ++TWG G    LGHGD   K  P  + SL  +   +       T  L 
Sbjct: 440 VIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAACGHTLTIGLT 499

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGR 451
            +G ++  G   +G LG P+    +    PR+++  L    V +++ G YH  V+T+ G 
Sbjct: 500 TSGHIFTVGSPVYGQLGNPN----NDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGE 555

Query: 452 LFGFGDNERAQLGHDTLRGCLEPT 475
           ++ +G     +LGH  +     PT
Sbjct: 556 VYTWGKGTNGRLGHGDIADRKVPT 579



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 138/290 (47%), Gaps = 19/290 (6%)

Query: 106 IVET-SAGNQMQITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ S  N   I  G +HT  ++ +     +  G+   G+LGHG   +  +   R++ P
Sbjct: 308 LVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP-KRVSGP 366

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V  VS    H A +  SGQ++T GD +    GH +     + P+ VE+LKG+   
Sbjct: 367 LDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSY-PKEVESLKGLRTI 425

Query: 221 QVTAGLNFTGFL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
            V+ G+  T  +            G + T G     +LGHGD   +  P  +  L +  +
Sbjct: 426 SVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY-N 484

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
             + A G +  + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ 
Sbjct: 485 FHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGN-PNNDGRYPRLVEE-QLGGGGVVEVAC 542

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           G  HV  L ++G VYTWGKG  G LGHGD  D+ +P  + +LK     +V
Sbjct: 543 GSYHVAVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRV 592



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 19/287 (6%)

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
           D S++  G   T   +  P+ +E+   +    V  G+     +T +  V T G    G+L
Sbjct: 239 DRSAYSPG---TTTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRL 295

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQ 307
           GHG   +   P+ +  L    +V  IA G  +  AVT  G +Y++G G++    LGHG  
Sbjct: 296 GHGIGTNVFQPRLVESLSTC-NVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSN 354

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
                P+ + +    G+ V  VS G  H   + SSG +YT+G G  G LGHG+    + P
Sbjct: 355 VSHWIPKRV-SGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYP 413

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVD---------TGSVYGFGWMGFGSLGFPDRGVSDK 418
           + + SLK    + V      T  +V+         +G ++ +G      LG  DR     
Sbjct: 414 KEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSK-- 471

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            L+P  + SL  ++  + + G   T+ +T  G +F  G     QLG+
Sbjct: 472 -LKPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGN 517



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 4/174 (2%)

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   D L P+ +++     + V  V+ G +H   +     V+TWG+   G LGHG   + 
Sbjct: 246 GTTTDVLVPKPLES--NVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNV 303

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-R 423
             P  + SL +     +   +  T  +  TG +Y +G  G  + G    G +     P R
Sbjct: 304 FQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWG-DGTHNAGLLGHGSNVSHWIPKR 362

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   L    VS +S G +HT ++T  G+L+ FGD     LGH     C  P E+
Sbjct: 363 VSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEV 416



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 123 HTL---LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           HTL   L ++  +F+ GS + G LG+     +              VV+V+    H A +
Sbjct: 492 HTLTIGLTTSGHIFTVGSPVYGQLGNPNNDGRYPRLVEEQL-GGGGVVEVACGSYHVAVL 550

Query: 180 LQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             +G+V+T G  ++   GH D  +R +  P LVEALK    K+V  G +FT  +
Sbjct: 551 TNAGEVYTWGKGTNGRLGHGDIADRKV--PTLVEALKDRSVKRVACGSSFTAAI 602


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 169/380 (44%), Gaps = 21/380 (5%)

Query: 108 ETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 166
           ET+   + QI+ G YHTL L  + +V++ G++    LG G  T    S T +        
Sbjct: 587 ETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTD---SSTPVQVSGLTDA 643

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           + ++    H   +   G V+T G N+S   G   T   I R   V+ +       +  G 
Sbjct: 644 IAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTT---INRSTPVQVIGLTDVIAIAGGD 700

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
             T  L   G V T G N +GQLG G T +R TP  +  L ++   + IA G  + +A+ 
Sbjct: 701 YHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADI---IAIAGGYVHSIALK 757

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G V+++G      LG G   D L P  +         ++ ++ G  H +AL S G V+
Sbjct: 758 SDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLT----DIIAIAGGYIHTIALKSDGTVW 813

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
            WG    G LG G   + + P  +S L   +AV   AR   T  L   G+V+ +G   +G
Sbjct: 814 AWGHNEGGQLGDGTTTNSSTPVQVSGLTDVIAV--TARLYHTIALKSDGTVWTWGRNIYG 871

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  D   +++ L  +++       V  I+ G YHT+ +   G ++ +G N   QLG+ 
Sbjct: 872 QLG--DGSTTERSLPVQVIG---LTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNW 926

Query: 467 TLRGCLEPTEIFIQEMEEDT 486
           + +    P      +M   T
Sbjct: 927 STKNSSTPVRSLRYDMNSVT 946



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 159/369 (43%), Gaps = 23/369 (6%)

Query: 116  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
            QI+ G YHTL L  + +V++CG++  G LG G    +    T +       V+ ++  + 
Sbjct: 1043 QISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRS---TPVQVSGLTDVIAIAGGDY 1099

Query: 175  HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   +     V+  G NS    G    TNR I  P  V  L  +    +  G   T  L 
Sbjct: 1100 HTIALKSDNTVWAWGSNSYGQLGDGTITNRSI--PTPVTYLTNIIA--IAGGYVHTIALK 1155

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V   G N +GQLG G T +R TP  ++ L +V   + IA    + +A+  +G V++
Sbjct: 1156 SDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDV---IAIAGEYVHTVALKSDGTVWA 1212

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            +G      LG G   +   P  +         V+ ++ G  H +AL S G V+TWG    
Sbjct: 1213 WGYNGYGQLGDGSTTNRSTPVQVSGLT----DVIAIAGGYVHTIALKSDGTVWTWGWNNS 1268

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            G LG G  I++  P  +S L    A+ +      T  L    +V+ +G   +G LG    
Sbjct: 1269 GQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG---D 1323

Query: 414  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            G +   L P  +  L       I+ G YHT+ +     ++ +G N   QLG  +    L 
Sbjct: 1324 GTTINRLTPVQVSGLT--DAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTANSLT 1381

Query: 474  PTEIFIQEM 482
            P +  +  +
Sbjct: 1382 PAQCLLSPI 1390



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 160/373 (42%), Gaps = 27/373 (7%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI+ G YHTL L  + +V++ G++  G LG    T +    T +       V+ ++    
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRS---TPVQVSGLTDVIAIAGGAY 203

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           H   +   G V+  G+N     G     D + P+    L + +       +  G   T  
Sbjct: 204 HTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTDVIA------IAGGYAHTIA 257

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           L   G V   G N  G+LG G T +R  P  +  L +V   + IA G ++ +A+  +G V
Sbjct: 258 LKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDV---IAIAGGNAHTIALKSDGTV 314

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G      LG G   +   P  +         V+ ++ G  H + L S G V+TWG  
Sbjct: 315 WAWGDNEGGQLGDGSTTNRSTPVKVSGLA----DVIAIAGGYSHTIVLRSDGTVWTWGHN 370

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G   +++ P  +S L   +A+        T  +   G+++ +G+  +G LG  
Sbjct: 371 EGGQLGDGSTTNRSTPVQVSGLADVIAI--AGGVYHTIAVKSDGTMWAWGYNWYGQLG-- 426

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
             G +     P  ++ L    V  I+ G YHT+ +   G ++ +G N   QLG  ++   
Sbjct: 427 -DGTTINSSTPVQVNGLT--DVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNR 483

Query: 472 LEPTEIFIQEMEE 484
             P +  +  M+ 
Sbjct: 484 STPAQRSLSGMKS 496



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 14/261 (5%)

Query: 217  VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
            +P  Q++AG   T  L   G V  CG+N +GQLG G T++R TP  ++ L +   V+ IA
Sbjct: 1039 LPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTD---VIAIA 1095

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  + +A+  +  V+++GS S   LG G     +  R+I T      +++ ++ G  H 
Sbjct: 1096 GGDYHTIALKSDNTVWAWGSNSYGQLGDG----TITNRSIPTPVTYLTNIIAIAGGYVHT 1151

Query: 337  VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
            +AL S G V+ WG    G LG G   +++ P  +S L   +A  +      T  L   G+
Sbjct: 1152 IALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIA--IAGEYVHTVALKSDGT 1209

Query: 397  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            V+ +G+ G+G LG    G +     P  +  L    V  I+ G  HT+ +   G ++ +G
Sbjct: 1210 VWAWGYNGYGQLG---DGSTTNRSTPVQVSGLT--DVIAIAGGYVHTIALKSDGTVWTWG 1264

Query: 457  DNERAQLGHDTLRGCLEPTEI 477
             N   QLG  T    L P ++
Sbjct: 1265 WNNSGQLGDGTTINRLTPVQV 1285



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 156/354 (44%), Gaps = 21/354 (5%)

Query: 89  NWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP 147
           NW   L    +   S+ +  +   + + I  G YHT+ L S+ +V++ G++  G LG G 
Sbjct: 170 NWNGQLGDESTTNRSTPVQVSGLTDVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGS 229

Query: 148 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIF 206
            T +    T +       V+ ++    H   +   G V+  GDN     G    TNR I 
Sbjct: 230 TTDRS---TPVQVSGLTDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSI- 285

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
            P  V  L  V    +  G   T  L   G V   G N  GQLG G T +R TP  ++ L
Sbjct: 286 -PVKVGGLSDVIA--IAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGL 342

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
            +V   + IA G S+ + +  +G V+++G      LG G   +   P  +         V
Sbjct: 343 ADV---IAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLA----DV 395

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           + ++ G  H +A+ S G ++ WG  + G LG G  I+ + P  ++ L   +A  +     
Sbjct: 396 IAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLTDVIA--IAGGYY 453

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL-RPRILDSLRAHHVSQISTG 439
            T  +   G+V+ +G+  +G LG  D  ++++     R L  +++     ++TG
Sbjct: 454 HTIAMKSDGAVWTWGFNYYGQLG--DGSITNRSTPAQRSLSGMKSVATPTVTTG 505



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 146/326 (44%), Gaps = 18/326 (5%)

Query: 86   CNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLG 144
            C  NW   L    ++  S+ +  +   + + I  G YHT+ L S+++V++ GS+  G LG
Sbjct: 1063 CGANWNGQLGDGTTINRSTPVQVSGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG 1122

Query: 145  HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR 203
             G  T + +  T + + +  +++ ++    H   +   G V+  G N     G    TNR
Sbjct: 1123 DGTITNRSIP-TPVTYLT--NIIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNR 1179

Query: 204  PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
                P  V  L  V    +      T  L   G V   G N +GQLG G T +R TP  +
Sbjct: 1180 S--TPVQVSGLTDVIA--IAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQV 1235

Query: 264  APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
            + L +   V+ IA G  + +A+  +G V+++G  ++  LG G   + L P  +       
Sbjct: 1236 SGLTD---VIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLT--- 1289

Query: 324  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
               + ++ GD H +AL S   V+ WG    G LG G  I++  P  +S L    A+ +  
Sbjct: 1290 -DAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSGLTD--AIAIAG 1346

Query: 384  RKRKTFVLVDTGSVYGFGWMGFGSLG 409
                T  L    +V+ +G   +G LG
Sbjct: 1347 GDYHTIALKSDNTVWAWGSNSYGQLG 1372



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 120/261 (45%), Gaps = 14/261 (5%)

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
           +P  Q++AG   T  L   G V T G+N +GQLG   T +R TP  ++ L +   V+ IA
Sbjct: 143 IPRSQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTD---VIAIA 199

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G  + +A+  +G V+++G+     LG G   D   P  +         V+ ++ G  H 
Sbjct: 200 GGAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLT----DVIAIAGGYAHT 255

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
           +AL S G V+ WG    G LG G   ++++P  +  L   +A  +      T  L   G+
Sbjct: 256 IALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIA--IAGGNAHTIALKSDGT 313

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           V+ +G    G LG    G +     P  +  L    V  I+ G  HT+V+   G ++ +G
Sbjct: 314 VWAWGDNEGGQLG---DGSTTNRSTPVKVSGLA--DVIAIAGGYSHTIVLRSDGTVWTWG 368

Query: 457 DNERAQLGHDTLRGCLEPTEI 477
            NE  QLG  +      P ++
Sbjct: 369 HNEGGQLGDGSTTNRSTPVQV 389



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 141/323 (43%), Gaps = 18/323 (5%)

Query: 89  NWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP 147
           NW   L    + + S+ +  +   + + I  G YHT+ L S+ +V++ G +  G LG G 
Sbjct: 618 NWNSQLGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGT 677

Query: 148 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS-SFCCGHRDTNRPIF 206
              +      I       V+ ++  + H   +   G V+T G N      G   TNR   
Sbjct: 678 TINRSTPVQVIGL---TDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRS-- 732

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
            P  V+ L  +    +  G   +  L   G V   G N +GQLG G T D  TP  ++ L
Sbjct: 733 TPVQVKGLADIIA--IAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGL 790

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
            ++   + IA G  + +A+  +G V+++G      LG G   +   P  +         V
Sbjct: 791 TDI---IAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLT----DV 843

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           + V+A   H +AL S G V+TWG+   G LG G   +++LP  +  L   +A  +     
Sbjct: 844 IAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIGLTDVIA--IAGGYY 901

Query: 387 KTFVLVDTGSVYGFGWMGFGSLG 409
            T  L   G+V+ +G+ G   LG
Sbjct: 902 HTIALKSDGAVWAWGYNGNNQLG 924



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 155/407 (38%), Gaps = 59/407 (14%)

Query: 115  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            + I  G YHT+ L S+ +V++ G +  G LG G  T +    T +     A ++ ++   
Sbjct: 694  IAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRS---TPVQVKGLADIIAIAGGY 750

Query: 174  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             H+  +   G V+  G N     G   T   +  P  V  L  +    +  G   T  L 
Sbjct: 751  VHSIALKSDGTVWAWGYNGYGQLGDGSTTDHL-TPVQVSGLTDIIA--IAGGYIHTIALK 807

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V   G N  GQLG G T +  TP  ++ L +V   + + A   + +A+  +G V++
Sbjct: 808  SDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTDV---IAVTARLYHTIALKSDGTVWT 864

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            +G      LG G   +   P  +         V+ ++ G  H +AL S G V+ W  GY 
Sbjct: 865  WGRNIYGQLGDGSTTERSLPVQVIGLT----DVIAIAGGYYHTIALKSDGAVWAW--GYN 918

Query: 354  GALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMG---FGSLG 409
            G    G+   K    P+ SL+  + +V   A    +   V   SV   GW+      +  
Sbjct: 919  GNNQLGNWSTKNSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSSVLLNGWVDGNRAATTA 978

Query: 410  FPDRGVSDKV-----------------------LRPRILDSLR--AHHV----------- 433
            + D G S  V                       L P      R  A +            
Sbjct: 979  WFDYGTSSGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQNSRGISYGSETIF 1038

Query: 434  ---SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               SQIS G YHT+ +   G ++  G N   QLG  T      P ++
Sbjct: 1039 LPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQV 1085


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 150/303 (49%), Gaps = 15/303 (4%)

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAG 225
            VS   N  +      +VF  G N     G    ++   P+F P L  AL+ V    +  G
Sbjct: 3043 VSVDNNPPSLPNDCPKVFVWGLNDKDQLGGVKGSKVKVPVFSPAL-SALRPV---HIAGG 3098

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-GSVVQIAAGPSYMLA 284
                  ++  G +  CG  T+G+LG G + +  TP++   L  V    V + +G  + LA
Sbjct: 3099 SKTLFIVSHDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALA 3158

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +G VYS+G G +  LGHG +     PR I++    G  V+ ++ G  H   + + G+
Sbjct: 3159 LTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESL--AGERVISIACGSAHSACVTARGH 3216

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGW 402
            +YTWG G  G LGHGD+  + +P+ + +L ++  +QV   +R  +T  L   G V+ +G 
Sbjct: 3217 LYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGD 3276

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
              FG LG   RG SD    P  ++ L +  V+Q+  G   ++ +T  G ++ +G  +  +
Sbjct: 3277 GDFGKLG---RGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFR 3333

Query: 463  LGH 465
            LGH
Sbjct: 3334 LGH 3336



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 141/310 (45%), Gaps = 11/310 (3%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            SA   V ++        V   G++F CG+  N     GH +    +  PR    L  V  
Sbjct: 3088 SALRPVHIAGGSKTLFIVSHDGKLFACGEGTNGRLGLGHSNN---VSTPRANPYLSHVLV 3144

Query: 220  KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            ++V   +G      LT  G V++ G    G+LGHG+ +    P+ I  L     V+ IA 
Sbjct: 3145 RRVAVHSGGKHALALTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAG-ERVISIAC 3203

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
            G ++   VT  G +Y++G G    LGHG+ + +L P+ ++      +  V   + D   +
Sbjct: 3204 GSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTL 3263

Query: 338  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            AL + G V++WG G  G LG G      +P  +  L S    QV    + +  L   G V
Sbjct: 3264 ALTACGKVFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEV 3323

Query: 398  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
            + +G   +  LG    G    V RP ++++LR   V  ++ G  H + VT   +++ +GD
Sbjct: 3324 WTWGKGDYFRLGH---GCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGD 3380

Query: 458  NERAQLGHDT 467
            N+  Q G+ T
Sbjct: 3381 NDHGQQGNGT 3390



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 158/346 (45%), Gaps = 8/346 (2%)

Query: 131  SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
            +V+  G +  G LG G E  +  + T  +  +A + VQ+   E     V   G+V+  G 
Sbjct: 3952 AVYGWGHNHRGQLG-GVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGY 4010

Query: 191  NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQ 248
             +    G    +  + +P L+ +++ V   +V   +G      L+  G V++ G    G+
Sbjct: 4011 GAGGRLGIGGIDS-VSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGK 4069

Query: 249  LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
            LGHG+ +    PK I  L  +  VV IA G ++   +T  G +Y++G G    LGHG+  
Sbjct: 4070 LGHGNRVSYDRPKLITALSGL-EVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSE 4128

Query: 309  DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
            D+L P+ ++      +  V   +GD   + +     V++WG G  G LG G      LP 
Sbjct: 4129 DQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPM 4188

Query: 369  PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
             +  LK    ++V    + +  L   GSVY +G   +  LG    G  + V RP  +  +
Sbjct: 4189 RIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGH---GSYEHVRRPMRVTGM 4245

Query: 429  RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +   +  I+TG  H V  TD G ++ +GDN+  QLG  T      P
Sbjct: 4246 QGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRP 4291



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 10/244 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            V   G N   QLG   G  +  P     +P       V IA G   +  V+ +G +++ G
Sbjct: 3059 VFVWGLNDKDQLGGVKGSKVKVPV---FSPALSALRPVHIAGGSKTLFIVSHDGKLFACG 3115

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             G+N  LG G  ++   PRA        +  V V +G +H +AL + G VY+WG+G  G 
Sbjct: 3116 EGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDGK 3175

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+ I    P  + SL     + +      +  +   G +Y +G   +G LG  D  +
Sbjct: 3176 LGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNI 3235

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                L P+++++L  + V Q++ G     T+ +T  G++F +GD +  +LG     GC  
Sbjct: 3236 Q---LVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAI 3292

Query: 474  PTEI 477
            P  +
Sbjct: 3293 PMNV 3296



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 12/245 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            V+  G N  GQLG   G  +  PTP  ++A L  V    Q+  G   + AVT +G VY+ 
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPV----QLVGGEQTLFAVTPDGKVYAT 4008

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G+   LG G      QP  + + +   I  V  ++G +H +AL + G VY+WG+G  G
Sbjct: 4009 GYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDG 4068

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+ +    P+ +++L     V +      +  L   G +Y +G   +G LG  D  
Sbjct: 4069 KLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGD-- 4126

Query: 415  VSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
             S+  L P+++++L +  V  ++  +G   T+ +TD   ++ +GD +  +LG     GC 
Sbjct: 4127 -SEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCK 4185

Query: 473  EPTEI 477
             P  I
Sbjct: 4186 LPMRI 4190



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 113/243 (46%), Gaps = 9/243 (3%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 178
            G++   L ++  V+S G    G LGHG   T  +   R I   +   V+ ++    H+A 
Sbjct: 3153 GKHALALTADGKVYSWGEGEDGKLGHGNRIT--LEAPRLIESLAGERVISIACGSAHSAC 3210

Query: 179  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRG 236
            V   G ++T G       GH D N  +  P++VEAL      QV  G     T  LT  G
Sbjct: 3211 VTARGHLYTWGLGEYGRLGHGDDNIQLV-PKMVEALANYRVIQVACGSRDAQTLALTACG 3269

Query: 237  HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
             V + G    G+LG G +     P ++  L  +G V Q+  G  + LA+T +G V+++G 
Sbjct: 3270 KVFSWGDGDFGKLGRGGSDGCAIPMNVERLNSLG-VTQVECGAQFSLALTRDGEVWTWGK 3328

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
            G  F LGHG      +P  ++  R  G  V+ V+ G  H +A+ S   V+ WG    G  
Sbjct: 3329 GDYFRLGHGCDAHVRRPTLVEALR--GRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQ 3386

Query: 357  GHG 359
            G+G
Sbjct: 3387 GNG 3389



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 119/263 (45%), Gaps = 13/263 (4%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHA 176
            G++   L ++  V+S G    G LGHG      VS+ R   I   S   VV ++    H+
Sbjct: 4047 GKHCLALSADGEVYSWGEGEDGKLGHGNR----VSYDRPKLITALSGLEVVCIACGGAHS 4102

Query: 177  AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
            A +   G+++T G       GH D+   +  P+LVEAL       V  G      L I  
Sbjct: 4103 ACLTARGRIYTWGKGRYGRLGHGDSEDQLI-PKLVEALSSFRVIDVACGSGDAQTLCITD 4161

Query: 237  --HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
              +V + G   +G+LG G +     P  I  L+ +  V+++  G  + +A+   G VY++
Sbjct: 4162 DDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGL-RVIKVECGSQFSVALCQCGSVYTW 4220

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G    LGHG      +P  +     +G  +V ++ G  H VA   +G VYTWG    G
Sbjct: 4221 GKGDYHRLGHGSYEHVRRPMRVTGM--QGKMIVSIATGSLHCVACTDTGEVYTWGDNDEG 4278

Query: 355  ALGHGDEIDKTLPEPLSSLKSHL 377
             LG G  +    P  L +L+ ++
Sbjct: 4279 QLGDGTTLAAQRPRLLMALQVNI 4301



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 129/307 (42%), Gaps = 38/307 (12%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           + Q++ +E  A  +   G V+T   ++               P LV  L+     QV+  
Sbjct: 485 IQQIACAEKLALLLTHDGAVYTLPYDT-------------MTPHLVPGLESKTITQVSCH 531

Query: 226 LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSY 281
                +L     G   + G    G+LGHGDT  R  P+   PL  +    VV++AAG + 
Sbjct: 532 SLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQ---PLHHLAHHEVVRVAAGLAC 588

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV---VRVSAGDEHVVA 338
              +T  G +Y++G G+   LGHG   + L P+ + +F    I     V +  G+   + 
Sbjct: 589 SAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPV-SFNAHNIERIIDVALGWGEGSTLC 647

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
               G V  +G+G  G            P  LS+L      +V   +     L D G VY
Sbjct: 648 CTWEGAVQVFGEGEAGT-----------PRALSALAMFRVTRVYTGEHWHAALTDGGQVY 696

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  +    P+++++L+   +  +S G  H + ++  G LF +G +
Sbjct: 697 TWGKGDGYRLGH---GNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTH 753

Query: 459 ERAQLGH 465
           ER Q+ +
Sbjct: 754 ERTQISN 760



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 24/193 (12%)

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G  +S+G G +  LGHG+      P+ +         VVRV+AG      + S G +YTW
Sbjct: 544 GGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHH--EVVRVAAGLACSAVITSRGALYTW 601

Query: 349 GKGYCGALGHGDEIDKTLPEPLS----SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           G+G  G LGHG   +   P+P+S    +++  + V +   +  T      G+V  FG   
Sbjct: 602 GRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGE 661

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G+              PR L +L    V+++ TG +    +TD G+++ +G  +  +LG
Sbjct: 662 AGT--------------PRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLG 707

Query: 465 HDTLRGCLEPTEI 477
           H    G +E T+I
Sbjct: 708 H----GNMESTKI 716



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 17/156 (10%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           I + +++  ++  + L   G VYT               D   P  +  L+S    QV  
Sbjct: 483 IRIQQIACAEKLALLLTHDGAVYTL------------PYDTMTPHLVPGLESKTITQVSC 530

Query: 384 RK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
               R        G  + +G    G LG  D    D    P+ L  L  H V +++ GL 
Sbjct: 531 HSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDA---PQPLHHLAHHEVVRVAAGLA 587

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            + V+T RG L+ +G   + +LGH T+  CL P  +
Sbjct: 588 CSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPV 623



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 2/144 (1%)

Query: 126  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
            L +   VFS G    G LG G  +  C     +   ++  V QV      +  + + G+V
Sbjct: 3265 LTACGKVFSWGDGDFGKLGRG-GSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEV 3323

Query: 186  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
            +T G    F  GH   +  + RP LVEAL+G     V  G      +T    V   G N 
Sbjct: 3324 WTWGKGDYFRLGH-GCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDND 3382

Query: 246  HGQLGHGDTLDRPTPKSIAPLEEV 269
            HGQ G+G T     P  +A +E V
Sbjct: 3383 HGQQGNGTTCVNRRPALVAGVEGV 3406


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 151/323 (46%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q+S    H A   + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 256 VQQISCGSRHIALTTRQGEVFTWGEELGGRLGH-GTDEDISRPKLVESLAVSNVEYIACG 314

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++  G  ++  G LGHG       PK ++ PLE +  V+ +A G  + 
Sbjct: 315 EFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGL-QVLSVACGSWHS 373

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 341
                +G V++FG G+   LGHG + +   P+ +++    G   ++V+ G  H  A+   
Sbjct: 374 ALAMSSGKVFTFGDGTFGALGHGNRENVAYPKEVESL--SGFRTMKVACGVWHSAAIVET 431

Query: 342 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                    S  ++TWG G    LGHGD+  + +P  + +L  +   QV      T  L 
Sbjct: 432 TSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIALA 491

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G   +G LG P    +D     ++ D L +  V +IS G YH  V+T R  +
Sbjct: 492 TSGHVFTMGSSNYGQLGNPK---ADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEV 548

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH  +    +PT
Sbjct: 549 YTWGMGANGRLGHGGIEDKKKPT 571



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 17/290 (5%)

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           +S+  C   D    +  P+ +E+   +  +Q++ G       T +G V T G    G+LG
Sbjct: 232 SSNLVCSKTD----VLIPKPLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLG 287

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQH 308
           HG   D   PK +  L  V +V  IA G  +  AVT +G +Y++G GS     LGHG   
Sbjct: 288 HGTDEDISRPKLVESLA-VSNVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGA 346

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
               P+ + +   +G+ V+ V+ G  H     SSG V+T+G G  GALGHG+  +   P+
Sbjct: 347 SHWLPKRV-SGPLEGLQVLSVACGSWHSALAMSSGKVFTFGDGTFGALGHGNRENVAYPK 405

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVL 420
            + SL     ++V      +  +V+T S  G        F W G G       G  +  L
Sbjct: 406 EVESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVSRKLFTW-GDGDKNRLGHGDKEARL 464

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
            P ++ +L  ++  Q++ G   T+ +   G +F  G +   QLG+    G
Sbjct: 465 VPTVVQALVDNNFHQVACGYSMTIALATSGHVFTMGSSNYGQLGNPKADG 514



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 149/346 (43%), Gaps = 22/346 (6%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
            QI+ G  H  L +    VF+ G  L G LGHG  T + +S  + +   + ++V  ++  
Sbjct: 257 QQISCGSRHIALTTRQGEVFTWGEELGGRLGHG--TDEDISRPKLVESLAVSNVEYIACG 314

Query: 173 ENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           E H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   + 
Sbjct: 315 EFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSA 374

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV----- 285
                G V T G  T G LGHG+  +   PK +  L      +++A G  +  A+     
Sbjct: 375 LAMSSGKVFTFGDGTFGALGHGNRENVAYPKEVESLSGF-RTMKVACGVWHSAAIVETTS 433

Query: 286 -TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            TG  +V    +++G G    LGHG++   L P  +Q       H  +V+ G    +AL 
Sbjct: 434 QTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFH--QVACGYSMTIALA 491

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           +SG+V+T G    G LG+     K   +    L S L  ++        VL     VY +
Sbjct: 492 TSGHVFTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTW 551

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           G    G LG    G+ DK  +P I+D+L+  HV  I+ G   T  +
Sbjct: 552 GMGANGRLGH--GGIEDK-KKPTIVDALKDRHVKSIACGSNFTTCI 594



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 140/303 (46%), Gaps = 21/303 (6%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ A + ++ I  G +HT  ++ S     +  GS   G+LGHG   +  +   R++ P
Sbjct: 299 LVESLAVSNVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLP-KRVSGP 357

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V+ V+    H+A  + SG+VFT GD +    GH +     + P+ VE+L G    
Sbjct: 358 LEGLQVLSVACGSWHSALAMSSGKVFTFGDGTFGALGHGNRENVAY-PKEVESLSGFRTM 416

Query: 221 QVTAGL----------NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           +V  G+          + TG   +   + T G     +LGHGD   R  P  +  L +  
Sbjct: 417 KVACGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVD-N 475

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           +  Q+A G S  +A+  +G V++ GS +   LG+  + D  QP  +Q      + V  +S
Sbjct: 476 NFHQVACGYSMTIALATSGHVFTMGSSNYGQLGN-PKADGKQPCQVQDKLSSEL-VEEIS 533

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTF 389
            G  HV  L S   VYTWG G  G LGHG   DK  P  + +LK  H+    C     T 
Sbjct: 534 CGSYHVAVLTSRSEVYTWGMGANGRLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFTTC 593

Query: 390 VLV 392
           + +
Sbjct: 594 ICI 596



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 20/228 (8%)

Query: 265 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           PLE   V  V QI+ G  ++   T  G V+++G      LGHG   D  +P+ +++    
Sbjct: 247 PLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVS 306

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLS-SLKSHLAV 379
            +  +  + G+ H  A+ +SG +Y WG G    G LGHG      LP+ +S  L+    +
Sbjct: 307 NVEYI--ACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVL 364

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            V      + + + +G V+ FG   FG+LG  +R   + V  P+ ++SL      +++ G
Sbjct: 365 SVACGSWHSALAMSSGKVFTFGDGTFGALGHGNR---ENVAYPKEVESLSGFRTMKVACG 421

Query: 440 LYHTVVVTDRG----------RLFGFGDNERAQLGHDTLRGCLEPTEI 477
           ++H+  + +            +LF +GD ++ +LGH      L PT +
Sbjct: 422 VWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVV 469



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 8/201 (3%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  Y+       V+ S GS +  C     + D L P+ +++     + V ++S G  H+ 
Sbjct: 214 GDVYVWGEVWTDVIPSEGSSNLVC----SKTDVLIPKPLES--DVVLDVQQISCGSRHIA 267

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
                G V+TWG+   G LGHG + D + P+ + SL       +   +  T  +  +G +
Sbjct: 268 LTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTCAVTASGDL 327

Query: 398 YGFGWMGFGSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           Y +G  G  + G    G+ +   L  R+   L    V  ++ G +H+ +    G++F FG
Sbjct: 328 YNWG-DGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSALAMSSGKVFTFG 386

Query: 457 DNERAQLGHDTLRGCLEPTEI 477
           D     LGH        P E+
Sbjct: 387 DGTFGALGHGNRENVAYPKEV 407


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G+    V AG 
Sbjct: 3933 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 3991

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGH D+ D+  PK +  L+    VV IA  +G +  L 
Sbjct: 3992 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQG-HRVVDIACGSGDAQTLC 4050

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ VV+V  G +  VAL  SG 
Sbjct: 4051 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4108

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4109 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4168

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   V++++ G  HT+
Sbjct: 4169 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4205



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 3919 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 3978

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L  +  VV +AAG ++   VT  G +Y++G G    LGH +  D+L+P+ ++  +   + 
Sbjct: 3979 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4037

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL     V+V    
Sbjct: 4038 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4097

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4098 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4154

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4155 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4183



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 146/298 (48%), Gaps = 11/298 (3%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            S+  +++  A+   +A  +++ +VF  G N     G    ++ I  P   E L  +   Q
Sbjct: 2940 SSGSLIRKKAAGLESAATIRT-KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQ 2997

Query: 222  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGP 279
            V  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L   V   V + +G 
Sbjct: 2998 VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGG 3057

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I    ++ G  H  AL
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAL 3115

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSV 397
             SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +R  +T  L D G V
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLV 3175

Query: 398  YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            + +G   FG LG   RG S+    P+ ++ L    V QI  G   ++ +T  G ++ +
Sbjct: 3176 FSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 155/320 (48%), Gaps = 25/320 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 454 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDTL    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    ++V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQLGHDTLRGCL-EPTEI 477
           ++ Q   DTLR    EPT +
Sbjct: 738 DQCQ-HFDTLRVTKPEPTAL 756



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 15/264 (5%)

Query: 220  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 276
            ++  AGL      TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A
Sbjct: 2946 RKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 2999

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 335
             G   + AVT  G VY+ G  +N  LG G     +  PR I       +  V V +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
              AL   G V++WG+G  G LGH   ++   P  + +LK+     +      +  L  +G
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3119

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 453
             +Y +G   +G LG  D       L+P+++  L  H V Q++ G     T+ +TD G +F
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176

Query: 454  GFGDNERAQLGHDTLRGCLEPTEI 477
             +GD +  +LG     GC  P  I
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNI 3200



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 119/250 (47%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV V+A
Sbjct: 3931 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 3989

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A V  +G ++T G       GH D+   + +P+LVE L+G     +   +G   T
Sbjct: 3990 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEVLQGHRVVDIACGSGDAQT 4048

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  +G VV++  G  + +A+T +G
Sbjct: 4049 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4107

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4108 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4165

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4166 DNDEGQLGDG 4175



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  +    Q+  G   + AVT +G +Y
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPI----QLIGGEQTLFAVTADGKLY 3898

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 3899 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 3958

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V V A    +  +   G +Y +G   +G LG  D
Sbjct: 3959 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4018

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               S+  L+P++++ L+ H V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4019 ---SEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4075

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4076 CKVPMKI 4082



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 27/329 (8%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 499

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
           +A +      G ++  L +   V+S G    G LGHG       P+     S  +     
Sbjct: 500 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQ----G 550

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             HVV ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 609

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
             G      L +   G V + G   +G+LG G +    TPK I  L+++  V+++  G  
Sbjct: 610 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQ 668

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL 
Sbjct: 669 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 726

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
               V++WG        H D +  T PEP
Sbjct: 727 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 753



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 5/177 (2%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            GR+ T L  +  VFS G    G LGH      C     I       +  ++   +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
              SG+++T G       GH D N    +P++V+ L G    QV  G     T  LT  G 
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            V + G    G+LG G +     P++I  L   G V QI  G  + LA+T +GVV+++
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   VV+V      + 
Sbjct: 4043 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4101

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4102 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4160

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    V ++A G ++ LA
Sbjct: 4161 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4206



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   SG +Y WG  + G LG  +     +P P  +L +   +Q+   ++  F + 
Sbjct: 3833 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVT 3892

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G
Sbjct: 3893 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3949

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G+ E  +LGH     C  P  I
Sbjct: 3950 EVYSWGEAEDGKLGHGNRSPCDRPRVI 3976


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 140/282 (49%), Gaps = 12/282 (4%)

Query: 200 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 259
           ++ R +  P + ++L     +QV  G N T  + + G +  CG  ++G+LG G++ D  T
Sbjct: 503 ESGRGVNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFT 560

Query: 260 PKSIAPLEEVGSVVQIAAG---PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 316
              I+ L+    V+QIA       + LA+T +G V+S+G G    LGHG    + +PR I
Sbjct: 561 LSPISALQGY-VVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQI 619

Query: 317 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
           +  R  G  VV ++ G +H   +   G ++T+G G  G LGHG+  +K  PE +++L+ H
Sbjct: 620 EALR--GEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKH 677

Query: 377 LAVQVCARKRKTFVL-VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
              QV      T VL  D  +V+ FG   +G LG    G       P+ +D L      +
Sbjct: 678 AIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGL---GSCTAKTSPQAIDVLAGIGCKK 734

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           I  G   +VV+T+ GR+F FG           LRG  +P +I
Sbjct: 735 ICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQI 776



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 147/317 (46%), Gaps = 19/317 (5%)

Query: 158 INFP----SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 213
           +N P    S A   QV   +N    V  +G +  CG+ S    G  +++  +F    + A
Sbjct: 508 VNVPTVTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDD-LFTLSPISA 566

Query: 214 LKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EE 268
           L+G    Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L  EE
Sbjct: 567 LQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEE 626

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
           V   V +A G  +   VT +G +++FG+G    LGHG   ++  P  +    +  I   +
Sbjct: 627 V---VNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIG--Q 681

Query: 329 VSAGDEHVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
           V+ G  H + L + G  V+ +G G  G LG G    KT P+ +  L      ++C   + 
Sbjct: 682 VACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQF 741

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           + VL + G V+ FG       G P+ G      +P+ + +L +H +  +  G  H + +T
Sbjct: 742 SVVLTNDGRVFSFGQERL--TGQPE-GRLRGPQKPQQIQALASHFIDDVCVGAEHVLALT 798

Query: 448 DRGRLFGFGDNERAQLG 464
             G ++G+G+N   QLG
Sbjct: 799 STGEVWGWGNNVDGQLG 815



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 145/332 (43%), Gaps = 58/332 (17%)

Query: 107 VETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 165
           V  S  +  Q+  G+  T ++  N ++ +CG    G LG G  +    + + I+      
Sbjct: 513 VTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMG-NSDDLFTLSPISALQGYV 571

Query: 166 VVQVSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           V+Q++ S   + H+  +  SG+VF+ GD      GH +++R   RPR +EAL+G     +
Sbjct: 572 VIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGEEVVNM 630

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G   +  +T+ G + T G+  +G+LGHG++ ++ TP+ +  LE+  ++ Q+A G ++ 
Sbjct: 631 ACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEK-HAIGQVACGLNHT 689

Query: 283 LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTF---------------------- 319
           L ++ +G  V++FG G    LG G    +  P+AI                         
Sbjct: 690 LVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDG 749

Query: 320 ----------------RRKGIH------------VVRVSAGDEHVVALDSSGYVYTWGKG 351
                           R +G              +  V  G EHV+AL S+G V+ WG  
Sbjct: 750 RVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNN 809

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
             G LG G    +  P  +  LK     Q+ A
Sbjct: 810 VDGQLGLGHSNAQREPCVIPDLKGKNIRQISA 841



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 11/177 (6%)

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y +G G      HG+  +  +   + T  +      +V  G      +  +G +   G+G
Sbjct: 491 YLWGGGR-----HGQLAESGRGVNVPTVTKSLASAQQVVCGQNCTFVVQVNGTILACGEG 545

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK---TFVLVDTGSVYGFGWMGFGSL 408
             G LG G+  D     P+S+L+ ++ +Q+   +     +  L D+G V+ +G   +G L
Sbjct: 546 SYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKL 605

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G    G SD+  RPR +++LR   V  ++ G  H+ VVT  G+LF FG+ +  +LGH
Sbjct: 606 G---HGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGH 659



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 9/147 (6%)

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           Y WG G  G L         +P    SL S  A QV   +  TFV+   G++   G   +
Sbjct: 491 YLWGGGRHGQLAESGR-GVNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACGEGSY 547

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERAQ 462
           G LG    G SD +     + +L+ + V QI+T      H++ +TD G +F +GD +  +
Sbjct: 548 GRLGM---GNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGK 604

Query: 463 LGHDTLRGCLEPTEIFIQEMEEDTGLA 489
           LGH        P +I     EE   +A
Sbjct: 605 LGHGNSDRQRRPRQIEALRGEEVVNMA 631


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 138/280 (49%), Gaps = 9/280 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V V++   H   +   G+V++ G+      GH + + P  RPR++E+L+G     + AG 
Sbjct: 4055 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGTEVVDIAAGG 4113

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
              +  +T  G ++T G   +G+LGHGD+ D+  PK +  L+    V+ IA  +G +  L 
Sbjct: 4114 AHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY-RVIDIACGSGDAQTLC 4172

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I +    G+ V +V  G +  VAL  SG 
Sbjct: 4173 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGVGVTKVECGSQFSVALTKSGA 4230

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTWGKG    LGHG +     P  +  L+    + +           + G VY +G   
Sbjct: 4231 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4290

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             G LG    G ++ + RPR++ +L+   +++++ G  HT+
Sbjct: 4291 EGQLG---DGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4327



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 6/269 (2%)

Query: 208  PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P L+E+++ V  K+V   +G      L+  G V++ G    G+LGHG+      P+ I  
Sbjct: 4041 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4100

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L     VV IAAG ++   +T  G +Y++G G    LGHG+  D+L+P+ ++  +   + 
Sbjct: 4101 LRGT-EVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4159

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
             +   +GD   + L     V++WG G  G LG G      +P  + SL      +V    
Sbjct: 4160 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGS 4219

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
            + +  L  +G+VY +G   +  LG    G  D V RPR +  L+   V  I+TG  H V 
Sbjct: 4220 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4276

Query: 446  VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             T+ G ++ +GDN+  QLG  T      P
Sbjct: 4277 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4305



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 133/276 (48%), Gaps = 10/276 (3%)

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
            +VF  G N     G    ++ I  P   E L  +   QV  G      +T  G V+ CG 
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 3022

Query: 244  NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
             T+G+LG G  +   P P+ I  L   V   V + +G  +  A+T +G V+S+G G +  
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3082

Query: 302  LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
            LGH  + +  +PR I+  + K I    ++ G  H  A+ SSG +YTWG G  G LGHGD 
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAAITSSGELYTWGLGEYGRLGHGDN 3140

Query: 362  IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              +  P+ +  L  H  +QV   +R  +T  L D G V+ +G   FG LG   RG S+  
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3197

Query: 420  LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
              P+ ++ L    V QI  G   ++ +T  G ++ +
Sbjct: 3198 NIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 152/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V QV+ +E     + ++G+++T   N++              P+LV+ L      ++ A 
Sbjct: 453 VTQVACAEKCFLILSRNGKLYTQAYNNN-----------TLGPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +     + + G    G+LGHGDT+    PK ++ L  ++ G  V+ IA G +
Sbjct: 502 PDGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T +G +Y++G G+   LGHG   D+  P  +     KG+ VV VS  +GD   ++
Sbjct: 562 YSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGL--KGLKVVDVSCGSGDAQTLS 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  +   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P+I++ L+   V  ++ G  H + +T+ G ++ +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 124/264 (46%), Gaps = 15/264 (5%)

Query: 220  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 276
            ++ TAGL  T   TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A
Sbjct: 2949 RKKTAGLESTA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 3002

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 335
             G   + AVT  G VY+ G  +N  LG G     +  PR I       +  V V +G  H
Sbjct: 3003 GGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
              AL   G V++WG+G  G LGH   ++   P  + +LK+     +      +  +  +G
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 3122

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 453
             +Y +G   +G LG  D       L+P+++  L  H V Q++ G     T+ +TD G +F
Sbjct: 3123 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179

Query: 454  GFGDNERAQLGHDTLRGCLEPTEI 477
             +GD +  +LG     GC  P  I
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNI 3203



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 159/364 (43%), Gaps = 40/364 (10%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +  +L +L  +Q+      +  +SRN +  L  +   N     + +Q +  S +IV+ 
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGK--LYTQAYNNNTLGPQLVQGLA-SRNIVKI 498

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA------ 163
           +A        G+++  L + S +FS G    G LGHG      VS       SA      
Sbjct: 499 AAH-----PDGQHYLALSATSELFSWGCGDGGRLGHG----DTVSLEEPKLVSALSGKQT 549

Query: 164 -AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
              V+ ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V
Sbjct: 550 GKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTV-PMLVTGLKGLKVVDV 608

Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           + G      L++   G V + G   +G+LG G +    TPK I  L+++  +V++  G  
Sbjct: 609 SCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DIVKVRCGSQ 667

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+T +G VYS+G G N  LGHG +     P+ +     +G  VV V+ G  H +AL 
Sbjct: 668 FSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGL--QGKKVVDVAVGSTHCLALT 725

Query: 341 SSGYVYTWGKGYCGALGHGD--EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            SG VY+WG        H D   I K +P  L  L S           K  V +  G   
Sbjct: 726 ESGEVYSWGSN--DQCQHFDTLRIAKPVPSVLPGLDS-----------KHIVGISCGPAQ 772

Query: 399 GFGW 402
            F W
Sbjct: 773 SFAW 776



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 113  NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
             ++ + +G  H L +S+   V+S G +  G LGHG   + C     I       VV ++A
Sbjct: 4053 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGTEVVDIAA 4111

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
               H+A +  +G+++T G       GH D+   + +P+LVEAL+G     +   +G   T
Sbjct: 4112 GGAHSACITAAGELYTWGKGRYGRLGHGDSEDQL-KPKLVEALQGYRVIDIACGSGDAQT 4170

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              LT    V + G   +G+LG G +     P  I  L  VG V ++  G  + +A+T +G
Sbjct: 4171 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVG-VTKVECGSQFSVALTKSG 4229

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
             VY++G G    LGHG      +PR +Q    +G  V+ ++ G  H V     G VYTWG
Sbjct: 4230 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4287

Query: 350  KGYCGALGHG 359
                G LG G
Sbjct: 4288 DNDEGQLGDG 4297



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 236  GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++  G N  GQLG   G  +  PTP +++A L  V    Q+  G   + AVT +G +Y
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4020

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            + G G+   LG G       P  +++ +   I  V V++G +H +AL S G VY+WG+  
Sbjct: 4021 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4080

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+      P  + SL+    V + A    +  +   G +Y +G   +G LG   
Sbjct: 4081 DGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLG--- 4137

Query: 413  RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             G S+  L+P+++++L+ + V  I+  +G   T+ +TD   ++ +GD +  +LG     G
Sbjct: 4138 HGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4197

Query: 471  CLEPTEI 477
            C  P +I
Sbjct: 4198 CKVPMKI 4204



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 139/317 (43%), Gaps = 24/317 (7%)

Query: 96   FLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 155
            FL S     D  + S G+ ++  T    +     + VF  G +    LG        +  
Sbjct: 2929 FLASDNDEEDDDKASTGSFVRKKTAGLESTATIRTKVFVWGLNDKDQLGG-------LKG 2981

Query: 156  TRINFPS------AAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFR 207
            ++I  PS      A +VVQV+        V   G+V+ CG+  N     G      PI  
Sbjct: 2982 SKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPI-- 3039

Query: 208  PRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            PR + AL     K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  
Sbjct: 3040 PRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA 3099

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L+    +  IA G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  
Sbjct: 3100 LK-TKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHR 3156

Query: 326  VVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
            V++V+ G  D   +AL   G V++WG G  G LG G      +P+ +  L      Q+  
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIEC 3216

Query: 384  RKRKTFVLVDTGSVYGF 400
              + +  L  +G V+ +
Sbjct: 3217 GAQFSLALTKSGVVWTW 3233



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 21/213 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V Q+A      L ++ NG +Y+    +N           L P+ +Q    + I  +    
Sbjct: 453 VTQVACAEKCFLILSRNGKLYTQAYNNN----------TLGPQLVQGLASRNIVKIAAHP 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQV----CARKR 386
             +H +AL ++  +++WG G  G LGHGD +    P+ +S+L       QV    C    
Sbjct: 503 DGQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTY 562

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTV 444
              +  D G +Y +G   +G LG    G S+    P ++  L+   V  +S  +G   T+
Sbjct: 563 SAAITAD-GELYTWGRGNYGRLG---HGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTL 618

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 619 SVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 19/205 (9%)

Query: 279  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQTFRRKGIHVVRVSAGDE 334
            P   L      +        N   GH E HD    E   + +Q   R+          D+
Sbjct: 3907 PRQFLDEVAKKIRELMADNENMNAGH-ESHDTFKREQDEQLVQWMNRRP---------DD 3956

Query: 335  HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
              ++   SG +Y WG  + G LG  +     +P P  +L +   VQ+   ++  F +   
Sbjct: 3957 WTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTAD 4016

Query: 395  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 452
            G +Y     G+G+ G    G ++ V  P +L+S++   + +++  +G  H + ++  G +
Sbjct: 4017 GKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4073

Query: 453  FGFGDNERAQLGHDTLRGCLEPTEI 477
            + +G+ E  +LGH     C  P  I
Sbjct: 4074 YSWGEAEDGKLGHGNRSPCDRPRVI 4098



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 4/167 (2%)

Query: 119  TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
            +G   TL L  + +V+S G    G LG G  +  C    +I+  +   V +V      + 
Sbjct: 4165 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGVGVTKVECGSQFSV 4223

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             + +SG V+T G       GH   +  + RPR V+ L+G     +  G       T  G 
Sbjct: 4224 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4282

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            V+T G N  GQLG G T     P+ +A L+    + ++A G ++ LA
Sbjct: 4283 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKINRVACGSAHTLA 4328


>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 546

 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 163/363 (44%), Gaps = 9/363 (2%)

Query: 128 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
           ++ ++ + GS+  G LG+G  TT   +   ++ P+    V ++A + H+  +  +G V  
Sbjct: 52  ASDTILAWGSNFFGELGNG-TTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTAAGTVLA 110

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            GDNS    G   T      P  V    GV    V AG + +  LT  G V   G N+ G
Sbjct: 111 WGDNSHGQLGD-GTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSAGTVLAWGGNSFG 169

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
           QLG G  +DR TP ++A L    +V  +AAG ++ +A+T  G V ++G      LG G  
Sbjct: 170 QLGDGTVVDRSTPVAVA-LPPSTTVTAVAAGATHSVALTSAGTVLAWGGNPFGQLGDGTV 228

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            D   P A+         V  V+AG  H VAL S+G V  WG+ + G LG G  +D++ P
Sbjct: 229 VDRSTPVAVA--LPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRSTP 286

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
             +S      A  V A +  +  L   G V  +G   FG LG    G +     P  +  
Sbjct: 287 TVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLG---DGTTTTSSTPVSVTL 343

Query: 428 LRAHHVSQIST-GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 486
             A  ++ IS     H+V +T  G    +G N R QLG  T      P ++ +      T
Sbjct: 344 PAATTITAISARDSQHSVAMTSAGAALSWGRNLRGQLGDGTTTTRSTPVDVHLPTGVTVT 403

Query: 487 GLA 489
            +A
Sbjct: 404 AIA 406



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 11/227 (4%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H++ L S  +V + G +  G LG G    +      +  P +  V  V+A  NH
Sbjct: 196 VAAGATHSVALTSAGTVLAWGGNPFGQLGDGTVVDRSTPV-AVALPPSTTVTAVAAGGNH 254

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLNFTGFLT 233
           +  +  +G V   G N     G       + R  P +V    GV    V AG   +  LT
Sbjct: 255 SVALTSAGTVLAWGRN---FFGQLGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALT 311

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVY 292
             G V   G+NT GQLG G T    TP S+  L    ++  I+A  S + +A+T  G   
Sbjct: 312 TAGGVLAWGNNTFGQLGDGTTTTSSTPVSVT-LPAATTITAISARDSQHSVAMTSAGAAL 370

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           S+G      LG G       P  +      G+ V  ++AGD+H +AL
Sbjct: 371 SWGRNLRGQLGDGTTTTRSTP--VDVHLPTGVTVTAIAAGDDHSLAL 415


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 150/318 (47%), Gaps = 26/318 (8%)

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
           S  HV+ +SA  +H   +L          +  F          I  P L E+ +   C +
Sbjct: 10  SPPHVLLISAGASHTVALL----------SKQFESSEMLARFLISTPLLPESWR--LCSK 57

Query: 222 VTA-GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           V A  +NF G +     V + G    GQLGHGDT DR  P  ++  +    +V +  G  
Sbjct: 58  VNASAVNFPGNV-----VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ-DIVSVTCGAD 111

Query: 281 YMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           Y +A + +G  VYS+G G    LGHG+  D   P  I+    +G+ + ++S GD H +A+
Sbjct: 112 YTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRAL--QGLRIKQISCGDCHCLAV 169

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
                V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG
Sbjct: 170 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYG 229

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +GW  +G+LG  D   +D+++  ++  ++    +  +S G  HT+ ++  G L+  G ++
Sbjct: 230 WGWGRYGNLGLGD--TNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSK 285

Query: 460 RAQLGHDTLRGCLEPTEI 477
             QLGH     CL P ++
Sbjct: 286 YGQLGHGDFEDCLVPRKV 303



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 125/251 (49%), Gaps = 7/251 (2%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ-VFTCGD 190
           V S G    G LGHG +T   +  T+++      +V V+   ++     +SG+ V++ G 
Sbjct: 70  VCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGW 128

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
                 GH D +  +F P  + AL+G+  KQ++ G      +T+   V + G N +G+LG
Sbjct: 129 GDFGRLGHGDPSD-LFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELG 187

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 310
            G T D   P+ I   E +  +  +AAG  + +A+T +G +Y +G G    LG G+ +D 
Sbjct: 188 LGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDR 246

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
           L P  +      G  +V VS G  H +++ SSG +YT G    G LGHGD  D  +P  +
Sbjct: 247 LIPEKVNI---DGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKV 303

Query: 371 SSLKSHLAVQV 381
            +L   L  QV
Sbjct: 304 QALSDKLISQV 314



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 6/192 (3%)

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTW 348
           VV S+G G +  LGHG+  D L P  +  F   G  +V V+ G ++ VA   SG  VY+W
Sbjct: 69  VVCSWGRGEDGQLGHGDTDDRLLPTKLSAF--DGQDIVSVTCGADYTVARSKSGKDVYSW 126

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G G  G LGHGD  D  +P P+ +L+     Q+         +     V  +G    G L
Sbjct: 127 GWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 186

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
           G    G +     P+ + +     +  ++ G  H+V +T+ G L+G+G      LG    
Sbjct: 187 GL---GTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDT 243

Query: 469 RGCLEPTEIFIQ 480
              L P ++ I 
Sbjct: 244 NDRLIPEKVNID 255



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 4/138 (2%)

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS-VYGFGWM 403
           V +WG+G  G LGHGD  D+ LP  LS+      V V      T     +G  VY +GW 
Sbjct: 70  VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG 129

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
            FG LG  D      +  P  + +L+   + QIS G  H + VT   ++  +G N+  +L
Sbjct: 130 DFGRLGHGD---PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 186

Query: 464 GHDTLRGCLEPTEIFIQE 481
           G  T +    P +I   E
Sbjct: 187 GLGTTKDSHVPQKILAFE 204


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 152/335 (45%), Gaps = 12/335 (3%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SE 173
           Q+  G+Y T  I  + SV +CG    G LG G  + Q +   RI        +  S  S+
Sbjct: 383 QVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLP-KRILLDCVVKKLSSSKGSD 441

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   + ++G V++ GD      GH +        R+     G   K + AG   +  +T
Sbjct: 442 GHTLALAETGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVT 501

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VVY 292
             G ++T G   HG+LGHGD+  R  P  +A L EVGSV   A G S+ L V+ +G  V+
Sbjct: 502 DDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAEVGSV---ACGSSHTLVVSKDGKTVW 558

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           SFGSG +  LG GE     +P+ ++    +G+ + +V AG    +AL ++G VYTWG G 
Sbjct: 559 SFGSGEHGKLGTGELGKVYRPQVVEAL--QGLTIQKVCAGTWFSMALTTAGEVYTWGSGA 616

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
               G  D I   LP  +  L  +  V + A       L D   V+ +G    G  G   
Sbjct: 617 ILGKGSADAI-VNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCG--Q 673

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
                 + RP  +  L    + QIS G  H++  T
Sbjct: 674 GHTCSPITRPLKVIGLEGVSIRQISAGTSHSMAWT 708



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 154/343 (44%), Gaps = 15/343 (4%)

Query: 115 MQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           MQ+ +G+Y    I +       SS   V        + ++   I+F      V+ + SE+
Sbjct: 285 MQLESGKYK---IKSDLWKGQTSSEVSVYEAAINLMEILAGMAIDFGGVCSAVE-TTSES 340

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
               V +   V+  G NSS      +  + I  P  V++      +QV AG   T  +  
Sbjct: 341 EVG-VYEKSDVYVWGSNSSHQLAEGNQEK-ILMP--VKSKMFTQVQQVEAGQYCTFAIHW 396

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V  CG  ++G+LG G++ ++  PK I     V  +        + LA+   GVVYS+
Sbjct: 397 DGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDGHTLALAETGVVYSW 456

Query: 295 GSGSNFCLGHGEQHDELQPRAIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           G G    LGHG      QP  I   F  K I  +   AG  H  A+   G +YTWG+G  
Sbjct: 457 GDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIH--AGYRHSAAVTDDGKLYTWGEGDH 514

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LGHGD   + +P  ++ L + +    C       V  D  +V+ FG    G LG  + 
Sbjct: 515 GRLGHGDSNARYVPTQVAGL-AEVGSVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGEL 573

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           G   KV RP+++++L+   + ++  G + ++ +T  G ++ +G
Sbjct: 574 G---KVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWG 613



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 157/366 (42%), Gaps = 24/366 (6%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 172
            +I  G+  T +I S+ +V +CG    G LG G  +    S + I+      +  ++ S  
Sbjct: 3361 KIICGQNCTFVIQSDGTVLACGEGSYGRLGQG-NSDDLHSLSVISSLQGFVITDLATSVG 3419

Query: 173  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             + H+  + +SG+VF+ GD      GH + +R   RPR +EAL+     QV  G   +  
Sbjct: 3420 SDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQ-RRPRQIEALQTEQVVQVACGFKHSAV 3478

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV- 290
            +T  G + T G+   G+LG G   ++  P+ +  LE    + Q+A G ++   V+ +G+ 
Sbjct: 3479 VTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGY-RIGQVACGLNHTACVSTDGMT 3537

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            V++FG G    LG G    +L P+ ++T    GI   +V  G    + L   G V+  G 
Sbjct: 3538 VWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIK--KVGCGTHLTLFLTKDGKVFVCGI 3595

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
                      E     P+ ++SL  +    +         L   G V G+G  G G LG 
Sbjct: 3596 DRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGL 3655

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-----------DRGRLFGFGDNE 459
            P   +   V  P I+  L    + QISTG  H+   +            R   FG   N 
Sbjct: 3656 PHVSL---VRHPEIITELSDKGIRQISTGRTHSAAWSAPPLPQRVPGVTRSLTFGLPANI 3712

Query: 460  RAQLGH 465
             +Q  H
Sbjct: 3713 PSQYDH 3718



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 120/240 (50%), Gaps = 8/240 (3%)

Query: 220  KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAA 277
            +++  G N T  +   G V  CG  ++G+LG G++ D  +   I+ L+   +  +     
Sbjct: 3360 RKIICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVG 3419

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
               + LA+  +G V+S+G G    LGHG    + +PR I+  + +   VV+V+ G +H  
Sbjct: 3420 SDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTE--QVVQVACGFKHSA 3477

Query: 338  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGS 396
             + S G ++T+G G  G LG G   +K LPE + +L+ +   QV C       V  D  +
Sbjct: 3478 VVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGYRIGQVACGLNHTACVSTDGMT 3537

Query: 397  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            V+ FG   +G LG    G +   L P+ ++++    + ++  G + T+ +T  G++F  G
Sbjct: 3538 VWTFGEGDYGKLGL---GYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCG 3594



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 13/236 (5%)

Query: 239  HTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            +  GS+ HGQL   G +   P       +E      +I  G +    +  +G V + G G
Sbjct: 3330 YMWGSDRHGQLAELGYSASVP-----VQVESFSIARKIICGQNCTFVIQSDGTVLACGEG 3384

Query: 298  SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGAL 356
            S   LG G   D      I + +   I  +  S G D H +AL  SG V++WG G  G L
Sbjct: 3385 SYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKL 3444

Query: 357  GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
            GHG+   +  P  + +L++   VQV    + + V+   G ++ FG   FG LG     V+
Sbjct: 3445 GHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGL--GSVA 3502

Query: 417  DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR---LFGFGDNERAQLGHDTLR 469
            +K L  R++ +L  + + Q++ GL HT  V+  G     FG GD  +  LG+ T++
Sbjct: 3503 NKKLPERVM-ALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMK 3557



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 11/190 (5%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   L P   + F +    V +V AG     A+   G V   GK
Sbjct: 350 VYVWGSNSSHQLAEGNQEKILMPVKSKMFTQ----VQQVEAGQYCTFAIHWDGSVSACGK 405

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK---TFVLVDTGSVYGFGWMGFGS 407
           G  G LG G+  +++LP+ +  L   +  ++ + K     T  L +TG VY +G   +G 
Sbjct: 406 GSYGRLGLGESSNQSLPKRI--LLDCVVKKLSSSKGSDGHTLALAETGVVYSWGDGDYGK 463

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  +     +    RI        +  I  G  H+  VTD G+L+ +G+ +  +LGH  
Sbjct: 464 LGHGNCATHKQ--PERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGD 521

Query: 468 LRGCLEPTEI 477
                 PT++
Sbjct: 522 SNARYVPTQV 531


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/234 (34%), Positives = 120/234 (51%), Gaps = 5/234 (2%)

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V +CG N+ GQLG   T     P+ I  LE +  V  ++ G  + LAV   G V+++G
Sbjct: 14  GTVQSCGDNSRGQLGRKGTPRGEQPERIPALETL-HVALVSCGKEHSLAVCHKGRVFAWG 72

Query: 296 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           + S   LG GE +     P+ I+T     I +++V+ G  H +AL   G V++WGK   G
Sbjct: 73  AASEGQLGIGELKETTFIPKKIKTL--ADIKIIQVACGHYHSLALSEDGQVFSWGKNSHG 130

Query: 355 ALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LG G E   +  P+ + SL+     QV A    +F L  +G+ +G+G    G L     
Sbjct: 131 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGN 190

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
               +  +P ++ +L+   V  IS G  HT V+T  G++F FGDN   QLGHD+
Sbjct: 191 NAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDS 244



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 146/290 (50%), Gaps = 14/290 (4%)

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           E+H+  +L  G V +CGDNS    G + T R   +P  + AL+ +    V+ G   +  +
Sbjct: 4   EHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGE-QPERIPALETLHVALVSCGKEHSLAV 62

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
             +G V   G+ + GQLG G+  +    PK I  L ++  ++Q+A G  + LA++ +G V
Sbjct: 63  CHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADI-KIIQVACGHYHSLALSEDGQV 121

Query: 292 YSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           +S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG  + WG 
Sbjct: 122 FSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSLSGTSFGWGS 179

Query: 351 GYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
              G L   G+   + +  P  + +LK+   V +      T VL   G V+ FG   +G 
Sbjct: 180 NNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQ 239

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 456
           LG      + +   P++++ +    VSQI  G YHT+  V   G++  FG
Sbjct: 240 LG---HDSTAEKRGPQLVERIEGL-VSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 9/288 (3%)

Query: 119 TGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSASENH 175
           +G +H+LL+ S+ +V SCG +  G LG    P   Q     RI      HV  VS  + H
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQP---ERIPALETLHVALVSCGKEH 58

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  V   G+VF  G  S    G  +     F P+ ++ L  +   QV  G   +  L+  
Sbjct: 59  SLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSED 118

Query: 236 GHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G  + +
Sbjct: 119 GQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGTSFGW 177

Query: 295 GSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           GS +   L     +  +Q  + +     K + VV +S G EH   L   G V+T+G    
Sbjct: 178 GSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSY 237

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G LGH    +K  P+ +  ++  ++   C        +  TG V  FG
Sbjct: 238 GQLGHDSTAEKRGPQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 82/208 (39%), Gaps = 49/208 (23%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q+  G YH+L +S +  VFS G +  G LG G E     S  R+       + QV+A  
Sbjct: 103 IQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 162

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI--FRPRLVEALKGVPCKQVTAGLNFTGF 231
            H+  +  SG  F  G N++        N P+  ++P LV ALK +    ++ G   T  
Sbjct: 163 AHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAV 222

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDR---------------------------------- 257
           LT  G V T G N++GQLGH  T ++                                  
Sbjct: 223 LTQDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGLVSQIDCGSYHTLAYVYTTGQVV 282

Query: 258 ------------PTPKSIAPLEEVGSVV 273
                       P P+++A   +V  ++
Sbjct: 283 SFGRGPGCTRSSPHPEALAESSDVSCLI 310


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 137/278 (49%), Gaps = 14/278 (5%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  E   G     V  GL  T FL   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKS--RKKPEHVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKG 323
            L+    +V ++ G S+ LA+   G V+S+G GSN  LG     + ++ PR I+      
Sbjct: 80  ALD-AQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCL--SD 136

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG---HGDEIDKTLPEPLSSLKSHLAVQ 380
           + + +V+ G  H  AL   G V++WG+   G LG   HG  I  + P+ + SL+     Q
Sbjct: 137 VQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSI--STPQIIQSLQGIPFAQ 194

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
           + A    +F +  +G+V+G+G   FG LG  D    D+   P +L SLR+  V  +S G 
Sbjct: 195 LSAGGAHSFAITLSGAVFGWGKNKFGQLGLND--TKDRWF-PALLKSLRSQRVIFVSCGE 251

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            HT  +T    +F FG     QLGH+     + P ++F
Sbjct: 252 DHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKVF 289



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 141/307 (45%), Gaps = 12/307 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R   F     V  V     H  F+L  G V+TCG N   
Sbjct: 5   GNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
             GH  + +   +P  V AL       V+ G + T  L  +G V + G  ++GQLG  + 
Sbjct: 65  QLGHEKSRK---KPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNF 121

Query: 255 LD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ- 312
            +    P++I  L +V  + Q+A G  +  A++  G V+S+G      LG G     +  
Sbjct: 122 EECVRVPRNIKCLSDV-QIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIST 180

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P+ IQ+   +GI   ++SAG  H  A+  SG V+ WGK   G LG  D  D+  P  L S
Sbjct: 181 PQIIQSL--QGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKS 238

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L+S   + V   +  T  L     V+ FG  G+G LG      ++  + PR +  L  + 
Sbjct: 239 LRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLG---HNCTNHEINPRKVFELMGNV 295

Query: 433 VSQISTG 439
           V+QIS G
Sbjct: 296 VTQISCG 302



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 13/272 (4%)

Query: 120 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           G  HT+ L+ + +V++CG +  G LGH     +      ++   A  +V VS  E+H   
Sbjct: 42  GLKHTVFLLDDGTVYTCGCNDLGQLGHEKSRKKPEHVVALD---AQIIVAVSCGESHTLA 98

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           +   GQVF+ G  S+   G  +    +  PR ++ L  V   QV  G   +  L+  G V
Sbjct: 99  LNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQV 158

Query: 239 HTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            + G N  GQLG   HG ++   TP+ I  L+ +    Q++AG ++  A+T +G V+ +G
Sbjct: 159 FSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGI-PFAQLSAGGAHSFAITLSGAVFGWG 215

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                 LG  +  D   P  +++ R +   V+ VS G++H  AL     V+T+G G  G 
Sbjct: 216 KNKFGQLGLNDTKDRWFPALLKSLRSQ--RVIFVSCGEDHTAALTKLRGVFTFGAGGYGQ 273

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQV-CARKR 386
           LGH     +  P  +  L  ++  Q+ C   R
Sbjct: 274 LGHNCTNHEINPRKVFELMGNVVTQISCGSTR 305


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 151/322 (46%), Gaps = 14/322 (4%)

Query: 129  NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVSASENHAAFVLQSGQV 185
            N  V++CG    G LG G   T  V       +        V V +   HA  +   G+V
Sbjct: 1883 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 1940

Query: 186  FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
            F+ G+      GH +    + +PRLVE L+    + V  G + +  ++ +G ++T G   
Sbjct: 1941 FSWGEGEDGKLGHGNRTT-LDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGE 1999

Query: 246  HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTGNGVVYSFGSGSNFCLG 303
            +G+LGHGD   +  PK +A L     V+Q+A G   +  LA+T +G V+S+G G    LG
Sbjct: 2000 YGRLGHGDNATQLKPKLVAALAGR-RVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLG 2058

Query: 304  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
             G       P  I+  R  GI V+++  G +  +AL  +G V+TWGKG    LGHG +  
Sbjct: 2059 RGGSEGSDTPHEIE--RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 2116

Query: 364  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
               P+P+  L+    + V         + D G VY +G    G  G  +  V+ K   P 
Sbjct: 2117 VRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK---PA 2173

Query: 424  ILDSLRAHHVSQISTGLYHTVV 445
            ++  L A  V++++ G  H++ 
Sbjct: 2174 LVIGLDAVFVNRVACGSSHSIA 2195



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 160/347 (46%), Gaps = 8/347 (2%)

Query: 130  SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
            S+++  G +  G LG G E ++  + T     S    VQ++  E     V   G++F  G
Sbjct: 2977 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 3035

Query: 190  DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
              S    G    +     P L+ +L+ V  K+V   +G      LT  G V+  G    G
Sbjct: 3036 YGSGGRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 3094

Query: 248  QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
            +LGHG+ +    PK +  L  + +V  IA G ++  A+T +G V ++G G    LGHG+ 
Sbjct: 3095 KLGHGNRMSYDRPKLVEHLNGM-NVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 3153

Query: 308  HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             D+L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP
Sbjct: 3154 EDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 3213

Query: 368  EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
              + SL     ++V    + +  L  +G+VY +    F  LG    G  D V RP+ + +
Sbjct: 3214 YKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLG---HGSVDHVRRPKKVAA 3270

Query: 428  LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            L+   +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 3271 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 3317



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 9/283 (3%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
            V V++   H   +   G+V+  G+      GH   NR  + RP+LVE L G+    +  G
Sbjct: 3067 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMNVADIACG 3124

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
               +  +T  GHV T G   +G+LGHGD+ D+  P+ +  L    ++ +   +G +  L 
Sbjct: 3125 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLC 3184

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +T +  V+S+G G    LG G       P  I++    G+ V++V  G +  VAL  SG 
Sbjct: 3185 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVIKVECGSQFSVALTKSGA 3242

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VYTW KG    LGHG       P+ +++L+    + +           D+G VY +G   
Sbjct: 3243 VYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 3302

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G LG    G    + RPR++ +L+  H+ +++ G  HT+ ++
Sbjct: 3303 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 3342



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 139/294 (47%), Gaps = 17/294 (5%)

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 234
             V Q+G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 1879 IVGQNGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 1936

Query: 235  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 1937 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVETLRSKKIRDVACGSSHSAAISSQGELY 1993

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 350
            ++G G    LGHG+   +L+P+ +      G  V++V+ G  D   +AL   G V++WG 
Sbjct: 1994 TWGLGEYGRLGHGDNATQLKPKLVAAL--AGRRVIQVACGSRDAQTLALTEDGSVFSWGD 2051

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  G LG G       P  +  L     +Q+    + +  L   G V+ +G   +  LG 
Sbjct: 2052 GDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 2110

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 2111 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2162



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 128/285 (44%), Gaps = 14/285 (4%)

Query: 113  NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
             ++ + +G  H L L +   V++ G    G LGHG      +S+ R   +   +  +V  
Sbjct: 3065 KKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMNVAD 3120

Query: 169  VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
            ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G   
Sbjct: 3121 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPQLVEALLGYRAIDIACGSGD 3179

Query: 229  TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
               L I    +V + G   +G+LG G +     P  I  L  +G V+++  G  + +A+T
Sbjct: 3180 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VIKVECGSQFSVALT 3238

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             +G VY++  G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG VY
Sbjct: 3239 KSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVY 3296

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            TWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 3297 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 3341



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 113/245 (46%), Gaps = 12/245 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V  NG VY+ 
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVGQNGKVYAC 1889

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 1890 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 1949

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+      P  + +L+S     V      +  +   G +Y +G   +G LG  D  
Sbjct: 1950 KLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNA 2009

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 2010 TQ---LKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSD 2066

Query: 473  EPTEI 477
             P EI
Sbjct: 2067 TPHEI 2071



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)

Query: 225  GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 281
             L++ G  TI G     G N  GQLG   G  +  PTP ++++ L  V    Q+A G   
Sbjct: 2970 ALSWGGASTIYG----WGHNHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 3021

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + AVT +G +++ G GS   LG G       P  + + +   +  V V++G +H +AL +
Sbjct: 3022 LFAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 3081

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G VY WG+G  G LGHG+ +    P+ +  L       +      +  +  +G V  +G
Sbjct: 3082 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWG 3141

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
               +G LG    G S+  LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +
Sbjct: 3142 KGRYGRLG---HGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 3198

Query: 460  RAQLGHDTLRGCLEPTEI 477
              +LG     GC  P +I
Sbjct: 3199 YGKLGRGGSDGCKLPYKI 3216



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D+  ++   +  +Y WG  + G LG  +      P P  +L     VQ+   ++  F + 
Sbjct: 2967 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 3026

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
              G ++     G+GS G    G +D    P +L SL+   V +++  +G  H + +T  G
Sbjct: 3027 PDGKLFA---TGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 3083

Query: 451  RLFGFGDNERAQLGH 465
             ++ +G+ E  +LGH
Sbjct: 3084 EVYAWGEGEDGKLGH 3098


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 157/338 (46%), Gaps = 17/338 (5%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQVS 170
            + I  G     ++S +  V++CG    G LG G   T  V       +        V V 
Sbjct: 2677 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVH 2734

Query: 171  ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 229
            +   HA  +   G+VF+ G+      GH   NR    +PRLVEAL+    + V  G + +
Sbjct: 2735 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 2792

Query: 230  GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 287
              ++ +G ++T G   +G+LGHGD   +  PK +  L     VVQ+A G   +  LA+T 
Sbjct: 2793 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR-RVVQVACGSRDAQTLALTE 2851

Query: 288  NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            +G V+S+G G    LG G       P  I+  R  GI VV++  G +  +AL  +G V+T
Sbjct: 2852 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 2909

Query: 348  WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
            WGKG    LGHG +     P+P+  L+    + V         + D G VY +G    G 
Sbjct: 2910 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 2969

Query: 408  LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             G  +  V+ K   P ++  L A  V++++ G  H++ 
Sbjct: 2970 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3004



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 17/294 (5%)

Query: 178  FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 234
             V Q G+V+ CG+ ++   G   T N P+  P  +  L     K+V   +G      LT+
Sbjct: 2688 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLHQYVVKKVAVHSGGKHALALTL 2745

Query: 235  RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
             G V + G    G+LGHG+  TLD+P    +        +  +A G S+  A++  G +Y
Sbjct: 2746 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 2802

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 350
            ++G G    LGHG+   +L+P+ +      G  VV+V+ G  D   +AL   G V++WG 
Sbjct: 2803 TWGLGEYGRLGHGDNTTQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 2860

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            G  G LG G       P  +  L     VQ+    + +  L   G V+ +G   +  LG 
Sbjct: 2861 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 2919

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G    V +P+ +  LR   V  ++ G  H + VTD G+++ +GDN+  Q G
Sbjct: 2920 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 2971



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 125/272 (45%), Gaps = 10/272 (3%)

Query: 100  VEHSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR- 157
            + H   ++      ++ + +G  H L ++ +  VFS G    G LGHG  TT  +   R 
Sbjct: 2716 LPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRL 2773

Query: 158  INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
            +    A  +  V+   +H+A +   G+++T G       GH D N    +P+LV AL G 
Sbjct: 2774 VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD-NTTQLKPKLVTALAGR 2832

Query: 218  PCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
               QV  G     T  LT  G V + G    G+LG G +    TP  I  L  +G VVQI
Sbjct: 2833 RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQI 2891

Query: 276  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
              G  + LA+T  G V+++G G  + LGHG      +P+ I   R  G  V+ V+ G  H
Sbjct: 2892 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALH 2949

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             +A+  +G VY WG    G  G G+      P
Sbjct: 2950 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 2981



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 15/269 (5%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            ++ G       GH DT+     P  + AL+    + V  G +++  +T  G++ T G  
Sbjct: 291 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 349

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
           T+ +LGHG++ DR  P  +  L +   V V + +G ++ LA+T  G+V+++G G    LG
Sbjct: 350 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 409

Query: 304 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
           +G  +  LQP  +++  R    V RV AG +  VAL S G +YTWGK  C  LGH   ++
Sbjct: 410 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQLYTWGKATC--LGH-QLVE 462

Query: 364 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           +     ++P  +SSL+    V V         L  +G V+G+G      +  P    S+ 
Sbjct: 463 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 521

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           +LR  IL SL     S I+     ++V T
Sbjct: 522 LLRTPILVSLPTFPASGIACTSAQSLVWT 550



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 12/245 (4%)

Query: 238  VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            V   G N   QLG   G  +  PT  ++I+ L  +     IA G   +  V+ +G VY+ 
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 2698

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G G+N  LG G  H+   P  +    +  +  V V +G +H +AL   G V++WG+G  G
Sbjct: 2699 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 2758

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LGHG+      P  + +L++     V      +  +   G +Y +G   +G LG  D  
Sbjct: 2759 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 2818

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGL--YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
                 L+P+++ +L    V Q++ G     T+ +T+ G +F +GD +  +LG     G  
Sbjct: 2819 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 2875

Query: 473  EPTEI 477
             P EI
Sbjct: 2876 TPHEI 2880



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)

Query: 231 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           FL I  +   ++ G+    +LGHGDT  R  P  IA LE+   V  +  G SY  A+T  
Sbjct: 282 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 340

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G + ++G G+   LGHG   D   P  +       +  V + +GD H +AL S G V+ W
Sbjct: 341 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 400

Query: 349 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           G G  G LG+G+    +   L E L  ++     +V A  + +  L   G +Y +G    
Sbjct: 401 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSVALSSEGQLYTWGKATC 455

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
                 +R V    + PR++ SL+   +  ++  + H + ++  G +FG+G N+  Q+
Sbjct: 456 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 512



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 5/142 (3%)

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H +A+DS+   Y+WG G    LGHGD   + +P  +++L+ H    V      +  +   
Sbjct: 281 HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCG 340

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRL 452
           G++  +G   +  LG    G SD    P ++ +L  H V  ++  +G  H++ +T  G +
Sbjct: 341 GNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLV 397

Query: 453 FGFGDNERAQLGHDTLRGCLEP 474
           F +GD +  +LG+    G L+P
Sbjct: 398 FAWGDGDYGKLGNGNCNGSLQP 419


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 166/366 (45%), Gaps = 20/366 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
            +++ GR HTL++ ++ +V + G +  G LG G  T +      ++ P    V  V++   
Sbjct: 763  RLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRT---GPVSVPGVPCVRSVASGIQ 819

Query: 175  HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
            H+  +   G V+  G N+    G   T  P   P LVE L+GV    + AG + +  L  
Sbjct: 820  HSLALACDGTVWAWGANARGQLGD-GTTTPRVTPGLVEGLRGVVA--LAAGGDASVALRA 876

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
             G V + G N  GQLG G   DR  P   A +E + + V +A G ++ LAV  +G ++++
Sbjct: 877  DGSVWSWGGNASGQLGDGTLTDRALP---AHVEHLSNAVAVAVGETHALAVGEDGALWAW 933

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G+  +  LG G     L P  ++   R    V  V+AG    VA+   G  + WG    G
Sbjct: 934  GANGSGQLGDGGTAPSLTPVRVKGLER----VASVAAGRAFSVAVRDDGTAWAWGTNPSG 989

Query: 355  ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             LG G    +++P  ++SLK   A+   A       L   G+V+ +G    G LG  D  
Sbjct: 990  QLGDGTNHARSVPNQVTSLKGIRAMSAGA--HHVVALSADGTVWTWGDNTLGQLG--DGS 1045

Query: 415  VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             S   + PR +  LR   V  ++ G   TV V   G    +G NE  QLG       L P
Sbjct: 1046 SSPTGMWPRQVPELRG--VEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGPQLTP 1103

Query: 475  TEIFIQ 480
              + I+
Sbjct: 1104 MAVKIE 1109



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 164/369 (44%), Gaps = 21/369 (5%)

Query: 113  NQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
            N + +  G  H L +  + ++++ G++  G LG G       S T +       V  V+A
Sbjct: 910  NAVAVAVGETHALAVGEDGALWAWGANGSGQLGDG---GTAPSLTPVRVKGLERVASVAA 966

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
                +  V   G  +  G N S   G   TN     P  V +LKG+  + ++AG +    
Sbjct: 967  GRAFSVAVRDDGTAWAWGTNPSGQLGD-GTNHARSVPNQVTSLKGI--RAMSAGAHHVVA 1023

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTGNG 289
            L+  G V T G NT GQLG G +    +P  + P  + E+  V  +AAG  + +AV  +G
Sbjct: 1024 LSADGTVWTWGDNTLGQLGDGSS----SPTGMWPRQVPELRGVEAVAAGEQFTVAVLLDG 1079

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTW 348
               ++GS     LG G+   +L P A++    K    VR V A  +H V   S G V TW
Sbjct: 1080 TARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTW 1139

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G    G LG G    + +P  +  L S +AV   A    +  L+  G+V+ +G  GFG L
Sbjct: 1140 GDNTFGQLGDGTTTRRAVPLTVYGLASVVAVSSGAWH--SLALLSDGTVWAWGANGFGQL 1197

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
            G    G S    RP  +  L    V  I +G YH + V   G ++ +G N   QLG  T 
Sbjct: 1198 G---DGTSTPRTRPVQVAGL--GDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTA 1252

Query: 469  RGCLEPTEI 477
                 PT +
Sbjct: 1253 ESRSLPTRV 1261



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 166/355 (46%), Gaps = 33/355 (9%)

Query: 117 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           + TG +H+L  + + SV++ G +  G LG G  T +  +  R+       V  V+++ +H
Sbjct: 414 MATGSFHSLAALGDGSVWAWGRNTYGQLGDG-STAERHAAVRVE--GLGGVRSVASAAHH 470

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           +  V   G V+  G N++   G     D  RP+  P L           V AG +    L
Sbjct: 471 SLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTS------VTAVAAGGSHVLAL 524

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   G N  GQLG G T+DR TP  ++ L   G+VV +AAG  + +A+  +G V+
Sbjct: 525 RSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSGL---GAVVAVAAGSYFSMALQSDGTVW 581

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G G    LG G     L P  ++       ++ RV+AG  H +A+   G V+ WG   
Sbjct: 582 TWGEGFEGQLGDGGGVQRLSPVRVEGL----ANITRVAAGSAHALAVRGDGTVWAWGDNG 637

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G   D+  P  +  L+   A  V   +  +  L   G+V  +G+ G+G LG  D
Sbjct: 638 EGQLGDGSWADRFRPVQVPGLQGITA--VSGGRSHSMALQGDGTVRAWGYNGYGQLG--D 693

Query: 413 RGVSDKVLRPRI---LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             ++ +V RP +   L  ++A H S +     H + +   G L G+G N   QLG
Sbjct: 694 GTLTSRV-RPALIPGLTGIQALHPSHL-----HVLALHADGTLRGWGYNRFGQLG 742



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 159/353 (45%), Gaps = 22/353 (6%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L+   +VF+ G++  G LG G  T +    T    P    V  V     HA  + + G +
Sbjct: 324 LLDTGAVFAWGANGSGQLGDGDTTDRA---TPGPVPGLNAVASVVGGAQHALVLRKDGTL 380

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           +  G   S   GH  + R +  P  V  L GV     T   +    L   G V   G NT
Sbjct: 381 WAWGGGLSGQLGHGGSERHVV-PAPVMRLAGV-TSMATGSFHSLAALG-DGSVWAWGRNT 437

Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           +GQLG G T +R    +   +E +G V  +A+   + LAV  +G V+++G  +   LG G
Sbjct: 438 YGQLGDGSTAER---HAAVRVEGLGGVRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDG 494

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
              D  +P A+         V  V+AG  HV+AL S G V+ WG    G LG G  +D+ 
Sbjct: 495 TTLDRARPVAVPGL----TSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRL 550

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRPRI 424
            P  +S L +   V V A    +  L   G+V+ +G  GF G LG    G   + L P  
Sbjct: 551 TPVRVSGLGA--VVAVAAGSYFSMALQSDGTVWTWG-EGFEGQLG---DGGGVQRLSPVR 604

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           ++ L   ++++++ G  H + V   G ++ +GDN   QLG  +      P ++
Sbjct: 605 VEGL--ANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQV 655



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 166/353 (47%), Gaps = 22/353 (6%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           M+I  G  H+L +S    V++ G +  G LG    + Q ++  R+   +  ++V V + +
Sbjct: 61  MRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRL--AALENIVSVVSGD 118

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  +   G V+T G NSS   G    T+R    P  V  L  V    V AG   +  L
Sbjct: 119 AHSLALGADGSVWTWGGNSSGQLGDGTTTDRAT--PMRVAGLDSVVA--VAAGDFHSLAL 174

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   G+N HGQLG G T    TP+ +  L     VV +AAG  + LAV  +G V 
Sbjct: 175 REDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLN---GVVALAAGFDFTLAVLEDGTVR 231

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++GS  +  LG G     L P  ++     GI  VR  AG  H +AL   G V+TWG   
Sbjct: 232 AWGSNGSGQLGDGTSTQRLSP--VKVSELSGITEVR--AGTYHALALGKDGGVWTWGSNA 287

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G   D+ +P  +  L+   A  V +    +  L+DTG+V+ +G  G G LG  D
Sbjct: 288 SGQLGDGTWNDRAVPMQVPGLERVKA--VASMDSDSLALLDTGAVFAWGANGSGQLGDGD 345

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              +D+   P  +  L A  V+ +  G  H +V+   G L+ +G     QLGH
Sbjct: 346 --TTDRAT-PGPVPGLNA--VASVVGGAQHALVLRKDGTLWAWGGGLSGQLGH 393



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 169/402 (42%), Gaps = 32/402 (7%)

Query: 87   NGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG 146
             G W R +  L+ VE        +AG Q  +        ++ + +  + GS+  G LG G
Sbjct: 1049 TGMWPRQVPELRGVE------AVAAGEQFTVA-------VLLDGTARAWGSNEYGQLGDG 1095

Query: 147  PETTQCVSFT-RINFPSAAHVVQ-VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 204
                Q      +I  P     V+ V A   HA   +  G V T GDN+    G   T R 
Sbjct: 1096 KTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRR 1155

Query: 205  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
               P  V  L  V    V++G   +  L   G V   G+N  GQLG G +  R  P  +A
Sbjct: 1156 AV-PLTVYGLASVVA--VSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVA 1212

Query: 265  PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
             L   G VV I +G  + LAV  +G V+++G  +   LG G       P  ++       
Sbjct: 1213 GL---GDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGLE---- 1265

Query: 325  HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
             VV V+ GD + +AL S G +  WG    G LG  D    T    ++       V V A 
Sbjct: 1266 GVVAVAGGDHYSLALHSDGTLSAWGNNASGQLG--DGTGTTRYSRVAVKGVDGVVDVRAG 1323

Query: 385  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               T  L   G+V+ +G   FG LG    G   +++ PR + +L +  VS +  G  HT 
Sbjct: 1324 ATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLV-PRPVPNLSS--VSAVGAGARHTF 1380

Query: 445  VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 486
             V  +G ++ +G N   QLG        EP  + ++E+ + T
Sbjct: 1381 AVALKGTVWTWGRNSHGQLGLGDNTNRTEP--LRVRELSDVT 1420



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 151/347 (43%), Gaps = 22/347 (6%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
            G++  + +S+ +V + G +  G LG G  T + V  T       A VV VS+   H+  +
Sbjct: 1124 GQHAVVQMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGL---ASVVAVSSGAWHSLAL 1180

Query: 180  LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
            L  G V+  G N     G   T+ P  RP  V  L  V    + +G      +   G V 
Sbjct: 1181 LSDGTVWAWGANGFGQLGD-GTSTPRTRPVQVAGLGDVVA--IGSGGYHALAVCSDGSVW 1237

Query: 240  TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            T G N  GQLG G    R  P  +  LE    VV +A G  Y LA+  +G + ++G+ ++
Sbjct: 1238 TWGYNAFGQLGDGTAESRSLPTRVEGLE---GVVAVAGGDHYSLALHSDGTLSAWGNNAS 1294

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
              LG G        R  +   +    VV V AG  H VAL   G V+TWG    G LG G
Sbjct: 1295 GQLGDGTG----TTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDG 1350

Query: 360  DEIDKT--LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
                +   +P P+ +L S  AV   AR   TF +   G+V+ +G    G LG  D     
Sbjct: 1351 ASGTRMRLVPRPVPNLSSVSAVGAGARH--TFAVALKGTVWTWGRNSHGQLGLGDNTNRT 1408

Query: 418  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + LR R L       V+ +S G   ++ +   G +  +G +    LG
Sbjct: 1409 EPLRVRELSD-----VTVVSGGADFSLAMKRDGTVLSWGSSLYGSLG 1450



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 147/353 (41%), Gaps = 23/353 (6%)

Query: 117  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            ++ G +H + +S + +V++ G +  G LG G  +   +   ++  P    V  V+A E  
Sbjct: 1014 MSAGAHHVVALSADGTVWTWGDNTLGQLGDGSSSPTGMWPRQV--PELRGVEAVAAGEQF 1071

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV----PCKQVTAGLNFTGF 231
               VL  G     G N     G   T  P   P  V+ ++G     P + V A       
Sbjct: 1072 TVAVLLDGTARAWGSNEYGQLGDGKTG-PQLTPMAVK-IEGPKIRPPVRTVRAWGQHAVV 1129

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
                G V T G NT GQLG G T  R  P ++  L    SVV +++G  + LA+  +G V
Sbjct: 1130 QMSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLA---SVVAVSSGAWHSLALLSDGTV 1186

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            +++G+     LG G      +P  +         VV + +G  H +A+ S G V+TWG  
Sbjct: 1187 WAWGANGFGQLGDGTSTPRTRPVQVAGLG----DVVAIGSGGYHALAVCSDGSVWTWGYN 1242

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
              G LG G    ++LP  +  L+    V V      +  L   G++  +G    G LG  
Sbjct: 1243 AFGQLGDGTAESRSLPTRVEGLEG--VVAVAGGDHYSLALHSDGTLSAWGNNASGQLGD- 1299

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                     R   +       V  +  G  HTV +   G ++ +GDN   QLG
Sbjct: 1300 ----GTGTTRYSRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLG 1348



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 25/304 (8%)

Query: 115  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
            + +++G +H+L L+S+ +V++ G++  G LG G  T +    TR +       VV + + 
Sbjct: 1168 VAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPR----TRPVQVAGLGDVVAIGSG 1223

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
              HA  V   G V+T G N+    G   T      P  VE L+GV    V  G +++  L
Sbjct: 1224 GYHALAVCSDGSVWTWGYNAFGQLGD-GTAESRSLPTRVEGLEGVVA--VAGGDHYSLAL 1280

Query: 233  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
               G +   G+N  GQLG G    R    S   ++ V  VV + AG ++ +A+ G+G V+
Sbjct: 1281 HSDGTLSAWGNNASGQLGDGTGTTR---YSRVAVKGVDGVVDVRAGATHTVALRGDGTVW 1337

Query: 293  SFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            ++G  +   LG G     ++  PR +         V  V AG  H  A+   G V+TWG+
Sbjct: 1338 TWGDNAFGQLGDGASGTRMRLVPRPVPNLS----SVSAVGAGARHTFAVALKGTVWTWGR 1393

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-----VCARKRKTFVLVDTGSVYGFGWMGF 405
               G LG GD  ++T P  +  L     V        A KR   VL    S+YG   +G 
Sbjct: 1394 NSHGQLGLGDNTNRTEPLRVRELSDVTVVSGGADFSLAMKRDGTVLSWGSSLYGS--LGL 1451

Query: 406  GSLG 409
            G+ G
Sbjct: 1452 GATG 1455



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 128/279 (45%), Gaps = 24/279 (8%)

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQI 275
            P  ++ AG   + +L+  G V   G N  GQLG  +T L    P  +A LE + SVV  
Sbjct: 58  APPMRIAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALENIVSVV-- 115

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDE 334
            +G ++ LA+  +G V+++G  S+  LG G   D   P      R  G+  VV V+AGD 
Sbjct: 116 -SGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATP-----MRVAGLDSVVAVAAGDF 169

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H +AL   G V+ WG  + G LG G       PE +  L     V + A    T  +++ 
Sbjct: 170 HSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGLNG--VVALAAGFDFTLAVLED 227

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G+V  +G  G G LG    G S + L P  +  L    ++++  G YH + +   G ++ 
Sbjct: 228 GTVRAWGSNGSGQLG---DGTSTQRLSPVKVSELSG--ITEVRAGTYHALALGKDGGVWT 282

Query: 455 FGDNERAQLGHDTLRGCLEPTEI-------FIQEMEEDT 486
           +G N   QLG  T      P ++        +  M+ D+
Sbjct: 283 WGSNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDS 321



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 151/361 (41%), Gaps = 25/361 (6%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H L L S+ SV++ G +  G LG G   T     T +       VV V+A    
Sbjct: 514 VAAGGSHVLALRSDGSVWAWGYNALGQLGDG---TTVDRLTPVRVSGLGAVVAVAAGSYF 570

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  +   G V+T G+      G     + +  P  VE L  +   +V AG      L +R
Sbjct: 571 SMALQSDGTVWTWGEGFEGQLGDGGGVQRL-SPVRVEGLANI--TRVAAGSAHA--LAVR 625

Query: 236 GH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           G   V   G N  GQLG G   DR  P  +  L+    +  ++ G S+ +A+ G+G V +
Sbjct: 626 GDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGLQ---GITAVSGGRSHSMALQGDGTVRA 682

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G      LG G     ++P  I      GI  +  S    HV+AL + G +  WG    
Sbjct: 683 WGYNGYGQLGDGTLTSRVRPALIPGL--TGIQALHPS--HLHVLALHADGTLRGWGYNRF 738

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G      +P  +  +      ++   +  T ++   G+V  +G  G G LG    
Sbjct: 739 GQLGLGAAGWSAVPVQVRGIGR--VDRLSVGRAHTLMVRADGTVMAWGENGSGQLG---D 793

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G S     P  +  +    V  +++G+ H++ +   G ++ +G N R QLG  T    + 
Sbjct: 794 GTSTHRTGPVSVPGVPC--VRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVT 851

Query: 474 P 474
           P
Sbjct: 852 P 852


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 157/351 (44%), Gaps = 19/351 (5%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT  ++ S  V+  G +  G LG G  T +         PS   V  ++A   H
Sbjct: 422 IAAGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPSG--VTAIAAGNYH 479

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 233
              +  SG V+  G N S   G    TNR    P  V  L  GV    + AG   T  L 
Sbjct: 480 TCALTSSGGVWCWGRNDSGQLGDGTTTNRST--PGAVGGLPSGV--TAIAAGDYHTCALM 535

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N  GQLG G   D  TP ++  L     V+ IAAG  +  A+TG+  V+ 
Sbjct: 536 SSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPS--GVMAIAAGNYHTCALTGSDGVWC 593

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+ S+  LG G   +   P A+         V  ++AG+ H  AL SSG V+ WG    
Sbjct: 594 WGTNSDGQLGDGTTTNRSTPVAVSGLPSG---VTAIAAGNYHTCALTSSGGVWCWGYNLS 650

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G   +++ P  +S L S +   + A    T  L  +G V+ +G   +G LG    
Sbjct: 651 GQLGDGTTTNRSTPGAVSGLPSGV-TAIAAGDEHTCALTGSGGVWCWGDNYYGQLG---D 706

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           G +     P  +  L +  V+ I+ G+YHT  +T  G +  +G+N   QLG
Sbjct: 707 GTTTNRSTPGAVSGLPSG-VTAIAAGVYHTCALTGSGGVMCWGNNGDGQLG 756



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 155/354 (43%), Gaps = 19/354 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  L S+  V   G +  G LG G  T +         PS   V  ++A   H
Sbjct: 116 IAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSG--VTAIAAGGAH 173

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLT 233
              ++ SG V+  G N S   G       I+    V A+ G+P +   + AG   T  LT
Sbjct: 174 TCALMSSGGVWCWGYNLS---GQLGDGSTIYHITPV-AVSGLPSEVTAIAAGYAHTCALT 229

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N  GQLG G   D  TP ++  L     V  IAAG  Y  A+T +G V+ 
Sbjct: 230 GSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPS--GVTAIAAGGRYTCALTSSGGVWC 287

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G   +  LG G   +   P A+         V  ++AG  H  AL SSG V+ WG    
Sbjct: 288 WGRNDSGQLGDGSFTNRSTPGAVGGLPSG---VTAIAAGGAHTCALTSSGGVWCWGGNDS 344

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G   D++ P  +S L S +   + A    T     +G V+ +G   +G LG  D 
Sbjct: 345 GQLGDGSYTDRSTPGAVSGLPSGV-TAIAAGGAHTCARTSSGGVWCWGGNFYGQLG--DG 401

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
             +D+   P  +  L +  V+ I+ G YHT  +T    ++ +GDN   QLG  T
Sbjct: 402 TTTDRS-TPGAVSGLPS-GVTAIAAGNYHTCALTGSDGVWCWGDNFYGQLGDGT 453



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 155/353 (43%), Gaps = 24/353 (6%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GRY   L S+  V+  G +  G LG G  T +         PS   V  ++A   H   +
Sbjct: 273 GRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSG--VTAIAAGGAHTCAL 330

Query: 180 LQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPC--KQVTAGLNFTGFLTI 234
             SG V+  G N S   G   + D + P        A+ G+P     + AG   T   T 
Sbjct: 331 TSSGGVWCWGGNDSGQLGDGSYTDRSTP-------GAVSGLPSGVTAIAAGGAHTCARTS 383

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N +GQLG G T DR TP +++ L     V  IAAG  +  A+TG+  V+ +
Sbjct: 384 SGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPS--GVTAIAAGNYHTCALTGSDGVWCW 441

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      LG G   +   P A+         V  ++AG+ H  AL SSG V+ WG+   G
Sbjct: 442 GDNFYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGNYHTCALTSSGGVWCWGRNDSG 498

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG G   +++ P  +  L S +   + A    T  L+ +G V+ +G    G LG  D  
Sbjct: 499 QLGDGTTTNRSTPGAVGGLPSGV-TAIAAGDYHTCALMSSGGVWCWGLNNRGQLG--DGS 555

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
            +D    P  +  L +  V  I+ G YHT  +T    ++ +G N   QLG  T
Sbjct: 556 YTDSS-TPVAVGGLPS-GVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGT 606



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 152/354 (42%), Gaps = 19/354 (5%)

Query: 117 ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT    S+  V+  G +  G LG G  T +         PS   V  ++A   H
Sbjct: 371 IAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSG--VTAIAAGNYH 428

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 233
              +  S  V+  GDN     G    TNR    P  V  L  GV    + AG   T  LT
Sbjct: 429 TCALTGSDGVWCWGDNFYGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGNYHTCALT 484

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N  GQLG G T +R TP ++  L     V  IAAG  +  A+  +G V+ 
Sbjct: 485 SSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPS--GVTAIAAGDYHTCALMSSGGVWC 542

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G  +   LG G   D   P A+         V+ ++AG+ H  AL  S  V+ WG    
Sbjct: 543 WGLNNRGQLGDGSYTDSSTPVAVGGLPSG---VMAIAAGNYHTCALTGSDGVWCWGTNSD 599

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G   +++ P  +S L S +   + A    T  L  +G V+ +G+   G LG    
Sbjct: 600 GQLGDGTTTNRSTPVAVSGLPSGV-TAIAAGNYHTCALTSSGGVWCWGYNLSGQLG---D 655

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           G +     P  +  L +  V+ I+ G  HT  +T  G ++ +GDN   QLG  T
Sbjct: 656 GTTTNRSTPGAVSGLPSG-VTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGT 708



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 152/354 (42%), Gaps = 19/354 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  L S+  V+  G +  G LG G  T +         PS   V  ++A   H
Sbjct: 320 IAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSG--VTAIAAGGAH 377

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 233
                 SG V+  G N     G    T+R    P  V  L  GV    + AG   T  LT
Sbjct: 378 TCARTSSGGVWCWGGNFYGQLGDGTTTDRST--PGAVSGLPSGV--TAIAAGNYHTCALT 433

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
               V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+T +G V+ 
Sbjct: 434 GSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGNYHTCALTSSGGVWC 491

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G   +  LG G   +   P A+         V  ++AGD H  AL SSG V+ WG    
Sbjct: 492 WGRNDSGQLGDGTTTNRSTPGAVGGLPSG---VTAIAAGDYHTCALMSSGGVWCWGLNNR 548

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G   D + P  +  L S + + + A    T  L  +  V+ +G    G LG    
Sbjct: 549 GQLGDGSYTDSSTPVAVGGLPSGV-MAIAAGNYHTCALTGSDGVWCWGTNSDGQLG---D 604

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           G +     P  +  L +  V+ I+ G YHT  +T  G ++ +G N   QLG  T
Sbjct: 605 GTTTNRSTPVAVSGLPSG-VTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGT 657



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 116/251 (46%), Gaps = 12/251 (4%)

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           L+GV    + AG   T  LT  G V   G N  GQLG G   DR TP +++ L     V 
Sbjct: 59  LQGV--TAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPS--GVT 114

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            IAAG ++  A+T +G V  +G      LG G   D   P A+         V  ++AG 
Sbjct: 115 AIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSG---VTAIAAGG 171

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
            H  AL SSG V+ WG    G LG G  I    P  +S L S +   + A    T  L  
Sbjct: 172 AHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEV-TAIAAGYAHTCALTG 230

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +G V+ +G  GFG LG  D   +D    P  +  L +  V+ I+ G  +T  +T  G ++
Sbjct: 231 SGGVWCWGDNGFGQLG--DGSFTDSS-TPAAVGGLPS-GVTAIAAGGRYTCALTSSGGVW 286

Query: 454 GFGDNERAQLG 464
            +G N+  QLG
Sbjct: 287 CWGRNDSGQLG 297



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 101/217 (46%), Gaps = 11/217 (5%)

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            S +PL+    V  IAAG  +  A+TG+G V+ +G   +  LG G   D   P A+    
Sbjct: 54  SSFSPLQ---GVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLP 110

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
                V  ++AG  H  AL SSG V  WG  Y G LG G   D++ P  +S L S +   
Sbjct: 111 SG---VTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSGV-TA 166

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
           + A    T  L+ +G V+ +G+   G LG    G +   + P  +  L +  V+ I+ G 
Sbjct: 167 IAAGGAHTCALMSSGGVWCWGYNLSGQLG---DGSTIYHITPVAVSGLPS-EVTAIAAGY 222

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            HT  +T  G ++ +GDN   QLG  +      P  +
Sbjct: 223 AHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAV 259



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 110/254 (43%), Gaps = 14/254 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT  L+S+  V+  G +  G LG G  T           PS   V+ ++A   H
Sbjct: 524 IAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSG--VMAIAAGNYH 581

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 233
              +  S  V+  G NS    G    TNR    P  V  L  GV    + AG   T  LT
Sbjct: 582 TCALTGSDGVWCWGTNSDGQLGDGTTTNRST--PVAVSGLPSGV--TAIAAGNYHTCALT 637

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N  GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G V+ 
Sbjct: 638 SSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGDEHTCALTGSGGVWC 695

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G      LG G   +   P A+         V  ++AG  H  AL  SG V  WG    
Sbjct: 696 WGDNYYGQLGDGTTTNRSTPGAVSGLPSG---VTAIAAGVYHTCALTGSGGVMCWGNNGD 752

Query: 354 GALGHGDEIDKTLP 367
           G LG G  + +T P
Sbjct: 753 GQLGDGRPLYRTTP 766



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 97/218 (44%), Gaps = 11/218 (5%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           M I  G YHT  ++ S  V+  G++  G LG G  T +         PS   V  ++A  
Sbjct: 573 MAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSG--VTAIAAGN 630

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGF 231
            H   +  SG V+  G N S   G    TNR    P  V  L  GV    + AG   T  
Sbjct: 631 YHTCALTSSGGVWCWGYNLSGQLGDGTTTNRST--PGAVSGLPSGV--TAIAAGDEHTCA 686

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT  G V   G N +GQLG G T +R TP +++ L     V  IAAG  +  A+TG+G V
Sbjct: 687 LTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPS--GVTAIAAGVYHTCALTGSGGV 744

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
             +G+  +  LG G       P  + T    G+++  +
Sbjct: 745 MCWGNNGDGQLGDGRPLYRTTPVDVVTSASWGVYLPMI 782


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 170/349 (48%), Gaps = 19/349 (5%)

Query: 107 VETSAGNQM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           VE  +G ++  +  G   T  IS +  V++ GS   G LGH  ++ + +    +      
Sbjct: 85  VEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLP-RLVEALKGK 143

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVT 223
           ++V+VS   NH A + + G ++  G  +S   G  +    +F PRL++  L+      V+
Sbjct: 144 NIVKVSIGGNHMAAIDKDGHLYCWGRAASAGSGGTEH---VFIPRLIKGDLEKEKVISVS 200

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  +T +G V T G+   G+LGHG+   +  PK +  L E   VV +A G  + +
Sbjct: 201 CGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLTE--KVVDVACGRDFTI 258

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSS 342
            V  +G+ YS G+     LG G  H E   +  ++    G+  VV +SAGD HV AL   
Sbjct: 259 FVCESGL-YSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRD 317

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G VYTWG G  G LGHG++ D +L +P+ +L++   VQV      T  +   G +Y +G 
Sbjct: 318 GLVYTWGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGR 377

Query: 403 MGFGSLGFPDRG-----VSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              G LG   RG     ++     P  + SL A  V  ++ G  H+ V+
Sbjct: 378 GRDGQLG---RGGELESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVL 423



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 125/269 (46%), Gaps = 6/269 (2%)

Query: 203 RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 262
           RP  RP  VEAL G     V AG + T  +++ G V+T GS  +G+LGH D  +   P+ 
Sbjct: 77  RPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRL 136

Query: 263 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           +  L+   ++V+++ G ++M A+  +G +Y +G  ++   G G       PR I+    K
Sbjct: 137 VEALKGK-NIVKVSIGGNHMAAIDKDGHLYCWGRAAS--AGSGGTEHVFIPRLIKGDLEK 193

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
              V+ VS G  H  A+   G V+TWG GY G LGHG++  +  P+ + SL   +    C
Sbjct: 194 -EKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLTEKVVDVAC 252

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
            R    FV      +Y  G   +G LG         V  PR L       V  IS G YH
Sbjct: 253 GRDFTIFVC--ESGLYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYH 310

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
              +   G ++ +G     QLGH     C
Sbjct: 311 VCALGRDGLVYTWGLGREGQLGHGEKADC 339



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 160/349 (45%), Gaps = 17/349 (4%)

Query: 121 RYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           R     + N ++ +  G +L G LG G E      F  +   S   +V V+A ++  A +
Sbjct: 48  RMKKAALENGTLLTTFGLNLIGQLGQGHERPADRPFP-VEALSGKRIVYVAAGDSCTAAI 106

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              G V+T G       GH D +     PRLVEALKG    +V+ G N    +   GH++
Sbjct: 107 SLDGDVYTWGSGEYGKLGHNDDSNENL-PRLVEALKGKNIVKVSIGGNHMAAIDKDGHLY 165

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
             G       G G T     P+ I    E   V+ ++ G S+  AVT  G V+++G+G  
Sbjct: 166 CWGRAA--SAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYE 223

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 357
             LGHGE++ + QP+ +Q+   K   VV V+ G +  + +  SG +Y+ G    G LG  
Sbjct: 224 GELGHGEKNSQYQPKKVQSLTEK---VVDVACGRDFTIFVCESG-LYSCGADDYGQLGLG 279

Query: 358 --HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
             HG+   +T P  LS       V + A       L   G VY +G    G LG  ++  
Sbjct: 280 RSHGERFVQT-PRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEK-- 336

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +D  L  + +D+LR   + Q++ G  HT  VT  G L+ +G     QLG
Sbjct: 337 ADCSL-AKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLG 384



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 8/177 (4%)

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LG G +    +P  ++     G  +V V+AGD    A+   G VYTWG G  G LGH D+
Sbjct: 71  LGQGHERPADRPFPVEAL--SGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDD 128

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
            ++ LP  + +LK    V+V         +   G +Y      +G       G ++ V  
Sbjct: 129 SNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLY-----CWGRAASAGSGGTEHVFI 183

Query: 422 PRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           PR++   L    V  +S G  HT  VT++G ++ +G+    +LGH       +P ++
Sbjct: 184 PRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKV 240


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 142/311 (45%), Gaps = 18/311 (5%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            + ++    H A V + G+VFT G+ +    GH      + RP+LVE L       V  G 
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGH-GIQVDVSRPKLVEFLALTNIDFVACGE 1142

Query: 227  NFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +   
Sbjct: 1143 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSAL 1202

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 339
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+     
Sbjct: 1203 ATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTMKVACGVWHTVAIVEVMN 1260

Query: 340  -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  +
Sbjct: 1261 QTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTLTVALTTS 1320

Query: 395  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
            G V+  G    G LG  +   SD  L   + D L    V +IS G +H  V+T R  +F 
Sbjct: 1321 GHVFTMGGTSHGQLGSSN---SDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFT 1377

Query: 455  FGDNERAQLGH 465
            +G     +LGH
Sbjct: 1378 WGKGSNGRLGH 1388



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 135/282 (47%), Gaps = 20/282 (7%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
            +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 1138 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 1196

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 225
              H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 1197 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTMKVACGVWHTVAI 1255

Query: 226  ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
               +N TG       + T G     +LGHG+      P  ++ L +  +  QIA G +  
Sbjct: 1256 VEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFQQIACGHTLT 1314

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 1315 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 1372

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCA 383
              V+TWGKG  G LGHGD+ D+  P  + +LK  H+    CA
Sbjct: 1373 SEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKERHVKSISCA 1414



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 80/207 (38%), Gaps = 58/207 (28%)

Query: 273  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            + IA G  ++  VT  G V+++G  +   LGHG Q D  +P+ ++      I  V  + G
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFV--ACG 1141

Query: 333  DEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
            + H  A+ +SG ++TWG G    G LGHG ++   +P+ +S                   
Sbjct: 1142 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVS------------------- 1182

Query: 391  LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
                G V G                                 V  ++ G +H+ + T  G
Sbjct: 1183 ----GPVEGL-------------------------------QVLSVACGTWHSALATANG 1207

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +LF FGD     LGH        P E+
Sbjct: 1208 KLFTFGDGAFGVLGHGDRESVSYPKEV 1234


>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
 gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
          Length = 1205

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 181/396 (45%), Gaps = 45/396 (11%)

Query: 93  VLRFLQSVEHSSDIV----ETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP 147
           +L  LQ+V   SD V     T +G +M    G  HTL L +N +V++ G    G LG+G 
Sbjct: 17  LLLPLQAVADESDSVVAAKSTYSGIRM-AAGGESHTLALNANGTVWAWGG---GQLGNGS 72

Query: 148 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRP 204
            T         +  S   V  ++A  +H   +   G V+  G N     G   T   N P
Sbjct: 73  TTGSPAPVQVQDLHS---VEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTP 129

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKS 262
           +     VE L+ +    V A  ++   L ++  G V   G N +GQLG G   DR TP  
Sbjct: 130 V----QVEGLRSI----VGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPVR 181

Query: 263 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           +  L+   SVV I++G  Y LAV  +G V+++G      LG+G       P  +Q     
Sbjct: 182 VKGLD---SVVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSAPVQVQ----- 233

Query: 323 GIH-VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           G+H V  V++GD H +A+   G V++WG    G LG G ++D+  P  +    S  AV V
Sbjct: 234 GLHSVTAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMDRYTPVQVEGFSS--AVDV 291

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
            A    +  L   G+V+ +G   F   GF     S   ++ + LDS     V  I+ G  
Sbjct: 292 DAGFGHSLALKSDGTVWAWGNYQFNEWGFG----SSTPVQVQELDS-----VVDIAAGTQ 342

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           H++ V + G ++ +G N+  QLG  T    L P ++
Sbjct: 343 HSLAVRNDGTVWAWGKNDNGQLGDGTSTARLTPIKV 378



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 16/207 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I++G  ++L + S+ +V++ G +  G LG+G  TTQ  +  ++       V  V++ +
Sbjct: 189 VAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNG-STTQSSAPVQVQ--GLHSVTAVASGD 245

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H   + + G V++ G N +   G   D +R  + P  VE         V AG   +  L
Sbjct: 246 YHNLAIKRDGTVWSWGPNLAGQLGDGSDMDR--YTPVQVEGFSS--AVDVDAGFGHSLAL 301

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   G+    + G G +    TP  +   +E+ SVV IAAG  + LAV  +G V+
Sbjct: 302 KSDGTVWAWGNYQFNEWGFGSS----TPVQV---QELDSVVDIAAGTQHSLAVRNDGTVW 354

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTF 319
           ++G   N  LG G     L P  +Q F
Sbjct: 355 AWGKNDNGQLGDGTSTARLTPIKVQGF 381


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 147/323 (45%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H A   + G+VF  G+      GH  T+  I RP+LVEAL     + V  G
Sbjct: 245 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGH-GTDADISRPKLVEALAVSNVEYVACG 303

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++T G   +  G LGHG       PK ++ PLE V  V+ ++ G  + 
Sbjct: 304 EFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGV-QVLSVSCGSWHS 362

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 341
              T +G V++FG G+   LGHG +H    P+ ++T    G   ++V+ G  H  A+   
Sbjct: 363 ALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETL--SGFRTIKVACGLWHSAAIVET 420

Query: 342 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                    S  ++TWG G    LGHGD+  + +P  + SL  +   QV      T  L 
Sbjct: 421 TNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGHSMTIALS 480

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G    G LG P    SD      + D L    V +IS G  H  V+T R  +
Sbjct: 481 TSGHVFTMGSSSNGQLGNPK---SDGKHPTPVQDRLAGELVEEISCGSCHVAVLTSRSEV 537

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH  +    +PT
Sbjct: 538 YTWGMGANGRLGHGGVEDKKKPT 560



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 141/303 (46%), Gaps = 21/303 (6%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP 161
           +VE  A + ++ +  G +HT  I+ S  +++ G      G+LGHG  T+  +   R++ P
Sbjct: 288 LVEALAVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLP-KRVSGP 346

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V+ VS    H+A    SG+VFT GD +    GH + +   + P+ VE L G    
Sbjct: 347 LEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAY-PKEVETLSGFRTI 405

Query: 221 QVTAGL----------NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           +V  GL          N  G   I   + T G+     LGHGD   R  P  +  L +  
Sbjct: 406 KVACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDY- 464

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           +  Q+A G S  +A++ +G V++ GS SN  LG+  + D   P  +Q  R  G  V  +S
Sbjct: 465 NFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGN-PKSDGKHPTPVQD-RLAGELVEEIS 522

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTF 389
            G  HV  L S   VYTWG G  G LGHG   DK  P  + +LK  H+    C     T 
Sbjct: 523 CGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTC 582

Query: 390 VLV 392
           + +
Sbjct: 583 ICI 585



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 17/285 (5%)

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           ++++ C   D    I  P+ +E+   +  +Q+  G       T +G V   G    G+LG
Sbjct: 221 SANYLCSKAD----ILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLG 276

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQH 308
           HG   D   PK +  L  V +V  +A G  +  A+T +G +Y++G G  +   LGHG   
Sbjct: 277 HGTDADISRPKLVEAL-AVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGT 335

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
               P+ + +   +G+ V+ VS G  H     SSG V+T+G G  GALGHG+      P+
Sbjct: 336 SHWLPKRV-SGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPK 394

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVL 420
            + +L     ++V      +  +V+T +  G        F W G G       G  D  L
Sbjct: 395 EVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVISRKLFTW-GAGDKNPLGHGDKDARL 453

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            P  + SL  ++  Q++ G   T+ ++  G +F  G +   QLG+
Sbjct: 454 VPTCVQSLIDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGN 498



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 152/346 (43%), Gaps = 24/346 (6%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 173
           QI  G  H  L +    VF+ G  L G LGHG  T   +S  + +   + ++V  V+  E
Sbjct: 247 QIACGYRHIALTTRQGEVFAWGEELGGRLGHG--TDADISRPKLVEALAVSNVEYVACGE 304

Query: 174 NHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H   +  SG ++T GD   ++   GH          R+   L+GV    V+ G   +  
Sbjct: 305 FHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSAL 364

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV------ 285
            T  G V T G  T G LGHG+      PK +  L      +++A G  +  A+      
Sbjct: 365 TTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGF-RTIKVACGLWHSAAIVETTNQ 423

Query: 286 TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            G  V+    +++G+G    LGHG++   L P  +Q+      H  +V+ G    +AL +
Sbjct: 424 AGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFH--QVACGHSMTIALST 481

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           SG+V+T G    G LG+  + D   P P+   L   L  ++        VL     VY +
Sbjct: 482 SGHVFTMGSSSNGQLGN-PKSDGKHPTPVQDRLAGELVEEISCGSCHVAVLTSRSEVYTW 540

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           G    G LG    GV DK  +P ++++L+  HV  I+ G   T  +
Sbjct: 541 GMGANGRLGHG--GVEDKK-KPTLVEALKDRHVKSIACGSNFTTCI 583



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 8/201 (3%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  Y+       ++ + GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 203 GDVYVWGEVWTDMIPAEGSANYLC----SKADILIPKPLES--DVVLDVQQIACGYRHIA 256

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
                G V+ WG+   G LGHG + D + P+ + +L       V   +  T  +  +G +
Sbjct: 257 LTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFHTCAITASGDL 316

Query: 398 YGFGWMGFGSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           Y +G  G+ + G    G  +   L  R+   L    V  +S G +H+ + T  G++F FG
Sbjct: 317 YTWG-DGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFG 375

Query: 457 DNERAQLGHDTLRGCLEPTEI 477
           D     LGH        P E+
Sbjct: 376 DGTFGALGHGNRHTVAYPKEV 396


>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
 gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
          Length = 897

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 157/319 (49%), Gaps = 16/319 (5%)

Query: 132 VFSCGSSLCGVLGHGPETTQCV-SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +F+ G ++ G LG G     C+   T ++  +   +  +S   NH   +LQ GQ+++CG 
Sbjct: 1   MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGS 60

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA-GLNFTGFLTIRGHVHTCGSNTHGQL 249
           N     G +  N+   R   ++A + +    V++ G N    +  +  ++  G N+ GQL
Sbjct: 61  NDYGQTGRQRNNKRFAR---IDAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQL 117

Query: 250 GHGDTLDRP---TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           G  D   +    TP+ I  L +  +VVQ+A G S+ LAV  +G V+S+GS     LG   
Sbjct: 118 GVTDQNLKQFYRTPRQIKSLSKF-AVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS 176

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
               ++P+  Q  +  G ++V+++AG  H +A+ +SG + TWGK   G LG G       
Sbjct: 177 NVSSVEPK--QILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVLS 234

Query: 367 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
           P  +SSL+S H+A   C     T VL   G V+ FG    G LG     +S     P+++
Sbjct: 235 PTCVSSLRSQHIAYAACGEDH-TAVLTKEGGVFTFGAGSSGQLG--HNSLSHHC-SPQMV 290

Query: 426 DSLRAHHVSQISTGLYHTV 444
             L    V+QI+ G ++ +
Sbjct: 291 VDLMGIVVTQITCGRFYAL 309



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 10/252 (3%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           K ++ GLN T  L   G +++CGSN +GQ G      R     I   E +      + G 
Sbjct: 37  KLISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKRFA--RIDAFESMRITNVSSNGA 94

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL---QPRAIQTFRRKGIHVVRVSAGDEHV 336
           ++ LA+     +Y++G  S+  LG  +Q+ +     PR I++  +    VV+V+ G  H 
Sbjct: 95  NHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSK--FAVVQVACGQSHS 152

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
           +A+ + G V++WG    G LG    +    P+ +  L     VQ+ A    +  + ++G+
Sbjct: 153 LAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGA 212

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           +  +G   FG LG    G +D VL P  + SLR+ H++  + G  HT V+T  G +F FG
Sbjct: 213 LLTWGKNSFGQLGL---GTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFG 269

Query: 457 DNERAQLGHDTL 468
                QLGH++L
Sbjct: 270 AGSSGQLGHNSL 281



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 127/273 (46%), Gaps = 11/273 (4%)

Query: 117 ITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-EN 174
           I+ G  HT LL+ +  ++SCGS+  G  G      +   F RI+   +  +  VS++  N
Sbjct: 39  ISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKR---FARIDAFESMRITNVSSNGAN 95

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTGFL 232
           H   +     ++  GDNS    G  D N   F   PR +++L      QV  G + +  +
Sbjct: 96  HNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAV 155

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V + GSN +GQLG    +    PK I  L     +VQIAAG ++ LA+T +G + 
Sbjct: 156 INDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGF-YIVQIAAGGAHSLAITNSGALL 214

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  S   LG G     L P  + + R +  H+   + G++H   L   G V+T+G G 
Sbjct: 215 TWGKNSFGQLGLGTNDGVLSPTCVSSLRSQ--HIAYAACGEDHTAVLTKEGGVFTFGAGS 272

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CAR 384
            G LGH        P+ +  L   +  Q+ C R
Sbjct: 273 SGQLGHNSLSHHCSPQMVVDLMGIVVTQITCGR 305



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 10/238 (4%)

Query: 242 GSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           G    GQLG G   +    K+    L    ++  I+ G ++ + +  +G +YS   GSN 
Sbjct: 5   GKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYS--CGSND 62

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
               G Q +  +   I  F    I  V  S G  H +A++    +Y WG    G LG  D
Sbjct: 63  YGQTGRQRNNKRFARIDAFESMRITNVS-SNGANHNLAINDKNCIYAWGDNSDGQLGVTD 121

Query: 361 EIDKTL---PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           +  K     P  + SL     VQV   +  +  +++ G+V+ +G   +G LG  D  VS 
Sbjct: 122 QNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGI-DSNVSS 180

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             + P+ +  L   ++ QI+ G  H++ +T+ G L  +G N   QLG  T  G L PT
Sbjct: 181 --VEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVLSPT 236



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 4/156 (2%)

Query: 325 HVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           H ++ +S G  H + L   G +Y+ G    G  G   + +      + + +S     V +
Sbjct: 34  HTIKLISCGLNHTILLLQDGQIYSCGSNDYGQTGR--QRNNKRFARIDAFESMRITNVSS 91

Query: 384 R-KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                   + D   +Y +G    G LG  D+ +      PR + SL    V Q++ G  H
Sbjct: 92  NGANHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSH 151

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           ++ V + G +F +G N   QLG D+    +EP +I 
Sbjct: 152 SLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQIL 187


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 175/355 (49%), Gaps = 25/355 (7%)

Query: 125 LLISNSSVFSCGSSLCGVLGHGPETTQCV-SFTRI-NFPSAAHVVQVSASENHAAFVLQS 182
           L++ + S+  CG++  G LG G    + V S T + +  +   + Q++   +H+  +L  
Sbjct: 11  LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDD 70

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCKQVTAGLNFTGF---------L 232
           G VF+CG+N  +  GH    R   +P L E L   +  KQ   G++             L
Sbjct: 71  GSVFSCGNNDFYQLGHDGIKR---KPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVAL 127

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAV-TGNG 289
           T  GH+ + GSN +GQLG  + ++         ++E+   ++VQIA G ++ LA+ + +G
Sbjct: 128 TNDGHLFSWGSNVYGQLG-VERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDG 186

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
           V++++G   +  LG G +   + P  +   +  GI + +++AG  H + L  SG V+ WG
Sbjct: 187 VLHAWGLNDHGQLGIGTRESFIGPTTVN--KLMGIPICQLAAGASHSLVLTPSGTVFGWG 244

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           K   G +G  ++ D   P  +  L++   +++   +  +  +  TG ++ FG   +G LG
Sbjct: 245 KNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLG 304

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G  +  L P+ +  L    V  ++ G  HT+ +T+  +L+ FG N   QLG
Sbjct: 305 ---HGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITE-NKLYAFGLNTSGQLG 355



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 154/328 (46%), Gaps = 21/328 (6%)

Query: 94  LRFLQSVEHSSDIVETSAGNQMQITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQC 152
           +R L  VE + + ++       QI  GR+H+ +L+ + SVFSCG++    LGH     + 
Sbjct: 39  VRSLTLVESTKNFLKIR-----QIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDGIKRKP 93

Query: 153 VSFTRINFP-------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN--R 203
             +  +++           HV+ V+  + H   +   G +F+ G N     G    N   
Sbjct: 94  NLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVERMNVVA 153

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 262
               PR+ E +      Q+  G N +  L +  G +H  G N HGQLG G       P +
Sbjct: 154 KARYPRIQE-INLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIGPTT 212

Query: 263 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           +  L  +  + Q+AAG S+ L +T +G V+ +G      +G  EQ D L P  ++  R +
Sbjct: 213 VNKLMGI-PICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQ 271

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
              V+R++ G++  VA+ ++G ++T+G G  G LGHG++  +  P+ +  L   + + V 
Sbjct: 272 --KVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVA 329

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
             +  T  + +   +Y FG    G LG 
Sbjct: 330 CGRCHTLAITEN-KLYAFGLNTSGQLGL 356



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 16/261 (6%)

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV---QIAAGPSYMLAVTGNGVVYSFGSG 297
           CG+ + GQLG G   +    +S+  +E   + +   QIA G  + + +  +G V+S G+ 
Sbjct: 21  CGNTSDGQLGLGGIAEENV-RSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNN 79

Query: 298 SNFCLGHG------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
             + LGH         ++ L           GIHV+ V+ GD H VAL + G++++WG  
Sbjct: 80  DFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSN 139

Query: 352 YCGALG--HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT-GSVYGFGWMGFGSL 408
             G LG    + + K     +  +     VQ+      +  L  T G ++ +G    G L
Sbjct: 140 VYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQL 199

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
           G    G  +  + P  ++ L    + Q++ G  H++V+T  G +FG+G N   Q+G +  
Sbjct: 200 GI---GTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQ 256

Query: 469 RGCLEPTEIFIQEMEEDTGLA 489
           R  L P+ + +   ++   LA
Sbjct: 257 RDILYPSLVKLLRTQKVIRLA 277


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 126/253 (49%), Gaps = 9/253 (3%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPL 266
           P   E L  +   QV  G      +T+ G V+ CG  T+G+LG G  +   P P+ I  L
Sbjct: 450 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITAL 509

Query: 267 EE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
              V   V + +G  +  A+T +G V+S+G G +  LGH  + +  +PR I+  + K I 
Sbjct: 510 SSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIR 569

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--A 383
              ++ G  H  AL SSG +YTWG G  G LGHGD   +  P+ +  L  H  +QV   +
Sbjct: 570 --DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGS 627

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
           R  +T  L D G V+ +G   FG LG   RG S+    P+ ++ L    V QI  G   +
Sbjct: 628 RDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGCNIPQNIERLNGQGVCQIECGAQFS 684

Query: 444 VVVTDRGRLFGFG 456
           + +T  G ++ +G
Sbjct: 685 LALTKSGVVWTWG 697



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 15/264 (5%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIA 276
           ++  AGL      TIR  V   G N   QLG   G  +  P+  ++++ L    +VVQ+A
Sbjct: 412 RKKAAGLESAA--TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSAL----NVVQVA 465

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEH 335
            G   + AVT  G VY+ G  +N  LG G     +  PR I       +  V V +G  H
Sbjct: 466 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 525

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             AL   G V++WG+G  G LGH   ++   P  + +LK+     +      +  L  +G
Sbjct: 526 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 585

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLF 453
            +Y +G   +G LG  D       L+P+++  L  H V Q++ G     T+ +TD G +F
Sbjct: 586 ELYTWGLGEYGRLGHGDNTTQ---LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 642

Query: 454 GFGDNERAQLGHDTLRGCLEPTEI 477
            +GD +  +LG     GC  P  I
Sbjct: 643 SWGDGDFGKLGRGGSEGCNIPQNI 666



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 11/246 (4%)

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
           SA +VVQV+        V   G+V+ CG+  N     G      PI  PR + AL     
Sbjct: 457 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 514

Query: 220 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
           K+V   +G      LT+ G V + G    G+LGH   ++   P+ I  L+    +  IA 
Sbjct: 515 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 573

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
           G S+  A+T +G +Y++G G    LGHG+   +L+P+ ++     G  V++V+ G  D  
Sbjct: 574 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 631

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +AL   G V++WG G  G LG G      +P+ +  L      Q+    + +  L  +G
Sbjct: 632 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 691

Query: 396 SVYGFG 401
            V+ +G
Sbjct: 692 VVWTWG 697



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 125/249 (50%), Gaps = 13/249 (5%)

Query: 110 SAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 168
           SA N +Q+  G      ++    V++CG +  G LG G  ++  V   R     +++VV+
Sbjct: 457 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGI-SSGTVPIPRQITALSSYVVK 515

Query: 169 ---VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
              V +   HA  +   G+VF+ G+      GH  +     +PRL+EALK    + +  G
Sbjct: 516 KVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACG 574

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP--SYM 282
            + +  LT  G ++T G   +G+LGHGD   +  PK +  L  +G  V+Q+A G   +  
Sbjct: 575 SSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQT 632

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           LA+T  G+V+S+G G    LG G       P+ I+  R  G  V ++  G +  +AL  S
Sbjct: 633 LALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE--RLNGQGVCQIECGAQFSLALTKS 690

Query: 343 GYVYTWGKG 351
           G V+TWGKG
Sbjct: 691 GVVWTWGKG 699


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 207 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 324
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 383
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+     QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
               +F L  TG+ +G+G    G L      V +++ +P  + +L+   V  IS G  HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247

Query: 444 VVVTDRGRLFGFGDNERAQL 463
            V+T+ G++F FG N   QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 137/305 (44%), Gaps = 23/305 (7%)

Query: 109 TSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINF 160
           TS    +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++      
Sbjct: 19  TSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN------ 72

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
               HV  VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   
Sbjct: 73  --DLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           QV+ G   +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG 
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGG 189

Query: 280 SYMLAVTGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           ++  A++  G  + +GS  +  L   G+  +    +P +I     K + V+ +S G EH 
Sbjct: 190 THSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHT 247

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
             L   G V+T+G    G L       +  P+ +  +   ++   CA       +  TG 
Sbjct: 248 AVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQ 307

Query: 397 VYGFG 401
           V   G
Sbjct: 308 VVSLG 312



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 5/154 (3%)

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
           +PR ++     GI +++ ++G+ H + L S+  VY+ G    G LG   +     PEP+ 
Sbjct: 11  KPRRLKA-GTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQ 69

Query: 372 SLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
           +L   H+ +  C  K  +  +   G V+ +G    G LG  +    +    P  + +L  
Sbjct: 70  ALNDLHVDLVSCG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAG 126

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             + Q+S G YH++ +++ G +F +G N   QLG
Sbjct: 127 IKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 160


>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 494

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 164/363 (45%), Gaps = 20/363 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H+L L S+ +V++ G++  G LG G  T   V    +     + VV V A  +H
Sbjct: 1   MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVP-VQVQGLSEVVAVDAGSSH 59

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  V   G V+  G N+S   G   T   I R   V+ L       V AG +    L   
Sbjct: 60  SLAVRSDGTVWAWGSNASGQLGDETT---ISRSTPVQVLGLSGVLFVAAGSSHVLALRYD 116

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   GSN+ GQ G G T +R  P     L     V+ +AAG ++ LAV  +G  +++G
Sbjct: 117 GTVWAWGSNSSGQRGDGTTNNRALPVQAQGLS---GVMAVAAGDNHSLAVRSDGSAWAWG 173

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           S ++  LG G   +  +P  +Q        VV V+AG  H +A+ S G V+ WG    G 
Sbjct: 174 SNASGQLGEGTTSNRPEPVQVQGLS----GVVAVAAGSAHSLAVRSDGTVWAWGANASGQ 229

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G   D+ +P  +  L     V V A    +  + + G+V+G+G      LG   +G 
Sbjct: 230 LGDGTTTDRLVPVQVQGLSG--VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLG---KG- 283

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           S ++L P  +  L A  V  ++ G  H++ V   G ++  G N   QLG  T    L P 
Sbjct: 284 SMRLLVPAQVQGLSA--VVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTTYRLVPV 341

Query: 476 EIF 478
            + 
Sbjct: 342 PVL 344



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 165/364 (45%), Gaps = 24/364 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L + S+ +V++ GS+  G LG   ETT   S T +     + V+ V+A  
Sbjct: 51  VAVDAGSSHSLAVRSDGTVWAWGSNASGQLGD--ETTISRS-TPVQVLGLSGVLFVAAGS 107

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +H   +   G V+  G NSS   G   TN     P   + L GV    V AG N +  + 
Sbjct: 108 SHVLALRYDGTVWAWGSNSSGQRGDGTTNNRAL-PVQAQGLSGVMA--VAAGDNHSLAVR 164

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G     GSN  GQLG G T +RP P  +  L     VV +AAG ++ LAV  +G V++
Sbjct: 165 SDGSAWAWGSNASGQLGEGTTSNRPEPVQVQGLS---GVVAVAAGSAHSLAVRSDGTVWA 221

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+ ++  LG G   D L P  +Q        VV V+AG  H +A+ + G V+ WG+   
Sbjct: 222 WGANASGQLGDGTTTDRLVPVQVQGLS----GVVAVAAGHHHSLAVRNDGTVWGWGRNDS 277

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
             LG G  +   +P  +  L +   V V A    +  +   G+V+  G    G LG    
Sbjct: 278 NQLGKG-SMRLLVPAQVQGLSA--VVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLG---- 330

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
              D     R++       V  ++   YH++ V   G ++ +G N   QLG  T    L 
Sbjct: 331 ---DGTTTYRLVPVPVLSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLV 387

Query: 474 PTEI 477
           P ++
Sbjct: 388 PVQV 391



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 159/357 (44%), Gaps = 34/357 (9%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-----PETTQCVSFTRINFPSAAHVVQ 168
           M +  G  H+L + S+ S ++ GS+  G LG G     PE  Q    +         VV 
Sbjct: 151 MAVAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTSNRPEPVQVQGLS--------GVVA 202

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           V+A   H+  V   G V+  G N+S   G   T   +  P  V+ L GV    V AG + 
Sbjct: 203 VAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLV-PVQVQGLSGVVA--VAAGHHH 259

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  +   G V   G N   QLG G ++    P  +  L    +VV +AAG ++ LAV  +
Sbjct: 260 SLAVRNDGTVWGWGRNDSNQLGKG-SMRLLVPAQVQGLS---AVVAVAAGDTHSLAVGSD 315

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V++ GS +N  LG G     L P  + +       VV V+A D H +A+ S G V+ W
Sbjct: 316 GTVWAVGSNNNGQLGDGTTTYRLVPVPVLS------GVVSVAANDYHSLAVRSDGTVWAW 369

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G    G LG G    + +P  +S L     V V A    +  +   GS + +G   +G L
Sbjct: 370 GYNSTGQLGDGTTTTRLVPVQVSGLSE--VVSVVAGGYHSLAVRSDGSAWDWGSNAYGQL 427

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G    G +  +  P  +  L    V  +++G  H++ +   G ++ +G N   QLG+
Sbjct: 428 G---DGSTTYLPVPVRVQQLSG--VGAVASGSSHSLALRSDGTVWTWGYNSFGQLGN 479



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 114/258 (44%), Gaps = 33/258 (12%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG------PETTQCVSFTRINFPSAAHVV 167
           + +  G +H+L + N  +V+  G +    LG G      P   Q +S           VV
Sbjct: 251 VAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMRLLVPAQVQGLSA----------VV 300

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            V+A + H+  V   G V+  G N++   G   T    +R   V  L GV    V+   N
Sbjct: 301 AVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTT---YRLVPVPVLSGV----VSVAAN 353

Query: 228 FTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
               L +R  G V   G N+ GQLG G T  R  P  ++ L EV SVV   AG  + LAV
Sbjct: 354 DYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVPVQVSGLSEVVSVV---AGGYHSLAV 410

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             +G  + +GS +   LG G       P  +Q     G     V++G  H +AL S G V
Sbjct: 411 RSDGSAWDWGSNAYGQLGDGSTTYLPVPVRVQQLSGVGA----VASGSSHSLALRSDGTV 466

Query: 346 YTWGKGYCGALGHGDEID 363
           +TWG    G LG+G  ++
Sbjct: 467 WTWGYNSFGQLGNGPPLN 484



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 9/147 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +    YH+L + S+ +V++ G +  G LG G  TT+ V    +     + VV V A  
Sbjct: 348 VSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVP---VQVSGLSEVVSVVAGG 404

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  V   G  +  G N+    G   T   P+  P  V+ L GV    V +G + +  L
Sbjct: 405 YHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPV--PVRVQQLSGVGA--VASGSSHSLAL 460

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPT 259
              G V T G N+ GQLG+G  L+  T
Sbjct: 461 RSDGTVWTWGYNSFGQLGNGPPLNTAT 487


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 22/345 (6%)

Query: 145 HGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR 203
           HGP  TT  +    +       V  V+    HAA + +  +VFT G+  S   GH     
Sbjct: 242 HGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGH-GAGT 300

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPK 261
            IF+PRL+E+L     + +  G   T  +T  G ++T G  TH  G LGHG T+    PK
Sbjct: 301 SIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPK 360

Query: 262 SIA-PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            ++ PLE +  V  ++ G  +   +T +G +Y+FG G+   LGHG +     P+ +++  
Sbjct: 361 RVSGPLEGL-QVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESL- 418

Query: 321 RKGIHVVRVSAGDEHVVAL---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
            KG+  + VS G  H  A+          SSG ++TWG G    LGHGD   K  P  + 
Sbjct: 419 -KGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVP 477

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRA 430
           SL  +   +       T  L  +G ++  G   +G LG P+    +    PR++ D +  
Sbjct: 478 SLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPN----NDGRYPRLVEDKVGG 533

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             V +++ G YH  V+T+ G ++ +G     +LGH  +     PT
Sbjct: 534 GGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPT 578



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 153/339 (45%), Gaps = 20/339 (5%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           ++  L+   + VF+ G    G LGHG  T+       +   S  +V  ++  E H   V 
Sbjct: 272 KHAALITRQAEVFTWGEECSGRLGHGAGTS-IFQPRLLESLSICNVEIIACGEFHTCAVT 330

Query: 181 QSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
            +G ++T GD  +++   GH  T       R+   L+G+    V+ G   T  +T  G +
Sbjct: 331 ATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTVSCGTWHTALITSSGQL 390

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------TGNG 289
           +T G  T G LGHG+      PK +  L+ +   + ++ G  +  AV           +G
Sbjct: 391 YTFGDGTFGALGHGNRETISYPKEVESLKGL-RTISVSCGVWHSAAVVEVIMTQSNASSG 449

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            ++++G G  + LGHG++  +L+P  + +      H  + + G    + L +SG+++T G
Sbjct: 450 KLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDYNFH--KSACGHTLTIGLTTSGHMFTVG 507

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVYGFGWMGFGSL 408
               G LG+ +  D   P  +        V   A       VL +TG VY +G    G L
Sbjct: 508 SSVYGQLGNPNN-DGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRL 566

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           G  D  ++D+ + P ++++LR   V +I+ G   T  ++
Sbjct: 567 GHGD--IADRKV-PTLVEALRDRSVKRIACGSSFTAAIS 602



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 22/273 (8%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           I  G +HT  ++ +     +  G+   G+LGHG   +  +   R++ P     V  VS  
Sbjct: 319 IACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIP-KRVSGPLEGLQVSTVSCG 377

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
             H A +  SGQ++T GD +    GH  R+T   I  P+ VE+LKG+    V+ G+  + 
Sbjct: 378 TWHTALITSSGQLYTFGDGTFGALGHGNRET---ISYPKEVESLKGLRTISVSCGVWHSA 434

Query: 231 FL---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            +            G + T G     +LGHGD   +  P  +  L +  +  + A G + 
Sbjct: 435 AVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDY-NFHKSACGHTL 493

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +T +G +++ GS     LG+   +D   PR ++  +  G  VV V+ G  HV  L +
Sbjct: 494 TIGLTTSGHMFTVGSSVYGQLGN-PNNDGRYPRLVED-KVGGGGVVEVACGSYHVAVLTN 551

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           +G VYTWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 552 TGEVYTWGKGANGRLGHGDIADRKVPTLVEALR 584



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 17/250 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           ++ G +HT LI++S  +++ G    G LGHG   T  +S+ + +        + VS    
Sbjct: 374 VSCGTWHTALITSSGQLYTFGDGTFGALGHGNRET--ISYPKEVESLKGLRTISVSCGVW 431

Query: 175 HAAFVLQ---------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           H+A V++         SG++FT GD   +  GH D +  + +P  V +L      +   G
Sbjct: 432 HSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKL-KPTCVPSLIDYNFHKSACG 490

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              T  LT  GH+ T GS+ +GQLG+ +   R  P+ +      G VV++A G  ++  +
Sbjct: 491 HTLTIGLTTSGHMFTVGSSVYGQLGNPNNDGR-YPRLVEDKVGGGGVVEVACGSYHVAVL 549

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T  G VY++G G+N  LGHG+  D   P  ++  R + +   R++ G     A+    +V
Sbjct: 550 TNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVK--RIACGSSFTAAISQHKWV 607

Query: 346 YTWGKGYCGA 355
               +  C A
Sbjct: 608 SGVEQSQCSA 617



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 6/177 (3%)

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           G G   D L P+ +++     + V  V+ G +H   +     V+TWG+   G LGHG   
Sbjct: 243 GPGATTDILVPKPLES--NVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGHGAGT 300

Query: 363 DKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
               P  L SL   ++ +  C  +  T  +  TG +Y +G  G  + G    G +     
Sbjct: 301 SIFQPRLLESLSICNVEIIACG-EFHTCAVTATGDLYTWG-DGTHNAGLLGHGSTVSHWI 358

Query: 422 P-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           P R+   L    VS +S G +HT ++T  G+L+ FGD     LGH        P E+
Sbjct: 359 PKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEV 415



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 15/129 (11%)

Query: 340 DSSGYVYTWGKGYCGAL----------GHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKT 388
           +S G VY WG+  C             G G   D  +P+PL S++   ++   C  K   
Sbjct: 216 ESFGDVYVWGEVMCDTTSRSGSDGNVHGPGATTDILVPKPLESNVMLDVSYVACGVKHAA 275

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
            +      V+ +G    G LG    G    + +PR+L+SL   +V  I+ G +HT  VT 
Sbjct: 276 LI-TRQAEVFTWGEECSGRLG---HGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTA 331

Query: 449 RGRLFGFGD 457
            G L+ +GD
Sbjct: 332 TGDLYTWGD 340


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 152/344 (44%), Gaps = 25/344 (7%)

Query: 150 TQCVSFTRINFPSAAH-----VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 204
           TQ  S T +  P A       V  ++   +H A   + G VFT G  S    GH   ++ 
Sbjct: 178 TQIPSKTDVLIPKALESNVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGH-GIDKD 236

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKS 262
              P LVE L+G   + V  G   T  L+    ++T G  TH  G LGHG       PK 
Sbjct: 237 FSSPVLVEFLEGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKM 296

Query: 263 I-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
           +  PLE +  VV IA G  +    T NG +++FG G+   LGHG+Q     P+ +Q    
Sbjct: 297 VNGPLEGL-QVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEVQLL-- 353

Query: 322 KGIHVVRVSAGDEHVVAL----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
            G+  ++V+ G  H  A+           SS  ++TWG G    LGHG++     P  ++
Sbjct: 354 TGLKTIKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVA 413

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
            L  +   QV      T  L  +G V+  G    G LG P   +S   +   + D L   
Sbjct: 414 PLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNP---MSLGKIPTLVQDKLLGE 470

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
            V +IS G +H  ++T++  ++ +G     +LGH  +     PT
Sbjct: 471 FVEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPT 514



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 133/284 (46%), Gaps = 20/284 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNS---SVFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE   GN  + +  G YHT  +S S     +  G+   G+LGHG E +  +    +N P
Sbjct: 242 LVEFLEGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIP-KMVNGP 300

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                VV ++    H+A    +G++FT GD +    GH D    ++ P+ V+ L G+   
Sbjct: 301 LEGLQVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGD-QESVWYPKEVQLLTGLKTI 359

Query: 221 QVTAGLNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           +V  G+  T  +          +    + T G     +LGHG+      P  +APL E  
Sbjct: 360 KVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEY- 418

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           +  Q+  G +  +A+T +G V++ G   +  LG+     ++ P  +Q  +  G  V ++S
Sbjct: 419 NFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKI-PTLVQD-KLLGEFVEKIS 476

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            G  HV  L +   +YTWG G  G LGHGD  D+  P  + +LK
Sbjct: 477 CGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALK 520



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 26/234 (11%)

Query: 260 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           PK++     V  V  IA G  ++   T  G V+++G  S   LGHG   D   P  ++  
Sbjct: 189 PKALE--SNVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPVLVEFL 246

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPE----PLSSL 373
             +G +   V+ G+ H  AL  S  +YTWG G    G LGHG E    +P+    PL  L
Sbjct: 247 --EGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKMVNGPLEGL 304

Query: 374 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
           +    V +      + +    G ++ FG   FG LG  D+   + V  P+ +  L     
Sbjct: 305 Q---VVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQ---ESVWYPKEVQLLTGLKT 358

Query: 434 SQISTGLYHTVVVTDRG----------RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +++ G++HT  + +            +LF +GD +  +LGH      L+PT +
Sbjct: 359 IKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRV 412



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 18/226 (7%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + I  G +H+ L  SN  +F+ G    GVLGHG +  + V + + +   +    ++V+  
Sbjct: 307 VSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQ--ESVWYPKEVQLLTGLKTIKVACG 364

Query: 173 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             H A +++          S ++FT GD      GH +      +P  V  L      QV
Sbjct: 365 VWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHGN-KETYLQPTRVAPLMEYNFHQV 423

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSY 281
             G N T  LT  GHV T G   HGQLG+  +L + PT      L E   V +I+ G  +
Sbjct: 424 ECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKIPTLVQDKLLGEF--VEKISCGAHH 481

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           +  +T    +Y++G G+N  LGHG+  D   P  +   + + I  V
Sbjct: 482 VAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKDRNIKNV 527



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 5/170 (2%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L P+A+++     + V  ++ G  H+      G+V+TWG+   G LGHG + D + P 
Sbjct: 185 DVLIPKALES---NVLDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPV 241

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-S 427
            +  L+ +    V   +  T  L  +  +Y +G  G  ++G    G       P++++  
Sbjct: 242 LVEFLEGNNFEFVACGEYHTSALSKSFELYTWG-DGTHNVGLLGHGSEASHWIPKMVNGP 300

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           L    V  I+ G +H+ + T  G+LF FGD     LGH        P E+
Sbjct: 301 LEGLQVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEV 350



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 15/183 (8%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLI--------SNSS---VFSCGSSLCGVLGHG 146
           +SV +  ++   +    +++  G +HT  I        SNSS   +F+ G      LGHG
Sbjct: 342 ESVWYPKEVQLLTGLKTIKVACGVWHTAAIIEVAFQSGSNSSSWKLFTWGDGDMHRLGHG 401

Query: 147 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 206
            + T  +  TR+      +  QV    N    +  SG VFT G       G+  +   I 
Sbjct: 402 NKETY-LQPTRVAPLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKI- 459

Query: 207 RPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P LV+  L G   ++++ G +    LT +  ++T G   +G+LGHGD  DR +P  +  
Sbjct: 460 -PTLVQDKLLGEFVEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVA 518

Query: 266 LEE 268
           L++
Sbjct: 519 LKD 521


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 142/312 (45%), Gaps = 18/312 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H A V + G+VFT  + +    GH      + RP+LVE L       V  G
Sbjct: 272 VHQIACGVRHIALVTRQGEVFTWEEEAGGRLGH-GIQVDVCRPKLVEFLALTNIDFVACG 330

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +  
Sbjct: 331 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSA 390

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 339
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+    
Sbjct: 391 LATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTLKVACGVWHTVAIVEVM 448

Query: 340 ------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  
Sbjct: 449 NQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTT 508

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +G V+  G    G LG  +   SD  L   + D L    V +IS G +H  V+T R  +F
Sbjct: 509 SGHVFTMGGTSHGQLGSSN---SDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVF 565

Query: 454 GFGDNERAQLGH 465
            +G     +LGH
Sbjct: 566 TWGKGSNGRLGH 577



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 327 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 385

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 225
             H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 386 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTLKVACGVWHTVAI 444

Query: 226 ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
              +N TG  T    + T G     +LGHG+      P  ++ L +  +  QIA G ++ 
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFNQIACGHTFT 503

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 504 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 561

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V+TWGKG  G LGHGD+ D+  P  + +L+
Sbjct: 562 SEVFTWGKGSNGRLGHGDKDDRKTPTLVEALR 593



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 23/236 (9%)

Query: 255 LDRPTPKSIAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 312
           +D   PK   PLE   V  V QIA G  ++  VT  G V+++   +   LGHG Q D  +
Sbjct: 256 IDVLIPK---PLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCR 312

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPL 370
           P+ ++      I  V  + G+ H  A+ +SG ++TWG G    G LGHG ++   +P+ +
Sbjct: 313 PKLVEFLALTNIDFV--ACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRV 370

Query: 371 SSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           S     L V  V      + +    G ++ FG   FG LG  DR   + V  P+ +  L 
Sbjct: 371 SGPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR---ESVSYPKEVKMLS 427

Query: 430 AHHVSQISTGLYHTVVV----------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
                +++ G++HTV +          T   +LF +GD ++ +LGH      L PT
Sbjct: 428 GLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPT 483



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 142/345 (41%), Gaps = 36/345 (10%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
           QI  G  H  L++    VF+      G LGHG       P+  + ++ T I+F       
Sbjct: 274 QIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDF------- 326

Query: 168 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
            V+  E H   V  SG +FT GD  ++    GH          R+   ++G+    V  G
Sbjct: 327 -VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACG 385

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              +   T  G + T G    G LGHGD      PK +  L  +   +++A G  + +A+
Sbjct: 386 TWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGL-KTLKVACGVWHTVAI 444

Query: 286 ----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
                     T +  ++++G G    LGHG +   L P  + +      +  +++ G   
Sbjct: 445 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFN--QIACGHTF 502

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDT 394
            VAL +SG+V+T G    G LG  +  D  LP  +   L      ++        VL   
Sbjct: 503 TVALTTSGHVFTMGGTSHGQLGSSNS-DGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSR 561

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
             V+ +G    G LG  D+   D    P ++++LR  HV  IS G
Sbjct: 562 SEVFTWGKGSNGRLGHGDK---DDRKTPTLVEALRERHVKSISCG 603



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 24/250 (9%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   S    ++V+  
Sbjct: 380 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR--ESVSYPKEVKMLSGLKTLKVACG 437

Query: 173 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             H   +++          S ++FT GD      GH +    +  P  V +L      Q+
Sbjct: 438 VWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFNQI 496

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 281
             G  FT  LT  GHV T G  +HGQLG  ++ D   P  +     VG  V+ I+ G  +
Sbjct: 497 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLP-CLVQDRLVGEFVEEISCGDHH 554

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           +  +T    V+++G GSN  LGHG++ D   P  ++  R +  HV  +S G        S
Sbjct: 555 VAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRER--HVKSISCGSN----FTS 608

Query: 342 SGYVYTWGKG 351
           S  ++ W  G
Sbjct: 609 SICIHKWVSG 618



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 26/205 (12%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLI-----------SNSSVFSCGSSLCGVLGHG 146
           +SV +  ++   S    +++  G +HT+ I           S+  +F+ G      LGHG
Sbjct: 415 ESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHG 474

Query: 147 PETT----QCVS-FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 201
            + T     CVS     NF       Q++        +  SG VFT G  S    G  ++
Sbjct: 475 NKETYLLPTCVSSLIDYNFN------QIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS 528

Query: 202 NRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           +  +  P LV+  L G   ++++ G +    LT R  V T G  ++G+LGHGD  DR TP
Sbjct: 529 DGKL--PCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTP 586

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L E   V  I+ G ++  ++
Sbjct: 587 TLVEALRER-HVKSISCGSNFTSSI 610


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 24/326 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G VF  G+      GH   +  +  P+LV+AL GV  + V  G
Sbjct: 291 VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGH-GIDVDVSEPQLVQALAGVNAELVACG 349

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G++    G +GH + +    PK ++ PLE V  +  IA G  + 
Sbjct: 350 DFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV-RISSIACGAWHT 408

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 340
             V+  G +++FG G+   LGHG++ +   P+ +++   KG+  VR + G  H  A+   
Sbjct: 409 ALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESL--KGLKTVRAACGIWHTAAVVEV 466

Query: 341 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G    LGHGD+  K +P  +++L  +   QV      T  
Sbjct: 467 IVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVA 526

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDR 449
           L  +G V+  G   +G LG P      KV  P ++D  L    V +I  G +H   ++ +
Sbjct: 527 LTTSGRVFTMGSTIYGQLGNPK--ADGKV--PGMVDGELARTFVEEIGCGAHHVAALSSK 582

Query: 450 GRLFGFGDNERAQLGHDTLRGCLEPT 475
             ++ +G     +LGH  +     PT
Sbjct: 583 TEIYTWGKGANGRLGHGDVEDRTAPT 608



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 22/286 (7%)

Query: 106 IVETSAG-NQMQITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRINFP 161
           +V+  AG N   +  G +HT  ++ S  +++ G+     G++GH    +  +   R++ P
Sbjct: 334 LVQALAGVNAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMP-KRMSSP 392

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                +  ++    H A V  +GQ+FT GD +    GH D  R +  P+ VE+LKG+   
Sbjct: 393 LEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGD-KRNLAIPKEVESLKGLKTV 451

Query: 221 QVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
           +   G+  T  +               G + T G     +LGHGD   +  P  +A L +
Sbjct: 452 RAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVD 511

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
             +  Q+A G S  +A+T +G V++ GS     LG+ +   ++         R    V  
Sbjct: 512 Y-NFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELAR--TFVEE 568

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           +  G  HV AL S   +YTWGKG  G LGHGD  D+T P  + +L+
Sbjct: 569 IGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALR 614



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 16/236 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G +HT L+S++  +F+ G    GVLGHG +    +    +        V+ +    H
Sbjct: 401 IACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIP-KEVESLKGLKTVRAACGIWH 459

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD   +  GH D  + +  P  V AL     +QV 
Sbjct: 460 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLV-PTCVAALVDYNFRQVA 518

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V T GS  +GQLG+    D   P  +        V +I  G  ++ 
Sbjct: 519 CGHSLTVALTTSGRVFTMGSTIYGQLGNPKA-DGKVPGMVDGELARTFVEEIGCGAHHVA 577

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           A++    +Y++G G+N  LGHG+  D   P  ++  R K +  V   +    V+ L
Sbjct: 578 ALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICL 633



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 25/295 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ ++A   +    +  G      +T +G V   G    G+LGHG  +D   P+ +  L 
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 339

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            V + + +A G  +  AVT +G +Y++G+   S   +GH        P+ + +   +G+ 
Sbjct: 340 GVNAEL-VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLEGVR 397

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           +  ++ G  H   + S+G ++T+G G  G LGHGD+ +  +P+ + SLK    V+     
Sbjct: 398 ISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGI 457

Query: 386 RKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+            +G ++ +G      LG  D+   ++ L P  + +L  ++ 
Sbjct: 458 WHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDK---EQKLVPTCVAALVDYNF 514

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 482
            Q++ G   TV +T  GR+F  G     QLG+    G +      E    F++E+
Sbjct: 515 RQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEI 569



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 8/178 (4%)

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           G G + D L P+A+Q      + V  ++ G  H   +   G V+ WG+ Y G LGHG ++
Sbjct: 270 GAGSRVDSLVPKALQAAVV--LDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDV 327

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--- 419
           D + P+ + +L    A  V      T  +  +G +Y +G     S G    G S+ V   
Sbjct: 328 DVSEPQLVQALAGVNAELVACGDFHTCAVTLSGELYTWG-ADAQSGGLV--GHSNPVSHW 384

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +  R+   L    +S I+ G +HT +V+  G+LF FGD     LGH   R    P E+
Sbjct: 385 MPKRMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEV 442


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 145/305 (47%), Gaps = 22/305 (7%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            HAA V + G+VF  G       G +  +  I  P++V++L G+  K V  G   T  LT
Sbjct: 314 KHAALVTKQGEVFCWGQGKWGRLGQK-IDMDISSPKIVDSLNGLHVKTVACGEYHTCALT 372

Query: 234 IRGHVHTCGSNT--HGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGV 290
             G V+T G++      L  G T  +  P+ +  PL+ + S+  +A G  +   V+  G 
Sbjct: 373 DSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGI-SISSVACGEWHTAIVSSCGR 431

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------- 339
           ++++G G+   LGHG+      P+ +++    G+ V   + G  H  A+           
Sbjct: 432 LFTYGDGTFGVLGHGDLRSYSSPKEVESL--NGLRVRSAACGSWHTAAIVEVMFDRFRYN 489

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
            +SG ++TWG G  G LGH D  +K +P  ++ L  +  VQV   +  T  L + G V+ 
Sbjct: 490 SASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFA 549

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
            G   +G LG P     DKV+   +   L+   V  ISTG YH  V+T  G ++ +G  E
Sbjct: 550 MGSAKYGQLGNPH--ARDKVV--IVEGQLKQEFVKVISTGSYHVAVLTSAGSVYTWGRGE 605

Query: 460 RAQLG 464
             QLG
Sbjct: 606 IGQLG 610



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 156/347 (44%), Gaps = 24/347 (6%)

Query: 44  GSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHS 103
           G + L P+   S   L    + AL   +A +    Q E+     G W R+ + +     S
Sbjct: 289 GIYSLVPKLLESTAMLDVHNI-ALGGKHAALVTK-QGEVFCWGQGKWGRLGQKIDMDISS 346

Query: 104 SDIVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRIN 159
             IV++  G  ++ +  G YHT  +++S  V++ G+ +C   +L  G   +Q +   R+ 
Sbjct: 347 PKIVDSLNGLHVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIP-QRLG 405

Query: 160 FP-SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
            P     +  V+  E H A V   G++FT GD +    GH D  R    P+ VE+L G+ 
Sbjct: 406 GPLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDL-RSYSSPKEVESLNGLR 464

Query: 219 CKQVTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
            +    G   T            + +  G + T G    G+LGH D  ++  P  +  L 
Sbjct: 465 VRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLV 524

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           +    VQ++ G    +A+T  G V++ GS     LG+    D++    I   + K   V 
Sbjct: 525 DY-DFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKV---VIVEGQLKQEFVK 580

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            +S G  HV  L S+G VYTWG+G  G LG GD  D+  P  + +L+
Sbjct: 581 VISTGSYHVAVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALR 627



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 123/277 (44%), Gaps = 22/277 (7%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+L+E+   +    +  G      +T +G V   G    G+LG    +D  +PK +  L 
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLN 354

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC----LGHGEQHDELQPRAIQTFRRKG 323
            +  V  +A G  +  A+T +G VY++G+  + C    L  G    +  P+ +      G
Sbjct: 355 GL-HVKTVACGEYHTCALTDSGEVYTWGN--DVCCADLLNEGRTRSQWIPQRLGG-PLDG 410

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           I +  V+ G+ H   + S G ++T+G G  G LGHGD    + P+ + SL          
Sbjct: 411 ISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAAC 470

Query: 384 RKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
               T  +V+           +G ++ +G    G LG  D G  +K++  R+   L  + 
Sbjct: 471 GSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNG--NKIVPTRVTQ-LVDYD 527

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
             Q+S G   TV +T+ G++F  G  +  QLG+   R
Sbjct: 528 FVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHAR 564



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 21/221 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  IA G  +   VT  G V+ +G G    LG     D   P+ + +    G+HV  V+ 
Sbjct: 306 VHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSL--NGLHVKTVAC 363

Query: 332 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKT 388
           G+ H  AL  SG VYTWG   C A  L  G    + +P+ L      +++  V   +  T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSVACGEWHT 423

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            ++   G ++ +G   FG LG  D R  S     P+ ++SL    V   + G +HT  + 
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHGDLRSYSS----PKEVESLNGLRVRSAACGSWHTAAIV 479

Query: 448 ----DR-------GRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               DR       G+LF +GD +  +LGH      + PT +
Sbjct: 480 EVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRV 520



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 2/167 (1%)

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
           L P+ +++     +H   ++ G +H   +   G V+ WG+G  G LG   ++D + P+ +
Sbjct: 293 LVPKLLESTAMLDVH--NIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIV 350

Query: 371 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
            SL       V   +  T  L D+G VY +G     +    +     + +  R+   L  
Sbjct: 351 DSLNGLHVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDG 410

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +S ++ G +HT +V+  GRLF +GD     LGH  LR    P E+
Sbjct: 411 ISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEV 457



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 100/225 (44%), Gaps = 20/225 (8%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 163
           +  G +HT ++S+   +F+ G    GVLGHG       P+  + ++  R+   +      
Sbjct: 416 VACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHT 475

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V    +   +   SG++FT GD      GH D    I  P  V  L      QV+
Sbjct: 476 AAIVEVMF--DRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIV-PTRVTQLVDYDFVQVS 532

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G   T  LT  G V   GS  +GQLG+    D+     I   +     V++ +  SY +
Sbjct: 533 CGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKVV---IVEGQLKQEFVKVISTGSYHV 589

Query: 284 AV-TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           AV T  G VY++G G    LG G+  D   P  ++  R + ++ +
Sbjct: 590 AVLTSAGSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTI 634



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 70/168 (41%), Gaps = 13/168 (7%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           RY++   ++  +F+ G    G LGH     + V  TR+        VQVS        + 
Sbjct: 487 RYNS---ASGKLFTWGDGDEGRLGHVDNGNKIVP-TRVTQLVDYDFVQVSCGRMLTVALT 542

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVPCKQVTAGLNFTGFLTIRGH 237
             G+VF  G        +     P  R ++V     LK    K ++ G      LT  G 
Sbjct: 543 NMGKVFAMGSAK-----YGQLGNPHARDKVVIVEGQLKQEFVKVISTGSYHVAVLTSAGS 597

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
           V+T G    GQLG GDT DR TP  +  L +   V  I  GPS+  A+
Sbjct: 598 VYTWGRGEIGQLGLGDTEDRYTPCFVEALRD-RQVNTITCGPSFTAAI 644


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 161/337 (47%), Gaps = 24/337 (7%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 3627

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 3628 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 3686

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-V 290
            +T  G + T G+  +G+LG G+T ++  P+            ++A G ++ LAV+ +G +
Sbjct: 3687 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPE------------RVACGLNHTLAVSADGSM 3734

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            V++FG G    LG G    +  P+ +      GI + +V+ G +  VAL   G+VYT+G+
Sbjct: 3735 VWAFGDGDYGKLGLGNSTAKSSPQKVDVL--CGIGIKKVACGTQFSVALTKDGHVYTFGQ 3792

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
                 L  G   +   P+ +  L   +   V      T  L  TG VY +G    G LG 
Sbjct: 3793 DRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGL 3852

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
               G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 3853 ---GHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 3886



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 398 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 455

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 456 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 513

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 514 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 569

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 570 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 629

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 630 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLALSHDN 682

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 683 EVYAWGNNSMGQCGQ 697



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 527 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 582

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 583 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 640

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H +AL     VY WG    G  G 
Sbjct: 641 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 697

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 698 GNSTGPITKPKKVSGLDGIAIQQISA 723



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 146/324 (45%), Gaps = 24/324 (7%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 3562 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 3619

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    VVQ++
Sbjct: 3620 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 3678

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P              RV+ G  H 
Sbjct: 3679 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPE-------------RVACGLNHT 3725

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 3726 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDG 3785

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 3786 HVYTFGQDRL--IGLPE-GRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAW 3842

Query: 456  GDNERAQLGHDTLRGCLEPTEIFI 479
            G N   QLG        EPT + +
Sbjct: 3843 GSNSEGQLGLGHTNHVREPTLVTV 3866



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G+  HGQL   G  +  P   + AP        Q+  G +    +  NG V + G 
Sbjct: 3537 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 3591

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 3592 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 3651

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LGHG+   +  P  + +L+    VQ+    + + V+   G ++ FG   +G LG  +   
Sbjct: 3652 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 3709

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
            S+K L  R            ++ GL HT+ V+  G + + FGD +  +LG
Sbjct: 3710 SNKKLPER------------VACGLNHTLAVSADGSMVWAFGDGDYGKLG 3747



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 372 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 427

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 428 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 486

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 487 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 543



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3537 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 3593

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3594 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3650

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 3651 KLGHGNSDRQRRPRQIEALQGEE 3673



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 627 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEV 684

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 685 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 724


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 164/356 (46%), Gaps = 29/356 (8%)

Query: 132 VFSCGSSLCGVLGHGPETT----QCVSFTRINF--PSAAHVVQVSA---SENHAAFVLQS 182
           VF C S   G L   P +     Q + F  + +  P+  H V V A    E H  F+   
Sbjct: 8   VFGCASD--GQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAND 65

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 243 SNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILISDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           + H        P  ++ F    + ++++SAG+   +AL +SG ++ WG+   G LG+   
Sbjct: 183 IRHS-------PAEVELF--VSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTN 233

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
            D   P  + ++ S + V+ C     +  L   G V+  G   FG LG      S   +R
Sbjct: 234 RDVINPREVPNINSVVVVE-CGDSH-SIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMR 291

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
              +  +   HV++I+ G  HT+VV + G++  FG N   QLGH   R  + P  I
Sbjct: 292 G--ITEMLGSHVTRIACGRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRMI 344



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 133/312 (42%), Gaps = 59/312 (18%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           + +G  HTL ++N   V+SCGS+  G LG G       +   ++  +A  ++Q+SA  +H
Sbjct: 52  VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSH 111

Query: 176 AAFVLQSGQVFTCGDNSS------------------------------------------ 193
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 194 -FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 252
            F  G +   R    P  VE    VP  Q++AG  FT  LT  G +   G N  GQLG+ 
Sbjct: 172 VFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 253 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 312
              D   P+ +     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNRDVINPREVP---NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 313 PRAIQTFRR-----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 368 EPLSSLKSHLAV 379
             + S+++  +V
Sbjct: 342 RMIDSVENVASV 353



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 9/161 (5%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI+ G   T+ L ++ ++F+ G +  G LG+   T + V   R   P+   VV V   +
Sbjct: 199 IQISAGNLFTMALTASGTLFAWGRNEEGQLGNF--TNRDVINPR-EVPNINSVVVVECGD 255

Query: 174 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           +H+  +   G+VF+CG +S     CG    ++   R   +  + G    ++  G   T  
Sbjct: 256 SHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRG--ITEMLGSHVTRIACGRCHT-I 312

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 313 VVANGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 10/251 (3%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           PR +  L+G+  +Q+  G + T  LT  G V +CGSN H QLG   +  +P P +     
Sbjct: 42  PRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPVTAL--- 98

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHV 326
           +   +VQ+  G  + +A+T  G VY +GS S   LG+GE Q   L PR ++T       V
Sbjct: 99  QCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTL--APFTV 156

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARK 385
           V+++ G  H +AL ++G +Y WG    G LG G   + + +P  +++L      Q+    
Sbjct: 157 VQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGA 216

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             + VL  +G ++ +G   FG LG  D    D+   P +L +LR  HV  I+ G  H+  
Sbjct: 217 NHSMVLSKSGVIFVWGSNRFGQLGLSDN--KDRAF-PTLLKTLRQQHVKFIAAGGAHSAA 273

Query: 446 VTDRGRLFGFG 456
           +T  G +F FG
Sbjct: 274 LTAHGGVFTFG 284



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 24/352 (6%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI TG +HTL L S+  V SCGS+    LG    TT+    T +       +VQV   + 
Sbjct: 55  QIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTKPEPVTALQ---CLRIVQVCCGQQ 111

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  + ++GQV+  G NS    G+ +       PR V+ L      Q+  G N    L  
Sbjct: 112 HSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLN 171

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 293
            G ++  G N +GQLG G T+  P    +     +G  + QIA G ++ + ++ +GV++ 
Sbjct: 172 NGALYAWGDNGNGQLGIG-TVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFV 230

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +GS     LG  +  D   P  ++T R++  HV  ++AG  H  AL + G V+T+G  + 
Sbjct: 231 WGSNRFGQLGLSDNKDRAFPTLLKTLRQQ--HVKFIAAGGAHSAALTAHGGVFTFGWSFY 288

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
                  E+  +L    S+ +S LA       RK F L++      F    +GS G    
Sbjct: 289 ----ESHEVRISLRGTESNPQSALA-------RKLFSLIER----EFCRHSYGSYGQLGH 333

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR-GRLFGFGDNERAQLG 464
           G  +  L P  +  L    ++QI+ G  HTV      G++F FG     QLG
Sbjct: 334 GSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 46/299 (15%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q+  G+ H++ ++ +  V+  GS+  G LG+G      +S   +   +   VVQ++   
Sbjct: 104 VQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGS 163

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           NH   +L +G ++  GDN +   G      P   P  V  L G+P  Q+  G N +  L+
Sbjct: 164 NHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLS 223

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G +   GSN  GQLG  D  DR  P  +  L +   V  IAAG ++  A+T +G V++
Sbjct: 224 KSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQ-QHVKFIAAGGAHSAALTAHGGVFT 282

Query: 294 F---------------GSGSN----------------FC---------LGHGEQHDELQP 313
           F               G+ SN                FC         LGHG ++D+L P
Sbjct: 283 FGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTP 342

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
             IQ     G  + +++ G  H V    + G V+T+G G  G LG    +  T P PL+
Sbjct: 343 MKIQEL--MGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLGSSVSMVST-PTPLA 398



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 14/176 (7%)

Query: 294 FGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           FG+ ++  LG G  E H    PR+I     +GI V +++ G  H + L S G V +    
Sbjct: 21  FGNTNSGELGLGGIEDHIVRVPRSIPQL--EGIRVRQIATGAHHTLVLTSHGRVLS---- 74

Query: 352 YCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            CG+  H   G E+  T PEP+++L+    VQVC  ++ +  L + G VY +G    G L
Sbjct: 75  -CGSNDHDQLGQEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQL 133

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           G  +    +  L PR + +L    V QI+ G  H + + + G L+ +GDN   QLG
Sbjct: 134 G--NGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLG 187



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 399 GFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           GFG    G LG    G+ D ++R PR +  L    V QI+TG +HT+V+T  GR+   G 
Sbjct: 20  GFGNTNSGELGL--GGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGS 77

Query: 458 NERAQLGHDTLRGCLEPT 475
           N+  QLG +      EP 
Sbjct: 78  NDHDQLGQEVSTTKPEPV 95


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 142/297 (47%), Gaps = 20/297 (6%)

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNFT 229
           AF  QS  V+T G+ +    GH    +   R       P+L+EA +G     V  G + +
Sbjct: 37  AFSTQS-SVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHS 95

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
             +   G ++  GSN + +LG G++ +  T P+ +  L+ V  +V ++ G  +  AV  +
Sbjct: 96  AAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGV-KIVDVSCGDYFTAAVDAD 154

Query: 289 GVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           G +YS+G G +       LGH    DE  PR + T   +G+ ++ V  G+ H VAL   G
Sbjct: 155 GKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDG 214

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            ++ WG G  G LG+G+     +PEP+        V + A +  +F L D G +Y +G  
Sbjct: 215 EIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDNGELYSWGGN 274

Query: 404 GFGSLGFPDRGVSDKVLR----PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
               LG    G++  V      P ++++     V QI+ G  H   VTD GRL+ +G
Sbjct: 275 SQNQLGIGG-GLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG 330



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 168/370 (45%), Gaps = 37/370 (10%)

Query: 128 SNSSVFSCGSSLCGVLGHGPETTQCV--SFTRIN------FPSAAHVVQVSASENHAAFV 179
           + SSV++ G+   G LGHGP     +  ++  +       F   A +  V    +H+A +
Sbjct: 40  TQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKA-ITHVEFGASHSAAI 98

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
            + G+++  G N     G  +++     PR VEALKGV    V+ G  FT  +   G ++
Sbjct: 99  DEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMY 158

Query: 240 TCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYS 293
           + G         G LGH    D PTP+ +  L + G  ++ +  G  + +A++ +G +++
Sbjct: 159 SWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWA 218

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+G    LG+GE      P  I+ F +   +VV ++AG +   AL  +G +Y+WG    
Sbjct: 219 WGNGEYGRLGNGESDTCEVPEPIEFFSKD--NVVSIAAGRDFSFALTDNGELYSWGGNSQ 276

Query: 354 GALGHGDEID------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
             LG G  +       +++P  + +       Q+ A       + D G +Y +G      
Sbjct: 277 NQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWG------ 330

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
                   S   + P  + ++  + + Q++ G  +TV +++ G +F FG      LGH  
Sbjct: 331 --------SKIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKGSSNCLGHGD 382

Query: 468 LRGCLEPTEI 477
            +  L+P +I
Sbjct: 383 RKNQLQPVQI 392



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 21/231 (9%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G +HT+ +S +  +++ G+   G LG+G E+  C     I F S  +VV ++A  
Sbjct: 198 LTVECGEFHTVALSKDGEIWAWGNGEYGRLGNG-ESDTCEVPEPIEFFSKDNVVSIAAGR 256

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           + +  +  +G++++ G NS    G       D       P LVEA  G+  KQ+ AG + 
Sbjct: 257 DFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDH 316

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
              +T  G ++  GS    +           P  +  + E   +VQ+A G  Y +A++ N
Sbjct: 317 AAAVTDDGRLYMWGSKIWIE-----------PHEMTAVNEY-KMVQVACGRQYTVALSEN 364

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           G V++FG GS+ CLGHG++ ++LQP  I+      +++  +S GD H+ A+
Sbjct: 365 GEVFTFGKGSSNCLGHGDRKNQLQPVQIEALAD--VNITSISCGDYHMGAI 413



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 152/341 (44%), Gaps = 40/341 (11%)

Query: 120 GRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAA 177
           G  H+  I  +  ++  GS+    LG G E+++  +  R +       +V VS  +   A
Sbjct: 91  GASHSAAIDEDGKLYVWGSNEYSKLGLG-ESSEMETLPREVEALKGVKIVDVSCGDYFTA 149

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFR----PRLVEAL--KGVPCKQVTAGLNFTGF 231
            V   G++++ G   S   G         +    PRL+  L  +GVP   V  G   T  
Sbjct: 150 AVDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVA 209

Query: 232 LTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
           L+  G +   G+  +G+LG+G  DT + P P      +   +VV IAAG  +  A+T NG
Sbjct: 210 LSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKD---NVVSIAAGRDFSFALTDNG 266

Query: 290 VVYSFGSGSNFCLGHGE------QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +YS+G  S   LG G        + E  P  ++ F   G+ V +++AG +H  A+   G
Sbjct: 267 ELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFN--GLSVKQIAAGYDHAAAVTDDG 324

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            +Y WG              K   EP  ++++  +  VQV   ++ T  L + G V+ FG
Sbjct: 325 RLYMWGS-------------KIWIEPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFG 371

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                 LG  DR      L+P  +++L   +++ IS G YH
Sbjct: 372 KGSSNCLGHGDR---KNQLQPVQIEALADVNITSISCGDYH 409



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 17/206 (8%)

Query: 291 VYSFGSGSNFCLGHG--------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           VY++G+G+   LGHG          ++EL P+ ++ F  K I    V  G  H  A+D  
Sbjct: 44  VYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAI--THVEFGASHSAAIDED 101

Query: 343 GYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G +Y WG      LG G+  + +TLP  + +LK    V V      T  +   G +Y +G
Sbjct: 102 GKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWG 161

Query: 402 WMG--FGSLGFPDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTDRGRLFGFGD 457
           W G      G            PR+L +L    V    +  G +HTV ++  G ++ +G+
Sbjct: 162 WGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGN 221

Query: 458 NERAQLGHDTLRGCL--EPTEIFIQE 481
            E  +LG+     C   EP E F ++
Sbjct: 222 GEYGRLGNGESDTCEVPEPIEFFSKD 247


>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
           coralloides DSM 2259]
 gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
           2259]
          Length = 827

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 166/363 (45%), Gaps = 22/363 (6%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G+ H+L L+++ +V++ G +    LG G E     S T +  P  A V  ++A EN 
Sbjct: 482 VAAGKTHSLALLADGTVWAWGDNSFSALGLGDE--PGASPTPVQVPKLAGVRSLAAGENS 539

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
           +  VL +G V   G       G    +  IF+ P  +  L G+    V  G  ++  L  
Sbjct: 540 SLAVLANGTVMAWGYGLFGQLGSESAS--IFQIPEPIFGLSGITA--VAMGHWYSLALRE 595

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G N  GQLG G T +RP P  +A L +V     IAAG S+ LA+  +G V+++
Sbjct: 596 DGTVWSWGYNASGQLGDGTTDERPRPGQVAGLTQV---TAIAAGASHALALRADGTVWAW 652

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           GS +   LG G Q     P  +Q        V+ V+AG+ H +AL   G V++WG    G
Sbjct: 653 GSNALGTLGDGTQTSRSTPVQVQGL----TGVIAVAAGEYHSLALREDGTVWSWGNNNEG 708

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG      +  P  +  L      ++ A ++     V+ G +  FG    G LG  +R 
Sbjct: 709 QLGDVTASSRQSPGQVPGLAG--VQRIAAGEKHALAAVEGGPLVAFGKNTSGQLGLGER- 765

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             +   R  I  SLR  +   I+ G+ HT+ V   G ++ +G N   QLG+       +P
Sbjct: 766 -KENQSRGEIA-SLR--NPRGIAAGIAHTLAVAADGTVWAWGANATGQLGNGEAANSPQP 821

Query: 475 TEI 477
             +
Sbjct: 822 ITV 824



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 148/363 (40%), Gaps = 29/363 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G Y   L+ + +V S G++  G LG G      +  T    P    V  VSA E+H   V
Sbjct: 386 GYYAVALMGDGTVRSWGNNDSGQLGDG----TYIRHTPTPVPGLTGVTAVSAGEDHVVAV 441

Query: 180 LQSGQVFTCGDNSSFCCGH--RDTNR--PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           L  G     GDN     G      NR  P+  P L EA        V AG   +  L   
Sbjct: 442 LSDGSPRVWGDNQFMQLGRPPESVNRGGPVQVPGLTEA------SLVAAGKTHSLALLAD 495

Query: 236 GHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G V   G N+   LG GD     PTP  +  L  V S   +AAG +  LAV  NG V ++
Sbjct: 496 GTVWAWGDNSFSALGLGDEPGASPTPVQVPKLAGVRS---LAAGENSSLAVLANGTVMAW 552

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G G    LG         P  I  F   GI  V +  G  + +AL   G V++WG    G
Sbjct: 553 GYGLFGQLGSESASIFQIPEPI--FGLSGITAVAM--GHWYSLALREDGTVWSWGYNASG 608

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG G   ++  P  ++ L    A+   A       L   G+V+ +G    G+LG    G
Sbjct: 609 QLGDGTTDERPRPGQVAGLTQVTAI--AAGASHALALRADGTVWAWGSNALGTLG---DG 663

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
                  P  +  L    V  ++ G YH++ + + G ++ +G+N   QLG  T      P
Sbjct: 664 TQTSRSTPVQVQGLTG--VIAVAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSP 721

Query: 475 TEI 477
            ++
Sbjct: 722 GQV 724



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 148/349 (42%), Gaps = 19/349 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  H + ++S+ S    G +    LG  PE+        +  P       V+A + H
Sbjct: 431 VSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVN--RGGPVQVPGLTEASLVAAGKTH 488

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  +L  G V+  GDNS    G  D   P   P  V+  K    + + AG N +  +   
Sbjct: 489 SLALLADGTVWAWGDNSFSALGLGD--EPGASPTPVQVPKLAGVRSLAAGENSSLAVLAN 546

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   G    GQLG         P+   P+  +  +  +A G  Y LA+  +G V+S+G
Sbjct: 547 GTVMAWGYGLFGQLGSESASIFQIPE---PIFGLSGITAVAMGHWYSLALREDGTVWSWG 603

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             ++  LG G   +  +P  +         V  ++AG  H +AL + G V+ WG    G 
Sbjct: 604 YNASGQLGDGTTDERPRPGQVAGL----TQVTAIAAGASHALALRADGTVWAWGSNALGT 659

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G +  ++ P  +  L   +A  V A +  +  L + G+V+ +G    G LG  D   
Sbjct: 660 LGDGTQTSRSTPVQVQGLTGVIA--VAAGEYHSLALREDGTVWSWGNNNEGQLG--DVTA 715

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           S +   P  +  L    V +I+ G  H +   + G L  FG N   QLG
Sbjct: 716 SSR-QSPGQVPGLAG--VQRIAAGEKHALAAVEGGPLVAFGKNTSGQLG 761



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 173/395 (43%), Gaps = 35/395 (8%)

Query: 94  LRF---LQSVEHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPET 149
           LRF   ++ V   +D+   SAGN+        H L L ++ +V++ GS+  G LG G +T
Sbjct: 162 LRFDGGVRPVPGLTDVRAVSAGNE--------HALALRTDGTVWAWGSNFAGQLGDGTKT 213

Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
           ++      +       V+ VSA+   +  + + G V+  GDN S   G   T      P 
Sbjct: 214 SRSTPVQVVGL---TEVIAVSAAGYSSLALRKDGTVWAWGDNESGQLGD-GTMEGRLTP- 268

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V+ L  V    + AG   +  +   G V   G+N +GQLG G       P+ +A + ++
Sbjct: 269 -VQVLDLVRVTGLAAGRGHSLAVLADGTVRAWGANIYGQLGDGGFSLEGNPRPVA-VSKL 326

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
             VV +AA  S   AV  +G V S+GS  +  LG  ++ +   P  +         V  V
Sbjct: 327 TDVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGVEQRSNSRVPSKVFGL----TDVATV 382

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           S G  + VAL   G V +WG    G LG G  I  T P P+  L    A  V A +    
Sbjct: 383 SVGGYYAVALMGDGTVRSWGNNDSGQLGDGTYIRHT-PTPVPGLTGVTA--VSAGEDHVV 439

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVS--DKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            ++  GS   +G   F  LG P   V+    V  P + ++      S ++ G  H++ + 
Sbjct: 440 AVLSDGSPRVWGDNQFMQLGRPPESVNRGGPVQVPGLTEA------SLVAAGKTHSLALL 493

Query: 448 DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 482
             G ++ +GDN  + LG     G   PT + + ++
Sbjct: 494 ADGTVWAWGDNSFSALGLGDEPGA-SPTPVQVPKL 527



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 10/202 (4%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H L L ++ +V++ GS+  G LG G +T++    T +       V+ V+A E H
Sbjct: 633 IAAGASHALALRADGTVWAWGSNALGTLGDGTQTSRS---TPVQVQGLTGVIAVAAGEYH 689

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  + + G V++ G+N+    G   T      P  V  L GV  +++ AG          
Sbjct: 690 SLALREDGTVWSWGNNNEGQLGDV-TASSRQSPGQVPGLAGV--QRIAAGEKHALAAVEG 746

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G +   G NT GQLG G+  +  +   IA L    +   IAAG ++ LAV  +G V+++G
Sbjct: 747 GPLVAFGKNTSGQLGLGERKENQSRGEIASLR---NPRGIAAGIAHTLAVAADGTVWAWG 803

Query: 296 SGSNFCLGHGEQHDELQPRAIQ 317
           + +   LG+GE  +  QP  ++
Sbjct: 804 ANATGQLGNGEAANSPQPITVK 825



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 65/161 (40%), Gaps = 17/161 (10%)

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 388
           V+AG  H + +   G V  WG  Y          D  +  P+  L    AV   A     
Sbjct: 138 VAAGRYHSLMVRPDGTVLEWGLSYL-------RFDGGV-RPVPGLTDVRAV--SAGNEHA 187

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
             L   G+V+ +G    G LG        K  R   +  +    V  +S   Y ++ +  
Sbjct: 188 LALRTDGTVWAWGSNFAGQLGD-----GTKTSRSTPVQVVGLTEVIAVSAAGYSSLALRK 242

Query: 449 RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
            G ++ +GDNE  QLG  T+ G L P ++   ++   TGLA
Sbjct: 243 DGTVWAWGDNESGQLGDGTMEGRLTPVQVL--DLVRVTGLA 281


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 164/356 (46%), Gaps = 29/356 (8%)

Query: 132 VFSCGSSLCGVLGHGPETT----QCVSFTRINF--PSAAHVVQVSA---SENHAAFVLQS 182
           VF C S   G L   P +     Q + F  + +  P+  H V V A    E H  F+   
Sbjct: 8   VFGCASD--GQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLFLAND 65

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 243 SNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILISDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           + H        P  ++ F    + ++++SAG+   +AL +SG ++ WG+   G LG+   
Sbjct: 183 IRHS-------PAEVELF--VSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTN 233

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
            D   P  + ++ S + V+ C     +  L   G V+  G   FG LG      S   +R
Sbjct: 234 RDVINPREVPNINSVVVVE-CGDSH-SIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMR 291

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
              +  +   HV++I+ G  HT+VV + G++  FG N   QLGH   R  + P  I
Sbjct: 292 G--ITEMLGSHVTRIACGRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRMI 344



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 133/312 (42%), Gaps = 59/312 (18%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           + +G  HTL ++N   V+SCGS+  G LG G       +   ++  +A  ++Q+SA  +H
Sbjct: 52  VASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAGRSH 111

Query: 176 AAFVLQSGQVFTCGDNSS------------------------------------------ 193
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 194 -FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 252
            F  G +   R    P  VE    VP  Q++AG  FT  LT  G +   G N  GQLG+ 
Sbjct: 172 VFIWGQQSDGRIRHSPAEVELFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNF 231

Query: 253 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 312
              D   P+ +     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNRDVINPREVP---NINSVVVVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 313 PRAIQTFRR-----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PSRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 368 EPLSSLKSHLAV 379
             + S+++  +V
Sbjct: 342 RMIDSVENVASV 353



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 9/161 (5%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI+ G   T+ L ++ ++F+ G +  G LG+   T + V   R   P+   VV V   +
Sbjct: 199 IQISAGNLFTMALTASGTLFAWGRNEEGQLGNF--TNRDVINPR-EVPNINSVVVVECGD 255

Query: 174 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           +H+  +   G+VF+CG +S     CG    ++   R   +  + G    ++  G   T  
Sbjct: 256 SHSIALTHEGRVFSCGSDSFGQLGCGQPSRSQNCMRG--ITEMLGSHVTRIACGRCHT-I 312

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           +   G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 313 VVANGKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASV 353


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 24/326 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    HAA V + G VF  G+      GH   +  +  P+LV+AL GV  + V  G
Sbjct: 282 VSSIACGSRHAALVTKQGDVFCWGEEYGGRLGH-GIDVDVSEPQLVQALAGVNTELVACG 340

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T+ G ++T G++    G +GH + +    PK ++ PLE V  +  IA G  + 
Sbjct: 341 DFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGV-RISSIACGAWHT 399

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD-- 340
             V+  G +++FG G+   LGHG++ +   P+ +++   KG+  VR + G  H  A+   
Sbjct: 400 ALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESL--KGLKTVRAACGIWHTAAVVEV 457

Query: 341 ----------SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                     SSG ++TWG G    LGHGD+  K +P  +++L  +   QV      T  
Sbjct: 458 IVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVA 517

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDR 449
           L  +G V+  G   +G LG P      KV  P ++D  L    V +I  G +H   ++ +
Sbjct: 518 LTTSGRVFTMGSTIYGQLGNPK--ADGKV--PGMVDGELARTFVEEIGCGAHHVAALSSK 573

Query: 450 GRLFGFGDNERAQLGHDTLRGCLEPT 475
             ++ +G     +LGH  +     PT
Sbjct: 574 TEIYTWGKGANGRLGHGDVEDRTAPT 599



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 22/286 (7%)

Query: 106 IVETSAG-NQMQITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRINFP 161
           +V+  AG N   +  G +HT  ++ S  +++ G+     G++GH    +  +   R++ P
Sbjct: 325 LVQALAGVNTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMP-KRMSSP 383

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                +  ++    H A V  +GQ+FT GD +    GH D  R +  P+ VE+LKG+   
Sbjct: 384 LEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGD-KRNLAIPKEVESLKGLKTV 442

Query: 221 QVTAGLNFTGFLT------------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
           +   G+  T  +               G + T G     +LGHGD   +  P  +A L +
Sbjct: 443 RAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVD 502

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
             +  Q+A G S  +A+T +G V++ GS     LG+ +   ++         R    V  
Sbjct: 503 Y-NFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELAR--TFVEE 559

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           +  G  HV AL S   +YTWGKG  G LGHGD  D+T P  + +L+
Sbjct: 560 IGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALR 605



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 16/236 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G +HT L+S++  +F+ G    GVLGHG +    +    +        V+ +    H
Sbjct: 392 IACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIP-KEVESLKGLKTVRAACGIWH 450

Query: 176 AAFVLQ------------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            A V++            SG++FT GD   +  GH D  + +  P  V AL     +QV 
Sbjct: 451 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLV-PTCVAALVDYNFRQVA 509

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V T GS  +GQLG+    D   P  +        V +I  G  ++ 
Sbjct: 510 CGHSLTVALTTSGRVFTMGSTIYGQLGNPKA-DGKVPGMVDGELARTFVEEIGCGAHHVA 568

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           A++    +Y++G G+N  LGHG+  D   P  ++  R K +  V   +    V+ L
Sbjct: 569 ALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICL 624



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 25/295 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+ ++A   +    +  G      +T +G V   G    G+LGHG  +D   P+ +  L 
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 330

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            V + + +A G  +  AVT +G +Y++G+   S   +GH        P+ + +   +G+ 
Sbjct: 331 GVNTEL-VACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSS-PLEGVR 388

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           +  ++ G  H   + S+G ++T+G G  G LGHGD+ +  +P+ + SLK    V+     
Sbjct: 389 ISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGI 448

Query: 386 RKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
             T  +V+            +G ++ +G      LG  D+   ++ L P  + +L  ++ 
Sbjct: 449 WHTAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDK---EQKLVPTCVAALVDYNF 505

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL------EPTEIFIQEM 482
            Q++ G   TV +T  GR+F  G     QLG+    G +      E    F++E+
Sbjct: 506 RQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEI 560



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 4/176 (2%)

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           G G + D L P+A+Q      + V  ++ G  H   +   G V+ WG+ Y G LGHG ++
Sbjct: 261 GAGSRVDSLVPKALQAAVV--LDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDV 318

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG-FGSLGFPDRGVSDKVLR 421
           D + P+ + +L       V      T  +  +G +Y +G     G L      VS  + +
Sbjct: 319 DVSEPQLVQALAGVNTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPK 378

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            R+   L    +S I+ G +HT +V+  G+LF FGD     LGH   R    P E+
Sbjct: 379 -RMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEV 433


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 142/313 (45%), Gaps = 21/313 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  +S   NHAA + + G+VF  G+ S    GH+  +  +  P +VE+L G   K V  G
Sbjct: 307 VRNISLGRNHAALITKRGEVFCWGEGSRGKLGHK-VDMDVSSPTIVESLDGFLVKFVACG 365

Query: 226 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  LT  G +   G N +G   +    T  +  P+ I+ PL  V S+  +A G  + 
Sbjct: 366 EYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGV-SISNVACGDWHT 424

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 341
            AV+ +G ++++G G+   LGHG       P+ +++   KG+ V  V+ G  H  A+   
Sbjct: 425 AAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESL--KGLWVKSVACGSWHTAAIVDV 482

Query: 342 ----------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                      G ++TWG G  G LGH D   K  P  ++ L  H  VQV   +  T  L
Sbjct: 483 IFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLTVAL 542

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
             TG +Y  G    G LG P        +   +   L+   V +IS+G YH   +T  G 
Sbjct: 543 TRTGKIYTMGSSVHGQLGNPQAKNKSIAI---VEGKLKEEFVKEISSGSYHVAALTSGGS 599

Query: 452 LFGFGDNERAQLG 464
           ++ +G     QLG
Sbjct: 600 VYTWGKGTNGQLG 612



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 143/308 (46%), Gaps = 29/308 (9%)

Query: 103 SSDIVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-IN 159
           S  IVE+  G  ++ +  G Y T  +++S  +F  G +  G      E T      R I+
Sbjct: 347 SPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQIS 406

Query: 160 FPSA-AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
            P A   +  V+  + H A V  SGQ+FT GD +    GH +  + +  P+ VE+LKG+ 
Sbjct: 407 GPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNL-QSVSHPKEVESLKGLW 465

Query: 219 CKQVTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
            K V  G   T            F  + G + T G    G+LGH D   +  P  +A L 
Sbjct: 466 VKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLV 525

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           E    VQ++ G    +A+T  G +Y+ GS  +  LG+ +  +  +  AI   + K   V 
Sbjct: 526 E-HDFVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGNPQAKN--KSIAIVEGKLKEEFVK 582

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----------SHL 377
            +S+G  HV AL S G VYTWGKG  G LG G+  D+ +P  + +L+          S+L
Sbjct: 583 EISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNL 642

Query: 378 AVQVCARK 385
              +C  K
Sbjct: 643 TAAICLHK 650



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 126/273 (46%), Gaps = 22/273 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+L+E    +  + ++ G N    +T RG V   G  + G+LGH   +D  +P  +  L+
Sbjct: 296 PKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLD 355

Query: 268 EVGSVVQ-IAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKG 323
             G +V+ +A G     A+T +G ++ +G    G N  +       +  PR I +    G
Sbjct: 356 --GFLVKFVACGEYQTCALTDSGELFVWGENKYGGNL-VCEERTGSQWLPRQI-SGPLAG 411

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           + +  V+ GD H  A+ SSG ++T+G G  G LGHG+    + P+ + SLK      V  
Sbjct: 412 VSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVAC 471

Query: 384 RKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
               T  +VD            G ++ +G    G LG  D    +K L+P  +  L  H 
Sbjct: 472 GSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADL---EKKLQPTCVAQLVEHD 528

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             Q+S G   TV +T  G+++  G +   QLG+
Sbjct: 529 FVQVSCGRMLTVALTRTGKIYTMGSSVHGQLGN 561



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 107/235 (45%), Gaps = 20/235 (8%)

Query: 255 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 314
           +D   PK + P   +  V  I+ G ++   +T  G V+ +G GS   LGH    D   P 
Sbjct: 291 VDSLLPKLLEPTVML-DVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPT 349

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG-YCGALGHGDEI-DKTLPEPLSS 372
            +++    G  V  V+ G+    AL  SG ++ WG+  Y G L   +    + LP  +S 
Sbjct: 350 IVESL--DGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISG 407

Query: 373 LKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
             + +++  V      T  +  +G ++ +G   FG LG    G    V  P+ ++SL+  
Sbjct: 408 PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLG---HGNLQSVSHPKEVESLKGL 464

Query: 432 HVSQISTGLYHTVVVTDR-----------GRLFGFGDNERAQLGHDTLRGCLEPT 475
            V  ++ G +HT  + D            G+LF +GD ++ +LGH  L   L+PT
Sbjct: 465 WVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPT 519



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 2/171 (1%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           Q D L P+ ++      + V  +S G  H   +   G V+ WG+G  G LGH  ++D + 
Sbjct: 290 QVDSLLPKLLEPTVM--LDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSS 347

Query: 367 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           P  + SL   L   V   + +T  L D+G ++ +G   +G     +     + L  +I  
Sbjct: 348 PTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISG 407

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            L    +S ++ G +HT  V+  G+LF +GD     LGH  L+    P E+
Sbjct: 408 PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEV 458


>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
          Length = 2770

 Score =  119 bits (298), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 107/379 (28%), Positives = 168/379 (44%), Gaps = 24/379 (6%)

Query: 96  FLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF 155
           F+ S +    I  +S G+        Y   L S+ +V++ G    GVLG+G      V +
Sbjct: 627 FVPSSQEIKSIATSSGGSY------GYSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGY 680

Query: 156 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
              +      V Q+SA E H+  +   G  +  GDN+    G+  T      P  V  L 
Sbjct: 681 PVRDLTG---VEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSI-PVQVSGLT 736

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           GV    V AG   +  L   G V   G NT GQLG G T  R  P  ++ LE+V   + I
Sbjct: 737 GV--SSVKAGRLHSMALKSDGTVWAWGYNTEGQLGDGSTTQRLVPVQVSGLEDV---IAI 791

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
           +AG  + + +  +G V+++G  SN  LG+      L P  +Q     G+ ++  SAG   
Sbjct: 792 SAGDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTGSLVP--VQVPGLTGVALI--SAGTNT 847

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
             A+ S G    WG    G L  G  I + +P  +S      A+ +      + +L   G
Sbjct: 848 SAAVKSDGTALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDG 907

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           +V+G G   +G +G  +  ++D  +    + +L    V  IS GLYH++ +   G ++G+
Sbjct: 908 TVWGCGRNDYGPIG--NNSITDSKVP---VQTLGLAGVVSISAGLYHSMALKSDGTIWGW 962

Query: 456 GDNERAQLGHDTLRGCLEP 474
           G N   QLG ++    L P
Sbjct: 963 GYNGYGQLGDNSTTSRLAP 981



 Score =  101 bits (251), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 169/379 (44%), Gaps = 35/379 (9%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I+ G  H++ L S+ + +  G +  G LG+   T Q  S   +  P  + V  +SA  
Sbjct: 473 VSISAGSNHSMALKSDGTAWIWGGNSDGQLGNN-STAQ--SLVPVQVPGLSGVSAISAGN 529

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +   G V+  G NSS   G+  T   +     ++ L G     V+AG   +  L 
Sbjct: 530 YHSMALKSDGTVWAWGRNSSGQLGNNSTTVSLVP---IQVLTGT--TSVSAGTYHSMALK 584

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--------------PLEEVGSVVQIAAGP 279
             G V   G+N + ++     LD+  P   A                +E+ S+   + G 
Sbjct: 585 SDGAVWGWGNNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGS 644

Query: 280 -SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             Y LA+  +  V+++G G +  LG+G     L    +    R    V ++SAG+ H +A
Sbjct: 645 YGYSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYPV----RDLTGVEQISAGEGHSLA 700

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           L S G  + WG    G LG+   +  ++P  +S L    +V+  A +  +  L   G+V+
Sbjct: 701 LRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQVSGLTGVSSVK--AGRLHSMALKSDGTVW 758

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G+   G LG    G + + L P  +  L    V  IS G YH++V+   G ++ +G N
Sbjct: 759 AWGYNTEGQLG---DGSTTQRLVPVQVSGLE--DVIAISAGDYHSMVIKSDGTVWAWGRN 813

Query: 459 ERAQLGHDTLRGCLEPTEI 477
              QLG+++  G L P ++
Sbjct: 814 SNGQLGNNSTTGSLVPVQV 832



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 122/259 (47%), Gaps = 16/259 (6%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           QV AG      L   G V   G N +G+LG G T++R  P  ++ L EV +   I+A   
Sbjct: 272 QVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQVSGLTEVSA---ISAAFG 328

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +A+  +G ++++G  +   LG+      L P  + T       V  +SAG ++ +A+ 
Sbjct: 329 HSMALKSDGTLWTWGYNNRGQLGNNSITQSLVPVQVLT------GVASISAGYDYSLAVK 382

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR--KTFVLVDTGSVY 398
           S G V+ WG+ Y G  G+   ID  +P  +S L    ++   +      +  L   G+V+
Sbjct: 383 SDGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVW 442

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           G+G+   G LG      + + L P  + +L    V  IS G  H++ +   G  + +G N
Sbjct: 443 GWGYNSTGQLG---NNSATQSLVP--VQALGLTGVVSISAGSNHSMALKSDGTAWIWGGN 497

Query: 459 ERAQLGHDTLRGCLEPTEI 477
              QLG+++    L P ++
Sbjct: 498 SDGQLGNNSTAQSLVPVQV 516


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 11  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 70

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 325
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 71  STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 127

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 384
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 128 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 187

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 188 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 247

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRG 470
           V+T+ G++F FG +   QL H    G
Sbjct: 248 VLTEDGQVFTFGGSSSEQLQHSPRSG 273



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 172
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 24  LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 81

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 82  KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 141

Query: 233 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 142 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 200

Query: 292 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 201 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 258

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 259 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 311



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 147/306 (48%), Gaps = 14/306 (4%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 14  RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 72

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 275
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 73  VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 131

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 334
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 132 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 189

Query: 335 HVVALDSSGYVYTWGKGYCGALG-HGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVL 391
           H  AL   G  + WG    G L   G+   + +  P  + +LK+   V +      T VL
Sbjct: 190 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 249

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 450
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 250 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 305

Query: 451 RLFGFG 456
           ++   G
Sbjct: 306 QVVSLG 311



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 129 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 188

Query: 174 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 189 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 248

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 273
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 249 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 308

Query: 274 QIAAGPS 280
            +  GPS
Sbjct: 309 SLGRGPS 315


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 159/354 (44%), Gaps = 34/354 (9%)

Query: 126 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + ++++V + GS   G LG G  +  + V       P A   V VS S N  A +   G 
Sbjct: 1   MAASTTVIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSV-VSGSRNSLA-ICDDGT 58

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 245 THGQLGH---GDTLDRP------TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            +GQ G     D ++RP       PK  AP      V Q+AAG ++ + +T  G V+S+G
Sbjct: 119 EYGQCGEEPGKDEMERPLRRDIVIPKRCAPKL---VVRQVAAGGTHSVVLTREGHVWSWG 175

Query: 296 SGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 350
                            P  I+      R +G+  VR ++ G  H +AL+ +G ++ WG 
Sbjct: 176 Q-------------PWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWGN 222

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG GD   ++ P P+  L S   V + A    +  L D G VYG+G    G LGF
Sbjct: 223 NEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGF 282

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            D   S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG
Sbjct: 283 GDNDKSSKML-PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG 335



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 134/309 (43%), Gaps = 32/309 (10%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           + +G  ++L I  + ++F+ G +  G LGH PET      +++   +   +VQ +    H
Sbjct: 43  VVSGSRNSLAICDDGTLFTWGWNQRGTLGHPPETKTENIPSQVKALANVKIVQAAIGGWH 102

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFR---------PRLVEALKGVPCKQV 222
              V   G+ +  G N    CG      +  RP+ R         P+LV        +QV
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLV-------VRQV 155

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            AG   +  LT  GHV + G         GD      P  +  LE   +V  IA G  + 
Sbjct: 156 AAGGTHSVVLTREGHVWSWGQ----PWPPGDIKQISIPVRVQGLE---NVRLIAVGAFHN 208

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           LA+  NG ++++G+     LG G+     QP  +Q      + +V ++AG  H  AL   
Sbjct: 209 LALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGL--DSLTLVDIAAGGWHSTALTDK 266

Query: 343 GYVYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           G VY WG+G  G LG G  D+  K LP+ ++ L     +QV      +  L   G ++ F
Sbjct: 267 GEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSF 326

Query: 401 GWMGFGSLG 409
           G    G LG
Sbjct: 327 GRGDHGRLG 335



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 2/135 (1%)

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           + +S  V  WG G  G LG G   +K     + +L+ +    V +  R +  + D G+++
Sbjct: 1   MAASTTVIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLF 60

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +GW   G+LG P    ++ +  P  + +L    + Q + G +H + V D+GR + +G N
Sbjct: 61  TWGWNQRGTLGHPPETKTENI--PSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 459 ERAQLGHDTLRGCLE 473
           E  Q G +  +  +E
Sbjct: 119 EYGQCGEEPGKDEME 133



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 7/161 (4%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N   I  G +H L L  N ++++ G++  G LG G +T        +    +  +V ++A
Sbjct: 197 NVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTG-DTQPRSQPIPVQGLDSLTLVDIAA 255

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTG 230
              H+  +   G+V+  G       G  D ++     P+ V  L G    QV+ G   + 
Sbjct: 256 GGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSV 315

Query: 231 FLTIRGHVHTCGSNTHGQLGHGD--TLDRP--TPKSIAPLE 267
            LT  G + + G   HG+LG G   T  +P   P  I P E
Sbjct: 316 ALTRDGRIFSFGRGDHGRLGCGRKVTTGQPLDVPVKIPPPE 356


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  119 bits (297), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 89/292 (30%), Positives = 139/292 (47%), Gaps = 14/292 (4%)

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
            S + VV VS    H A V  +G++ T G   +   GH DTN  I  P+++++L      Q
Sbjct: 802  SLSDVVSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQI-EPKIIQSLTSFWITQ 860

Query: 222  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            V  G   T  LT  G V++ G++ +GQLG GD     +P  ++ LE+  +V+QIA+G ++
Sbjct: 861  VQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKY-NVLQIASGSTH 919

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
               +T +  V  FG+G+            L P        K +H+ R+  G     A+  
Sbjct: 920  CAVLTTSKEVLVFGNGAAMGAASVVSLPTLVPSL------KYLHIDRLCCGHYSTAAITE 973

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G VYTWG G    LGHG    +T P+ + +L++    Q+    R T  L D+G ++  G
Sbjct: 974  CGDVYTWGTGQ--ELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCG 1031

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
               FG LG     +S    +P+ ++SL       +S G  + V + D  R F
Sbjct: 1032 KDSFGQLG----QMSGDQNKPKRIESLTKTTFISVSCGENYNVALFDTTRSF 1079



 Score =  100 bits (248), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 122/260 (46%), Gaps = 18/260 (6%)

Query: 208  PRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P  +E+L  V    V+  + F     +R  G + T G   +GQLGHGDT ++  PK I  
Sbjct: 797  PFKLESLSDV----VSVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQS 852

Query: 266  LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
            L     + Q+  G  + + +T NG VYS+G+     LG G+      P  +    +   +
Sbjct: 853  LTSFW-ITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEK--YN 909

Query: 326  VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
            V+++++G  H   L +S  V  +G G   A+G    +  +LP  + SLK     ++C   
Sbjct: 910  VLQIASGSTHCAVLTTSKEVLVFGNG--AAMGAASVV--SLPTLVPSLKYLHIDRLCCGH 965

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
              T  + + G VY   W     LG    G +     P+++++LR   + QIS G  HT  
Sbjct: 966  YSTAAITECGDVYT--WGTGQELG---HGGNSTETSPKLIEALRNQSIRQISCGGRHTAF 1020

Query: 446  VTDRGRLFGFGDNERAQLGH 465
            +TD GR+F  G +   QLG 
Sbjct: 1021 LTDSGRIFTCGKDSFGQLGQ 1040



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 17/233 (7%)

Query: 233 TIRGHVHTCGSNTHGQLGHGDTL---DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
           T RG + T GS ++ +LG   T     +PTP+ + P   +  +  I++G  Y   +T NG
Sbjct: 711 TSRG-LMTWGSASNCKLGFKVTAKDQSQPTPERL-PNFNIPDICSISSGSYYSSVLTENG 768

Query: 290 VVYSFGSGSNFC-----LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            VY +G G+        LG  +  D+L P  +++       VV VS G  H  A+ ++G 
Sbjct: 769 DVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLS----DVVSVSIGFCHGAAVRANGE 824

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           + TWG G  G LGHGD  ++  P+ + SL S    QV   ++ T  L   G VY +G   
Sbjct: 825 LLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASE 884

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           +G LG  D         P  + +L  ++V QI++G  H  V+T    +  FG+
Sbjct: 885 YGQLGLGDVTQHSS---PMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN 934



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 49/216 (22%)

Query: 116  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
            Q+  G  HT+ L  N  V+S G+S  G LG G + TQ  S  +++     +V+Q+++   
Sbjct: 860  QVQCGEKHTICLTKNGKVYSWGASEYGQLGLG-DVTQHSSPMQVSALEKYNVLQIASGST 918

Query: 175  HAAFVLQSGQVFTCGDNSS-----------------------FCCGHRDT---------- 201
            H A +  S +V   G+ ++                        CCGH  T          
Sbjct: 919  HCAVLTTSKEVLVFGNGAAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVY 978

Query: 202  ------------NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
                        N     P+L+EAL+    +Q++ G   T FLT  G + TCG ++ GQL
Sbjct: 979  TWGTGQELGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQL 1038

Query: 250  GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            G     D+  PK I  L +  + + ++ G +Y +A+
Sbjct: 1039 GQMSG-DQNKPKRIESLTKT-TFISVSCGENYNVAL 1072



 Score = 50.4 bits (119), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 19/182 (10%)

Query: 293 SFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
           ++GS SN  LG     +   +  P  +  F    I  +   +    V  L  +G VY WG
Sbjct: 717 TWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSV--LTENGDVYLWG 774

Query: 350 KGYCGA-----LGHGDEIDKTLPEPLSSLKSHLAVQV--CARKRKTFVLVDTGSVYGFGW 402
           +G         LG     D+ LP  L SL   ++V +  C        +   G +  +G 
Sbjct: 775 RGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSVSIGFC----HGAAVRANGELLTWGV 830

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
              G LG  D   ++  + P+I+ SL +  ++Q+  G  HT+ +T  G+++ +G +E  Q
Sbjct: 831 GENGQLGHGD---TNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQ 887

Query: 463 LG 464
           LG
Sbjct: 888 LG 889



 Score = 42.4 bits (98), Expect = 0.51,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 9/154 (5%)

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           S      + LD+S  + TWG      LG      +  +  PE L +        + +   
Sbjct: 700 STAHRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSY 759

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGV---SDKVLRPRILDSLRAHHVSQISTGLYHT 443
            + VL + G VY +G     +   P  G+    D++L P  L+SL    V  +S G  H 
Sbjct: 760 YSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLL-PFKLESLS--DVVSVSIGFCHG 816

Query: 444 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             V   G L  +G  E  QLGH      +EP  I
Sbjct: 817 AAVRANGELLTWGVGENGQLGHGDTNNQIEPKII 850


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 19/314 (6%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+A V + G+VFT G+ +    G     + + +PRLVEAL       V  G   T  +T+
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLG-LGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++T G   H  G LG+G  +    PK I+ + E   V  +A GP +   ++  G ++
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 366

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----------- 341
           +FG G+   LGHG++     PR + +    G+  + V+ G  H  A+             
Sbjct: 367 TFGDGTFGVLGHGDKXSISYPREVDSL--TGLRTIAVACGVWHTAAVVEVIMTQSSTSIP 424

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           SG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  L  +G V+  G
Sbjct: 425 SGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVG 484

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
              +G LG P        L   + D L      +++ G YH +V+T +  ++ +G     
Sbjct: 485 SSVYGQLGNPHADGKQPCL---VEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANG 541

Query: 462 QLGHDTLRGCLEPT 475
           +LGH  +     PT
Sbjct: 542 RLGHGDVEDRKSPT 555



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 127/281 (45%), Gaps = 19/281 (6%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSL--CGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G +HT  ++ +  +++ G  +   G+LG+G + +  +            V  V+   
Sbjct: 294 VACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGP 353

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H A +  +GQ+FT GD +    GH D    I  PR V++L G+    V  G+  T  + 
Sbjct: 354 WHTALISSTGQLFTFGDGTFGVLGHGD-KXSISYPREVDSLTGLRTIAVACGVWHTAAVV 412

Query: 234 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
                        G + T G     +LGHGD   R  P  +  L +  +  +IA G S  
Sbjct: 413 EVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY-NFHKIACGHSIT 471

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           + +T +G V++ GS     LG+    D  QP  ++  +  G     V+ G  HV+ L S 
Sbjct: 472 IGLTTSGQVFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVACGAYHVMVLTSK 529

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 382
             VYTWGKG  G LGHGD  D+  P  + SLK  H+ +  C
Sbjct: 530 NEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 570



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 23/238 (9%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           +  G +HT LIS++  +F+ G    GVLGHG + +  +S+ R ++  +    + V+    
Sbjct: 349 VACGPWHTALISSTGQLFTFGDGTFGVLGHGDKXS--ISYPREVDSLTGLRTIAVACGVW 406

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 407 HTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 465

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            G + T  LT  G V T GS+ +GQLG  H D   +P       L E  S  ++A G  +
Sbjct: 466 CGHSITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGE--SAEEVACGAYH 522

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           ++ +T    VY++G G+N  LGHG+  D   P  +++ + K  HV  ++ G  +  A+
Sbjct: 523 VMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDK--HVKIIACGSNYSAAI 578



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
           +  +  +T +G V T G  T G+LG G   D   P+ +  L    +V  +A G  +  AV
Sbjct: 246 IRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAAT-TVDLVACGEFHTCAV 304

Query: 286 TGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           T +G +Y++G G +    LG+G       P+ I     +G+ V  V+ G  H   + S+G
Sbjct: 305 TMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGIL-EGLQVAYVACGPWHTALISSTG 363

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-----------HLAVQVCARKRKTFVLV 392
            ++T+G G  G LGHGD+   + P  + SL             H A  V     ++   +
Sbjct: 364 QLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSI 423

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G ++ +G      LG  D+   +  L+P  + +L  ++  +I+ G   T+ +T  G++
Sbjct: 424 PSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQV 480

Query: 453 FGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 484
           F  G +   QLG+   D  + CL   ++  +  EE
Sbjct: 481 FTVGSSVYGQLGNPHADGKQPCLVEDKLLGESAEE 515


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 157/326 (48%), Gaps = 21/326 (6%)

Query: 160 FPSAAHVV---QVSASENHAAFVLQSGQ-VFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL 214
           +P++A V+    VSA  +H+  VL S Q V+  GDN++   G    T R    P      
Sbjct: 63  YPASAAVLGEAAVSAGGSHS-LVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPA----- 116

Query: 215 KGVP-CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           +G+P   QV+AG + +  LT  G V   G N+ GQLG G T D  TP  +  L    ++ 
Sbjct: 117 QGLPSVAQVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIK 176

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            +AAG ++ LA+T +G V+++G  S+  LG+    D   P  +Q       +V  V+AG 
Sbjct: 177 VVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA---NVTAVAAGG 233

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLV 392
            H +AL S G +Y WG    G LG G   + + P  ++ L +    V V A K  +  L+
Sbjct: 234 NHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALM 293

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
             G+VY +G   +G LG    G +     P  +  L   +V+ +S G   ++ +T  G +
Sbjct: 294 QDGTVYAWGGNSYGQLG---NGTTTASEMPVQVTGL--ANVTAVSAGGSDSLALTSDGYV 348

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIF 478
           + +G N   QLG  T      P  +F
Sbjct: 349 YAWGLNSSGQLGDGTTSNRNTPVRVF 374



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 139/300 (46%), Gaps = 15/300 (5%)

Query: 114 QMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
           +  ++ G  H+L L S+ +V++ G +  G LG G  T +         PS   V QVSA 
Sbjct: 72  EAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPS---VAQVSAG 128

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           E+H+  +   G+VF  G NSS   G     D+  P+    L         K V AG N +
Sbjct: 129 ESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDST---IKVVAAGGNHS 185

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT  G V   G N+ GQLG+  T+D   P  +  L    +V  +AAG ++ LA+T +G
Sbjct: 186 LALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA--NVTAVAAGGNHSLALTSDG 243

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            +Y++G  S+  LG G   +   P  +      G   V VSAG +H +AL   G VY WG
Sbjct: 244 RIYAWGLNSSGQLGDGTTSNSSTPVLVAGL-PAGSKPVAVSAGKDHSLALMQDGTVYAWG 302

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               G LG+G      +P  ++ L +  A  V A    +  L   G VY +G    G LG
Sbjct: 303 GNSYGQLGNGTTTASEMPVQVTGLANVTA--VSAGGSDSLALTSDGYVYAWGLNSSGQLG 360



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 119/258 (46%), Gaps = 17/258 (6%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q++ G  H+L L  +  VF+ G +  G LG G               + + +  V+A  N
Sbjct: 124 QVSAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGN 183

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCK--QVTAGLNFT 229
           H+  +   G+VF  G NSS   G+    D++ P+        ++G+P     V AG N +
Sbjct: 184 HSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPV-------QVQGLPANVTAVAAGGNHS 236

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT  G ++  G N+ GQLG G T +  TP  +A L      V ++AG  + LA+  +G
Sbjct: 237 LALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDG 296

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VY++G  S   LG+G       P  +        +V  VSAG    +AL S GYVY WG
Sbjct: 297 TVYAWGGNSYGQLGNGTTTASEMPVQVTGLA----NVTAVSAGGSDSLALTSDGYVYAWG 352

Query: 350 KGYCGALGHGDEIDKTLP 367
               G LG G   ++  P
Sbjct: 353 LNSSGQLGDGTTSNRNTP 370



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 7/178 (3%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N   +  G  H+L L S+  +++ G +  G LG G  +           P+ +  V VSA
Sbjct: 225 NVTAVAAGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSA 284

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            ++H+  ++Q G V+  G NS    G+  T      P  V  L  V    V+AG + +  
Sbjct: 285 GKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASEM-PVQVTGLANVTA--VSAGGSDSLA 341

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV---VQIAAGPSYMLAVT 286
           LT  G+V+  G N+ GQLG G T +R TP  +  +   G++   +Q++ G S  +A++
Sbjct: 342 LTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSSNPIALS 399


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 131/276 (47%), Gaps = 12/276 (4%)

Query: 194 FCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
           FC G   R+  R     R  E   G    Q  +G   +  L     V +CG N+ GQLG 
Sbjct: 3   FCWGADSRELQR-----RRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR 57

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-E 310
                   P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE  +  
Sbjct: 58  RGAPRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEIS 116

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEP 369
             P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ 
Sbjct: 117 FTPKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQR 174

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           + SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALK 234

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 235 NLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGEL-PEPIQALETLNVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V    I+D L    VSQ+  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLV---EIIDGL----VSQVDCGSYHTLAYVHTTGQVVS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 132/298 (44%), Gaps = 21/298 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S G EH   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGK 256

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFG 401
           V+T+G    G LG+    +K  P+ L  +   L  QV      T   V  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQ-LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  119 bits (297), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 18/304 (5%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V +S  ++H+AFV + G++F  GDN+    G +    P+ +P  V+ LKG   + V  G 
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQ-IKGPVTKPVCVKVLKGERAQSVACGT 95

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           + T   T +G +   G N+ GQLG G   D  + + + P  +   +  ++AG     A+T
Sbjct: 96  DHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALT 155

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++ +G  S   LG G     L P+ +      G  +  VS G  H   +  SG VY
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPQELNM----GQSIHWVSCGYRHSALVTDSGDVY 211

Query: 347 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG---FG 401
           T+G+   G LG       + + P+ + SL+S L V  C  K    +  D    +G   FG
Sbjct: 212 TFGESADGRLGLSAHQLANHSYPQRVESLRSVLQV-ACGGKHTLALTEDELYCFGGGEFG 270

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
            +G G L F    V+D    P  +   R   V+ ++ G  H+ ++TD G L+ FGD    
Sbjct: 271 QLGLGMLVF----VADS---PVAVGHFRKDRVTHVTCGEQHSALITDSGLLYTFGDGRHG 323

Query: 462 QLGH 465
           +LGH
Sbjct: 324 KLGH 327



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 79/261 (30%), Positives = 126/261 (48%), Gaps = 16/261 (6%)

Query: 107 VETSAGNQMQ-ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSA 163
           V+   G + Q +  G  HTL+  S   + + G +  G LG G      +SF R+  F   
Sbjct: 80  VKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLG-HCNDSISFQRLRPFCDY 138

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +  +SA ++ +A + + G++F  GDNS+   G  + +  +  P+  E   G     V+
Sbjct: 139 APIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALL-PQ--ELNMGQSIHWVS 195

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            G   +  +T  G V+T G +  G+LG       +   P+ +   E + SV+Q+A G  +
Sbjct: 196 CGYRHSALVTDSGDVYTFGESADGRLGLSAHQLANHSYPQRV---ESLRSVLQVACGGKH 252

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            LA+T + + Y FG G    LG G        P A+  FR+    V  V+ G++H   + 
Sbjct: 253 TLALTEDEL-YCFGGGEFGQLGLGMLVFVADSPVAVGHFRKD--RVTHVTCGEQHSALIT 309

Query: 341 SSGYVYTWGKGYCGALGHGDE 361
            SG +YT+G G  G LGHGDE
Sbjct: 310 DSGLLYTFGDGRHGKLGHGDE 330



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 17/220 (7%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L  +  +F  G +  G LG G ++   +    +N   + H   VS    H+A V  SG V
Sbjct: 154 LTEDGRLFLWGDNSAGQLGFGNDSHALLP-QELNMGQSIH--WVSCGYRHSALVTDSGDV 210

Query: 186 FTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           +T G+++    G   H+  N     P+ VE+L+ V   QV  G   T  LT    ++  G
Sbjct: 211 YTFGESADGRLGLSAHQLANHSY--PQRVESLRSV--LQVACGGKHTLALT-EDELYCFG 265

Query: 243 SNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
               GQLG G       +P ++    +   V  +  G  +   +T +G++Y+FG G +  
Sbjct: 266 GGEFGQLGLGMLVFVADSPVAVGHFRK-DRVTHVTCGEQHSALITDSGLLYTFGDGRHGK 324

Query: 302 LGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           LGHG+++  ++  P   Q F      V+ V+ G  H++  
Sbjct: 325 LGHGDENFTNQFTPTVCQRFFEYS--VMTVACGSSHMLVF 362



 Score = 45.8 bits (107), Expect = 0.044,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 2/151 (1%)

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           V +S G  H   +   G ++ +G    G LG   +   T P  +  LK   A  V     
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTD 96

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            T V    G +   G    G LG      +D +   R+        +  +S G + +  +
Sbjct: 97  HTLVSTSQGEILAAGGNSDGQLGLGH--CNDSISFQRLRPFCDYAPIKLLSAGDHTSAAL 154

Query: 447 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T+ GRLF +GDN   QLG       L P E+
Sbjct: 155 TEDGRLFLWGDNSAGQLGFGNDSHALLPQEL 185



 Score = 40.0 bits (92), Expect = 2.6,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 42/105 (40%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 157
           Q   HS      S  + +Q+  G  HTL ++   ++  G    G LG G       S   
Sbjct: 227 QLANHSYPQRVESLRSVLQVACGGKHTLALTEDELYCFGGGEFGQLGLGMLVFVADSPVA 286

Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 202
           +       V  V+  E H+A +  SG ++T GD      GH D N
Sbjct: 287 VGHFRKDRVTHVTCGEQHSALITDSGLLYTFGDGRHGKLGHGDEN 331


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 161/369 (43%), Gaps = 34/369 (9%)

Query: 126 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + S +SV + GS   G LG G  E  +  S      P     V V  S N  A +   G+
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSV-VGGSRNSLA-ICDDGK 58

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +FT G N     GH    +    P LV++L  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 245 THGQLGHGDTLD---RPT------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            +GQ G   + D   RP       PK  AP     +V Q+AAG ++ + +T  G V+++G
Sbjct: 119 EYGQCGEEPSKDETGRPVRRDIVIPKRCAPQL---TVRQVAAGGTHSVVLTREGYVWTWG 175

Query: 296 SGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 350
                            P  I+      R +G+  VR ++ G  H +AL   G ++ WG 
Sbjct: 176 Q-------------PWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGN 222

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG GD   ++ P P+  L     V + A    +  L + G VYG+G    G LGF
Sbjct: 223 NEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGF 282

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
            D   S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+     
Sbjct: 283 GDNDKSSKML-PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT 341

Query: 471 CLEPTEIFI 479
             +P E+ I
Sbjct: 342 TGQPLELPI 350


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 207 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 324
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 383
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+     QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
               +F L  TG+ +G+G    G L      V +++ +P  + +L+   V  IS G  HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247

Query: 444 VVVTDRGRLFGFGDNERAQL 463
            V+T+ G++F FG N   QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 139/307 (45%), Gaps = 27/307 (8%)

Query: 109 TSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINF 160
           TS    +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++      
Sbjct: 19  TSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN------ 72

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
               HV  VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   
Sbjct: 73  --DLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           QV+ G   +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG 
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGG 189

Query: 280 SYMLAVTGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDE 334
           ++  A++  G   SFG GSN      L   +  +++ +P +I     K + V+ +S G E
Sbjct: 190 THSFALSLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYE 245

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L   G V+T+G    G L       +  P+ +  +   ++   CA       +  T
Sbjct: 246 HTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTT 305

Query: 395 GSVYGFG 401
           G V   G
Sbjct: 306 GQVVSLG 312



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 15/247 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G+ H++ + +   VF+ G+   G LG G         T+I   +   ++QVS    H
Sbjct: 79  VSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 138

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  + + G VF+ G NS    G    +R    P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 139 SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT 198

Query: 236 GHVHTCGSNTHGQLG-HGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           G     GSN  GQL   G+ +      P SI  L+ + SV+ I+ G  +   +T  G V+
Sbjct: 199 GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVF 257

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +FG  S+  L    +  +  P+ I+     G  V ++     H +A     YVYT G+  
Sbjct: 258 TFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA-----YVYTTGQ-- 307

Query: 353 CGALGHG 359
             +LG G
Sbjct: 308 VVSLGRG 314



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 4/143 (2%)

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQV 381
           GI +++ ++G+ H + L S+  VY+ G    G LG   +     PEP+ +L   H+ +  
Sbjct: 21  GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS 80

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
           C  K  +  +   G V+ +G    G LG  +    +    P  + +L    + Q+S G Y
Sbjct: 81  CG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHY 137

Query: 442 HTVVVTDRGRLFGFGDNERAQLG 464
           H++ +++ G +F +G N   QLG
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLG 160


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 207 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           +PR ++A   G+   Q  +G + +  L     V++CG N+ GQLG         P+ I  
Sbjct: 11  KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 324
           L ++  V  ++ G  + +AV   G V+++G+GS   LG GE +     P  I+     GI
Sbjct: 71  LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 383
            +++VS G  H +AL   G+V++WG+   G LG G +   + +P+ + SL+     QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
               +F L  TG+ +G+G    G L      V +++ +P  + +L+   V  IS G  HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247

Query: 444 VVVTDRGRLFGFGDNERAQL 463
            V+T+ G++F FG N   QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 139/307 (45%), Gaps = 27/307 (8%)

Query: 109 TSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINF 160
           TS    +Q  +G +H+LL+ SN  V+SCG +  G LG         PE  Q ++      
Sbjct: 19  TSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN------ 72

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
               HV  VS  + H+  V   G+VF  G  S    G  +     F P  ++AL G+   
Sbjct: 73  --DLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           QV+ G   +  L+  GHV + G N+ GQLG G ++  +  P+ +  LE +  + Q+AAG 
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGG 189

Query: 280 SYMLAVTGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDE 334
           ++  A++  G   SFG GSN      L   +  +++ +P +I     K + V+ +S G E
Sbjct: 190 THSFALSLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYE 245

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L   G V+T+G    G L       +  P+ +  +   ++   CA       +  T
Sbjct: 246 HTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTT 305

Query: 395 GSVYGFG 401
           G V   G
Sbjct: 306 GQVVSLG 312



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 4/143 (2%)

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQV 381
           GI +++ ++G+ H + L S+  VY+ G    G LG   +     PEP+ +L   H+ +  
Sbjct: 21  GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS 80

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
           C  K  +  +   G V+ +G    G LG  +    +    P  + +L    + Q+S G Y
Sbjct: 81  CG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHY 137

Query: 442 HTVVVTDRGRLFGFGDNERAQLG 464
           H++ +++ G +F +G N   QLG
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLG 160


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 131/276 (47%), Gaps = 12/276 (4%)

Query: 194 FCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
           FC G   R+  R     R  E   G    Q  +G   +  L     V +CG N+ GQLG 
Sbjct: 3   FCWGADSRELQR-----RRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR 57

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-E 310
                   P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE  +  
Sbjct: 58  RGAPRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEIS 116

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEP 369
             P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ 
Sbjct: 117 FTPKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQR 174

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           + SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALK 234

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 235 NLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGEL-PEPIQALETLNVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V    I+D L    VSQ+  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLV---EIIDGL----VSQVDCGSYHTLAYVHTTGQVVS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 132/298 (44%), Gaps = 21/298 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S G EH   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGK 256

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV-DTGSVYGFG 401
           V+T+G    G LG+    +K  P+ L  +   L  QV      T   V  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQ-LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 19/314 (6%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+A V + G+VFT G+ +    G     + + +PRLVEAL       V  G   T  +T+
Sbjct: 287 HSAIVTRQGEVFTWGEETGGRLG-LGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 345

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++T G   H  G LG+G  +    PK I+ + E   V  +A GP +   ++  G ++
Sbjct: 346 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 405

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS----------- 341
           +FG G+   LGHG++     PR + +    G+  + V+ G  H  A+             
Sbjct: 406 TFGDGTFGVLGHGDKKSISYPREVDSL--TGLRTIAVACGVWHTAAVVEVIMTQSSTSIP 463

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           SG ++TWG G    LGHGD+  +  P  + +L  +   ++      T  L  +G V+  G
Sbjct: 464 SGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVG 523

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
              +G LG P        L   + D L      +++ G YH +V+T +  ++ +G     
Sbjct: 524 SSVYGQLGNPHADGKQPCL---VEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANG 580

Query: 462 QLGHDTLRGCLEPT 475
           +LGH  +     PT
Sbjct: 581 RLGHGDVEDRKSPT 594



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 133/293 (45%), Gaps = 20/293 (6%)

Query: 106 IVETSAGNQMQITT-GRYHTLLIS-NSSVFSCGSSL--CGVLGHGPETTQCVSFTRINFP 161
           +VE  A   + +   G +HT  ++ +  +++ G  +   G+LG+G + +  +        
Sbjct: 321 LVEALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGIL 380

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               V  V+    H A +  +GQ+FT GD +    GH D  + I  PR V++L G+    
Sbjct: 381 EGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHGD-KKSISYPREVDSLTGLRTIA 439

Query: 222 VTAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           V  G+  T  +              G + T G     +LGHGD   R  P  +  L +  
Sbjct: 440 VACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY- 498

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           +  +IA G S  + +T +G V++ GS     LG+    D  QP  ++  +  G     V+
Sbjct: 499 NFHKIACGHSITIGLTTSGQVFTVGSSVYGQLGN-PHADGKQPCLVED-KLLGESAEEVA 556

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVC 382
            G  HV+ L S   VYTWGKG  G LGHGD  D+  P  + SLK  H+ +  C
Sbjct: 557 CGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIAC 609



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 116/238 (48%), Gaps = 23/238 (9%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASEN 174
           +  G +HT LIS++  +F+ G    GVLGHG +  + +S+ R ++  +    + V+    
Sbjct: 388 VACGPWHTALISSTGQLFTFGDGTFGVLGHGDK--KSISYPREVDSLTGLRTIAVACGVW 445

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A V++           SG++FT GD      GH D   P  +P  V AL      ++ 
Sbjct: 446 HTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGD-KEPRLKPTCVPALIDYNFHKIA 504

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            G + T  LT  G V T GS+ +GQLG  H D   +P       L E  S  ++A G  +
Sbjct: 505 CGHSITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGE--SAEEVACGAYH 561

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           ++ +T    VY++G G+N  LGHG+  D   P  +++ + K  HV  ++ G  +  A+
Sbjct: 562 VMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDK--HVKIIACGSNYSAAI 617



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 21/296 (7%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  P+ +E+   +  + +  G+  +  +T +G V T G  T G+LG G   D   P+ + 
Sbjct: 264 VLLPKPLESNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVE 323

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L    +V  +A G  +  AVT +G +Y++G G +    LG+G       P+ I     +
Sbjct: 324 ALAAT-TVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGIL-E 381

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS------- 375
           G+ V  V+ G  H   + S+G ++T+G G  G LGHGD+   + P  + SL         
Sbjct: 382 GLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVA 441

Query: 376 ----HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
               H A  V     ++   + +G ++ +G      LG  D+   +  L+P  + +L  +
Sbjct: 442 CGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDK---EPRLKPTCVPALIDY 498

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 484
           +  +I+ G   T+ +T  G++F  G +   QLG+   D  + CL   ++  +  EE
Sbjct: 499 NFHKIACGHSITIGLTTSGQVFTVGSSVYGQLGNPHADGKQPCLVEDKLLGESAEE 554



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 12/127 (9%)

Query: 340 DSSGYVYTWGK---------GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           D+ G ++ WG+         G   A       D  LP+PL S     A  +    R + +
Sbjct: 231 DALGDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAI 290

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V+ +G    G LG    G+   V +PR++++L A  V  ++ G +HT  VT  G
Sbjct: 291 VTRQGEVFTWGEETGGRLGL---GMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDG 347

Query: 451 RLFGFGD 457
            L+ +GD
Sbjct: 348 ELYTWGD 354


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 147/321 (45%), Gaps = 11/321 (3%)

Query: 161  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
            P  +   QV   +N +  +  +G V   G+      G  +++  +F P ++ A +G    
Sbjct: 3708 PCLSQTQQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDD-LFVPTIISAFQGYVVT 3766

Query: 221  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            Q+       G    LT  G V + G    G+LGHG+   +  PK I  L+    VVQ+A 
Sbjct: 3767 QLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQG-EDVVQLAC 3825

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
            G  +   VT +G +++FGSG +  LG     +++QP  +     +G HV +VS G  H +
Sbjct: 3826 GFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAAL--EGYHVGQVSCGLNHTL 3883

Query: 338  ALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
             L   G  V+ +G G  G LG G    K  P+ +  L +    +VC   + + VL   G 
Sbjct: 3884 VLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGH 3943

Query: 397  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            VY FG      +G PD  + ++   P+++ SL    +  I+ G  H + ++  G ++ +G
Sbjct: 3944 VYTFGQERL--IGLPDSMLKNRS-NPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWG 4000

Query: 457  DNERAQLGHDTLRGCLEPTEI 477
             N   QLG        EPT I
Sbjct: 4001 CNSEGQLGLGHCNLVKEPTLI 4021



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 150/342 (43%), Gaps = 18/342 (5%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 173
           I  G+Y T  +S + SV +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 374 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSD 433

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFL 232
            H   +   G+VF+ GD      GH ++    + P++V+  L        +AG   +  +
Sbjct: 434 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKY-PKIVQGPLFSKIVVSASAGYRHSAAV 492

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 291
           T  G ++T G    G+LGH D+  R TP  +  +  VG   Q+A G S+ +AV  +G  +
Sbjct: 493 TNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVG---QVACGSSHTIAVAQDGRTM 549

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 550 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 607

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
            C   G   E     P  +  L     + +         L     VY +G    G  G  
Sbjct: 608 SCLGCG-SSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCG-- 664

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYH----TVVVTDR 449
               S  + RP+ +  L    + QI+ G  H    T V TDR
Sbjct: 665 QGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDR 706



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 129/274 (47%), Gaps = 10/274 (3%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+  G NSS       T   I  P+L +       + + AG   T  ++  G V  CG  
Sbjct: 340 VYVWGSNSSHQLAE-GTLEKILLPKLTQGFSDA--QTIEAGQYCTFSVSTDGSVKACGKG 396

Query: 245 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
           ++G+LG GD+ ++  PK +   P   +  V        + LA+T +G V+S+G G    L
Sbjct: 397 SYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYGKL 456

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           GHG    +  P+ +Q      I VV  SAG  H  A+ + G +YTWG+G  G LGH D  
Sbjct: 457 GHGNSATQKYPKIVQGPLFSKI-VVSASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQ 515

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            +  P  +  + S +    C       V  D  +++ FG    G LG    G +++V RP
Sbjct: 516 SRNTPTLVKDI-SGVGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLG---HGDTNRVYRP 571

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           +++++L    + ++  G   ++ +T  G++F +G
Sbjct: 572 KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG 605



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 156/336 (46%), Gaps = 11/336 (3%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSAS 172
            Q+  G+  + LI SN +V + G    G LG G      V      F       +V    S
Sbjct: 3715 QVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGS 3774

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            + H+  + ++G+VF+ GD      GH +  R   RP+ +EAL+G    Q+  G   +  +
Sbjct: 3775 DGHSMALTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGFRHSAVV 3833

Query: 233  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-V 291
            T  G + T GS   G+LG   T ++  P+ +A LE    V Q++ G ++ L ++ +G+ V
Sbjct: 3834 TADGKLFTFGSGESGRLGQRSTSNKMQPERVAALEGY-HVGQVSCGLNHTLVLSLDGMAV 3892

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            ++FG G    LG G    +  P+ ++    KG+   +V  G +  V L + G+VYT+G+ 
Sbjct: 3893 WAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMK--KVCCGAQFSVVLATDGHVYTFGQE 3950

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
                L      +++ P+ + SL+      +         L  TG +Y +G    G LG  
Sbjct: 3951 RLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGL- 4009

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
              G  + V  P ++ +L+  ++ QIS G  H+   T
Sbjct: 4010 --GHCNLVKEPTLITALQGKNIKQISAGRCHSSAWT 4043



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 11/233 (4%)

Query: 235  RGHVHTCGSNTHGQL-GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            +  V+  G+  +GQL G G  L  PT   +AP   +    Q+  G +    +  NG V +
Sbjct: 3680 KSDVYLWGNGRYGQLAGTGTNLTLPT---LAPC--LSQTQQVVCGQNCSFLIQSNGAVMA 3734

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGY 352
             G G    LG G   D   P  I  F+   +  +  S G D H +AL  +G V++WG G 
Sbjct: 3735 VGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGD 3794

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+   +  P+ + +L+    VQ+    R + V+   G ++ FG    G LG   
Sbjct: 3795 FGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG--Q 3852

Query: 413  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 464
            R  S+K ++P  + +L  +HV Q+S GL HT+V++ D   ++ FGD +  +LG
Sbjct: 3853 RSTSNK-MQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLG 3904



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 21/291 (7%)

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGHV 238
           G V  CG  S    G  D+N      +LV      +K V   + + G   T  +T+ G V
Sbjct: 388 GSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDG--HTLAITVDGEV 445

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHG++  +  PK +        VV  +AG  +  AVT +G +Y++G G 
Sbjct: 446 FSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGD 505

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGKGYCGALG 357
              LGH +      P  ++     G    +V+ G  H +A+   G  ++++G G  G LG
Sbjct: 506 FGRLGHSDSQSRNTPTLVKDISGVG----QVACGSSHTIAVAQDGRTMWSFGGGDNGKLG 561

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW---MGFGSLGFPDRG 414
           HGD      P+ + +L   +  +VCA  + +  L   G V+ +G    +G GS       
Sbjct: 562 HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGS------- 614

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
                LRPR ++ L    +  IS G  H + ++    ++ +G+N   Q G 
Sbjct: 615 SETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQ 665



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 132/330 (40%), Gaps = 51/330 (15%)

Query: 116 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           Q+  G  HT+ ++    +++S G    G LGHG +T +      I       + +V A  
Sbjct: 531 QVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHG-DTNRVYRPKVIEALHGFIIRKVCAGS 589

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  +  +GQVF  G  S   CG  +T     RPR VE L       ++ G +    L+
Sbjct: 590 QSSLALTSAGQVFAWGCGSCLGCGSSETTS--LRPRFVEDLSITKIIDISCGDSHCLALS 647

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
               V+  G+NT GQ G G T    T PK +  LE V S+ QI AG S+ LA T      
Sbjct: 648 HENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGV-SIQQITAGTSHSLAWT------ 700

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY--TWGK 350
                                 A+ T R+       V+      V L+ S + Y   + K
Sbjct: 701 ----------------------AVPTDRQ------LVAWHRPFCVDLEESTFTYLCNFLK 732

Query: 351 GYCGALGHGDEIDKTLPEP-LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            YC  L      D T P P LS    H  + +C +     V +      G G M  GS G
Sbjct: 733 CYCDGLE-----DDTPPTPFLSKRDHHQFILLCMKLLS--VHLSLAHAGGTGAMVLGSQG 785

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            P R +  +++   +  S++   ++ +S G
Sbjct: 786 RPLRNLLFRLIDSNMPGSIQQAVLNTLSIG 815



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 13/190 (6%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G     L P+  Q F         + AG     ++ + G V   GK
Sbjct: 340 VYVWGSNSSHQLAEGTLEKILLPKLTQGFS----DAQTIEAGQYCTFSVSTDGSVKACGK 395

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  ++++P+ L  L+ H  ++     +     T  +   G V+ +G   +G
Sbjct: 396 GSYGRLGLGDSNNQSMPKKLV-LEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEYG 454

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+I+   L +  V   S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 455 KLG---HGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGH 511

Query: 466 DTLRGCLEPT 475
              +    PT
Sbjct: 512 SDSQSRNTPT 521



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 9/148 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L  G   + TLP  L+   S     VC  +  +F++   G+V   G   
Sbjct: 3683 VYLWGNGRYGQLA-GTGTNLTLPT-LAPCLSQTQQVVCG-QNCSFLIQSNGAVMAVGEGQ 3739

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +  P I+ + + + V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3740 YGRLG---QGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFG 3796

Query: 462  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
            +LGH        P +I   + E+   LA
Sbjct: 3797 KLGHGNNERQRRPKQIEALQGEDVVQLA 3824


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 150/323 (46%), Gaps = 20/323 (6%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            V     H+A V ++G+VFT G+ S    GH      I  PRL+E+L       V  G  
Sbjct: 81  HVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSI-HPRLIESLAVCNVDIVACGEF 139

Query: 228 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            T  +T  G ++T G  TH  G LGHG  +    PK IA   E  +V  ++ G  +   +
Sbjct: 140 HTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALI 199

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------ 339
           T  G +++FG G+   LGHG +     P+ +++    G+  + V+ G  H  A+      
Sbjct: 200 TTMGQLFTFGDGTFGVLGHGNRESISCPKEVESL--SGLKTISVACGVWHTAAIVEVIVT 257

Query: 340 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
                 SSG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L  +
Sbjct: 258 QSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTS 317

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G V   G   +G LG P    SD  + P +++ +   +V Q++ G YH  V+T +  +F 
Sbjct: 318 GKVLSMGNTVYGQLGNPR---SDGKI-PCLVEEIVGENVVQVACGSYHVAVLTIKSEVFT 373

Query: 455 FGDNERAQLGHDTLRGCLEPTEI 477
           +G     +LGH  +     PT +
Sbjct: 374 WGKGANGRLGHGDIEDRKIPTLV 396



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKSIA----PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T ++      PLE   V     +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGS 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR I++     + +  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSIHPRLIESLAVCNVDI--VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSH 171

Query: 365 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P+ ++     LAV  V      T ++   G ++ FG   FG LG  +R   + +  P+
Sbjct: 172 WIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNR---ESISCPK 228

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRL 288

Query: 473 EPT 475
           +PT
Sbjct: 289 KPT 291



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 142/339 (41%), Gaps = 21/339 (6%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           ++  L+  N  VF+ G    G LGHG      +    I   +  +V  V+  E H   V 
Sbjct: 87  KHSALVTKNGEVFTWGEESGGRLGHGSREDS-IHPRLIESLAVCNVDIVACGEFHTCAVT 145

Query: 181 QSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
            +G+++T GD +      GH          R+  AL+G+    V+ G   T  +T  G +
Sbjct: 146 TAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQL 205

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-----------G 287
            T G  T G LGHG+      PK +  L  +   + +A G  +  A+             
Sbjct: 206 FTFGDGTFGVLGHGNRESISCPKEVESLSGL-KTISVACGVWHTAAIVEVIVTQSSSSIS 264

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           +G ++++G G    LGHG++   L+P  + +      H  R++ G    V L +SG V +
Sbjct: 265 SGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFH--RIACGHSLTVGLTTSGKVLS 322

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
            G    G LG+    D  +P  +  +     VQV        VL     V+ +G    G 
Sbjct: 323 MGNTVYGQLGN-PRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGR 381

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
           LG  D  + D+ + P ++++LR   V  I+ G   T  +
Sbjct: 382 LGHGD--IEDRKI-PTLVEALRDRSVRHIACGANFTAAI 417



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 121/272 (44%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G +HT  ++ +     +  G+   G+LGHG + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGT 193

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H A +   GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITTMGQLFTFGDGTFGVLGHGN-RESISCPKEVESLSGLKTISVACGVWHTAAIV 252

Query: 234 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
                        G + T G     +LGHGD   R  P  +A L +     +IA G S  
Sbjct: 253 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFHRIACGHSLT 311

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           + +T +G V S G+     LG+  + D   P  ++     G +VV+V+ G  HV  L   
Sbjct: 312 VGLTTSGKVLSMGNTVYGQLGN-PRSDGKIPCLVEEI--VGENVVQVACGSYHVAVLTIK 368

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 369 SEVFTWGKGANGRLGHGDIEDRKIPTLVEALR 400



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 18/274 (6%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           + RP+ +E+   +    V  G+  +  +T  G V T G  + G+LGHG   D   P+ I 
Sbjct: 65  VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIE 124

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  V +V  +A G  +  AVT  G +Y++G G++    LGHG+      P+ I     +
Sbjct: 125 SL-AVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAG-ALE 182

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V  VS G  H   + + G ++T+G G  G LGHG+    + P+ + SL     + V 
Sbjct: 183 GLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVA 242

Query: 383 ARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
                T  +V+            G ++ +G      LG  D+   +  L+P  + SL  +
Sbjct: 243 CGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDK---EPRLKPTCVASLIDY 299

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              +I+ G   TV +T  G++   G+    QLG+
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGN 333



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++ G +HT LI+    +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPK--EVESLSGLKTISVACGVW 246

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A +++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFHRIA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 281
            G + T  LT  G V + G+  +GQLG+     R   K    +EE+   +VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGKVLSMGNTVYGQLGN----PRSDGKIPCLVEEIVGENVVQVACGSYH 361

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
           +  +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 362 VAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSV 404



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 4/186 (2%)

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           S  +GS+  +    + D L+P+ +++     +    V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVVRSTVRTDVLRPKPLES--NLVLDAYHVDCGVKHSALVTKNGEVFTWGEES 105

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHG   D   P  + SL       V   +  T  +   G +Y +G  G  ++G   
Sbjct: 106 GGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWG-DGTHNVGLLG 164

Query: 413 RGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
            G       P RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH      
Sbjct: 165 HGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESI 224

Query: 472 LEPTEI 477
             P E+
Sbjct: 225 SCPKEV 230



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 12/127 (9%)

Query: 340 DSSGYVYTWGKGYC-GALGHGDE--------IDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           DSSG VY WG+  C  ++  G +         D   P+PL S     A  V    + + +
Sbjct: 32  DSSGDVYVWGEVICDNSVRTGSDTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSAL 91

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V+ +G    G LG   R   +  + PR+++SL   +V  ++ G +HT  VT  G
Sbjct: 92  VTKNGEVFTWGEESGGRLGHGSR---EDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAG 148

Query: 451 RLFGFGD 457
            L+ +GD
Sbjct: 149 ELYTWGD 155


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 131/290 (45%), Gaps = 16/290 (5%)

Query: 185 VFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           V+ CG N++    CG R++    +R R     KG     V  G +++  + + G V +CG
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGR-VDGVACGSSYS-VVVVAGQVASCG 91

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
            N HGQLGHG   +   P+ +  L  V  VV +AA  ++ LA+   G VYS+G G    L
Sbjct: 92  KNVHGQLGHGGRDEETAPRVVEGLRGV-RVVAVAARGAHTLALDDRGRVYSWGRGDEGQL 150

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           GHG       PR I    R    VV V AG  H +ALD+ G VY+WG G  GALGHGD  
Sbjct: 151 GHGAFEAVPHPRRIA---RLPTSVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRR 207

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            +  P  +   K+  A  V    R   V+   G++  +GW  +G  G    G     LRP
Sbjct: 208 RQLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGG---DGLRP 264

Query: 423 R--ILDSLRAHHVSQISTGLYHTVVVTDRGR---LFGFGDNERAQLGHDT 467
               L           + G  HT+  T       ++ FG N   Q G  T
Sbjct: 265 AEVPLPGDGGAECVLAACGYRHTLCATRHASGDAIWAFGWNAYGQCGGST 314



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 114/241 (47%), Gaps = 8/241 (3%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
           V+ CG N  GQLG GD   R  P  +       G V  +A G SY + V   G V S G 
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVVA-GQVASCGK 92

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             +  LGHG + +E  PR ++  R  G+ VV V+A   H +ALD  G VY+WG+G  G L
Sbjct: 93  NVHGQLGHGGRDEETAPRVVEGLR--GVRVVAVAARGAHTLALDDRGRVYSWGRGDEGQL 150

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           GHG       P  ++ L + + V V A +  +  L   G+VY +G    G+LG  DR   
Sbjct: 151 GHGAFEAVPHPRRIARLPTSV-VAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDR--- 206

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
            + L PR ++  +    + +S G  H  VVT  G L  +G     Q G       L P E
Sbjct: 207 RRQLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDGLRPAE 266

Query: 477 I 477
           +
Sbjct: 267 V 267



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 137/360 (38%), Gaps = 42/360 (11%)

Query: 117 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 176
           +  G  +++++    V SCG ++ G LGHG    +      +       VV V+A   H 
Sbjct: 72  VACGSSYSVVVVAGQVASCGKNVHGQLGHGGRDEETAPRV-VEGLRGVRVVAVAARGAHT 130

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
             +   G+V++ G       GH      +  PR +  L       V AG   +  L   G
Sbjct: 131 LALDDRGRVYSWGRGDEGQLGH-GAFEAVPHPRRIARLP-TSVVAVGAGRTHSLALDADG 188

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V++ G    G LGHGD   +  P+++    +      ++ G  +   VT +G + ++G 
Sbjct: 189 AVYSWGCGDDGALGHGDRRRQLAPRAVE-FFKTRPAAAVSCGSRHNAVVTADGALVTWGW 247

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV-----ALDSSGYVYTWGK- 350
            +    G     D L+P  +      G   V  + G  H +     A   + + + W   
Sbjct: 248 AAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAACGYRHTLCATRHASGDAIWAFGWNAY 307

Query: 351 GYCGA---------------LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
           G CG                LG  +  D  + E LS+   H    VC  +     L   G
Sbjct: 308 GQCGGSTCSAAAPRRVGGKFLGSQEGGDGAVVEALSAGGRH---SVCCVR-----LPGGG 359

Query: 396 SV-YGFGWMGFGSLGFPDRGVSDKVLRPRI-LDSLRAHHVSQ-----ISTGLYHTVVVTD 448
           +  Y +G    G LG  DR   D+   PR+   + R + V Q     ++ G  HTV V D
Sbjct: 360 TATYAWGRGDDGQLGSGDR--RDRRANPRVAATAARVNSVGQRPLRGLACGWAHTVFVVD 417


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 141/311 (45%), Gaps = 18/311 (5%)

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            + ++    H A V + G+VFT  + +    GH      + RP+LVE L       V  G 
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGH-GIQVDVCRPKLVEFLALTNIDFVACGE 1263

Query: 227  NFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
              T  ++  G + T G   H  G LGHG  L    PK ++   E   V+ +A G  +   
Sbjct: 1264 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSAL 1323

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 339
             T NG +++FG G+   LGHG++     P+ ++     G+  ++V+ G  H VA+     
Sbjct: 1324 ATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKML--SGLKTLKVACGVWHTVAIVEVMN 1381

Query: 340  -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
                  SS  ++TWG G    LGHG++    LP  +SSL  +   Q+      T  L  +
Sbjct: 1382 QTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTS 1441

Query: 395  GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
            G V+  G    G LG  +   SD  L   + D L    V +IS G +H  V+T R  +F 
Sbjct: 1442 GHVFTMGGTSHGQLGSSN---SDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFT 1498

Query: 455  FGDNERAQLGH 465
            +G     +LGH
Sbjct: 1499 WGKGSNGRLGH 1509



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
            +  G YHT  +S S  +F+ G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 1259 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIP-KRVSGPVEGLQVLSVACG 1317

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 225
              H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G       
Sbjct: 1318 TWHSALATANGKLFTFGDGAFGVLGHGD-RESVSYPKEVKMLSGLKTLKVACGVWHTVAI 1376

Query: 226  ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
               +N TG  T    + T G     +LGHG+      P  ++ L +  +  QIA G ++ 
Sbjct: 1377 VEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFNQIACGHTFT 1435

Query: 283  LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            +A+T +G V++ G  S+  LG      +L P  +Q  R  G  V  +S GD HV  L S 
Sbjct: 1436 VALTTSGHVFTMGGTSHGQLGSSNSDGKL-PCLVQD-RLVGEFVEEISCGDHHVAVLTSR 1493

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
              V+TWGKG  G LGHGD+ D+  P  + +L+
Sbjct: 1494 SEVFTWGKGSNGRLGHGDKDDRKTPTLVEALR 1525



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 155/374 (41%), Gaps = 37/374 (9%)

Query: 103  SSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVS 154
            S D V  S   ++ I  G  H  L++    VF+      G LGHG       P+  + ++
Sbjct: 1193 SPDGVVNSTTVKIDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLA 1252

Query: 155  FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVE 212
             T I+F        V+  E H   V  SG +FT GD  ++    GH          R+  
Sbjct: 1253 LTNIDF--------VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSG 1304

Query: 213  ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
             ++G+    V  G   +   T  G + T G    G LGHGD      PK +  L  + + 
Sbjct: 1305 PVEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKT- 1363

Query: 273  VQIAAGPSYMLAV----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
            +++A G  + +A+          T +  ++++G G    LGHG +   L P  + +    
Sbjct: 1364 LKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY 1423

Query: 323  GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQV 381
              +  +++ G    VAL +SG+V+T G    G LG  +  D  LP  +   L      ++
Sbjct: 1424 NFN--QIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLPCLVQDRLVGEFVEEI 1480

Query: 382  CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
                    VL     V+ +G    G LG  D+   D    P ++++LR  HV  IS G  
Sbjct: 1481 SCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDK---DDRKTPTLVEALRERHVKSISCGAD 1537

Query: 442  HTVVVTDRGRLFGF 455
             +V    R + FGF
Sbjct: 1538 QSVCSGCR-QAFGF 1550



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 27/293 (9%)

Query: 115  MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
            + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   S    ++V+  
Sbjct: 1312 LSVACGTWHSALATANGKLFTFGDGAFGVLGHGDR--ESVSYPKEVKMLSGLKTLKVACG 1369

Query: 173  ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
              H   +++          S ++FT GD      GH +    +  P  V +L      Q+
Sbjct: 1370 VWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFNQI 1428

Query: 223  TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 281
              G  FT  LT  GHV T G  +HGQLG  ++ D   P  +     VG  V+ I+ G  +
Sbjct: 1429 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS-DGKLP-CLVQDRLVGEFVEEISCGDHH 1486

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALD 340
            +  +T    V+++G GSN  LGHG++ D   P  ++  R +  HV  +S G D+ V +  
Sbjct: 1487 VAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRER--HVKSISCGADQSVCSGC 1544

Query: 341  SSGYVYTWGKGYCGALG----HGDEIDKTLPEPLSSL--KSHLAVQVCARKRK 387
               + +T  +  C   G    H     K L   L+    K H     C  K K
Sbjct: 1545 RQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLK 1597



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 18/216 (8%)

Query: 273  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            + IA G  ++  VT  G V+++   +   LGHG Q D  +P+ ++      I  V  + G
Sbjct: 1205 IDIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFV--ACG 1262

Query: 333  DEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTF 389
            + H  A+ +SG ++TWG G    G LGHG ++   +P+ +S     L V  V      + 
Sbjct: 1263 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSA 1322

Query: 390  VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV--- 446
            +    G ++ FG   FG LG  DR   + V  P+ +  L      +++ G++HTV +   
Sbjct: 1323 LATANGKLFTFGDGAFGVLGHGDR---ESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEV 1379

Query: 447  -------TDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
                   T   +LF +GD ++ +LGH      L PT
Sbjct: 1380 MNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPT 1415



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 25/188 (13%)

Query: 98   QSVEHSSDIVETSAGNQMQITTGRYHTLLI-----------SNSSVFSCGSSLCGVLGHG 146
            +SV +  ++   S    +++  G +HT+ I           S+  +F+ G      LGHG
Sbjct: 1347 ESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHG 1406

Query: 147  PETT----QCVS-FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 201
             + T     CVS     NF       Q++        +  SG VFT G  S    G  ++
Sbjct: 1407 NKETYLLPTCVSSLIDYNFN------QIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNS 1460

Query: 202  NRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
            +  +  P LV+  L G   ++++ G +    LT R  V T G  ++G+LGHGD  DR TP
Sbjct: 1461 DGKL--PCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTP 1518

Query: 261  KSIAPLEE 268
              +  L E
Sbjct: 1519 TLVEALRE 1526


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 8/257 (3%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           ++AG + T  L     V + G    GQLGHGDT DR  P  ++  +    +V +  G  Y
Sbjct: 17  ISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ-DIVSVTCGADY 75

Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            +A + +G  VYS+G G    LGHG+  D   P  I+    +G+ + ++S GD H +A+ 
Sbjct: 76  TVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRAL--QGLRIKQISCGDCHCLAVT 133

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
               V +WG+   G LG G   D  +P+ + + +      V A    +  + + G +YG+
Sbjct: 134 MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGW 193

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           GW  +G+LG  D   +D+++  ++  ++    +  +S G  HT+ ++  G L+  G ++ 
Sbjct: 194 GWGRYGNLGLGD--TNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKY 249

Query: 461 AQLGHDTLRGCLEPTEI 477
            QLGH     CL P ++
Sbjct: 250 GQLGHGDFEDCLVPRKV 266



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 131/276 (47%), Gaps = 9/276 (3%)

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
           S  HV+ +SA  +H   +L    V + G       GH DT+  +  P  + A  G     
Sbjct: 10  SPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLL-PTKLSAFDGQDIVS 68

Query: 222 VTAGLNFTGFLTIRGH-VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           VT G ++T   +  G  V++ G    G+LGHGD  D   P  I  L+ +  + QI+ G  
Sbjct: 69  VTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGL-RIKQISCGDC 127

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + LAVT    V S+G   N  LG G   D   P+ I  F  +GI +  V+AG EH VA+ 
Sbjct: 128 HCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAF--EGIRIKMVAAGAEHSVAIT 185

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G +Y WG G  G LG GD  D+ +PE + ++     V V    R T  +  +G +Y  
Sbjct: 186 EDGDLYGWGWGRYGNLGLGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTH 244

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
           GW  +G LG  D    +  L PR + +L    +SQ+
Sbjct: 245 GWSKYGQLGHGD---FEDCLVPRKVQALSDKLISQV 277



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 136/269 (50%), Gaps = 8/269 (2%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I+ G  HT+ L++ + V S G    G LGHG +T   +  T+++      +V V+   
Sbjct: 15  LLISAGASHTVALLTGNVVCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGA 73

Query: 174 NHAAFVLQSGQ-VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           ++     +SG+ V++ G       GH D +  +F P  + AL+G+  KQ++ G      +
Sbjct: 74  DYTVARSKSGKDVYSWGWGDFGRLGHGDPS-DLFIPHPIRALQGLRIKQISCGDCHCLAV 132

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T+   V + G N +G+LG G T D   P+ I   E +  +  +AAG  + +A+T +G +Y
Sbjct: 133 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLY 191

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G G    LG G+ +D L P  +      G  +V VS G  H +++ SSG +YT G   
Sbjct: 192 GWGWGRYGNLGLGDTNDRLIPEKVNI---DGDKIVMVSCGWRHTISISSSGGLYTHGWSK 248

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
            G LGHGD  D  +P  + +L   L  QV
Sbjct: 249 YGQLGHGDFEDCLVPRKVQALSDKLISQV 277



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 76/158 (48%), Gaps = 4/158 (2%)

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
           HV+ +SAG  H VAL +   V +WG+G  G LGHGD  D+ LP  LS+      V V   
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCG 72

Query: 385 KRKTFVLVDTG-SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
              T     +G  VY +GW  FG LG  D      +  P  + +L+   + QIS G  H 
Sbjct: 73  ADYTVARSKSGKDVYSWGWGDFGRLGHGD---PSDLFIPHPIRALQGLRIKQISCGDCHC 129

Query: 444 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           + VT   ++  +G N+  +LG  T +    P +I   E
Sbjct: 130 LAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFE 167


>gi|443698344|gb|ELT98382.1| hypothetical protein CAPTEDRAFT_123860, partial [Capitella teleta]
          Length = 409

 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 134/277 (48%), Gaps = 23/277 (8%)

Query: 208 PRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHVHTCG-----SNTHGQLGHGDTLDRPTPK 261
           P+ +E   KG    QV+AG      +T+   ++T       ++  GQLGHGDT     PK
Sbjct: 11  PQQLEVFTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYKAPK 70

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD----ELQPRAIQ 317
            +  L+++ +V Q++ G  + + VT +G VYSFGS    CLG+G+Q D       P  + 
Sbjct: 71  RVEALDKI-AVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVS 129

Query: 318 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 377
            F  +   V++VS GD HV+AL   G VYTWG G  G LG G E D + P+ +++   H 
Sbjct: 130 FFVNR--PVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHG 187

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDS 427
              V A    +F+L   G +   G      LG     +G+  K +   I        +  
Sbjct: 188 IRSVHAGPDGSFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKP 247

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           L  +++  +S G  H+ V+   G L  FG N+  QLG
Sbjct: 248 LSKYNIVAVSPGQTHSAVIDGFGHLITFGSNKYGQLG 284



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 143/326 (43%), Gaps = 26/326 (7%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCC-----GHRDTNRPIFRPRLVEAL 214
           F      +QVSA   H A V    +++T  +           GH DT      P+ VEAL
Sbjct: 17  FTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDT-ASYKAPKRVEAL 75

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR---PTPKSIAPLEEVGS 271
             +   QV+ G +FT  +T  G V++ GS+ +G LG+GD  D        S+        
Sbjct: 76  DKIAVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSPSLVSFFVNRP 135

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V+Q++ G ++++A+T  G VY++GSG    LG G + D   P+ + T  R GI  V   A
Sbjct: 136 VLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSSPQKVATRGRHGIRSVH--A 193

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALG--------HGDEIDKTLP-----EPLSSLKSHLA 378
           G +    L ++G + + G      LG           ++   +P       +  L  +  
Sbjct: 194 GPDGSFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKPLSKYNI 253

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
           V V   +  + V+   G +  FG   +G LG  D    ++     +  SL   +V++++ 
Sbjct: 254 VAVSPGQTHSAVIDGFGHLITFGSNKYGQLGVGD--FKERKTVTMVTGSLVGKNVTKVAC 311

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLG 464
           G   TV+ T    ++  G +E  +LG
Sbjct: 312 GDRSTVIATSDNLIYSCGFSENGRLG 337



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 14/230 (6%)

Query: 257 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-----LGHGEQHDEL 311
           + TP+ +    +  S +Q++AG ++   VT    +Y++ +          LGHG+     
Sbjct: 8   KLTPQQLEVFTKGHSALQVSAGHAHFAVVTVERELYTWANAQGLTSMAGQLGHGDTASYK 67

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID----KTLP 367
            P+ ++   +  I V +VS G++  V +   G VY++G  Y G LG+GD+ D       P
Sbjct: 68  APKRVEALDK--IAVNQVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCACSP 125

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
             +S   +   +QV         L   G VY +G   FG LG    G  D    P+ + +
Sbjct: 126 SLVSFFVNRPVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLGI---GTEDDHSSPQKVAT 182

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
              H +  +  G   + ++   GRL   G NE  +LG ++    L   ++
Sbjct: 183 RGRHGIRSVHAGPDGSFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQV 232



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 19/180 (10%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VYS+G G            +L P+ ++ F  KG   ++VSAG  H   +     +YTW  
Sbjct: 1   VYSWGGG------------KLTPQQLEVFT-KGHSALQVSAGHAHFAVVTVERELYTWAN 47

Query: 351 G-----YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
                   G LGHGD      P+ + +L      QV   +  T  + D G+VY FG   +
Sbjct: 48  AQGLTSMAGQLGHGDTASYKAPKRVEALDKIAVNQVSCGEDFTVCVTDDGAVYSFGSDYY 107

Query: 406 GSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           G LG  D+G   D    P ++       V Q+S G  H + +T  G ++ +G  E  +LG
Sbjct: 108 GCLGNGDQGDGEDCACSPSLVSFFVNRPVLQVSCGDAHVIALTKEGEVYTWGSGEFGRLG 167



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 26/262 (9%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ +++  +V+S GS   G LG+G     E   C S + ++F     V+QVS
Sbjct: 82  QVSCGEDFTVCVTDDGAVYSFGSDYYGCLGNGDQGDGEDCAC-SPSLVSFFVNRPVLQVS 140

Query: 171 ASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
             + H   + + G+V+T G         G  D +     P+ V        + V AG + 
Sbjct: 141 CGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHSS---PQKVATRGRHGIRSVHAGPDG 197

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGD----------TLDRPTP---KSIAPLEEVGSVVQI 275
           +  L   G + +CGSN H +LG             + D P      ++ PL +  ++V +
Sbjct: 198 SFILRTNGRLQSCGSNEHNKLGLNSCAKGLRSKQVSYDIPCNYNFTTVKPLSKY-NIVAV 256

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
           + G ++   + G G + +FGS     LG G+   E +   + T    G +V +V+ GD  
Sbjct: 257 SPGQTHSAVIDGFGHLITFGSNKYGQLGVGD-FKERKTVTMVTGSLVGKNVTKVACGDRS 315

Query: 336 VVALDSSGYVYTWGKGYCGALG 357
            V   S   +Y+ G    G LG
Sbjct: 316 TVIATSDNLIYSCGFSENGRLG 337



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 20/205 (9%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q++ G  H + L     V++ GS   G LG G E     S  ++       +  V A  
Sbjct: 137 LQVSCGDAHVIALTKEGEVYTWGSGEFGRLGIGTEDDHS-SPQKVATRGRHGIRSVHAGP 195

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK------------- 220
           + +  +  +G++ +CG N     G     + +   R  +    +PC              
Sbjct: 196 DGSFILRTNGRLQSCGSNEHNKLGLNSCAKGL---RSKQVSYDIPCNYNFTTVKPLSKYN 252

Query: 221 --QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
              V+ G   +  +   GH+ T GSN +GQLG GD  +R T   +       +V ++A G
Sbjct: 253 IVAVSPGQTHSAVIDGFGHLITFGSNKYGQLGVGDFKERKTVTMVTGSLVGKNVTKVACG 312

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLG 303
               +  T + ++YS G   N  LG
Sbjct: 313 DRSTVIATSDNLIYSCGFSENGRLG 337


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 166/386 (43%), Gaps = 28/386 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 174
           G YH    +   VF  G S+   +  G   +   +      P A     V  ++N     
Sbjct: 250 GSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGK 309

Query: 175 -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            HA  V + G++F+ G+                +P+ + +++G+  K +  G   T  +T
Sbjct: 310 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAIT 368

Query: 234 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 369 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQL 428

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 339
           ++FG G+   LGHG++     PR +++    G+ V +V+ G  H  A+            
Sbjct: 429 FTFGDGTFGALGHGDRRSTSVPREVESL--IGLIVTKVACGVWHTAAVVEVTNEASEAEV 486

Query: 340 DSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           DSS G V+TWG G  G LGHGD   K LPE + SL +    QV      T      G VY
Sbjct: 487 DSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVY 546

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             G   +G LG P    +      R+   +    V +I+ G YH  V+T +  ++ +G  
Sbjct: 547 TMGSTAYGQLGNP---TAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKG 603

Query: 459 ERAQLGHDTLRGCLEPTEI-FIQEME 483
              QLGH  +    EP  + F++E +
Sbjct: 604 LNGQLGHGNVENKREPAVVGFLREKQ 629



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 153/395 (38%), Gaps = 57/395 (14%)

Query: 26  RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAG------------ 73
           R S  D   L L+S     SHG Y + F +L D+          + +G            
Sbjct: 229 RFSTNDPFRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTTEDA 288

Query: 74  -----MSRNVQIELLNRCNGNWKRVLRFLQ---------SVEHSSDIVETSAGNQMQITT 119
                +   + ++  N   G    VL   Q                 +ET A     I++
Sbjct: 289 LLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISS 348

Query: 120 GR-----------YHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFPSAAH 165
            R           +HT  I+ S  ++S G     V  LGHG E++  +           +
Sbjct: 349 VRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLY 408

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V+    H A V  SGQ+FT GD +    GH D  R    PR VE+L G+   +V  G
Sbjct: 409 VSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGD-RRSTSVPREVESLIGLIVTKVACG 467

Query: 226 LNFTGFL-------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           +  T  +             + RG V T G    GQLGHGD   +  P+ +  L    ++
Sbjct: 468 VWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTN-ENI 526

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            Q+A G S  ++ T  G VY+ GS +   LG+         R         +    ++ G
Sbjct: 527 CQVACGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVE--EIACG 584

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             HV  L S   +YTWGKG  G LGHG+  +K  P
Sbjct: 585 SYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREP 619



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 25/229 (10%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS----------FTRI--NFPSA 163
           +  G +HT ++++S  +F+ G    G LGHG   +  V            T++       
Sbjct: 412 VACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHT 471

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A VV+V+   + A      GQVFT GD      GH D +  +  P  V +L      QV 
Sbjct: 472 AAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLL-PECVISLTNENICQVA 530

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAG 278
            G + T   T RGHV+T GS  +GQLG+      PT K   P    G +V+     IA G
Sbjct: 531 CGHSLTVSRTSRGHVYTMGSTAYGQLGN------PTAKGNFPERVEGDIVEASVEEIACG 584

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             ++  +T    +Y++G G N  LGHG   ++ +P  +   R K +  +
Sbjct: 585 SYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAI 633


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 144/316 (45%), Gaps = 29/316 (9%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
           VFT G  +    GH    +   R       PR++E  +G    ++  G   +  +   G 
Sbjct: 7   VFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEGK 66

Query: 238 VHTCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           ++T GSN + QLGHG +    +  P+ +  L  +  +V I+ G  +  AV   G ++++G
Sbjct: 67  LYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGI-KIVDISCGEYHTGAVDEEGKLFTWG 125

Query: 296 SGSNF-----CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            G +       LGH    DE  PR ++T   +G+ V  V  G+ H VAL   G ++ WG 
Sbjct: 126 WGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGN 185

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G  G LG+G   +  +PEP+          + A +  TF + + G VY +G      LG 
Sbjct: 186 GEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHSQLGL 245

Query: 411 PDRGVSDKV---LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
                 D       P ++++L   +V+Q+S G  H   VT+ G++F +G    A+L    
Sbjct: 246 GGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG----AKL---- 297

Query: 468 LRGCLEPTEIFIQEME 483
               LEP E+ I + E
Sbjct: 298 ---WLEPHEMTILKDE 310



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 21/249 (8%)

Query: 232 LTIRGHVHTCGSNTHGQLGHG---DTLDRPTPKSIAP--LE--EVGSVVQIAAGPSYMLA 284
           ++ +  V T G+ T GQLGHG    T  R + + ++P  LE  E  ++ ++  G ++  A
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +   G +Y++GS     LGHG  + ++Q  PR +   R  GI +V +S G+ H  A+D  
Sbjct: 61  IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALR--GIKIVDISCGEYHTGAVDEE 118

Query: 343 GYVYTWGKG-----YCGALGHGDEIDKTLPEPLSSLKSH-LAVQ-VCARKRKTFVLVDTG 395
           G ++TWG G       GALGH    D+++P  + +L    + V+ V   +  T  L   G
Sbjct: 119 GKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDG 178

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            ++ +G   +G LG    G SD    P  ++     +++ IS G   T  +T+ G ++ +
Sbjct: 179 EIWAWGNGEYGRLG---NGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSW 235

Query: 456 GDNERAQLG 464
           G N  +QLG
Sbjct: 236 GINSHSQLG 244



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 139/340 (40%), Gaps = 65/340 (19%)

Query: 101 EHSSDIVETSAG-NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI 158
           E S  I+ET  G N  ++  G  H+  I     +++ GS+    LGHG       S  R+
Sbjct: 34  ELSPRILETFEGKNIAKLDFGATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRV 93

Query: 159 -NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF-----CCGHRDTNRPIFRPRLVE 212
            +      +V +S  E H   V + G++FT G   S        GH         PRLV 
Sbjct: 94  VDALRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESI-PRLVR 152

Query: 213 AL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEE 268
            L  +GVP K V  G   T  LT  G +   G+  +G+LG+G  D  + P P      E 
Sbjct: 153 TLVDQGVPVKSVECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADEN 212

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFG--SGSNFCLGHGEQHD----ELQPRAIQTFRRK 322
           + S   I+AG  +  A+T +G VYS+G  S S   LG G   D    E  P  ++     
Sbjct: 213 IAS---ISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSN- 268

Query: 323 GIHVVRVSAGDEHVVA-----------------------------------------LDS 341
            ++V +VSAG +H  A                                         L +
Sbjct: 269 -VNVAQVSAGYDHAAAVTNDGKMFMWGAKLWLEPHEMTILKDETIISVQCGRYYTAALSA 327

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           SG ++T+GKG+   LGHG+   +  P  + SL  +  V +
Sbjct: 328 SGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSM 367



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 21/229 (9%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT+ L  +  +++ G+   G LG+G      V    + + +  ++  +SA  + 
Sbjct: 164 VECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVP-EPVEYFADENIASISAGRDF 222

Query: 176 AAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
              + + G+V++ G NS    G       D       P +VEAL  V   QV+AG +   
Sbjct: 223 TFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAA 282

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            +T  G +   G+    +           P  +  L++  +++ +  G  Y  A++ +G 
Sbjct: 283 AVTNDGKMFMWGAKLWLE-----------PHEMTILKDE-TIISVQCGRYYTAALSASGN 330

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           +++FG G + CLGHGE+  +LQP  +++  R   +VV ++ G  H+ AL
Sbjct: 331 LFTFGKGHSNCLGHGERKTQLQPLLVESLNR--YNVVSMTCGYSHMGAL 377


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 164/356 (46%), Gaps = 29/356 (8%)

Query: 132 VFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAH-----VVQVSASENHAAFVLQS 182
           VF C     G LG  P++     Q +   R+ + +        V  +++ E H  F+   
Sbjct: 8   VFGCAGD--GQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSDD 65

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           G+V++CG N +   G        +    V     V   Q++AG + +  ++  G +   G
Sbjct: 66  GKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFAWG 125

Query: 243 SNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           SN+HGQL   GD L   TPK +  L E    VQ+A G S+ +++ G G V+ +G  S+  
Sbjct: 126 SNSHGQLAMSGDILASDTPKRVPSLPE---TVQVACGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           + H        P  ++ F    I +V++SAG+   +AL +SG ++ WGK   G LG    
Sbjct: 183 IRHS-------PAEVEIF--ISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTN 233

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
            D   P  + ++ S +AV+ C     +  L   G V+  G   FG LG      S   +R
Sbjct: 234 KDVVNPCAVPNINSVVAVE-CGDSH-SIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMR 291

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
              +  +   HV++I+ G  HT+VV + G++  FG N   QLGH   R  + P  I
Sbjct: 292 G--ITEMLGSHVTRIACGRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRVI 344



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 131/312 (41%), Gaps = 59/312 (18%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I +G  HTL +S+   V+SCGS+  G LG G       +   ++  S   ++Q+SA  +H
Sbjct: 52  IASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSH 111

Query: 176 AAFVLQSGQVFTCGDNS------------------------------------------- 192
           +  V   G++F  G NS                                           
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 193 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 252
            F  G +   R    P  VE    +P  Q++AG  FT  LT  G +   G N  GQLG  
Sbjct: 172 VFIWGQQSDGRIRHSPAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDF 231

Query: 253 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 312
              D   P ++     + SVV +  G S+ +A+T  G V+S GS S   LG G      Q
Sbjct: 232 TNKDVVNPCAVP---NINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCG------Q 282

Query: 313 PRAIQTFRR-----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           P   Q   R      G HV R++ G  H + + ++G ++T+G    G LGHG+  ++  P
Sbjct: 283 PNRSQNCMRGITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITP 341

Query: 368 EPLSSLKSHLAV 379
             + S+++  +V
Sbjct: 342 RVIDSVENVASV 353



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 109/256 (42%), Gaps = 29/256 (11%)

Query: 235 RGHVHTCGSNTHGQLG------HGDTLDRPTPKSI--APLEEVGSVVQ-IAAGPSYMLAV 285
           R  ++  G    GQLG        D      P+ +  AP  + G +V+ IA+G  + L +
Sbjct: 3   RRQLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFL 62

Query: 286 TGNGVVYSFGSGSNFCLGHG---EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           + +G V+S GS  N  LG G   E    + P  I +     + ++++SAG  H +A+   
Sbjct: 63  SDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISS----TVSIIQISAGRSHSMAVSDD 118

Query: 343 GYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G ++ WG    G L   GD +    P+ + SL     VQV      T  L   G V+ +G
Sbjct: 119 GRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPE--TVQVACGASHTVSLNGGGRVFIWG 176

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
               G +      V   +  P          + QIS G   T+ +T  G LF +G NE  
Sbjct: 177 QQSDGRIRHSPAEVEIFISIP----------IVQISAGNLFTMALTASGTLFAWGKNEEG 226

Query: 462 QLGHDTLRGCLEPTEI 477
           QLG  T +  + P  +
Sbjct: 227 QLGDFTNKDVVNPCAV 242



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 5/159 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI+ G   T+ L ++ ++F+ G +  G LG   + T          P+   VV V   +
Sbjct: 199 VQISAGNLFTMALTASGTLFAWGKNEEGQLG---DFTNKDVVNPCAVPNINSVVAVECGD 255

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +H+  +   G+VF+CG +S    G    NR     R +  + G    ++  G   T  + 
Sbjct: 256 SHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHT-IVV 314

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
             G +HT G N++GQLGHG+T ++ TP+ I  +E V SV
Sbjct: 315 ANGKMHTFGLNSNGQLGHGNTRNQITPRVIDSVENVASV 353


>gi|145528624|ref|XP_001450106.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417706|emb|CAK82709.1| unnamed protein product [Paramecium tetraurelia]
          Length = 387

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 156/336 (46%), Gaps = 29/336 (8%)

Query: 146 GPETTQCVSFTR--------INFPSA---AHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G E+T C++  R        I  P       + Q++AS+ H  F     QVF CG N   
Sbjct: 28  GAESTFCITIQRKVFMWGSGIQIPQQLDLQEIEQIAASKEHW-FAWSETQVFGCGSNKQG 86

Query: 195 CCGHRDT-NRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTI---RGHVHTCGSNTHGQL 249
             G  ++ N P       EA + G   +++  GL+ +  L        +   GSNT+ QL
Sbjct: 87  KLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWGSNTYQQL 146

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G   +            + +  +V I A  +Y +A+   G ++S+GS     LG      
Sbjct: 147 GFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRIFSWGSNEFGRLGQNAFAK 206

Query: 310 ELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
            ++ P  I +     I   +++ G  HV+A+D+ G +Y+WG+G  G LGHG+  D   P 
Sbjct: 207 CMKLPSPITSLGNAKI--AKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGNSNDCNKPT 264

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            +SSL++    +V   +  +  L + GSVY FG   FG LG  D    D    P++L   
Sbjct: 265 QISSLQA--IREVTCGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDT---PQMLQI- 318

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              H   I+ G +H+ V+T  G LF FG+NE++QLG
Sbjct: 319 ---HGEMIACGRHHSGVLTKNGALFMFGNNEQSQLG 351



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 132/294 (44%), Gaps = 19/294 (6%)

Query: 116 QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASE 173
           QI   + H    S + VF CGS+  G LG          F   +  S     + +++   
Sbjct: 61  QIAASKEHWFAWSETQVFGCGSNKQGKLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGL 120

Query: 174 NHAAFVL---QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           +H+  ++   +  ++F  G N+    G   + + +  P  +++        + A  N+T 
Sbjct: 121 DHSVALIEVEEENKIFVWGSNTYQQLGFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTM 180

Query: 231 FLTIRGHVHTCGSNTHGQLGH---GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +   G + + GSN  G+LG       +  P+P  I  L     + ++A G  ++LA+  
Sbjct: 181 AIDEEGRIFSWGSNEFGRLGQNAFAKCMKLPSP--ITSLGNA-KIAKLALGTFHVLAIDT 237

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            G +YS+G G    LGHG  +D  +P  I + +     +  V+ G+ H +AL ++G VY 
Sbjct: 238 QGNLYSWGRGLQGQLGHGNSNDCNKPTQISSLQA----IREVTCGEAHSMALQNNGSVYV 293

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +G G  G LG GD   +  P+    L+ H  +  C R   + VL   G+++ FG
Sbjct: 294 FGSGQFGQLGLGDYKQQDTPQ---MLQIHGEMIACGR-HHSGVLTKNGALFMFG 343



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 12/217 (5%)

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR---RKGI 324
           ++  + QIAA   +  A +   V   FG GSN     G  +    P     F    + G 
Sbjct: 55  DLQEIEQIAASKEHWFAWSETQV---FGCGSNKQGKLGMNNSVNTPTLFDIFSEASQYGW 111

Query: 325 HVVRVSAGDEHVVAL---DSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQ 380
            + +++ G +H VAL   +    ++ WG      LG    E    +P  L S      V 
Sbjct: 112 QLQKIAVGLDHSVALIEVEEENKIFVWGSNTYQQLGFDASEQFVAIPHQLDSDNLPRIVD 171

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
           + A+   T  + + G ++ +G   FG LG      +  +  P  + SL    +++++ G 
Sbjct: 172 IYAQHNYTMAIDEEGRIFSWGSNEFGRLG--QNAFAKCMKLPSPITSLGNAKIAKLALGT 229

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +H + +  +G L+ +G   + QLGH     C +PT+I
Sbjct: 230 FHVLAIDTQGNLYSWGRGLQGQLGHGNSNDCNKPTQI 266


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 163/353 (46%), Gaps = 12/353 (3%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G++  G LG G E          +  S   + +V     H+ F++  G V+TCG NS   
Sbjct: 5   GNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNS--- 61

Query: 196 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT- 254
           CG    ++    P +V AL       V+ G   +  +  +G +   G+   GQLG G T 
Sbjct: 62  CGQLGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTE 121

Query: 255 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQP 313
                P+ +  L +   + Q+  G  + +A++ +G ++++G  ++  LG G+ +  +L P
Sbjct: 122 TTVRIPRLVKRLCD-HRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFP 180

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
             +++    GI + +++AG +H  AL  SG V+ WGK   G LG  D+ D+ +P  +  L
Sbjct: 181 HPLKSL--AGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFL 238

Query: 374 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
           +S   V +      T  L   G ++ FG   +G LG    G ++  L PR +  L    V
Sbjct: 239 RSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLG---HGSTNSELLPRRVLELMGTEV 295

Query: 434 SQISTGLYHTVV-VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 485
           SQI+ G +HT+  V   G ++ FG N   QLG   L     P  +      ED
Sbjct: 296 SQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDARSPFPVKTSVPSED 348



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 132/298 (44%), Gaps = 20/298 (6%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGH-----GPETTQCVSFTRINFPSAAHVVQVSASEN 174
           G++   L+ + SV++CGS+ CG LGH      PE    +   +I          VS    
Sbjct: 42  GQHSVFLMHDGSVYTCGSNSCGQLGHDKAGISPEVVGALDTQKITM--------VSCGRG 93

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  V + GQ+F  G       G   T   +  PRLV+ L      QV  G      L+ 
Sbjct: 94  HSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSR 153

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVY 292
            G + T G NT GQLG G     P+     PL+ +  +   QI AG  +  A++ +G V+
Sbjct: 154 DGQLFTWGQNTSGQLGLGK--GEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVF 211

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G      LG  ++ D   P  I+  R +   VV +S GDEH  AL   G ++T+G G 
Sbjct: 212 GWGKNRAGQLGLNDKQDRAVPCHIKFLRSQ--KVVYISCGDEHTAALTKDGGLFTFGDGS 269

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            G LGHG    + LP  +  L      Q+ C R      +  +G VY FG    G LG
Sbjct: 270 WGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLG 327


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 18  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 77

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 325
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 78  STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 134

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 384
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 135 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 194

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 195 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 254

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRG 470
           V+T+ G++F FG +   QL H    G
Sbjct: 255 VLTEDGQVFTFGGSSSEQLQHSPRSG 280



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 172
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 31  LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 88

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 89  KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 148

Query: 233 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 149 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 207

Query: 292 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 208 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 265

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 266 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 318



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 14/306 (4%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 21  RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 79

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 275
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 80  VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 138

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 334
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 139 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 196

Query: 335 HVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           H  AL   G  + WG    G L   G+  +     P  + +LK+   V +      T VL
Sbjct: 197 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 256

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 450
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 257 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 312

Query: 451 RLFGFG 456
           ++   G
Sbjct: 313 QVVSLG 318



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 136 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 195

Query: 174 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 196 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 255

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 273
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 256 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 315

Query: 274 QIAAGPS 280
            +  GPS
Sbjct: 316 SLGRGPS 322


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 166/386 (43%), Gaps = 28/386 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN----- 174
           G YH    +   VF  G S+   +  G   +   +      P A     V  ++N     
Sbjct: 237 GSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGK 296

Query: 175 -HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            HA  V + G++F+ G+                +P+ + +++G+  K +  G   T  +T
Sbjct: 297 CHAVLVTKQGEIFSWGEGKGGK-LGHGLETDAQKPKFISSVRGLGFKSLACGDFHTCAIT 355

Query: 234 IRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
             G +++ G  TH    LGHG+      PK +    +   V  +A GP +   V  +G +
Sbjct: 356 QSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQL 415

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL------------ 339
           ++FG G+   LGHG++     PR +++    G+ V +V+ G  H  A+            
Sbjct: 416 FTFGDGTFGALGHGDRRSTSVPREVESL--IGLIVTKVACGVWHTAAVVEVTNEASEAEV 473

Query: 340 DSS-GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           DSS G V+TWG G  G LGHGD   K LPE + SL +    QV      T      G VY
Sbjct: 474 DSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVY 533

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
             G   +G LG P    +      R+   +    V +I+ G YH  V+T +  ++ +G  
Sbjct: 534 TMGSTAYGQLGNP---TAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKG 590

Query: 459 ERAQLGHDTLRGCLEPTEI-FIQEME 483
              QLGH  +    EP  + F++E +
Sbjct: 591 LNGQLGHGNVENKREPAVVGFLREKQ 616



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 153/395 (38%), Gaps = 57/395 (14%)

Query: 26  RLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAG------------ 73
           R S  D   L L+S     SHG Y + F +L D+          + +G            
Sbjct: 216 RFSTNDPFRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTTEDA 275

Query: 74  -----MSRNVQIELLNRCNGNWKRVLRFLQ---------SVEHSSDIVETSAGNQMQITT 119
                +   + ++  N   G    VL   Q                 +ET A     I++
Sbjct: 276 LLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISS 335

Query: 120 GR-----------YHTLLISNS-SVFSCGSSLCGV--LGHGPETTQCVSFTRINFPSAAH 165
            R           +HT  I+ S  ++S G     V  LGHG E++  +           +
Sbjct: 336 VRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLY 395

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V+    H A V  SGQ+FT GD +    GH D  R    PR VE+L G+   +V  G
Sbjct: 396 VSDVACGPWHTAVVASSGQLFTFGDGTFGALGHGD-RRSTSVPREVESLIGLIVTKVACG 454

Query: 226 LNFTGFL-------------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           +  T  +             + RG V T G    GQLGHGD   +  P+ +  L    ++
Sbjct: 455 VWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTN-ENI 513

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            Q+A G S  ++ T  G VY+ GS +   LG+         R         +    ++ G
Sbjct: 514 CQVACGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVE--EIACG 571

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             HV  L S   +YTWGKG  G LGHG+  +K  P
Sbjct: 572 SYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREP 606



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 25/229 (10%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVS----------FTRI--NFPSA 163
           +  G +HT ++++S  +F+ G    G LGHG   +  V            T++       
Sbjct: 399 VACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHT 458

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A VV+V+   + A      GQVFT GD      GH D +  +  P  V +L      QV 
Sbjct: 459 AAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLL-PECVISLTNENICQVA 517

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-----IAAG 278
            G + T   T RGHV+T GS  +GQLG+      PT K   P    G +V+     IA G
Sbjct: 518 CGHSLTVSRTSRGHVYTMGSTAYGQLGN------PTAKGNFPERVEGDIVEASVEEIACG 571

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             ++  +T    +Y++G G N  LGHG   ++ +P  +   R K +  +
Sbjct: 572 SYHVAVLTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAI 620


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 492

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 610

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 670

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 671 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 727

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 728 DQCQ-HFDTLR 737



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 548

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 549 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 607

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 608 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 666

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 667 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 724

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 725 GSN--DQCQHFDTLRVTKPEP 743



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 493

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 494 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 553

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 554 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 610

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 642



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 721 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 766


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 151/329 (45%), Gaps = 20/329 (6%)

Query: 147 PETTQCVSFTRINFPSAAHV---------VQVSASENHAAFVLQSGQVFTCGDNSSFCCG 197
           PE+    +F +  F   A           +++S  + H A V ++G++F  G N+    G
Sbjct: 10  PESGAVFTFGKSKFADNAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQLG 69

Query: 198 HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 257
              T   + +P  V+AL+    K    G   T   T RG+++ CG N  GQLG GD  DR
Sbjct: 70  -LGTKTTVNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDR 128

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
            +   +    + G +  +AAG +   A+T +G +Y  G  S   +G G++ + L P+ + 
Sbjct: 129 TSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS 188

Query: 318 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE--IDKTLPEPLSSLKS 375
             +R    V  VS G  H   +   G +YT+G+   G LG   E   +  +P+ ++ +  
Sbjct: 189 VGKR----VFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD 244

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
            + VQV      T  L +   VY FG   FG LG        ++  PR+++  R   V  
Sbjct: 245 RV-VQVACGGGHTVALTEN-EVYSFGLGQFGQLGHGTFIFESRL--PRVVEHFRKGRVKH 300

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + G  HT ++TD G L+ FGD    +LG
Sbjct: 301 AACGENHTALITDNGLLYTFGDGRHGKLG 329



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 157/346 (45%), Gaps = 33/346 (9%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQV 169
           ++I+ G  HT L++ N  +F  GS+  G LG G +TT     CV   R     +  V   
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALR-----SERVKLT 93

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAGLN 227
           +    H       G ++ CG N+    G  D N R  F   LVE   K  P K + AG N
Sbjct: 94  ACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAGSN 151

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT 286
            +  LT  G ++  G N+ GQ+G G   +  TP+ ++    VG  V  ++ G  +   VT
Sbjct: 152 TSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVT 207

Query: 287 GNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +G +Y+FG   +  LG   +   +   P+ +     +   VV+V+ G  H VAL +   
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL-TENE 263

Query: 345 VYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
           VY++G G  G LGHG  I +  LP  +   +          +  T ++ D G +Y FG  
Sbjct: 264 VYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDG 323

Query: 404 GFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGLYHTVVV 446
             G LG  +   +++    L PR LD    +HV  ++ G  H +V+
Sbjct: 324 RHGKLGLGEENFTNQFKPTLCPRFLD----YHVHSVTCGGCHMLVL 365



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 138/280 (49%), Gaps = 17/280 (6%)

Query: 89  NWKRVLRFLQSVEHSSDIVETSAGNQMQITT-GRYHTLLI-SNSSVFSCGSSLCGVLGHG 146
           NW ++    ++  +    V+     ++++T  GR HTL+  S  ++++CG +  G LG G
Sbjct: 64  NWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLG 123

Query: 147 PETTQCVSFTRINF-PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRP 204
            +     SF  + F      +  ++A  N +A + Q G+++  GDNS    G  +++N  
Sbjct: 124 -DCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESN-- 180

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKS 262
              P+ V   K V    V+ G   + F+T+ G ++T G    G+LG       +   P+ 
Sbjct: 181 ALTPQEVSVGKRVFW--VSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQ 238

Query: 263 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRR 321
           +  + +   VVQ+A G  + +A+T N  VYSFG G    LGHG    E + PR ++ FR+
Sbjct: 239 VTDIPD--RVVQVACGGGHTVALTEN-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRK 295

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
               V   + G+ H   +  +G +YT+G G  G LG G+E
Sbjct: 296 G--RVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEE 333



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 8/198 (4%)

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
           ++I+ G  +   VT NG ++ FGS +   LG G +    +P  ++  R + + +   + G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLT--ACG 96

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT-FVL 391
             H +   S G +Y  G    G LG GD  D+T    +        +++ A    T   L
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
              G +Y  G    G +G    G     L P+ +       V  +S G YH+  VT  G 
Sbjct: 157 TQDGRLYMRGDNSEGQIGL---GKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVDGA 211

Query: 452 LFGFGDNERAQLGHDTLR 469
           L+ FG+ +  +LG  T +
Sbjct: 212 LYTFGEKDSGKLGLSTEK 229



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 8/185 (4%)

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           SG+ F  G  +  D     A   F  K    +R+S GDEH   +  +G ++ +G    G 
Sbjct: 12  SGAVFTFGKSKFAD----NAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMFGSNNWGQ 67

Query: 356 LGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
           LG G +     P  + +L+S  + +  C R   T V    G++Y  G    G LG  D  
Sbjct: 68  LGLGTKTTVNKPTCVKALRSERVKLTACGRTH-TLVFTSRGNLYACGGNNEGQLGLGD-- 124

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +D+     +    +   +  ++ G   +  +T  GRL+  GDN   Q+G       L P
Sbjct: 125 CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTP 184

Query: 475 TEIFI 479
            E+ +
Sbjct: 185 QEVSV 189


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 190/438 (43%), Gaps = 40/438 (9%)

Query: 48  LYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRC----NGNWKRVLRFLQSVEHS 103
           L P +   L D+ A      HS+       V     N      +G   R L  +Q V   
Sbjct: 137 LAPVQVPGLTDVVALSSGIYHSLALRTDGTVWAWGDNASGQLGDGTATRRLSPVQ-VPGL 195

Query: 104 SDIVETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 162
           +D+V  SAG         YH+L + ++ +V++ GS+  G LG G  T +    + +    
Sbjct: 196 TDVVALSAGG--------YHSLAVRTDGTVWAWGSNFSGQLGDGTATPR---LSPVQVSG 244

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             +VV +SA +++   +   G V+  G NS    G   T  P   P  V  L  V    +
Sbjct: 245 LTNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGD-GTTTPRLSPVQVPGLTNVVA--L 301

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSY 281
           +AG + +  L   G V   G N +GQLG+G     PT +S + P+  +  VV ++AG S+
Sbjct: 302 SAGYSHSLALRTDGTVWAWGYNYNGQLGNG----IPTQRSPSIPVFGLIDVVALSAGYSH 357

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            LA+  +G V+++G  S   LG G       P  +         VV +SAGD H +AL +
Sbjct: 358 SLALRTDGTVWAWGYNSLGQLGDGTTIPRPSPVQVPDL----TDVVALSAGDSHSLALRT 413

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G V  WG  Y G LG G    +  P  +  L     V + A    T  L   G+V+ +G
Sbjct: 414 DGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTD--VVALSAGGNHTLALRTNGTVWAWG 471

Query: 402 WMGFGSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
               G LG       D    PR+  +  L   +V  +S G YH++ V   G ++ +G N 
Sbjct: 472 SNSDGQLG-------DGTTTPRLSPVQMLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNS 524

Query: 460 RAQLGHDTLRGCLEPTEI 477
             QLG  T    L P ++
Sbjct: 525 DGQLGDGTTTHRLTPVQV 542



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 162/350 (46%), Gaps = 21/350 (6%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H+L + ++ +V++ GS+  G LG G  T +    + +  P    VV +SA  +H
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRG---SPVQVPGLTDVVALSAGNHH 57

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              +   G V+  G NSS   G   T  P      V  L  V    ++AG ++T  L   
Sbjct: 58  CLALRTDGTVWAWGSNSSGQLGD-GTTTPRLSSVQVPGLTDVVA--LSAGSSYTLALRTD 114

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   G N +GQLG G T  R  P  +  L +V   V +++G  + LA+  +G V+++G
Sbjct: 115 GTVWAWGYNFYGQLGDGTTTPRLAPVQVPGLTDV---VALSSGIYHSLALRTDGTVWAWG 171

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             ++  LG G     L P  +         VV +SAG  H +A+ + G V+ WG  + G 
Sbjct: 172 DNASGQLGDGTATRRLSPVQVPGL----TDVVALSAGGYHSLAVRTDGTVWAWGSNFSGQ 227

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G    +  P  +S L +   V + A    T  L   G+V+ +G+  +G LG    G 
Sbjct: 228 LGDGTATPRLSPVQVSGLTN--VVALSADDSYTLALRTDGTVWAWGYNSYGQLG---DGT 282

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           +   L P  +  L   +V  +S G  H++ +   G ++ +G N   QLG+
Sbjct: 283 TTPRLSPVQVPGLT--NVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGN 330



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 166/365 (45%), Gaps = 21/365 (5%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +++G YH+L L ++ +V++ G +  G LG G  T +    + +  P    VV +SA  
Sbjct: 149 VALSSGIYHSLALRTDGTVWAWGDNASGQLGDGTATRR---LSPVQVPGLTDVVALSAGG 205

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  V   G V+  G N S   G   T  P   P  V  L  V    ++A  ++T  L 
Sbjct: 206 YHSLAVRTDGTVWAWGSNFSGQLGD-GTATPRLSPVQVSGLTNVVA--LSADDSYTLALR 262

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N++GQLG G T  R +P  +  L  V   V ++AG S+ LA+  +G V++
Sbjct: 263 TDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPGLTNV---VALSAGYSHSLALRTDGTVWA 319

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G   N  LG+G      +  +I  F    I VV +SAG  H +AL + G V+ WG    
Sbjct: 320 WGYNYNGQLGNGIPTQ--RSPSIPVFGL--IDVVALSAGYSHSLALRTDGTVWAWGYNSL 375

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G  I +  P P+        V + A    +  L   G+V  +G    G LG    
Sbjct: 376 GQLGDGTTIPR--PSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLG---D 430

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G +   L P  +  L    V  +S G  HT+ +   G ++ +G N   QLG  T    L 
Sbjct: 431 GTTTHRLSPVQVPDLT--DVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPRLS 488

Query: 474 PTEIF 478
           P ++ 
Sbjct: 489 PVQML 493



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 169/371 (45%), Gaps = 35/371 (9%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + ++ G  H+L L ++ +V++ G +  G LG G   T     + +  P    VV +SA +
Sbjct: 349 VALSAGYSHSLALRTDGTVWAWGYNSLGQLGDG---TTIPRPSPVQVPDLTDVVALSAGD 405

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN---RPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           +H+  +   G V   G N S   G   T     P+  P L + +       ++AG N T 
Sbjct: 406 SHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTDVVA------LSAGGNHTL 459

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGN 288
            L   G V   GSN+ GQLG G T    TP+ ++P++ +G  +VV ++AG  + LAV  +
Sbjct: 460 ALRTNGTVWAWGSNSDGQLGDGTT----TPR-LSPVQMLGLTNVVALSAGYYHSLAVHTD 514

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V+++GS S+  LG G     L P  +         VV +SAGD H +AL + G V+ W
Sbjct: 515 GTVWAWGSNSDGQLGDGTTTHRLTPVQVPGL----TDVVALSAGDSHSLALRTDGTVWAW 570

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G      LG G    +  P  +  L     V + A    +  L   G+V+ +G   +G L
Sbjct: 571 GSNSSSQLGDGTTTPRGSPVQVPGLTD--VVALSAGGAHSLALRTDGTVWAWGSNYYGQL 628

Query: 409 GFPDRGVSDKVLRPRILDSLRAH--HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
           G       D    PR+   L ++    S +  G  H++ +   G    +G+N   QLG  
Sbjct: 629 G-------DGTTTPRLFPVLVSNLTGTSNLYAGAGHSLALRTDGTGRAWGNNYGGQLGDG 681

Query: 467 TLRGCLEPTEI 477
           T    L P ++
Sbjct: 682 TSAFFLHPVQV 692



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 159/356 (44%), Gaps = 20/356 (5%)

Query: 122 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           Y   L ++ +V++ G +  G LG G  T +    + +  P   +VV +SA  +H+  +  
Sbjct: 257 YTLALRTDGTVWAWGYNSYGQLGDGTTTPR---LSPVQVPGLTNVVALSAGYSHSLALRT 313

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
            G V+  G N +   G+     P  R   +     +    ++AG + +  L   G V   
Sbjct: 314 DGTVWAWGYNYNGQLGN---GIPTQRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAW 370

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           G N+ GQLG G T+ RP+P  +  L +V   V ++AG S+ LA+  +G V ++G   +  
Sbjct: 371 GYNSLGQLGDGTTIPRPSPVQVPDLTDV---VALSAGDSHSLALRTDGTVRAWGVNYSGQ 427

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LG G     L P  +         VV +SAG  H +AL ++G V+ WG    G LG G  
Sbjct: 428 LGDGTTTHRLSPVQVPDL----TDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTT 483

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
             +  P  +  L +   V + A    +  +   G+V+ +G    G LG    G +   L 
Sbjct: 484 TPRLSPVQMLGLTN--VVALSAGYYHSLAVHTDGTVWAWGSNSDGQLG---DGTTTHRLT 538

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           P  +  L    V  +S G  H++ +   G ++ +G N  +QLG  T      P ++
Sbjct: 539 PVQVPGLT--DVVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQV 592



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 163/369 (44%), Gaps = 27/369 (7%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N + ++ G  H+L L ++ +V++ G +  G LG+G  T +  S           VV +SA
Sbjct: 297 NVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQRSPSIPVFGL---IDVVALSA 353

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             +H+  +   G V+  G NS    G   T   I RP  V+         ++AG + +  
Sbjct: 354 GYSHSLALRTDGTVWAWGYNSLGQLGDGTT---IPRPSPVQVPDLTDVVALSAGDSHSLA 410

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           L   G V   G N  GQLG G T  R +P  +  L +V   V ++AG ++ LA+  NG V
Sbjct: 411 LRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLTDV---VALSAGGNHTLALRTNGTV 467

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++GS S+  LG G     L P  +        +VV +SAG  H +A+ + G V+ WG  
Sbjct: 468 WAWGSNSDGQLGDGTTTPRLSPVQMLGL----TNVVALSAGYYHSLAVHTDGTVWAWGSN 523

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG-- 409
             G LG G    +  P  +  L     V + A    +  L   G+V+ +G      LG  
Sbjct: 524 SDGQLGDGTTTHRLTPVQVPGLTD--VVALSAGDSHSLALRTDGTVWAWGSNSSSQLGDG 581

Query: 410 -FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
               RG   +V  P + D      V  +S G  H++ +   G ++ +G N   QLG  T 
Sbjct: 582 TTTPRGSPVQV--PGLTD------VVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTT 633

Query: 469 RGCLEPTEI 477
              L P  +
Sbjct: 634 TPRLFPVLV 642



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 128/276 (46%), Gaps = 22/276 (7%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 158
           V   +D+V  SAG+         H+L L ++ +V + G +  G LG G  T +    + +
Sbjct: 392 VPDLTDVVALSAGDS--------HSLALRTDGTVRAWGVNYSGQLGDGTTTHR---LSPV 440

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
             P    VV +SA  NH   +  +G V+  G NS    G   T  P   P  V+ L    
Sbjct: 441 QVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGD-GTTTPRLSP--VQMLGLTN 497

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
              ++AG   +  +   G V   GSN+ GQLG G T  R TP  +  L +V   V ++AG
Sbjct: 498 VVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLTDV---VALSAG 554

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            S+ LA+  +G V+++GS S+  LG G       P  +         VV +SAG  H +A
Sbjct: 555 DSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPGL----TDVVALSAGGAHSLA 610

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           L + G V+ WG  Y G LG G    +  P  +S+L 
Sbjct: 611 LRTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVSNLT 646



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 11/203 (5%)

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           +AAG S+ LA+  +G V+++GS S+  LG G       P  +         VV +SAG+ 
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGL----TDVVALSAGNH 56

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H +AL + G V+ WG    G LG G    +     +  L     V + A    T  L   
Sbjct: 57  HCLALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLTD--VVALSAGSSYTLALRTD 114

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G+V+ +G+  +G LG    G +   L P  +  L    V  +S+G+YH++ +   G ++ 
Sbjct: 115 GTVWAWGYNFYGQLG---DGTTTPRLAPVQVPGLT--DVVALSSGIYHSLALRTDGTVWA 169

Query: 455 FGDNERAQLGHDTLRGCLEPTEI 477
           +GDN   QLG  T    L P ++
Sbjct: 170 WGDNASGQLGDGTATRRLSPVQV 192


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 147/338 (43%), Gaps = 11/338 (3%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +V + G +  G LG G  T +    T +  P+   +  ++A  +H+  +  +G V   G 
Sbjct: 58  TVLAWGDNFSGQLGDGTTTARSTPVT-VGLPAGTTITALAAGGSHSLALTDTGVVLAWGS 116

Query: 191 NSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
           NS    G    T+R    P  V    G     + AG   +  LT  G V   GSN++GQL
Sbjct: 117 NSRGQLGDGTTTDR--STPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQL 174

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G G T  R TP ++      G+ +   A  +Y LA+T  G   ++GS S   LG G   D
Sbjct: 175 GDGTTTARSTPVTVG--LPAGTTITALAASTYSLALTDTGAALAWGSNSRGQLGDGTTTD 232

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
              P  +      G  +  ++A  +H +AL  +G V  WG    G LG G   +++ P  
Sbjct: 233 RSTPVTVS--LPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVT 290

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           +          + A +  T VL   G+V  +G    G LG  D   +D+   P  +    
Sbjct: 291 VGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLG--DGTTTDRS-TPVTVGLPA 347

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
              ++ ++ G YH++ +TD G +  +G N   QLG  T
Sbjct: 348 GTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLGDGT 385



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 130/294 (44%), Gaps = 13/294 (4%)

Query: 120 GRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           G  H+L ++++ V  + GS+  G LG G  T +    T +  P+   +  ++A   H+  
Sbjct: 98  GGSHSLALTDTGVVLAWGSNSRGQLGDGTTTDRSTPVT-VGLPAGTTITALAAGRRHSLA 156

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTIR 235
           +  +G V   G NS+   G   T       R      G+P       L  + +   LT  
Sbjct: 157 LTDTGAVLAWGSNSNGQLGDGTTTA-----RSTPVTVGLPAGTTITALAASTYSLALTDT 211

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G     GSN+ GQLG G T DR TP +++ L    ++  +AA   + LA+T  G V ++G
Sbjct: 212 GAALAWGSNSRGQLGDGTTTDRSTPVTVS-LPAGTTITALAASYDHSLALTDTGAVLAWG 270

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           S SN  LG G   +   P  +      G  +  ++AG  H + L S+G V  WG    G 
Sbjct: 271 SNSNGQLGDGTTTNRSTP--VTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQ 328

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           LG G   D++ P  +          + A    +  L DTG+V  +G   +G LG
Sbjct: 329 LGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLG 382



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 127/305 (41%), Gaps = 8/305 (2%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V   GDN S   G   T      P  V    G     + AG + +  LT  G V   GSN
Sbjct: 59  VLAWGDNFSGQLGDGTTTA-RSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSN 117

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
           + GQLG G T DR TP ++  L    ++  +AAG  + LA+T  G V ++GS SN  LG 
Sbjct: 118 SRGQLGDGTTTDRSTPVTVG-LPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGD 176

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G       P  +      G  +  ++A   + +AL  +G    WG    G LG G   D+
Sbjct: 177 GTTTARSTP--VTVGLPAGTTITALAA-STYSLALTDTGAALAWGSNSRGQLGDGTTTDR 233

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
           + P  +S         + A    +  L DTG+V  +G    G LG    G +     P  
Sbjct: 234 STPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLG---DGTTTNRSTPVT 290

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           +       ++ ++ G  HT+V+T  G +  +G N   QLG  T      P  + +     
Sbjct: 291 VGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTT 350

Query: 485 DTGLA 489
            T LA
Sbjct: 351 ITALA 355



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 9/250 (3%)

Query: 120 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           GR H+L ++++ +V + GS+  G LG G  T +    T +  P+   +  ++AS    A 
Sbjct: 150 GRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARSTPVT-VGLPAGTTITALAASTYSLAL 208

Query: 179 VLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
              +G     G NS    G    T+R    P  V    G     + A  + +  LT  G 
Sbjct: 209 T-DTGAALAWGSNSRGQLGDGTTTDR--STPVTVSLPAGTTITALAASYDHSLALTDTGA 265

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V   GSN++GQLG G T +R TP ++  L    ++  +AAG S+ L +T  G V ++GS 
Sbjct: 266 VLAWGSNSNGQLGDGTTTNRSTPVTVG-LPAGTTITALAAGRSHTLVLTSAGAVLAWGSN 324

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
           SN  LG G   D   P  +      G  +  ++AG  H +AL  +G V  WG    G LG
Sbjct: 325 SNGQLGDGTTTDRSTP--VTVGLPAGTTITALAAGYYHSLALTDTGAVLAWGGNSYGQLG 382

Query: 358 HGDEIDKTLP 367
            G   D++ P
Sbjct: 383 DGTTTDRSTP 392



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 6/160 (3%)

Query: 107 VETSAGNQMQITTGRY-HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           V   AG  +      Y H+L ++++ +V + GS+  G LG G  T +    T +  P+  
Sbjct: 239 VSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVT-VGLPAGT 297

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVT 223
            +  ++A  +H   +  +G V   G NS+   G    T+R    P  V    G     + 
Sbjct: 298 TITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDR--STPVTVGLPAGTTITALA 355

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           AG   +  LT  G V   G N++GQLG G T DR TP ++
Sbjct: 356 AGYYHSLALTDTGAVLAWGGNSYGQLGDGTTTDRSTPVTV 395


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 650 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIIKIAAH 698

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 699 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 758

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 759 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 816

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 817 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 876

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 877 SWGKGDNQRLGH---GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 933

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 934 DQCQ-HFDTLR 943



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSASEN 174
           + G ++  L +   V+S G    G LGHG   P     V        +  HVV ++    
Sbjct: 699 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 758

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G      L +
Sbjct: 759 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 817

Query: 235 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +G VY
Sbjct: 818 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKDGQVY 876

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           S+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++WG   
Sbjct: 877 SWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSWGSN- 933

Query: 353 CGALGHGDEIDKTLPEP 369
                H D +  T PEP
Sbjct: 934 -DQCQHFDTLRVTKPEP 949



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 650 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIIKIAAHS 699

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 700 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 759

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 760 SAAITAEGELYTWGRGNYGRLGH---GSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 816

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VT+ G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 817 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 853



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 809 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 867

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 868 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 926

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPS 280
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+
Sbjct: 927 VHSWGSNDQCQ--HFDTLRVTKPEPSALPGL-DTKHIVGIACGPA 968


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 148/314 (47%), Gaps = 20/314 (6%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+A V ++G+VFT G+ S    GH      I  PRL+E+L       V  G   T  +T 
Sbjct: 88  HSALVTKNGEVFTWGEESGGRLGHGSREDSIH-PRLIESLAVCNVDIVACGEFHTCAVTT 146

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
            G ++T G  TH  G LGHG  +    PK IA   E  +V  ++ G  +   +T  G ++
Sbjct: 147 AGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLF 206

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------DS 341
           +FG G+   LGHG +     P+ +++    G+  + V+ G  H  A+            S
Sbjct: 207 TFGDGTFGVLGHGNRESISCPKEVESL--SGLKTISVACGVWHTAAIVEVIVTQSSSSIS 264

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           SG ++TWG G    LGHGD+  +  P  ++SL  +   ++      T  L  +G V   G
Sbjct: 265 SGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMG 324

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
              +G LG P    SD  + P +++ +   +V Q++ G YH  V+T +  +F +G     
Sbjct: 325 NTVYGQLGNPR---SDGKI-PCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANG 380

Query: 462 QLGHDTLRGCLEPT 475
           +LGH  +     PT
Sbjct: 381 RLGHGDIEDRKIPT 394



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 118/243 (48%), Gaps = 25/243 (10%)

Query: 253 DTLDRPTPKS----IAPLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           DT+ R T ++      PLE   V     +  G  +   VT NG V+++G  S   LGHG 
Sbjct: 54  DTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGS 113

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDK 364
           + D + PR I++     + +  V+ G+ H  A+ ++G +YTWG G    G LGHG ++  
Sbjct: 114 REDSIHPRLIESLAVCNVDI--VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSH 171

Query: 365 TLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
            +P+ ++     LAV  V      T ++   G ++ FG   FG LG  +R   + +  P+
Sbjct: 172 WIPKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNR---ESISCPK 228

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCL 472
            ++SL       ++ G++HT  + +            G+LF +GD ++ +LGH      L
Sbjct: 229 EVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRL 288

Query: 473 EPT 475
           +PT
Sbjct: 289 KPT 291



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 147/340 (43%), Gaps = 23/340 (6%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           ++  L+  N  VF+ G    G LGHG      +    I   +  +V  V+  E H   V 
Sbjct: 87  KHSALVTKNGEVFTWGEESGGRLGHGSR-EDSIHPRLIESLAVCNVDIVACGEFHTCAVT 145

Query: 181 QSGQVFTCGDNSSFC--CGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            +G+++T GD +      GH +D +  I + R+  AL+G+    V+ G   T  +T  G 
Sbjct: 146 TAGELYTWGDGTHNVGLLGHGKDVSHWIPK-RIAGALEGLAVAYVSCGTWHTALITTMGQ 204

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT----------- 286
           + T G  T G LGHG+      PK +  L  +   + +A G  +  A+            
Sbjct: 205 LFTFGDGTFGVLGHGNRESISCPKEVESLSGL-KTISVACGVWHTAAIVEVIVTQSSSSI 263

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++++G G    LGHG++   L+P  + +      H  R++ G    V L +SG V 
Sbjct: 264 SSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDFH--RIACGHSLTVGLTTSGKVL 321

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           + G    G LG+    D  +P  +  +     VQV        VL     V+ +G    G
Sbjct: 322 SMGNTVYGQLGN-PRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANG 380

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            LG  D  + D+ + P ++++LR   V  I+ G   T  +
Sbjct: 381 RLGHGD--IEDRKI-PTLVEALRDRSVRHIACGANFTAAI 417



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNSS---VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G +HT  ++ +     +  G+   G+LGHG + +  +            V  VS   
Sbjct: 134 VACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGT 193

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H A +   GQ+FT GD +    GH +    I  P+ VE+L G+    V  G+  T  + 
Sbjct: 194 WHTALITTMGQLFTFGDGTFGVLGHGN-RESISCPKEVESLSGLKTISVACGVWHTAAIV 252

Query: 234 -----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
                        G + T G     +LGHGD   R  P  +A L +     +IA G S  
Sbjct: 253 EVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY-DFHRIACGHSLT 311

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           + +T +G V S G+     LG+     ++ P  ++     G +VV+V+ G  HV  L   
Sbjct: 312 VGLTTSGKVLSMGNTVYGQLGNPRSDGKI-PCLVEEI--VGENVVQVACGSYHVAVLTIK 368

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V+TWGKG  G LGHGD  D+ +P  + +L+
Sbjct: 369 SEVFTWGKGANGRLGHGDIEDRKIPTLVEALR 400



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 18/274 (6%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           + RP+ +E+   +    V  G+  +  +T  G V T G  + G+LGHG   D   P+ I 
Sbjct: 65  VLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIE 124

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  V +V  +A G  +  AVT  G +Y++G G++    LGHG+      P+ I     +
Sbjct: 125 SL-AVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGA-LE 182

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V  VS G  H   + + G ++T+G G  G LGHG+    + P+ + SL     + V 
Sbjct: 183 GLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVA 242

Query: 383 ARKRKTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
                T  +V+            G ++ +G      LG  D+   +  L+P  + SL  +
Sbjct: 243 CGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDK---EPRLKPTCVASLIDY 299

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              +I+ G   TV +T  G++   G+    QLG+
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGN 333



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 104/223 (46%), Gaps = 22/223 (9%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++ G +HT LI+    +F+ G    GVLGHG  E+  C     +   S    + V+    
Sbjct: 189 VSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPK--EVESLSGLKTISVACGVW 246

Query: 175 HAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           H A +++           SG++FT GD      GH D   P  +P  V +L      ++ 
Sbjct: 247 HTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGD-KEPRLKPTCVASLIDYDFHRIA 305

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSY 281
            G + T  LT  G V + G+  +GQLG+     R   K    +EE+   +VVQ+A G  +
Sbjct: 306 CGHSLTVGLTTSGKVLSMGNTVYGQLGN----PRSDGKIPCLVEEIVGENVVQVACGSYH 361

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
           +  +T    V+++G G+N  LGHG+  D   P  ++  R + +
Sbjct: 362 VAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSV 404



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 6/187 (3%)

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           S  +GS+  +    + D L+P+ +++     +    V  G +H   +  +G V+TWG+  
Sbjct: 48  SVRTGSDTVVRSTVRTDVLRPKPLES--NLVLDAYHVDCGVKHSALVTKNGEVFTWGEES 105

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGF 410
            G LGHG   D   P  + SL       V   +  T  +   G +Y  G G    G LG 
Sbjct: 106 GGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGH 165

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
             + VS  + + RI  +L    V+ +S G +HT ++T  G+LF FGD     LGH     
Sbjct: 166 -GKDVSHWIPK-RIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRES 223

Query: 471 CLEPTEI 477
              P E+
Sbjct: 224 ISCPKEV 230



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 12/127 (9%)

Query: 340 DSSGYVYTWGKGYC-GALGHGDE--------IDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           DSSG VY WG+  C  ++  G +         D   P+PL S     A  V    + + +
Sbjct: 32  DSSGDVYVWGEVICDNSVRTGSDTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSAL 91

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G V+ +G    G LG    G  +  + PR+++SL   +V  ++ G +HT  VT  G
Sbjct: 92  VTKNGEVFTWGEESGGRLGH---GSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAG 148

Query: 451 RLFGFGD 457
            L+ +GD
Sbjct: 149 ELYTWGD 155


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 139/316 (43%), Gaps = 18/316 (5%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A V + G+VFT G+ S    GH   ++   +P LVE    V    V  G   T  ++ 
Sbjct: 102 HLAIVSREGKVFTWGEESGGRLGH-GIDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSK 160

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
             +  T G  TH  G LGHG+ +    PKS+    +   VV +A G  +    T NG ++
Sbjct: 161 CDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGSWHSALATSNGKLF 220

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----------DSS 342
           +FG G+   LGHG+Q   + P+ +Q     G+  V+V+ G  H  A+           SS
Sbjct: 221 TFGDGTFGVLGHGDQESVMYPKEVQLL--SGLKTVKVACGVWHTAAIIEVAFQSGSNASS 278

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
             ++TWG G    LGHG++     P  +S L  +   Q+      T  L  +G V+  G 
Sbjct: 279 WKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQQIACGHTMTVALTTSGHVFTMGS 338

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
              G LG P+       L   + D L    + +IS G +H   VT R  L+ +G     +
Sbjct: 339 TENGQLGNPNAAGKVPTL---VQDKLLGEFIEEISCGAHHVAAVTSRSELYTWGKGSNGR 395

Query: 463 LGHDTLRGCLEPTEIF 478
           LGH        PT + 
Sbjct: 396 LGHGDTDDRKSPTLVL 411



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 129/280 (46%), Gaps = 18/280 (6%)

Query: 117 ITTGRYHTLLISNSSVFSC---GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +  G +HT  +S    F     G+   G+LGHG E +  +  +   F     VV V+   
Sbjct: 148 VACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACGS 207

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 232
            H+A    +G++FT GD +    GH D    +  P+ V+ L G+   +V  G+  T  + 
Sbjct: 208 WHSALATSNGKLFTFGDGTFGVLGHGD-QESVMYPKEVQLLSGLKTVKVACGVWHTAAII 266

Query: 233 ---------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
                         + T G     +LGHG+      P  ++PL E  +  QIA G +  +
Sbjct: 267 EVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEY-NFQQIACGHTMTV 325

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           A+T +G V++ GS  N  LG+     ++ P  +Q  +  G  +  +S G  HV A+ S  
Sbjct: 326 ALTTSGHVFTMGSTENGQLGNPNAAGKV-PTLVQD-KLLGEFIEEISCGAHHVAAVTSRS 383

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVC 382
            +YTWGKG  G LGHGD  D+  P  + +LK  HL    C
Sbjct: 384 ELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISC 423



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 133/295 (45%), Gaps = 21/295 (7%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PRL+E+   +  + + +G +    ++  G V T G  + G+LGHG   D   P  + 
Sbjct: 79  VLTPRLLESTVVLDVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKDFGKPH-LV 137

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
              +V ++  +A G  +  AV+     +++G G++    LGHG +     P+++  F   
Sbjct: 138 EFPDVVTLDIVACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGF-LD 196

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ VV V+ G  H     S+G ++T+G G  G LGHGD+     P+ +  L     V+V 
Sbjct: 197 GLRVVSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKTVKVA 256

Query: 383 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
                T  +++     G        F W G G       G  D  L+P  +  L  ++  
Sbjct: 257 CGVWHTAAIIEVAFQSGSNASSWKLFTW-GDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQ 315

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-------FIQEM 482
           QI+ G   TV +T  G +F  G  E  QLG+    G + PT +       FI+E+
Sbjct: 316 QIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKV-PTLVQDKLLGEFIEEI 369



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 88/206 (42%), Gaps = 16/206 (7%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G S    +   G VY +G    F  G   + D L PR +++     + V  + +G  H+ 
Sbjct: 49  GGSEADDIESKGDVYIWGEV--FADGFPSKTDVLTPRLLES--TVVLDVRDIVSGTHHLA 104

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP-LSSLKS--HLAVQVCARKRKTFV-LVD 393
            +   G V+TWG+   G LGHG  IDK   +P L        L +  C     + V   D
Sbjct: 105 IVSREGKVFTWGEESGGRLGHG--IDKDFGKPHLVEFPDVVTLDIVACGEFHTSAVSKCD 162

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPR--ILDSLRAHHVSQISTGLYHTVVVTDRGR 451
               +G G    G LG  +  +S  + +     LD LR   V  ++ G +H+ + T  G+
Sbjct: 163 NFFTWGDGTHNVGLLGHGNE-ISHWIPKSVNGFLDGLR---VVSVACGSWHSALATSNGK 218

Query: 452 LFGFGDNERAQLGHDTLRGCLEPTEI 477
           LF FGD     LGH      + P E+
Sbjct: 219 LFTFGDGTFGVLGHGDQESVMYPKEV 244



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 94/253 (37%), Gaps = 70/253 (27%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G +H+ L  SN  +F+ G    GVLGHG +  + V + + +   S    V+V+  
Sbjct: 201 VSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQ--ESVMYPKEVQLLSGLKTVKVACG 258

Query: 173 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             H A +++          S ++FT GD   F  GH + +    +P  V  L     +Q+
Sbjct: 259 VWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDM-YLKPTRVSPLIEYNFQQI 317

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLG-------------------------------- 250
             G   T  LT  GHV T GS  +GQLG                                
Sbjct: 318 ACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEFIEEISCGAHHVA 377

Query: 251 --------------------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
                               HGDT DR +P  +  L++   +  I+ G ++   V     
Sbjct: 378 AVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKD-RHLKNISCGSNFTSCVCNQK- 435

Query: 291 VYSFGSGSNFCLG 303
            Y  G+  + C G
Sbjct: 436 -YVSGTDQSVCFG 447


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 24/307 (7%)

Query: 108 ETSAGNQM-QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI 158
           E S G ++ Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    +
Sbjct: 18  ERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNV 77

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
           +         VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+ 
Sbjct: 78  DL--------VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAA 277
             QV+ G   +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AA
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAA 188

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDE 334
           G ++  A++  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDE
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDE 246

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L   G V+T+G    G LG+    +K  P+ +  +   ++   C        +  T
Sbjct: 247 HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTT 306

Query: 395 GSVYGFG 401
           G V  FG
Sbjct: 307 GQVISFG 313


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 167/363 (46%), Gaps = 34/363 (9%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSASENHAAFVLQSGQVFTC 188
           V+S G +  G L  G +TT   +  R++  ++ H   VV V+      A + + G V+TC
Sbjct: 33  VYSFGQNTYGELALG-DTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTC 91

Query: 189 GDNSSFCCGHRDTNR-PIFR-------PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           G N S  C    T R P  R        R V    G   + + A       L   G+++T
Sbjct: 92  GYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSGNGSEHLAA-------LHANGNLYT 144

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGVVYSFGSGS 298
            G N  GQLG G +    T      +EE+        G SY     V  NG +Y+ G   
Sbjct: 145 VGFNMRGQLGLGSS---TTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCND 201

Query: 299 NFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              LG G+  + EL PR ++ F R+   V+ V+ G  + +A    G V  +GK   G LG
Sbjct: 202 YGQLGLGDHRNGELVPRPVEYFFRR--PVLAVACGQHYTIASLRDGGVVAFGKNDHGQLG 259

Query: 358 HGDEIDKTLPEP--LSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
             D   + + +P  L++    L V Q+      T V+ + G+VY FG   +G LG    G
Sbjct: 260 L-DSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGL---G 315

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
               + RP  ++SL    ++Q++ G YHT+V++D G++F FG N   QLG +T   CL P
Sbjct: 316 HKMHMARPARVESLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSP 375

Query: 475 TEI 477
             I
Sbjct: 376 QLI 378



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 157/358 (43%), Gaps = 26/358 (7%)

Query: 97  LQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 156
           L +  H   +V+ + GN+          +L  +  V++CG +  G    G  TT+ V   
Sbjct: 60  LGNSNHGRRVVDVACGNEQT-------AILFEDGDVYTCGYNDSGQCAIG--TTERVPTL 110

Query: 157 RINFP--SAAHVVQVSASE--NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 212
           R + P  S+   V++ +     H A +  +G ++T G N     G   ++  +    LVE
Sbjct: 111 RFS-PGLSSNRTVRIFSGNGSEHLAALHANGNLYTVGFNMRGQLG-LGSSTTVMEATLVE 168

Query: 213 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEV-- 269
            L G     V      T  +   G ++ CG N +GQLG GD  +    P+   P+E    
Sbjct: 169 ELAGKRVADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPR---PVEYFFR 225

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVR 328
             V+ +A G  Y +A   +G V +FG   +  LG     + + QP  +     + + V +
Sbjct: 226 RPVLAVACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLV-VPQ 284

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 388
           +S G  H   +   G VYT+G+   G LG G ++    P  + SL      QV      T
Sbjct: 285 LSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHT 344

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            VL D G V+ FG    G LG      S   L P+++ +LR   V++++ G YH+V +
Sbjct: 345 LVLSDDGKVFPFGRNNHGQLGLE---TSVDCLSPQLISTLRNKTVTKVAAGFYHSVCL 399



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 8/177 (4%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSAS 172
           + +  G+++T+  + +  V + G +  G LG    +      TR+  P    VV Q+S  
Sbjct: 229 LAVACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCG 288

Query: 173 ENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            +H A V + G V+T G N       GH+     + RP  VE+L  +   QV  G   T 
Sbjct: 289 YHHTAVVTEDGAVYTFGRNDYGQLGLGHK---MHMARPARVESLARMRITQVACGCYHTL 345

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            L+  G V   G N HGQLG   ++D  +P+ I+ L    +V ++AAG  + + + G
Sbjct: 346 VLSDDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRN-KTVTKVAAGFYHSVCLVG 401


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 179/399 (44%), Gaps = 39/399 (9%)

Query: 90  WKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNS----SVFSCGSSLCGVLGH 145
           ++++  F +   ++  +   S    + +T+G +   + +++    +V++ G    G LG 
Sbjct: 3   YQKMYNFFKQKTNTKRLFTAS----LLVTSGFFAQSIFTDTPPQKTVYAWGYGNFGQLGL 58

Query: 146 GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRP 204
             E  Q  S   +   S  ++++V A+++ +  + Q G+V+T G N     GH D T+  
Sbjct: 59  ANENNQ-YSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFN 117

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH------------- 251
           + +P LVE L+ +  KQ++ G      ++  G ++T G+  HG+LGH             
Sbjct: 118 MIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKR 177

Query: 252 -GDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-G 305
                D       P  +  L  +    Q++ G  + + +T NG VYSFG+     LG+  
Sbjct: 178 GNQNYDYAEGSMLPTKVQSLNGI-KCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQS 236

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           E+    QP+ I   +    +++ +  G +   A+ SSG VYTWG    G LG+   I + 
Sbjct: 237 EETGNFQPKKIPDLQ----NIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQA 292

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
            P  ++    +  + +         L + G ++ +G+   G LG  +R   + +  P+ +
Sbjct: 293 RPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNR---NDLYAPKQI 349

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +      + ++  G  HT  +T   +L+ FG     QLG
Sbjct: 350 EF--KEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLG 386



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 17/227 (7%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G++  +L  N  V+S G+S+ G LG+  E T   +F     P   +++ +   +  +A V
Sbjct: 209 GQFTVVLTENGEVYSFGNSMKGQLGYQSEETG--NFQPKKIPDLQNIINIDCGQQFSAAV 266

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
             SG+V+T G+N     G    N+ I+  RP  V    G     ++ G NF   L+  G 
Sbjct: 267 SSSGKVYTWGNNDH---GQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGK 323

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           + T G    GQLGH +  D   PK I   E+   ++++  G ++   +T N  +Y FG G
Sbjct: 324 LFTWGYGNDGQLGHSNRNDLYAPKQIEFKEK---IIKVDCGGTHTAFLTQNNQLYLFGRG 380

Query: 298 SNFCLGHGEQHD-----ELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           +   LG GE  +        P+ ++ F++  + VV V+ G E+ +A+
Sbjct: 381 NEGQLGIGENIESEAAIRTTPKIVEFFKK--MKVVDVTCGGEYTLAI 425



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 29/297 (9%)

Query: 206 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSI 263
           + P+ VE L      +V A  + +  L+  G V+T G N  G LGH D  + +   P+ +
Sbjct: 65  YSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELV 124

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-------------GEQHDE 310
             LE +  + QI+ GP +M A++ +G +Y++G+  +  LGH             G Q+ +
Sbjct: 125 EKLENI-QIKQISCGPFHMAAISQDGELYTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYD 183

Query: 311 -----LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH-GDEIDK 364
                + P  +Q+    GI   +VS G +  V L  +G VY++G    G LG+  +E   
Sbjct: 184 YAEGSMLPTKVQSLN--GIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGN 241

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
             P+ +  L++ + +  C ++    V   +G VY +G    G LG      S    RP  
Sbjct: 242 FQPKKIPDLQNIINID-CGQQFSAAV-SSSGKVYTWGNNDHGQLG---NNQSIYQARPNQ 296

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           +     + +  IS G      +++ G+LF +G     QLGH        P +I  +E
Sbjct: 297 VTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQIEFKE 353



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 20/206 (9%)

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VY++G G+   LG   ++++  P+ ++    +  ++++V A     +AL   G VYTWG
Sbjct: 44  TVYAWGYGNFGQLGLANENNQYSPQEVEKLSDR--NIIKVKANKSVSMALSQDGKVYTWG 101

Query: 350 KGYCGALGHGD--EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           K   G LGH D    +   PE +  L++    Q+         +   G +Y +G    G 
Sbjct: 102 KNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGK 161

Query: 408 LGFPDRGVSDKV---------------LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
           LG   +  S+KV               + P  + SL      Q+S G   TVV+T+ G +
Sbjct: 162 LGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEV 221

Query: 453 FGFGDNERAQLGHDTLR-GCLEPTEI 477
           + FG++ + QLG+ +   G  +P +I
Sbjct: 222 YSFGNSMKGQLGYQSEETGNFQPKKI 247


>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           + + +++ + GS   G LG G    +      I    + +V  V A   ++  + + G++
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLG-NNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKL 59

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119

Query: 246 HGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           +GQ G      D   RP  + IA  +       V Q+AAG ++ + +T  G V+++G   
Sbjct: 120 YGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 177

Query: 299 NFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 353
                         P  I       R +G+ +VR ++ G  H +AL   G ++ WG    
Sbjct: 178 -----------PWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEY 226

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG GD   ++ P P+  L     V + A    +  L D G VYG+G    G LGF D 
Sbjct: 227 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDN 286

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
             S K++ P+ +  L    + QIS G  H+V VT  GR+F FG  +  +LG+       +
Sbjct: 287 DKSSKMV-PQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQ 345

Query: 474 PTEIFI 479
           P E+ I
Sbjct: 346 PEEVPI 351



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 146/358 (40%), Gaps = 45/358 (12%)

Query: 70  IYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS- 128
           I  G   + Q+ L N     W   ++ L+S             N   +  G  ++L I+ 
Sbjct: 8   IAWGSGEDGQLGLGNNEEREWVCAIKALESQ------------NVCSVVAGSRNSLAITE 55

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 188
           +  +F+ G +  G LGH   T      +++   S   +VQ +    H   V   G+ +  
Sbjct: 56  DGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAW 115

Query: 189 GDNSSFCCGHR-----DTNRPIFR---------PRLVEALKGVPCKQVTAGLNFTGFLTI 234
           G N    CG       +T RP  R         P+L+        +QV AG   +  LT 
Sbjct: 116 GGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLI-------VRQVAAGGTHSVVLTR 168

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            GHV T G         GD      P  +  L+    V  IA G  + LA+  +G ++++
Sbjct: 169 EGHVWTWGQ----PWPPGDITQISVPVRVQGLD---MVRLIAVGAFHNLALQEDGTLWAW 221

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G+     LG G+     QP  +Q     G+ +V ++AG  H  AL  +G VY WG+G  G
Sbjct: 222 GNNEYGQLGTGDTQPRSQPIPVQGL--SGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHG 279

Query: 355 ALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            LG G  D+  K +P+ +  L     VQ+      +  +   G ++ FG    G LG+
Sbjct: 280 RLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 492

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 610

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 670

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 671 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 727

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 728 DQCQ-HFDTLR 737



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 548

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 549 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 607

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 608 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 666

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 667 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 724

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 725 GSN--DQCQHFDTLRVTKPEP 743



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 444 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 493

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 494 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 553

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 554 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 610

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 642



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 603 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 661

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 662 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 720

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 721 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 766


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/422 (24%), Positives = 183/422 (43%), Gaps = 46/422 (10%)

Query: 75  SRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET---SAGNQMQITT-GRYHTLLISNS 130
           S+ ++ +   + + N++   +F +  +   D++E    S  N+  +    +YH       
Sbjct: 31  SKGIKEQTNYKEDQNFQSRKKFEEYEQEGEDLMEKCMMSWPNKYSLDQIKKYHAY----- 85

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
            V+S G +  G LG G    + +   R+       V+ +S+   H+  V + G+++ CG 
Sbjct: 86  -VWSFGQNTKGELGTG-HYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGS 143

Query: 191 NSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
           N     G       ++  F+P  VE L  +  KQV  G   T  L+  G V+  G + H 
Sbjct: 144 NLHDKLGLEGITTGSKKTFKP--VELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHN 201

Query: 248 QLGHGDTLDRPTPKSIAPLEEV---GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
           + G      +   K    L +      + QI  G  + LA+  NG +YS+G G     GH
Sbjct: 202 KRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGH 261

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G+  D+  P+ I+ F   G  + ++ AG+ H +A+ +   VY WG G  G  G G+  + 
Sbjct: 262 GKFEDQETPQRIKFF--DGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENT 319

Query: 365 TLP---------------------EPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGW 402
            +P                     E L   K    + Q+ A +  T VL  +G ++ FG+
Sbjct: 320 AIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGY 379

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
              G LG       D   RP++++ +  H   Q++ G  H++ +T++  ++  G+N+  Q
Sbjct: 380 NQQGQLG---HNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTNKNDVYACGNNQYGQ 436

Query: 463 LG 464
            G
Sbjct: 437 CG 438



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 148/315 (46%), Gaps = 29/315 (9%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V++ G N+    G    N  +  P  V  L  +    +++G   +G +T  G +  CGSN
Sbjct: 86  VWSFGQNTKGELGTGHYNE-VLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSN 144

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
            H +LG  + +   + K+  P+E +  +   Q+A G  + LA++  G VY +G   +   
Sbjct: 145 LHDKLGL-EGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKR 203

Query: 303 GHGEQ----HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
           G   Q    + + +P  +Q+F   G  + ++  GD H +ALD +G +Y+WG G  G  GH
Sbjct: 204 GDRSQERKDNAKYKPVLLQSF--AGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGH 261

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG-----FGWMGFGS------ 407
           G   D+  P+ +      +  Q+ A    T  +     VY      +G  GFG       
Sbjct: 262 GKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAI 321

Query: 408 ---LGFPDRGVS----DKVLRPRILDSLR-AHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
              + FP +G +    D  ++  IL+  +    + QI+ G  HT+V+T  G++F FG N+
Sbjct: 322 PQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQ 381

Query: 460 RAQLGHDTLRGCLEP 474
           + QLGH+T+     P
Sbjct: 382 QGQLGHNTVDNYCRP 396



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 159/355 (44%), Gaps = 30/355 (8%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           G++  L+  +  ++ CGS+L   LG  G  T    +F  +   +   + QV+  + H   
Sbjct: 126 GKHSGLVTEDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLA 185

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRP---IFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           + + GQV+  G +     G R   R     ++P L+++  G   KQ+  G   +  L   
Sbjct: 186 LSKEGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDN 245

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSF 294
           G +++ G    G+ GHG   D+ TP+ I   +  G ++ QI AG  + LA+T +  VY++
Sbjct: 246 GTLYSWGVGEKGECGHGKFEDQETPQRIKFFD--GKIITQIEAGNHHTLAITADNQVYAW 303

Query: 295 GSGSNFCLGHGEQHDELQPR--------------------AIQTFRRKGIHVVRVSAGDE 334
           G G     G GE  +   P+                     I  F +    + +++AG+ 
Sbjct: 304 GDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEM 363

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H + L SSG ++++G    G LGH    +   P+ +  + +H  VQV A +  +  L + 
Sbjct: 364 HTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCLTNK 423

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
             VY  G   +G  G PDR +        +L SL + +  ++  G +H+ VV D 
Sbjct: 424 NDVYACGNNQYGQCGLPDREMRKTF--SHVL-SLLSVNSFKLYAGGFHSWVVLDE 475


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 24/307 (7%)

Query: 108 ETSAGNQM-QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI 158
           E S G ++ Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    +
Sbjct: 18  ERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNV 77

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
           +         VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+ 
Sbjct: 78  DL--------VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAA 277
             QV+ G   +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AA
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAA 188

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDE 334
           G ++  A++  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDE
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDE 246

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L   G V+T+G    G LG+    +K  P+ +  +   ++   C        +  T
Sbjct: 247 HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTT 306

Query: 395 GSVYGFG 401
           G V  FG
Sbjct: 307 GQVISFG 313


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 415 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 463

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 464 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 523

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 524 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 581

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 582 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 641

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 642 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 698

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 699 DQCQ-HFDTLR 708



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 464 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 519

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 520 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 578

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 579 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 637

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 638 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 695

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 696 GSN--DQCQHFDTLRVTKPEP 714



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 415 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 464

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 465 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 524

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 525 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 581

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 582 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 613



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 574 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 632

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 633 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 691

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 692 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 737


>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           + + +++ + GS   G LG G    +      I    + +V  V A   ++  + + G++
Sbjct: 1   MAAGTAIIAWGSGEDGQLGLG-NNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKL 59

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119

Query: 246 HGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           +GQ G      D   RP  + IA  +       V Q+AAG ++ + +T  G V+++G   
Sbjct: 120 YGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQ-- 177

Query: 299 NFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 353
                         P  I       R +G+ +VR ++ G  H +AL   G ++ WG    
Sbjct: 178 -----------PWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEY 226

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG GD   ++ P P+  L     V + A    +  L D G VYG+G    G LGF D 
Sbjct: 227 GQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDN 286

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
             S K++ P+ +  L    + QIS G  H+V VT  GR+F FG  +  +LG+       +
Sbjct: 287 DKSSKMV-PQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQ 345

Query: 474 PTEIFI 479
           P E+ I
Sbjct: 346 PEEVPI 351



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 146/358 (40%), Gaps = 45/358 (12%)

Query: 70  IYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS- 128
           I  G   + Q+ L N     W   ++ L+S             N   +  G  ++L I+ 
Sbjct: 8   IAWGSGEDGQLGLGNNEEREWVCAIKALESQ------------NVCSVVAGSRNSLAITE 55

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 188
           +  +F+ G +  G LGH   T      +++   S   +VQ +    H   V   G+ +  
Sbjct: 56  DGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAW 115

Query: 189 GDNSSFCCGHR-----DTNRPIFR---------PRLVEALKGVPCKQVTAGLNFTGFLTI 234
           G N    CG       +T RP  R         P+L+        +QV AG   +  LT 
Sbjct: 116 GGNEYGQCGEEPEKKDNTGRPPRRDIAIPQRCAPKLI-------VRQVAAGGTHSVVLTR 168

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            GHV T G         GD      P  +  L+    V  IA G  + LA+  +G ++++
Sbjct: 169 EGHVWTWGQ----PWPPGDITQISVPVRVQGLD---MVRLIAVGAFHNLALQEDGTLWAW 221

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G+     LG G+     QP  +Q     G+ +V ++AG  H  AL  +G VY WG+G  G
Sbjct: 222 GNNEYGQLGTGDTQPRSQPIPVQGL--SGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHG 279

Query: 355 ALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            LG G  D+  K +P+ +  L     VQ+      +  +   G ++ FG    G LG+
Sbjct: 280 RLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGY 337


>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1279

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 169/372 (45%), Gaps = 35/372 (9%)

Query: 120  GRYHTLLISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAH----VVQVSASEN 174
            G +   + S+ + ++ G++  G L   P + +   +  RI  P  A       QV+A ++
Sbjct: 801  GSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRIPLPDGADSSFTYTQVAAGDS 860

Query: 175  HAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGF 231
            H   +  +G V++ G N     G    T+R  + P+ V+   G P K  QV+AG+  +  
Sbjct: 861  HVLAIGSNGIVYSWGRNDHGQLGDGTTTDR--YNPQPVKDTGGQPFKAVQVSAGVADSAA 918

Query: 232  LTIRGHVHTCGSNTHGQ---LGHGDTLDRPTPKSIAPLEEVGSV---VQIAAGPSYMLAV 285
            +     V+T GS + G+     +  T   PTP   A  +  G     VQ++   S+++A+
Sbjct: 919  IDSENRVYTWGSESTGKGQTPAYSTTRKNPTPA--ADPDNPGQTLHAVQVSLNWSFVMAL 976

Query: 286  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
              +G VY++G  +N  LG+G                +     ++SAG  H +A+D+ G  
Sbjct: 977  DADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAIDTDGNT 1036

Query: 346  YTWGKGYCGALGHGDEIDKTLPE----PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            +TWG    G LG G   DK  P+    P  + +S  A Q+ A    + V+   GS++ +G
Sbjct: 1037 WTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWAWG 1096

Query: 402  WMGFGSLGFPDR-------GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
            W   G LG  +         + D   + +   ++R+      S G  H++ +   G L+ 
Sbjct: 1097 WNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRS------SAGQLHSLAIRQDGNLWA 1150

Query: 455  FGDNERAQLGHD 466
            +GDN+  QLG++
Sbjct: 1151 WGDNQYGQLGNN 1162



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 128/277 (46%), Gaps = 19/277 (6%)

Query: 215  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVG-- 270
            +G+   QV+AG +F+  +   G+ +  G+N +GQL     D   + TP  I PL +    
Sbjct: 790  RGIRFDQVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRI-PLPDGADS 848

Query: 271  --SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
              +  Q+AAG S++LA+  NG+VYS+G   +  LG G   D   P+ ++    +    V+
Sbjct: 849  SFTYTQVAAGDSHVLAIGSNGIVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQPFKAVQ 908

Query: 329  VSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
            VSAG     A+DS   VYTW     GKG   A     +      +P +  ++  AVQV  
Sbjct: 909  VSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLHAVQVSL 968

Query: 384  RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGL 440
                   L   G+VY +G+   G LG    G SD       P  L S ++   SQIS G 
Sbjct: 969  NWSFVMALDADGNVYTWGYNTNGQLG---NGTSDSTSYASNPARLPS-QSFQASQISAGS 1024

Query: 441  YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +H + +   G  + +G N   QLG  +     +P  +
Sbjct: 1025 WHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTV 1061



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 14/217 (6%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-----PIFRPRLVEALK 215
           P      QVSA   H   V   G +++ G N     G   T       P+ +P+ V   +
Sbjct: 231 PRGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVS--Q 288

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---V 272
                Q +AG  F+  L   G +++ G NT+GQLG+  T    TP+ +   +   S    
Sbjct: 289 DFTWVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTW 348

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG---EQHDELQPRAIQTFRRKGIHVVRV 329
            Q A G  + L +  +G +YS+G   +  LG G   E+H  +Q + + +    G    ++
Sbjct: 349 KQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVK-MPSGVPSGFAWKQM 407

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           S    H +AL S  ++Y WG    G +G G   D  +
Sbjct: 408 SGWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKI 444



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 158/376 (42%), Gaps = 29/376 (7%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQVS 170
           Q++ GR H L + S+ +++S GS+  G LG G  T +      +  P         VQ S
Sbjct: 238 QVSAGRGHILAVASDGNLYSWGSNDHGQLGDG-TTAERHEPVPVKKPQGVSQDFTWVQAS 296

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-----RPIFRPRLVEALKGVPCKQVTAG 225
           A    +  +   G++++ GDN+    G+  T       P+  P+   A  G   KQ   G
Sbjct: 297 AGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQ--NAPSGFTWKQEAVG 354

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYM 282
                 L   G++++ G N H QLG G T +R  P  +     V S     Q++    + 
Sbjct: 355 SLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSGWGWHS 414

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFR--RKGIHVVRVSAGDEHVVAL 339
           LA+  +  +Y +G+ +   +G G   D ++ P  I T +         +   GD +  A+
Sbjct: 415 LALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQMGDYYSQAI 474

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLP----EPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            S G +YTWG G  G +G+G  +D   P    +P   L +    QV      +  +   G
Sbjct: 475 GSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQVSLLSVASLAIGSDG 534

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH---HVSQISTGL-YHTVVVTDRGR 451
           ++Y +G    G LG  D   + +    R+     A       Q S G   ++  +   G 
Sbjct: 535 NLYSWGANNNGQLG--DNTTTQRNTPIRVAAPQNAPTGLTWVQASAGWDNNSFGLASDGN 592

Query: 452 LFGFGDNERAQLGHDT 467
           L+ +G N   QLG +T
Sbjct: 593 LYSWGKNANGQLGDNT 608



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 9/196 (4%)

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---S 271
           +G+   QV+AG      +   G++++ GSN HGQLG G T +R  P  +   + V    +
Sbjct: 232 RGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFT 291

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRV 329
            VQ +AG  + + +  +G +YS+G  +   LG+     H   +P  +      G    + 
Sbjct: 292 WVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLPQNAPSGFTWKQE 351

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAV-QVCARK 385
           + G  H + L S G +Y+WG      LG G   ++  P   +  S + S  A  Q+    
Sbjct: 352 AVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGVPSGFAWKQMSGWG 411

Query: 386 RKTFVLVDTGSVYGFG 401
             +  L     +YG+G
Sbjct: 412 WHSLALGSDNWIYGWG 427



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 9/189 (4%)

Query: 126  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFVLQSGQ 184
            L ++ +V++ G +  G LG+G   +   +      PS +    Q+SA   HA  +   G 
Sbjct: 976  LDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQISAGSWHALAIDTDGN 1035

Query: 185  VFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             +T G N     G   T+   ++P+ V    +  + +   Q++AG++ +  +   G +  
Sbjct: 1036 TWTWGYNGYGQLGDGSTSD-KYKPQTVQNPTDTSQSLKATQISAGVDHSLVVDRDGSLWA 1094

Query: 241  CGSNTHGQLGHGDTLDRPTPKSI---APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
             G N++GQLG G+T+++  P +I   A   +    V+ +AG  + LA+  +G ++++G  
Sbjct: 1095 WGWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRSSAGQLHSLAIRQDGNLWAWGDN 1154

Query: 298  SNFCLGHGE 306
                LG+ +
Sbjct: 1155 QYGQLGNNQ 1163



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 7/162 (4%)

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL----KSHL 377
           +GI   +VSAG  H++A+ S G +Y+WG    G LG G   ++  P P+       +   
Sbjct: 232 RGIRFSQVSAGRGHILAVASDGNLYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFT 291

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQ 435
            VQ  A    +  L   G +Y +G   +G LG  +   +     P  L  ++       Q
Sbjct: 292 WVQASAGYLFSVGLGSDGKLYSWGDNTYGQLGN-NTTTAHYTPEPVNLPQNAPSGFTWKQ 350

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            + G  H + +   G L+ +GDN+  QLG  T      P ++
Sbjct: 351 EAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQV 392



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 119/273 (43%), Gaps = 28/273 (10%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQVS 170
           Q   G  H L L S+ +++S G +    LG G  TT+  +  ++  PS         Q+S
Sbjct: 350 QEAVGSLHALGLGSDGNLYSWGDNDHNQLGDG-TTTERHAPIQVKMPSGVPSGFAWKQMS 408

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK----QVTAGL 226
               H+  +     ++  G N+    G          P  +   +GVP      Q   G 
Sbjct: 409 GWGWHSLALGSDNWIYGWGANTRGEVGTGSITDNKITPVRIATPQGVPSNFTWGQFQMGD 468

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPT----PKSIAP---LEEVGSVVQIAA 277
            ++  +   G+++T G   +G +G+G T+D   PT    P  + P    ++V S++ +A+
Sbjct: 469 YYSQAIGSDGNIYTWGYGGNGNVGNGSTVDVYGPTQAHKPNGVLPNFSWKQV-SLLSVAS 527

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK--GIHVVRVSAG-DE 334
                LA+  +G +YS+G+ +N  LG         P  +   +    G+  V+ SAG D 
Sbjct: 528 -----LAIGSDGNLYSWGANNNGQLGDNTTTQRNTPIRVAAPQNAPTGLTWVQASAGWDN 582

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           +   L S G +Y+WGK   G LG     D+ +P
Sbjct: 583 NSFGLASDGNLYSWGKNANGQLGDNTTNDRHIP 615



 Score = 42.7 bits (99), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 22/170 (12%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
            QI+ G +H L I ++ + ++ G +  G LG G       P+T Q  + T  +        
Sbjct: 1019 QISAGSWHALAIDTDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSL----KAT 1074

Query: 168  QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVE--ALKGVPCKQVTA 224
            Q+SA  +H+  V + G ++  G NS+   G  +T N+   +P  ++  A K    K V +
Sbjct: 1075 QISAGVDHSLVVDRDGSLWAWGWNSNGQLGIGNTVNQ--TKPATIKDPANKAQTFKAVRS 1132

Query: 225  GLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDR---PTPKSIAPLEEV 269
                   L IR  G++   G N +GQLG+  T  R   P P +  P   V
Sbjct: 1133 SAGQLHSLAIRQDGNLWAWGDNQYGQLGNNQTATRNTTPMPVAFDPTPLV 1182


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 496 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 544

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 545 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 604

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 605 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 662

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 663 VTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 722

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 723 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 779

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 780 DQCQ-HFDTLR 789



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 147/325 (45%), Gaps = 19/325 (5%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
           P +   L +L  +Q+      +  +SRN ++    +   +     + +Q +  S +IV+ 
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 541

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHV 166
           +A +      G ++  L +   V+S G    G LGHG   P     V        +  HV
Sbjct: 542 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV 596

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V ++    ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G 
Sbjct: 597 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGS 655

Query: 227 NFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
                L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A
Sbjct: 656 GDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIA 714

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +T +G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     
Sbjct: 715 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSE 772

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEP 369
           V++WG        H D +  T PEP
Sbjct: 773 VHSWGSN--DQCQHFDTLRVTKPEP 795



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 496 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 545

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 546 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 605

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 606 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 662

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           VTD G+++ +GD +  +LG     GC  P    I+++++
Sbjct: 663 VTDNGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 699



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 655 SGDAQTLAVTDNGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 713

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 714 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 772

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++ P  +   +V IA GP+   A
Sbjct: 773 VHSWGSNDQCQ--HFDTLRVTKPEPAAL-PGLDTKHIVGIACGPAQSFA 818


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 24/307 (7%)

Query: 108 ETSAGNQM-QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI 158
           E S G ++ Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    +
Sbjct: 18  ERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNV 77

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
           +         VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+ 
Sbjct: 78  DL--------VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAA 277
             QV+ G   +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AA
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAA 188

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDE 334
           G ++  A++  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDE
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDE 246

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L   G V+T+G    G LG+    +K  P+ +  +   ++   C        +  T
Sbjct: 247 HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTT 306

Query: 395 GSVYGFG 401
           G V  FG
Sbjct: 307 GQVISFG 313


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + ++G+V+T   NS       DT      P+LV+ L      ++ A 
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736

Query: 459 ERAQLGHDTLR 469
           ++ Q   DTLR
Sbjct: 737 DQCQ-HFDTLR 746



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 121/261 (46%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
           + G ++  L +   V+S G    G LGHG       P+     S  +    +  HVV ++
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 557

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 558 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 616

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK I  L+++  VV++  G  + +A+T +
Sbjct: 617 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQFSIALTKD 675

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 676 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 734 GSN--DQCQHFDTLRVTKPEP 752



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V QIA      L ++ NG VY+    S          D L P+ +Q    + I  +   +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
              H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A    V +      
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
           +  +   G +Y +G   +G LG    G S+    P ++  L+   V  ++  +G   T+ 
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           VT+ G+++ +GD +  +LG     GC  P  I
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLI 651



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +G   TL ++ N  V+S G    G LG G  +  C +   I       VV+V      + 
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + GQV++ G   +   GH  T   +  P+L+E L+G     V AG      LT    
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729

Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           VH+ GSN   Q  H DTL   +P P ++  L +   +V IA GP+   A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775


>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
          Length = 1698

 Score =  117 bits (293), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 90/304 (29%), Positives = 144/304 (47%), Gaps = 18/304 (5%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V +S  ++H+AFV + G++F  GDN+    G +    P+ +P  V+ LKG   + V  G 
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQ-IKGPVTKPVCVKVLKGERAQSVACGT 95

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           + T   T +G +   G N+ GQLG G   D  + + + P  +   +  ++AG     A+T
Sbjct: 96  DHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALT 155

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++ +G  S   LG G     L P+ +      G  +  VS G  H   +  SG VY
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELNM----GQSIHWVSCGYRHSALVTDSGDVY 211

Query: 347 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG---FG 401
           ++G+   G LG       + + P+ + SL S L V  C  K    +  D    +G   FG
Sbjct: 212 SFGESADGRLGLSAHQLANHSYPQRVESLHSVLQV-ACGGKHTLALTEDELYCFGGGEFG 270

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
            +G G+L F    V+D    P  +   R   V+ ++ G  H+ ++TD G L+ FGD    
Sbjct: 271 QLGLGTLVF----VADS---PVAVGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRHG 323

Query: 462 QLGH 465
           +LGH
Sbjct: 324 KLGH 327



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 78/261 (29%), Positives = 126/261 (48%), Gaps = 16/261 (6%)

Query: 107 VETSAGNQMQ-ITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSA 163
           V+   G + Q +  G  HTL+  S   + + G +  G LG G      +SF R+  F   
Sbjct: 80  VKVLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLG-HCNDSISFQRLRPFCDY 138

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +  +SA ++ +A + + G++F  GDNS+   G  + +  +  P+  E   G     V+
Sbjct: 139 APIKLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALL-PK--ELNMGQSIHWVS 195

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            G   +  +T  G V++ G +  G+LG       +   P+ +   E + SV+Q+A G  +
Sbjct: 196 CGYRHSALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRV---ESLHSVLQVACGGKH 252

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
            LA+T + + Y FG G    LG G        P A+  FR+    V  V+ G++H   + 
Sbjct: 253 TLALTEDEL-YCFGGGEFGQLGLGTLVFVADSPVAVGHFRKG--RVTHVTCGEQHSALIT 309

Query: 341 SSGYVYTWGKGYCGALGHGDE 361
            SG +YT+G G  G LGHGDE
Sbjct: 310 DSGLLYTFGDGRHGKLGHGDE 330



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 17/220 (7%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L  +  +F  G +  G LG G ++   +    +N   + H   VS    H+A V  SG V
Sbjct: 154 LTEDGRLFLWGDNSAGQLGFGNDSHALLP-KELNMGQSIH--WVSCGYRHSALVTDSGDV 210

Query: 186 FTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           ++ G+++    G   H+  N     P+ VE+L  V   QV  G   T  LT    ++  G
Sbjct: 211 YSFGESADGRLGLSAHQLANHSY--PQRVESLHSV--LQVACGGKHTLALT-EDELYCFG 265

Query: 243 SNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
               GQLG G       +P ++    + G V  +  G  +   +T +G++Y+FG G +  
Sbjct: 266 GGEFGQLGLGTLVFVADSPVAVGHFRK-GRVTHVTCGEQHSALITDSGLLYTFGDGRHGK 324

Query: 302 LGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           LGHG+++  ++  P   Q F      V+ V+ G  H++  
Sbjct: 325 LGHGDENFTNQFTPTVCQRFFEYS--VMTVACGSSHMLVF 362



 Score = 45.8 bits (107), Expect = 0.046,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 2/151 (1%)

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           V +S G  H   +   G ++ +G    G LG   +   T P  +  LK   A  V     
Sbjct: 37  VHISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTD 96

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            T V    G +   G    G LG      +D +   R+        +  +S G + +  +
Sbjct: 97  HTLVSTSQGEILAAGGNSDGQLGLGH--CNDSISFQRLRPFCDYAPIKLLSAGDHTSAAL 154

Query: 447 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T+ GRLF +GDN   QLG       L P E+
Sbjct: 155 TEDGRLFLWGDNSAGQLGFGNDSHALLPKEL 185



 Score = 41.6 bits (96), Expect = 0.98,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 42/105 (40%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 157
           Q   HS      S  + +Q+  G  HTL ++   ++  G    G LG G       S   
Sbjct: 227 QLANHSYPQRVESLHSVLQVACGGKHTLALTEDELYCFGGGEFGQLGLGTLVFVADSPVA 286

Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 202
           +       V  V+  E H+A +  SG ++T GD      GH D N
Sbjct: 287 VGHFRKGRVTHVTCGEQHSALITDSGLLYTFGDGRHGKLGHGDEN 331


>gi|296196030|ref|XP_002745681.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Callithrix
           jacchus]
          Length = 1006

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 126/260 (48%), Gaps = 5/260 (1%)

Query: 209 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKT 74

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVV 327
           +   + ++ G  + LAV   G V+++G+GS   LG GE +     P+ I T    GI ++
Sbjct: 75  LKFNL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTL--TGIKII 131

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQVCARKR 386
           +VS G  H +AL     V++WGK   G LG G E+  +  P+ + SL+     QV A   
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGIPVAQVAAGGA 191

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            +F L   G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 447 TDRGRLFGFGDNERAQLGHD 466
           +  G++F FGDN   QLG++
Sbjct: 252 SQDGKVFTFGDNSSGQLGYN 271



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 133/299 (44%), Gaps = 23/299 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H LL+ +NSSV SCG +  G LG         PE  Q +   + N       
Sbjct: 26  LQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDLPEPVQALKTLKFNL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G  L  + +P+ +  LE +  V Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSLEGI-PVAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G V+T+G    G LG+     K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYNPTPKKRGPQIVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 146/299 (48%), Gaps = 14/299 (4%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSSVHSCGENSRGQLGRRGAPRGDL-PEPVQALKTLKFNLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEINFTPKKITTLTGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI V +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKELSSQASPQRVRSL--EGIPVAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G   ++    P  + +LK+   + +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVF 258

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 456
            FG    G LG+     + K   P+I++ +    VSQI  G  HT+  V   G++  FG
Sbjct: 259 TFGDNSSGQLGY---NPTPKKRGPQIVERIDG-LVSQIDCGGDHTIAYVHTTGQVVSFG 313


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 163/365 (44%), Gaps = 26/365 (7%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           + S +SV + GS   G LG G +  + ++ + ++     +V  V     ++  +   G++
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELA-SVVDALEPFNVRSVVGGSRNSLAICDDGKL 59

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           FT G N     GH    +    P LV++L  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNE 119

Query: 246 HGQLGHGDTLD---RPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           +GQ G   + D   RP  + I   +      +V Q+AAG ++ + +T  G V+++G    
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ--- 176

Query: 300 FCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 354
                        P  I+      R +G+  VR ++ G  H +AL   G ++ WG    G
Sbjct: 177 ----------PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYG 226

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG GD   ++ P P+  L     V + A    +  L + G VYG+G    G LGF D  
Sbjct: 227 QLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+       +P
Sbjct: 287 KSSKML-PQKVNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345

Query: 475 TEIFI 479
            E+ I
Sbjct: 346 LELPI 350


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 157/332 (47%), Gaps = 11/332 (3%)

Query: 116  QITTGRYHTLLISNSSV-FSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 172
            ++  G+  T +I+N+ V  SCG    G LG G   ++ +    + +       +   + S
Sbjct: 784  KVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGS 843

Query: 173  ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            + HA  + ++G+VF+ GD      GH +++R   RPR +EAL+G    QV  G   +  +
Sbjct: 844  DGHAIALTENGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALRGQEVVQVACGFKHSAVV 902

Query: 233  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-GNGVV 291
            TI G + T G   +G+LGHG T ++  P+ +  LE    + Q+A G ++ + V+  N  V
Sbjct: 903  TIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENY-IIGQVACGLNHTVIVSQDNLTV 961

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            ++ G G    LG G    +  P  I+   R GI   ++S G +   AL   G ++ +G+ 
Sbjct: 962  WACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIK--KISCGAQFTAALTWDGKLFMFGQD 1019

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
                           P+ +++L SH  + +      T  L   G VY +G    G LG  
Sbjct: 1020 RMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGL- 1078

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
              G ++ V  P +++SL   ++ QIS G  H+
Sbjct: 1079 --GHTNHVQEPTLVESLSGKNIRQISAGRTHS 1108



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 145/327 (44%), Gaps = 60/327 (18%)

Query: 205  IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
            +  P+L ++      ++V  G N T  +   G V +CG  ++G+LG G++ D      I+
Sbjct: 770  VLVPQLTKSFH--EARKVVCGQNCTFIINNNGVVLSCGEGSYGRLGQGNSDDSNRLTHIS 827

Query: 265  PLEEVGSVVQIAAGPS----YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
             L+  G +V+  A  +    + +A+T NG V+S+G G    LGHG    + +PR I+  R
Sbjct: 828  ALQ--GFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALR 885

Query: 321  RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
              G  VV+V+ G +H   +   G ++T+G G  G LGHG   +K +PE + +L++++  Q
Sbjct: 886  --GQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQ 943

Query: 381  V-CARKRKTFVLVDTGSVYGFGWMGFGSLGF----------------------------- 410
            V C       V  D  +V+  G   +G LG                              
Sbjct: 944  VACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQF 1003

Query: 411  --------------PDRGVSDKVLR------PRILDSLRAHHVSQISTGLYHTVVVTDRG 450
                           DR   +   R      P+++ +L +HH+  IS G  HT+ +T +G
Sbjct: 1004 TAALTWDGKLFMFGQDRMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKG 1063

Query: 451  RLFGFGDNERAQLGHDTLRGCLEPTEI 477
             ++ +G N   QLG        EPT +
Sbjct: 1064 IVYTWGSNTDGQLGLGHTNHVQEPTLV 1090



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 116/246 (47%), Gaps = 17/246 (6%)

Query: 238 VHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           V+  G+  HGQL   G G  +    P+      E   VV    G +    +  NGVV S 
Sbjct: 752 VYLFGAGRHGQLAEVGSGVLV----PQLTKSFHEARKVV---CGQNCTFIINNNGVVLSC 804

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYC 353
           G GS   LG G   D  +   I   +   +  +  S G D H +AL  +G V++WG G  
Sbjct: 805 GEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDY 864

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
           G LGHG+   +  P  + +L+    VQV C  K    V +D G ++ FG+  +G LG   
Sbjct: 865 GKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTID-GKLFTFGYGDYGRLGH-- 921

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRGC 471
              ++K +  R++ +L  + + Q++ GL HTV+V+ D   ++  GD +  +LG       
Sbjct: 922 GSTTNKKIPERVM-ALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSAK 980

Query: 472 LEPTEI 477
             PT+I
Sbjct: 981 TSPTKI 986


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 5/259 (1%)

Query: 209 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVV 327
           +   + ++ G  + LAV   G V+++G+GS   LG GE  +    PR I T    GI ++
Sbjct: 75  LKFDL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL--NGIKII 131

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKR 386
           +VS G  H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A   
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGA 191

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            +F L   G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 447 TDRGRLFGFGDNERAQLGH 465
           +  G++F FGDN   QLG+
Sbjct: 252 SQDGKVFTFGDNSSGQLGY 270



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 23/299 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H LL+ +NS V SCG +  G LG         PE  Q +   + +       
Sbjct: 26  LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F PR +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     +P+P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 143/301 (47%), Gaps = 18/301 (5%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDL-PEPVQALKTLKFDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TP+ I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           LA++ +  V+S+G  S+  LG G++    QP   +    +GI + +V+AG  H  AL   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199

Query: 343 GYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
           G  + WG    G L   G   ++    P  + +LK+   + +      T VL   G V+ 
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFT 259

Query: 400 FGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           FG    G LG+   P++     V R   +D L    VSQI  G  HT+  V   G++  F
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGGDHTIAYVHTTGQVVSF 312

Query: 456 G 456
           G
Sbjct: 313 G 313


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 141/302 (46%), Gaps = 17/302 (5%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           VF  G +  G LG G    + +  +++ F    +V Q++A   H A + ++G V T G N
Sbjct: 41  VFVFGQNSYGELGLGDVQERSIP-SQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFN 99

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTHGQL 249
            S   GH + N+ I  P+ +E+LK +    +++  G      ++  G ++TCG N +GQL
Sbjct: 100 GSGQLGHGN-NKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQL 158

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN--------GVVYSFGSGSNFC 301
           GHG   +  TP  +  L++   V  ++    + L VT +          VYS G   N  
Sbjct: 159 GHGTQSNLSTPTLVQALKDT-QVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQ 217

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LG      E+ P+ I++   +   V++ + G  H V +   G V++ G    G LGH D 
Sbjct: 218 LGQEHTCHEITPKIIRSLNTR--QVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDT 275

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
             +  P  + SLK+   VQ       T V  DTG +Y FG    G LG    G +  +++
Sbjct: 276 KSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQA--LIQ 333

Query: 422 PR 423
           P+
Sbjct: 334 PK 335



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 136/305 (44%), Gaps = 20/305 (6%)

Query: 185 VFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
           VF  G NS    G  D   R I  P  V     +   Q+ AG      LT  G V T G 
Sbjct: 41  VFVFGQNSYGELGLGDVQERSI--PSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98

Query: 244 NTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
           N  GQLGHG+     TPK I  L+ +  + +  A G   +  ++ +G +Y+ G  +   L
Sbjct: 99  NGSGQLGHGNNKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQL 158

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV--------ALDSSGYVYTWGKGYCG 354
           GHG Q +   P  +Q    K   V  VS    H +        A +    VY+ G+   G
Sbjct: 159 GHGTQSNLSTPTLVQAL--KDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNG 216

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            LG      +  P+ + SL +   +Q  C      FV V  G V+  G+   G LG  D 
Sbjct: 217 QLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVH-GEVFSCGFNDNGQLGHNDT 275

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL-RGCL 472
              ++   P +++SL+   + Q + G YHT+V  D G ++ FG N++ QLG +T  +  +
Sbjct: 276 KSRNQ---PVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALI 332

Query: 473 EPTEI 477
           +P +I
Sbjct: 333 QPKQI 337



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 159/370 (42%), Gaps = 37/370 (10%)

Query: 125 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ--- 181
           ++  +  +++CG +  G LGHG ++      T +       V  VS S  H+  V Q   
Sbjct: 140 IISQDGKLYTCGYNNYGQLGHGTQSNLSTP-TLVQALKDTQVTNVSCSYYHSLIVTQDMR 198

Query: 182 --SGQ---VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
             S Q   V++ G N +   G   T   I  P+++ +L      Q   GL+ + F+T+ G
Sbjct: 199 QASNQQTTVYSVGRNDNGQLGQEHTCHEI-TPKIIRSLNTRQVIQTACGLHHSVFVTVHG 257

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V +CG N +GQLGH DT  R  P  I  L+    +VQ A G  + L     G +Y+FG 
Sbjct: 258 EVFSCGFNDNGQLGHNDTKSRNQPVLIESLKN-KFIVQAACGYYHTLVRRDTGEIYAFGR 316

Query: 297 GSNFCLGHGEQHDEL-QPRAIQTF------RRKGIHVVRVSAGDEH----VVALDSSGYV 345
                LG       L QP+ IQ F      +  G +  ++ +G EH      +L  SG +
Sbjct: 317 NDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAI 376

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
                     L   + ++   P+     K     ++      +  L ++G ++ FG    
Sbjct: 377 MQ-------GLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNH 429

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G LG   +G ++    P+ + SL    V  I+ G YHT+V+  + ++ G      +QL  
Sbjct: 430 GQLG---QGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKVKGI-----SQLST 481

Query: 466 DTLRGCLEPT 475
           D  +   EP+
Sbjct: 482 DMKKIINEPS 491


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 8/274 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           FC G   T+    + R  E   G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRR 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  APRGELPEPIQALETL-NVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E+  +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            V  IS G  HT V+   G++F FGDN   QLG+
Sbjct: 237 GVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGY 270



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   + +      T VL+  G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVIS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 138/307 (44%), Gaps = 24/307 (7%)

Query: 108 ETSAGNQM-QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRI 158
           E S G ++ Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    +
Sbjct: 18  ERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNV 77

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
           +         VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+ 
Sbjct: 78  DL--------VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAA 277
             QV+ G   +  L+    V + G N+HGQLG G  +  + +P+ +  LE +  + Q+AA
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGI-PLAQVAA 188

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ---PRAIQTFRRKGIHVVRVSAGDE 334
           G ++  A++  G  + +GS S   L    ++  +Q   P +I   +  G  V+ +S GDE
Sbjct: 189 GGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLG--VIYISCGDE 246

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L   G V+T+G    G LG+    +K  P+ +  +   ++   C        +  T
Sbjct: 247 HTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTT 306

Query: 395 GSVYGFG 401
           G V  FG
Sbjct: 307 GQVISFG 313


>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
           magnipapillata]
          Length = 1020

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 43/351 (12%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS-------SFCCGHRDTNRPIFR-PRLV 211
           F   +  ++VSA   H A V    +++T  +           C G    NR ++R P+ V
Sbjct: 479 FTGGSTAIEVSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHG----NRAMYRTPKRV 534

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRPTPKSIAPLE 267
           +   G+P KQ   G +FT  LT  G V++CGS+ +G LG    +G  +   TP  I  L 
Sbjct: 535 DFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNV--LTPIKIDALS 592

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           ++  VV IA G  +++A+T  G VY++G+G +  LG G Q+D   P+ + T   K  ++V
Sbjct: 593 KL-KVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQNDFNLPQLV-TLPEKYNYIV 650

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI------DK----------TLPEPLS 371
           +++ G ++   L S+G++  +G   C  L     I      DK          TLP P+ 
Sbjct: 651 KITCGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVR 710

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL-RA 430
            L+S+  V + + K  + V+ + G +  FG   FG LG  D    +    P ++  L   
Sbjct: 711 PLRSYRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSRN---FPSLVSGLLNG 767

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIF 478
             V+  + G   TVV T   ++F +G  E  +LG +   G   C  P  IF
Sbjct: 768 KEVTICNCGDNFTVVATADNQIFSWGCGENGRLGLNLSNGITKCCSPKPIF 818



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 140/335 (41%), Gaps = 28/335 (8%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G+ + G L HG          R++F +   + Q    E+    + +SG V++CG +   C
Sbjct: 513 GTEIVGQLCHGNRAMYRTP-KRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYYGC 571

Query: 196 CGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
            G        +  P  ++AL  +    +  G      LT  G V+T G+  HG+LG G+ 
Sbjct: 572 LGCEGIYGSNVLTPIKIDALSKLKVVSIACGDCHVVALTNIGSVYTWGNGEHGRLGLGNQ 631

Query: 255 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL---------GHG 305
            D   P+ +   E+   +V+I  G      +T NG + +FG+     L         G+ 
Sbjct: 632 NDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNGHLLAFGNNECNKLALNQTISFKGNT 691

Query: 306 EQHDELQ-------PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
           ++    Q       P  ++  R     +V +++G  H   +D  G + T+G    G LG 
Sbjct: 692 DKSSTQQKVSYVTLPTPVRPLR--SYRIVSMASGKSHSAVVDEFGRLLTFGSNTFGELGL 749

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           GD   +  P  +S L +   V +C      F +V T     F W G G  G     +S+ 
Sbjct: 750 GDYQSRNFPSLVSGLLNGKEVTIC-NCGDNFTVVATADNQIFSW-GCGENGRLGLNLSNG 807

Query: 419 VLR---PR-ILDSLRAHHVSQISTGLYHTVVVTDR 449
           + +   P+ I  SL  H V  ++   + T+++ +R
Sbjct: 808 ITKCCSPKPIFGSL--HKVVSMAARSWSTIILAER 840



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 129/305 (42%), Gaps = 36/305 (11%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 173
           Q   G   T++++ S  V+SCGS   G LG  G   +  ++  +I+  S   VV ++  +
Sbjct: 544 QAVCGEDFTIILTESGDVYSCGSDYYGCLGCEGIYGSNVLTPIKIDALSKLKVVSIACGD 603

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-----QVTAGLNF 228
            H   +   G V+T G+      G  + N     P+LV     +P K     ++T G + 
Sbjct: 604 CHVVALTNIGSVYTWGNGEHGRLGLGNQN-DFNLPQLV----TLPEKYNYIVKITCGRDN 658

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTL------DRPT----------PKSIAPLEEVGSV 272
           T  LT  GH+   G+N   +L    T+      D+ +          P  + PL     +
Sbjct: 659 TFILTSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSY-RI 717

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
           V +A+G S+   V   G + +FGS +   LG G+      P  +      G  V   + G
Sbjct: 718 VSMASGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSRNFPSLVSGLLN-GKEVTICNCG 776

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHG--DEIDKTL-PEPL-SSLKSHLAVQVCARKRKT 388
           D   V   +   +++WG G  G LG    + I K   P+P+  SL  H  V + AR   T
Sbjct: 777 DNFTVVATADNQIFSWGCGENGRLGLNLSNGITKCCSPKPIFGSL--HKVVSMAARSWST 834

Query: 389 FVLVD 393
            +L +
Sbjct: 835 IILAE 839


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 146/323 (45%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q+   + H A V + G+VFT G++S    GH    +   RP LVE+L       V  G
Sbjct: 263 VHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGH-GFEKDFGRPHLVESLAITNVTFVACG 321

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              +  ++  G + T G  THG   LGHG  +    PK ++ PLE +  VV +A G  + 
Sbjct: 322 EYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGL-QVVAVACGTWHS 380

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA---- 338
              T NG +++FG G    LGHG +     P+ +Q     G   ++V+ G  H  A    
Sbjct: 381 ALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLL--SGYKAIKVACGVWHSAAIIDV 438

Query: 339 LDSSG------YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           +D SG       ++TWG G    LGH ++     P  ++++  +   QV      T  L 
Sbjct: 439 MDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACGYTMTVALT 498

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G   +G LG P+   SD  +   + D L    V +IS G  H  V+T R  L
Sbjct: 499 ASGHVFSMGGTTYGQLGNPN---SDGKVPILVRDKLVGEFVEEISCGANHVAVLTSRSEL 555

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH        PT
Sbjct: 556 YTWGRGANGRLGHGDTDDKKSPT 578



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 21/273 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YH+  +S S  +F+ G      G+LGHG + +  +   R++ P     VV V+  
Sbjct: 318 VACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIP-KRVSGPLEGLQVVAVACG 376

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP-IFRPRLVEALKGVPCKQVTAG------ 225
             H+A    +G++FT GD      GH   NR  +  P+ V+ L G    +V  G      
Sbjct: 377 TWHSALATSNGKLFTFGDGRFGVLGH--GNRASVAYPKEVQLLSGYKAIKVACGVWHSAA 434

Query: 226 ----LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
               ++ +G       + T G     +LGH +      P  +A + E  +  Q+A G + 
Sbjct: 435 IIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCVAAVAEY-NFHQVACGYTM 493

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            +A+T +G V+S G  +   LG+    D   P  ++  +  G  V  +S G  HV  L S
Sbjct: 494 TVALTASGHVFSMGGTTYGQLGN-PNSDGKVPILVRD-KLVGEFVEEISCGANHVAVLTS 551

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
              +YTWG+G  G LGHGD  DK  P  + +LK
Sbjct: 552 RSELYTWGRGANGRLGHGDTDDKKSPTLVEALK 584



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 13/276 (4%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  P+ +E+   +   Q+  G      +T +G V T G ++ G+LGHG   D   P  + 
Sbjct: 249 VLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVE 308

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  + +V  +A G  +  AV+ +G ++++G G++    LGHG       P+ + +   +
Sbjct: 309 SLA-ITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRV-SGPLE 366

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ VV V+ G  H     S+G ++T+G G  G LGHG+      P+ +  L  + A++V 
Sbjct: 367 GLQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVA 426

Query: 383 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
                +  ++D   + G        F W G G          +  L P  + ++  ++  
Sbjct: 427 CGVWHSAAIIDVMDLSGSKASAKRLFTW-GDGDQYRLGHANKETYLEPTCVAAVAEYNFH 485

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
           Q++ G   TV +T  G +F  G     QLG+    G
Sbjct: 486 QVACGYTMTVALTASGHVFSMGGTTYGQLGNPNSDG 521



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 28/235 (11%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G +H+ L  SN  +F+ G    GVLGHG   +  V++ + +   S    ++V+  
Sbjct: 371 VAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRAS--VAYPKEVQLLSGYKAIKVACG 428

Query: 173 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             H+A ++           + ++FT GD   +  GH +       P  V A+      QV
Sbjct: 429 VWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHAN-KETYLEPTCVAAVAEYNFHQV 487

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL----EEVGSVVQ-IAA 277
             G   T  LT  GHV + G  T+GQLG+      P      P+    + VG  V+ I+ 
Sbjct: 488 ACGYTMTVALTASGHVFSMGGTTYGQLGN------PNSDGKVPILVRDKLVGEFVEEISC 541

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
           G +++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  HV  +S G
Sbjct: 542 GANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVEALKDR--HVKNISCG 594



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 8/172 (4%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L P+ +++     +H  ++  GD H+  +   G V+TWG+   G LGHG E D   P 
Sbjct: 248 DVLTPKPLESDVVLDVH--QIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPH 305

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSV--YGFGWMGFGSLGFPDRGVSDKVLRP-RIL 425
            + SL       V   +  +  +  +G +  +G G  G G LG    G       P R+ 
Sbjct: 306 LVESLAITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLG---HGTDVSYWIPKRVS 362

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             L    V  ++ G +H+ + T  G+LF FGD     LGH        P E+
Sbjct: 363 GPLEGLQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEV 414



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 25/187 (13%)

Query: 99  SVEHSSDIVETSAGNQMQITTGRYHTLLI-----------SNSSVFSCGSSLCGVLGHGP 147
           SV +  ++   S    +++  G +H+  I           S   +F+ G      LGH  
Sbjct: 407 SVAYPKEVQLLSGYKAIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHAN 466

Query: 148 ETT----QCVS-FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 202
           + T     CV+     NF       QV+        +  SG VF+ G  +    G+ +++
Sbjct: 467 KETYLEPTCVAAVAEYNFH------QVACGYTMTVALTASGHVFSMGGTTYGQLGNPNSD 520

Query: 203 RPIFRPRLV-EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
             +  P LV + L G   ++++ G N    LT R  ++T G   +G+LGHGDT D+ +P 
Sbjct: 521 GKV--PILVRDKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPT 578

Query: 262 SIAPLEE 268
            +  L++
Sbjct: 579 LVEALKD 585



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 3/127 (2%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N  Q+  G   T+ ++ S  VFS G +  G LG+ P +   V     +      V ++S 
Sbjct: 483 NFHQVACGYTMTVALTASGHVFSMGGTTYGQLGN-PNSDGKVPILVRDKLVGEFVEEISC 541

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             NH A +    +++T G  ++   GH DT+     P LVEALK    K ++ G  FT  
Sbjct: 542 GANHVAVLTSRSELYTWGRGANGRLGHGDTDDKK-SPTLVEALKDRHVKNISCGSTFTSC 600

Query: 232 LTIRGHV 238
           + +   V
Sbjct: 601 ICLHKWV 607


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 144/323 (44%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 262 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 320

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 321 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 379

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 380 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 437

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SS  ++TWG G    LGHG++    LP  +SSL  +   ++      T  L 
Sbjct: 438 MGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALT 497

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G    G LG     +SD  L   + D L    V +I+ G +H  V+T R  +
Sbjct: 498 TSGHVFTMGGTAHGQLG---NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEV 554

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           F +G     +LGH        PT
Sbjct: 555 FTWGKGANGRLGHGDTEDKRTPT 577



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 317 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 375

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 231
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 376 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 434

Query: 232 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 435 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 493

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ G  HV  L S 
Sbjct: 494 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGAHHVAVLTSR 551

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 552 SEVFTWGKGANGRLGHGDTEDKRTPTLVEALR 583



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 13/300 (4%)

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           G+V+T G        +      +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 226 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 285

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 301
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 286 EEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 344

Query: 302 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 345 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 403

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT--------GSVYGFGWMGFGSLGFPD 412
               + P+ + SL     V+V      T  +V+          S   F W G G      
Sbjct: 404 RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTW-GDGDKNRLG 462

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            G  +  L P  + SL  ++  +I+ G   TV +T  G +F  G     QLG+    G L
Sbjct: 463 HGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL 522



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 141/345 (40%), Gaps = 36/345 (10%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 264 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 316

Query: 168 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 317 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 375

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              +   T  G + T G    G LGHG+      PK +  L  +   V++A    +  A+
Sbjct: 376 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGL-KTVKVACSIWHTAAI 434

Query: 286 T----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
                       +  ++++G G    LGHG +   L P  + +      H  +++ G   
Sbjct: 435 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTF 492

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDT 394
            VAL +SG+V+T G    G LG+    D  LP  +   L      ++        VL   
Sbjct: 493 TVALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSR 551

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
             V+ +G    G LG  D    DK   P ++++LR  HV  +S G
Sbjct: 552 SEVFTWGKGANGRLGHGD--TEDKRT-PTLVEALRDRHVKSLSCG 593



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 370 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 427

Query: 173 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 428 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 486

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 281
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 487 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGAHH 544

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 545 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR--HVKSLSCGSN----FTS 598

Query: 342 SGYVYTWGKG 351
           S  ++ W  G
Sbjct: 599 SICIHKWVSG 608



 Score = 45.1 bits (105), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 28/185 (15%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT- 150
           + ++   S+ H++ IVE       Q  T       +S+  +F+ G      LGHG + T 
Sbjct: 420 KTVKVACSIWHTAAIVEVMG----QTATS------MSSRKLFTWGDGDKNRLGHGNKETY 469

Query: 151 ---QCVS-FTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 204
               CVS     NF   A  H   V+        +  SG VFT G  +    G+  ++  
Sbjct: 470 LLPTCVSSLIDYNFHKIACGHTFTVA--------LTTSGHVFTMGGTAHGQLGNSISDGK 521

Query: 205 IFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           +  P LV+  L G   +++  G +    LT R  V T G   +G+LGHGDT D+ TP  +
Sbjct: 522 L--PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLV 579

Query: 264 APLEE 268
             L +
Sbjct: 580 EALRD 584


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 122/241 (50%), Gaps = 8/241 (3%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VYSFGS 296
           V + G    GQLGHGDT DR  P  ++  +    +V +  G  Y +A + +G  VYS+G 
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ-DIVSVTCGADYTVARSKSGKDVYSWGW 183

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           G    LGHG+  D   P  I+    +G+ + ++S GD H +A+     V +WG+   G L
Sbjct: 184 GDFGRLGHGDPSDLFIPHPIRAL--QGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 241

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           G G   D  +P+ + + +      V A    +  + + G +YG+GW  +G+LG  D   +
Sbjct: 242 GLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGD--TN 299

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
           D+++  ++  ++    +  +S G  HT+ ++  G L+  G ++  QLGH     CL P +
Sbjct: 300 DRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRK 357

Query: 477 I 477
           +
Sbjct: 358 V 358



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 128/256 (50%), Gaps = 7/256 (2%)

Query: 127 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ-V 185
           +S + V S G    G LGHG +T   +  T+++      +V V+   ++     +SG+ V
Sbjct: 120 VSGNVVCSWGRGEDGQLGHG-DTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDV 178

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           ++ G       GH D +  +F P  + AL+G+  KQ++ G      +T+   V + G N 
Sbjct: 179 YSWGWGDFGRLGHGDPS-DLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQ 237

Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           +G+LG G T D   P+ I   E +  +  +AAG  + +A+T +G +Y +G G    LG G
Sbjct: 238 NGELGLGTTKDSHVPQKILAFEGI-RIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLG 296

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           + +D L P  +      G  +V VS G  H +++ SSG +YT G    G LGHGD  D  
Sbjct: 297 DTNDRLIPEKVNI---DGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCL 353

Query: 366 LPEPLSSLKSHLAVQV 381
           +P  + +L   L  QV
Sbjct: 354 VPRKVQALSDKLISQV 369



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 131/302 (43%), Gaps = 37/302 (12%)

Query: 205 IFRPRLVEALKGVPCKQVTA-GLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKS 262
           I  P L E+ +   C +V A  +NF  F+  R G+V     +     G G     P+ ++
Sbjct: 20  ISTPLLPESWR--LCSKVNASAVNFRSFVVERVGNVVYVAFSGFQMAGGGSD---PSWRT 74

Query: 263 IAPLEEVGSV--------------VQIAAGPSYMLA---------VTGNGVVYSFGSGSN 299
           + PLE +G V              V++ +G   + +         V+GN VV S+G G +
Sbjct: 75  LEPLESIGGVPLFSTRRNKEEEEPVKVHSGMLNLFSSLFNSIQNQVSGN-VVCSWGRGED 133

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGH 358
             LGHG+  D L P  +  F   G  +V V+ G ++ VA   SG  VY+WG G  G LGH
Sbjct: 134 GQLGHGDTDDRLLPTKLSAF--DGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGH 191

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           GD  D  +P P+ +L+     Q+         +     V  +G    G LG    G +  
Sbjct: 192 GDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGL---GTTKD 248

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
              P+ + +     +  ++ G  H+V +T+ G L+G+G      LG       L P ++ 
Sbjct: 249 SHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVN 308

Query: 479 IQ 480
           I 
Sbjct: 309 ID 310



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 4/142 (2%)

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS-VYG 399
           S   V +WG+G  G LGHGD  D+ LP  LS+      V V      T     +G  VY 
Sbjct: 121 SGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYS 180

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +GW  FG LG  D      +  P  + +L+   + QIS G  H + VT   ++  +G N+
Sbjct: 181 WGWGDFGRLGHGD---PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQ 237

Query: 460 RAQLGHDTLRGCLEPTEIFIQE 481
             +LG  T +    P +I   E
Sbjct: 238 NGELGLGTTKDSHVPQKILAFE 259


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 148/322 (45%), Gaps = 20/322 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 341
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAIVEV 433

Query: 342 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                    S  +YTWG G    LGHGD+  + +P+ + +L  +   Q+      T  L 
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFHQLACGHNMTVALA 493

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G    G LG P    SD      + D L +  V +IS G  H  V+T R  +
Sbjct: 494 TSGRVFTMGSSSNGQLGNPK---SDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEV 550

Query: 453 FGFGDNERAQLGHDTLRGCLEP 474
           + +G     +LGH  L+   +P
Sbjct: 551 YTWGMGANGRLGHGDLKDRKKP 572



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 226
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 227 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
               N TG   +   ++T G     +LGHGD   R  PK +  L E     Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-DFHQLACGHNMT 489

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 147/354 (41%), Gaps = 40/354 (11%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 222
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G   +   T  G ++T G  T G LGHGD      PK +  L      +++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF-KTIKVACGIWHS 427

Query: 283 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYDFH--QLACG 485

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
               VAL +SG V+T G    G LG+     K        L S L  ++        VL 
Sbjct: 486 HNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT 545

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
               VY +G    G LG  D  + D+  +P ++++L+  HV  IS G   T  +
Sbjct: 546 SRSEVYTWGMGANGRLGHGD--LKDRK-KPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 16/293 (5%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L     ++V 
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVA 421

Query: 383 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
                +  +V+  +  G        + W G G       G  +  L P+ + +L  +   
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTW-GDGDKNRLGHGDKEPRLVPKCVQALLEYDFH 480

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 484
           Q++ G   TV +   GR+F  G +   QLG+   D  + CL    +  + +EE
Sbjct: 481 QLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  Y+       V  S G  S+ C     + D L P+ +++     + V +++ G  HV 
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSC----SKVDVLIPKPLES--DVVLDVNQIACGTRHVA 269

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
                G V+TWG+ + G LGHG + D + P+ + SL   +   +   +  T  +  +G +
Sbjct: 270 LTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDL 329

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           + +G  G  ++G    G       P ++   L    V  ++ G +H+ + T  G+L+ FG
Sbjct: 330 FNWG-DGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 457 DNERAQLGHDTLRGCLEPTEI 477
           D     LGH        P E+
Sbjct: 389 DGTFGVLGHGDRETLAYPKEV 409


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 166/400 (41%), Gaps = 55/400 (13%)

Query: 116 QITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           ++  G YHTL++        +F  G +   VLG G E  + V    + F S     +VS 
Sbjct: 50  RVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSC 109

Query: 172 SENHAAFVLQ-----SGQVFT-------------------CGDNSSFCCGHRDTNRPIFR 207
             N++A +++      G+V+T                    G    F    ++     F 
Sbjct: 110 GTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFT 169

Query: 208 PRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           P+         CK  +++ G + T  L+  G ++  G  ++G LG GDT D  TP  +  
Sbjct: 170 PKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYL 229

Query: 266 LEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
             E GS                  V   +AG  + +A T +G ++++G G N  LG G  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
              L P  +     + I  V V+AGD H   +D  G +YTWG G  G LGHGD+ +  +P
Sbjct: 290 RGSLSPAVVDYILDRDI--VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF--PDRGVSDKVLRPRIL 425
             +        +QV      T  L   G+V  F W    +LGF   + G    V  P+ L
Sbjct: 348 RKVEGFGGVPVLQVACGTFHTLALTHKGTV--FAWGAGLALGFGEGEDGSGGMVAVPKHL 405

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             + A  V  I+ G YH+  VT  G L  +G    ++LGH
Sbjct: 406 SDIEA-AVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGH 444



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 172/422 (40%), Gaps = 67/422 (15%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 165
           +I+ G  HTL +S+  ++++ G    G LG G +T+   +  R+   S A          
Sbjct: 185 RISCGADHTLALSDEGALYAWGVGSYGNLGQG-DTSDSYTPVRVYLGSEAGSGKKKENVG 243

Query: 166 ----------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEA 213
                     V   SA   H+      G ++T G   N     GH   NR    P +V+ 
Sbjct: 244 VGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH---NRGSLSPAVVDY 300

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           +       V AG + +  +  +G ++T GS   G+LGHGD  + P P+ +     V  V+
Sbjct: 301 ILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGV-PVL 359

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
           Q+A G  + LA+T  G V+++G+G     G GE          +        V+ ++AG 
Sbjct: 360 QVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGP 419

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-------VCARKR 386
            H  A+   G +  WG G    LGHGD+ ++  P+ ++ L++ + V        V   KR
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKR 479

Query: 387 K-------------------------------TFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           +                               T  L   G+V+ +G    G LG  +  V
Sbjct: 480 EYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGED-V 538

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
            +    P  L+   +  + +I+ G  H + V   G +F +G N+  QLG   +R   EP 
Sbjct: 539 EEDQYEPVKLECF-STPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPA 597

Query: 476 EI 477
            +
Sbjct: 598 AV 599



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 163/432 (37%), Gaps = 78/432 (18%)

Query: 117 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H+  I    V ++ GS   G LGHG +    V      F     V+QV+    H
Sbjct: 309 VNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGF-GGVPVLQVACGTFH 367

Query: 176 AAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
              +   G VF  G   +  F  G   +   +  P+ +  ++      + AG   +  +T
Sbjct: 368 TLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAA-VLNIAAGPYHSAAVT 426

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--------------------------- 266
           + G +   G     +LGHGD  ++P PK +A L                           
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 267 ----------EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPR 314
                     +   ++  +  G S+ +A+TG G V+ +GS  +  LG GE  + D+ +P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            ++ F      + R++ G +H +A+   G V+ WG    G LG G       P  +++L+
Sbjct: 547 KLECFS---TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR 603

Query: 375 SHLAV------QVC------ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
             + V        C      A+        + G ++ +G    G LG  +   S  +L P
Sbjct: 604 QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTP 663

Query: 423 RI-----------LDSLRAH--------HVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
           +            LDSL             S + +G  H++ +T +G  + +G     +L
Sbjct: 664 QKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRL 723

Query: 464 GHDTLRGCLEPT 475
           G  T      PT
Sbjct: 724 GIGTTANAYTPT 735



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 122/333 (36%), Gaps = 54/333 (16%)

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           E+H   +  +G V+  G N     G   D     + P  +E     P +++  G      
Sbjct: 509 ESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCLA 567

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG---- 287
           +   G V   G+N +GQLG G       P ++  L +    V +  G  Y   +T     
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA---VDVFCGDDYSACITSLGGA 624

Query: 288 ----------NGVVYSFGSGSNFCLGHGEQHDE---LQPRAI----------------QT 318
                      G ++++G+  +  LG GE       L P+ +                Q 
Sbjct: 625 QSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQA 684

Query: 319 FRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           ++R  +  V  S   +G  H +A+ + G  Y WG GY G LG G   +   P      K 
Sbjct: 685 YKR--VFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKG 742

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH---- 431
                V A    +  L   G ++ +G          D   +   + PRI   L       
Sbjct: 743 VRLRSVAAGACHSLALSMDGDLWFWGRR-------EDTCSTTNYMSPRIFMQLEGQGGVP 795

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            V  IS    H++ VT+ G +F +GDN+  Q G
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTG 828



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 122/339 (35%), Gaps = 85/339 (25%)

Query: 151 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSG---QVFTCGDNSSFCCGHRDTNRPIFR 207
           Q V+  RI     A V +V+    H   V   G   Q+F  G N S   G     R    
Sbjct: 33  QEVAANRIARFGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVF 92

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKS 262
           P LV     +   +V+ G N +  L  R     G V+T G    G+LG+        PK+
Sbjct: 93  PGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGY--------PKN 144

Query: 263 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFR 320
            A                       +GV    G   +F  G G++       P+  +   
Sbjct: 145 KA-----------------------DGVA---GYQGDFS-GDGQEDGPSWFTPKPSRVRF 177

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
           R    + R+S G +H +AL   G +Y WG G  G LG GD  D   P     ++ +L  +
Sbjct: 178 RDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP-----VRVYLGSE 232

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
             + K+K  V                       GV      P +        V+  S G 
Sbjct: 233 AGSGKKKENV-----------------------GVGKVRADPVV--------VTCCSAGA 261

Query: 441 YHTVVVTDRGRL--FGFGDNERAQLGHDTLRGCLEPTEI 477
            H++  T  G L  +G G N R  LGH+  RG L P  +
Sbjct: 262 KHSMACTSDGTLWTWGHGGNGRLGLGHN--RGSLSPAVV 298



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 10/182 (5%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +T +G  +  G+  +G+LG G T +  TP      + V  +  +AAG  + LA++ +G +
Sbjct: 706 ITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV-RLRSVAAGACHSLALSMDGDL 764

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG--IHVVRVSAGDEHVVALDSSGYVYTWG 349
           + +G   + C       + + PR       +G    V  +SA + H +A+  +G V+ WG
Sbjct: 765 WFWGRREDTC----STTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWG 820

Query: 350 KGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
                  G G    + L  PE ++ L S     V    + +F ++ +G V+  G +  G 
Sbjct: 821 DNKLYQTGCGKRQAERLDRPERVAGLPSACQ-WVATGPQGSFFILASGEVFAAGVIKSGR 879

Query: 408 LG 409
           LG
Sbjct: 880 LG 881



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQV 222
            V  +SASE H+  V ++G+VF  GDN  +   CG R   R + RP  V  L    C+ V
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER-LDRPERVAGLPSA-CQWV 853

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 252
             G   + F+   G V   G    G+LG G
Sbjct: 854 ATGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 70/185 (37%), Gaps = 34/185 (18%)

Query: 326 VVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 381
           V RV+ G  H + +   G    ++ WGK Y   LG G EI ++  P  +         +V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 382 CARKRKTFVLVDT-----GSVYGFGWMGFGSLGFPDR---------------GVSD---- 417
                 + VLV       G VY FG    G LG+P                 G  D    
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSW 167

Query: 418 ---KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
              K  R R  D  +   +++IS G  HT+ ++D G L+ +G      LG         P
Sbjct: 168 FTPKPSRVRFRDKCK---IARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP 224

Query: 475 TEIFI 479
             +++
Sbjct: 225 VRVYL 229


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 228

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 325
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 229 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 285

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 384
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 286 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 345

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 346 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 405

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRG 470
           V+T+ G++F FG +   QL H    G
Sbjct: 406 VLTEDGQVFTFGGSSSEQLQHSPRSG 431



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 172
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 182 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 239

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299

Query: 233 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 358

Query: 292 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 416

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 417 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 469



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 14/306 (4%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 172 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 230

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 275
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 231 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 289

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 334
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 290 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 347

Query: 335 HVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           H  AL   G  + WG    G L   G+  +     P  + +LK+   V +      T VL
Sbjct: 348 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 407

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 450
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 408 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 463

Query: 451 RLFGFG 456
           ++   G
Sbjct: 464 QVVSLG 469



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 174 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 347 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 406

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 273
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 407 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 466

Query: 274 QIAAGPS 280
            +  GPS
Sbjct: 467 SLGRGPS 473


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 5/266 (1%)

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           +PR +EA  G+   +  +G   +  L     V++CG N+ GQLG         P+ I  L
Sbjct: 169 QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 228

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIH 325
             V  +  ++ G  + +AV   G V+++G+GS   LG GE  +    P  I +    GI 
Sbjct: 229 STV-HIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL--AGIK 285

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCAR 384
           +++VS G  H +AL   G V++WG    G LG G+ +  +  P+ + SL+     QV A 
Sbjct: 286 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 345

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              +F L   G+ +G+G    G L        +++ +P  + +L+  +V  IS G  HT 
Sbjct: 346 GTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTS 405

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRG 470
           V+T+ G++F FG +   QL H    G
Sbjct: 406 VLTEDGQVFTFGGSSSEQLQHSPRSG 431



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 11/293 (3%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-GPETTQCVSFTRINFPSAAHVVQVSAS 172
           ++  +G  H+LL+ SN  V+SCG +  G LG   P++T+      I   S  H+  VS  
Sbjct: 182 LKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTK--RPEPIQALSTVHIDLVSCG 239

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           + H+  V   G+VFT G  S    G  ++    F P  + +L G+   QV+ G   +  L
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 299

Query: 233 TIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +  G V + GSN  GQLG G+ L  + +P+ +  LE +  + Q+AAG ++  A++  G  
Sbjct: 300 SEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI-PLAQVAAGGTHSFALSLMGTS 358

Query: 292 YSFG---SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           + +G   SG     G+  +    +P +I     K ++VV +S G EH   L   G V+T+
Sbjct: 359 FGWGNNRSGQLALSGNSAKEQIYKPHSIGAL--KTLNVVYISCGYEHTSVLTEDGQVFTF 416

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G      L H     +  P+ +  +  H++   C        +  TG V   G
Sbjct: 417 GGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG 469



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 14/306 (4%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           R+   +   +++ ++ E H+  +  + +V++CGDNS    G + + +   RP  ++AL  
Sbjct: 172 RLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQK-SPQSTKRPEPIQALST 230

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 275
           V    V+ G   +  +  +G V T G+ + GQLG G++ +    P  I  L  +  ++Q+
Sbjct: 231 VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGI-KIIQV 289

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDE 334
           + G  + LA++ +G V+S+GS     LG G     +  P+ +++   +GI + +V+AG  
Sbjct: 290 SCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL--EGIPLAQVAAGGT 347

Query: 335 HVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           H  AL   G  + WG    G L   G+  +     P  + +LK+   V +      T VL
Sbjct: 348 HSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVL 407

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRG 450
            + G V+ FG      L    R        P++++ +   HVSQI  G YHT+  V   G
Sbjct: 408 TEDGQVFTFGGSSSEQLQHSPRSGRGG---PQLIEGI-GGHVSQIECGSYHTIAYVYTTG 463

Query: 451 RLFGFG 456
           ++   G
Sbjct: 464 QVVSLG 469



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q++ G YH+L +S +  VFS GS+  G LG G       S  ++       + QV+A  
Sbjct: 287 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 346

Query: 174 NHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H+  +   G  F  G+N S             I++P  + ALK +    ++ G   T  
Sbjct: 347 THSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSV 406

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPK------------------SIAPLEEVGSVV 273
           LT  G V T G ++  QL H     R  P+                  +IA +   G VV
Sbjct: 407 LTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGHVSQIECGSYHTIAYVYTTGQVV 466

Query: 274 QIAAGPS 280
            +  GPS
Sbjct: 467 SLGRGPS 473


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 5/259 (1%)

Query: 209 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
           R  E   G    Q  +G      L     VH+CG N+ GQLG         P+ +  L+ 
Sbjct: 15  RRTEGSPGAELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKT 74

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVV 327
           +   + ++ G  + LAV   G V+++G+GS   LG GE  +    PR I T    GI ++
Sbjct: 75  LKFDL-VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTL--NGIKII 131

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKR 386
           +VS G  H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A   
Sbjct: 132 QVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGA 191

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            +F L   G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+
Sbjct: 192 HSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVL 251

Query: 447 TDRGRLFGFGDNERAQLGH 465
           +  G++F FGDN   QLG+
Sbjct: 252 SQDGKVFTFGDNSSGQLGY 270



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 23/299 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H LL+ +NS V SCG +  G LG         PE  Q +   + +       
Sbjct: 26  LQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F PR +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     +P+P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +  G  + +GS S   L   G   Q    +P +I   +  G  V+ +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLG--VIYISCGDEHTAVLSQD 254

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 143/301 (47%), Gaps = 18/301 (5%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E HA  +L +  V +CG+NS    G R   R    P  V+ALK +    V+
Sbjct: 23  AELLQAASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDL-PEPVQALKTLKFDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TP+ I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           LA++ +  V+S+G  S+  LG G++    QP   +    +GI + +V+AG  H  AL   
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPS-QPSPQRVRSLEGIPLAQVAAGGAHSFALSLC 199

Query: 343 GYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
           G  + WG    G L   G   ++    P  + +LK+   + +      T VL   G V+ 
Sbjct: 200 GTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFT 259

Query: 400 FGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
           FG    G LG+   P++     V R   +D L    VSQI  G  HT+  V   G++  F
Sbjct: 260 FGDNSSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGGDHTIAYVHTTGQVVSF 312

Query: 456 G 456
           G
Sbjct: 313 G 313


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 166/400 (41%), Gaps = 55/400 (13%)

Query: 116 QITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           ++  G YHTL++        +F  G +   VLG G E  + V    + F S     +VS 
Sbjct: 50  RVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSC 109

Query: 172 SENHAAFVLQ-----SGQVFT-------------------CGDNSSFCCGHRDTNRPIFR 207
             N++A +++      G+V+T                    G    F    ++     F 
Sbjct: 110 GTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFT 169

Query: 208 PRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           P+         CK  +++ G + T  L+  G ++  G  ++G LG GDT D  TP  +  
Sbjct: 170 PKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYL 229

Query: 266 LEEVGS------------------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
             E GS                  V   +AG  + +A T +G ++++G G N  LG G  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
              L P  +     + I  V V+AGD H   +D  G +YTWG G  G LGHGD+ +  +P
Sbjct: 290 RGSLSPAVVDYILDRDI--VFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVP 347

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF--PDRGVSDKVLRPRIL 425
             +        +QV      T  L   G+V  F W    +LGF   + G    V  P+ L
Sbjct: 348 RKVEGFGGVPVLQVACGTFHTLALTHKGTV--FAWGAGLALGFGEGEDGSGGMVAVPKHL 405

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             + A  V  I+ G YH+  VT  G L  +G    ++LGH
Sbjct: 406 SDIEA-AVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGH 444



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 172/422 (40%), Gaps = 67/422 (15%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 165
           +I+ G  HTL +S+  ++++ G    G LG G +T+   +  R+   S A          
Sbjct: 185 RISCGADHTLALSDEGALYAWGVGSYGNLGQG-DTSDSYTPVRVYLGSEAGSGKKKENVG 243

Query: 166 ----------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEA 213
                     V   SA   H+      G ++T G   N     GH   NR    P +V+ 
Sbjct: 244 VGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH---NRGSLSPAVVDY 300

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           +       V AG + +  +  +G ++T GS   G+LGHGD  + P P+ +     V  V+
Sbjct: 301 ILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGV-PVL 359

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
           Q+A G  + LA+T  G V+++G+G     G GE          +        V+ ++AG 
Sbjct: 360 QVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLNIAAGP 419

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-------VCARKR 386
            H  A+   G +  WG G    LGHGD+ ++  P+ ++ L++ + V        V   KR
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKR 479

Query: 387 K-------------------------------TFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           +                               T  L   G+V+ +G    G LG  +  V
Sbjct: 480 EYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGED-V 538

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
            +    P  L+   +  + +I+ G  H + V   G +F +G N+  QLG   +R   EP 
Sbjct: 539 EEDQYEPVKLECF-STPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPA 597

Query: 476 EI 477
            +
Sbjct: 598 AV 599



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 163/432 (37%), Gaps = 78/432 (18%)

Query: 117 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H+  I    V ++ GS   G LGHG +    V      F     V+QV+    H
Sbjct: 309 VNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGF-GGVPVLQVACGTFH 367

Query: 176 AAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
              +   G VF  G   +  F  G   +   +  P+ +  ++      + AG   +  +T
Sbjct: 368 TLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAA-VLNIAAGPYHSAAVT 426

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--------------------------- 266
           + G +   G     +LGHGD  ++P PK +A L                           
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 267 ----------EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPR 314
                     +   ++  +  G S+ +A+TG G V+ +GS  +  LG GE  + D+ +P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            ++ F      + R++ G +H +A+   G V+ WG    G LG G       P  +++L+
Sbjct: 547 KLECFS---TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR 603

Query: 375 SHLAV------QVC------ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
             + V        C      A+        + G ++ +G    G LG  +   S  +L P
Sbjct: 604 QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTP 663

Query: 423 RI-----------LDSLRAH--------HVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
           +            LDSL             S + +G  H++ +T +G  + +G     +L
Sbjct: 664 QKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRL 723

Query: 464 GHDTLRGCLEPT 475
           G  T      PT
Sbjct: 724 GIGTTANAYTPT 735



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 122/333 (36%), Gaps = 54/333 (16%)

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           E+H   +  +G V+  G N     G   D     + P  +E     P +++  G      
Sbjct: 509 ESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCLA 567

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG---- 287
           +   G V   G+N +GQLG G       P ++  L +    V +  G  Y   +T     
Sbjct: 568 VAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA---VDVFCGDDYSACITSLGGA 624

Query: 288 ----------NGVVYSFGSGSNFCLGHGEQHDE---LQPRAI----------------QT 318
                      G ++++G+  +  LG GE       L P+ +                Q 
Sbjct: 625 QSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQA 684

Query: 319 FRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
           ++R  +  V  S   +G  H +A+ + G  Y WG GY G LG G   +   P      K 
Sbjct: 685 YKR--VFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKG 742

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH---- 431
                V A    +  L   G ++ +G          D   +   + PRI   L       
Sbjct: 743 VRLRSVAAGACHSLALSMDGDLWFWGRR-------EDTCSTTNYMSPRIFMQLEGQGGVP 795

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            V  IS    H++ VT+ G +F +GDN+  Q G
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTG 828



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 122/339 (35%), Gaps = 85/339 (25%)

Query: 151 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSG---QVFTCGDNSSFCCGHRDTNRPIFR 207
           Q V+  RI     A V +V+    H   V   G   Q+F  G N S   G     R    
Sbjct: 33  QEVAANRIARFGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVF 92

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIR-----GHVHTCGSNTHGQLGHGDTLDRPTPKS 262
           P LV     +   +V+ G N +  L  R     G V+T G    G+LG+        PK+
Sbjct: 93  PGLVPFFSKMGTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGY--------PKN 144

Query: 263 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFR 320
            A                       +GV    G   +F  G G++       P+  +   
Sbjct: 145 KA-----------------------DGVA---GYQGDFS-GDGQEDGPSWFTPKPSRVRF 177

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
           R    + R+S G +H +AL   G +Y WG G  G LG GD  D   P     ++ +L  +
Sbjct: 178 RDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP-----VRVYLGSE 232

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
             + K+K  V                       GV      P I        V+  S G 
Sbjct: 233 AGSGKKKENV-----------------------GVGKVRADPVI--------VTCCSAGA 261

Query: 441 YHTVVVTDRGRL--FGFGDNERAQLGHDTLRGCLEPTEI 477
            H++  T  G L  +G G N R  LGH+  RG L P  +
Sbjct: 262 KHSMACTSDGTLWTWGHGGNGRLGLGHN--RGSLSPAVV 298



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 10/182 (5%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +T +G  +  G+  +G+LG G T +  TP      + V  +  +AAG  + LA++ +G +
Sbjct: 706 ITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV-RLRSVAAGACHSLALSMDGDL 764

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG--IHVVRVSAGDEHVVALDSSGYVYTWG 349
           + +G   + C       + + PR       +G    V  +SA + H +A+  +G V+ WG
Sbjct: 765 WFWGRREDTC----STTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWG 820

Query: 350 KGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
                  G G    + L  PE ++ L S     V    + +F ++ +G V+  G +  G 
Sbjct: 821 DNKLYQTGCGKRQAERLDRPERVAGLPSACQ-WVATGPQGSFFILASGEVFAAGVIKSGR 879

Query: 408 LG 409
           LG
Sbjct: 880 LG 881



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSF--CCGHRDTNRPIFRPRLVEALKGVPCKQV 222
            V  +SASE H+  V ++G+VF  GDN  +   CG R   R + RP  V  L    C+ V
Sbjct: 796 KVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER-LDRPERVAGLPSA-CQWV 853

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 252
             G   + F+   G V   G    G+LG G
Sbjct: 854 ATGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 46.2 bits (108), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 70/185 (37%), Gaps = 34/185 (18%)

Query: 326 VVRVSAGDEHVVALDSSG---YVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQV 381
           V RV+ G  H + +   G    ++ WGK Y   LG G EI ++  P  +         +V
Sbjct: 48  VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107

Query: 382 CARKRKTFVLVDT-----GSVYGFGWMGFGSLGFPDR---------------GVSD---- 417
                 + VLV       G VY FG    G LG+P                 G  D    
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSW 167

Query: 418 ---KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
              K  R R  D  +   +++IS G  HT+ ++D G L+ +G      LG         P
Sbjct: 168 FTPKPSRVRFRDKCK---IARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTP 224

Query: 475 TEIFI 479
             +++
Sbjct: 225 VRVYL 229


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 163/365 (44%), Gaps = 26/365 (7%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           + S +SV + GS   G LG G +  + ++ + ++     +V  V     ++  +   G++
Sbjct: 1   MASATSVIAWGSGEDGQLGLGTDEEKELA-SVVDALEPFNVRSVVGGSRNSLAICDDGKL 59

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           FT G N     GH    +    P LV++L  V   Q   G      +  +G  +  G N 
Sbjct: 60  FTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNE 119

Query: 246 HGQLGHGDTLD---RPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           +GQ G   + D   RP  + I   +      +V Q+AAG ++ + +T  G V+++G    
Sbjct: 120 YGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ--- 176

Query: 300 FCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 354
                        P  I+      R +G+  VR ++ G  H +AL   G ++ WG    G
Sbjct: 177 ----------PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYG 226

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG GD   ++ P P+  L     V + A    +  L + G VYG+G    G LGF D  
Sbjct: 227 QLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDND 286

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            S K+L P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+       +P
Sbjct: 287 KSSKML-PQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQP 345

Query: 475 TEIFI 479
            E+ I
Sbjct: 346 LELPI 350


>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 437

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 138/303 (45%), Gaps = 16/303 (5%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK---QVTAGLNFTGF 231
           H+  V   G V+  GDNSS   G   TN+    P  V    G P     +V AG   +  
Sbjct: 66  HSLVVKNDGTVWAWGDNSSGQLG-IGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLA 124

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-----APLEEVGSVVQIAAGPSYMLAVT 286
           LT +G V T G N+ GQLG G   +R +P  +      PLE   ++V  A G  + LAV 
Sbjct: 125 LTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLE---NIVGAACGGKHSLAVA 181

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G V+++GS S+  +G G   +   PR +  F +    V  V+AG  H +AL   G V+
Sbjct: 182 SDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVW 241

Query: 347 TWGKGYCGALGHGDEIDKTLP-EPLSSLKSHL--AVQVCARKRKTFVLVDTGSVYGFGWM 403
            WG    G LG   + D+  P + + S+   L   V + A +  +  L   G V+ +G  
Sbjct: 242 AWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVWAWGNN 301

Query: 404 GFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
           G G LG  P  G     L  R  + +    V  I+    H++ + + G +  +G  +R Q
Sbjct: 302 GVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQ 361

Query: 463 LGH 465
           LG 
Sbjct: 362 LGQ 364



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 172/367 (46%), Gaps = 39/367 (10%)

Query: 120 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH---VVQVSASENH 175
           G YH+L++ N  +V++ G +  G LG G      +S  R+   S A    V++V+A E H
Sbjct: 63  GGYHSLVVKNDGTVWAWGDNSSGQLGIG-TNKASLSPVRVMHKSGAPLNGVLKVAAGERH 121

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPI----FRPRLVEALKGVPCKQVTAGLNF 228
           +  +   G+V+T GDNS    G     +   P+     R   +E + G  C     G   
Sbjct: 122 SLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAAC-----GGKH 176

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL-EEVGSVVQIAAGPSYMLAVTG 287
           +  +   G V   GSN+ GQ+G G   +R  P+ +    + +  V  +AAG ++ LA++ 
Sbjct: 177 SLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSV 236

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
           +G V+++G      LG    +D   P + + +  R   +VV ++AG    +AL   G V+
Sbjct: 237 DGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALTRDGEVW 296

Query: 347 TWGKGYCGALGHGDE---IDKTLPE------PLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            WG    G LG G     +   LP       PL  +++     + A  R +  L++ GSV
Sbjct: 297 AWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRA-----ITANGRHSLALMNDGSV 351

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
             +G    G LG   +G  +    P  L SL  H V  ++ G YH++ V + G +  +GD
Sbjct: 352 LAWGAGDRGQLG---QGAQNHEDHP-TLASL--HSVICLAAGRYHSLAVAENGAVLAWGD 405

Query: 458 NERAQLG 464
           N++ QLG
Sbjct: 406 NQKGQLG 412



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 122/318 (38%), Gaps = 69/318 (21%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSA 171
           +++  G  H+L L +   V++ G +  G LG G   E    V    I      ++V  + 
Sbjct: 113 LKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAAC 172

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
              H+  V   G V+  G NS    G    ++   P    R  + L GV  K V AG   
Sbjct: 173 GGKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGV--KAVAAGFAH 230

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-----PLEEVGSVVQIAAGPSYML 283
           +  L++ G V   G N  GQLG     DR  P  +      PL+   +VV IAAG ++ L
Sbjct: 231 SLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLD---NVVAIAAGRAFSL 287

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQH----DELQPRAIQTFRRKGIH-------------- 325
           A+T +G V+++G+     LG G  +    D L  RA      KG+               
Sbjct: 288 ALTRDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMN 347

Query: 326 ---------------------------------VVRVSAGDEHVVALDSSGYVYTWGKGY 352
                                            V+ ++AG  H +A+  +G V  WG   
Sbjct: 348 DGSVLAWGAGDRGQLGQGAQNHEDHPTLASLHSVICLAAGRYHSLAVAENGAVLAWGDNQ 407

Query: 353 CGALGHG--DEIDKTLPE 368
            G LG G  D+    LPE
Sbjct: 408 KGQLGIGKADKNFHALPE 425



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 20/182 (10%)

Query: 312 QPRAIQTFR-----RKGIHVVR--VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           QPR  +  R     R   H V    + G  H + + + G V+ WG    G LG G   +K
Sbjct: 36  QPRPSEEARTSARHRNAPHPVWGIAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIG--TNK 93

Query: 365 TLPEPLSSLKSHLA-----VQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVS 416
               P+  +    A     ++V A +R +  L   G V+ +G    G LG   F +R   
Sbjct: 94  ASLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSP 153

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
            KV   R + +    ++   + G  H++ V   G ++ +G N   Q+G  TL+    P +
Sbjct: 154 VKV---RHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQ 210

Query: 477 IF 478
           + 
Sbjct: 211 VM 212


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           FC G   T+    + R      G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-TVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 19/297 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G  + +GS S+  L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 26/347 (7%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           +Y   L ++ +V++CGS+  G LG+G  TT   S  R   P  +  V V+A  +HA  + 
Sbjct: 133 QYSLALHADGTVWACGSNSAGQLGNG--TTAARSAPR-PVPGLSRAVAVAAGGSHALALC 189

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             G V+  G+N     G+  T      P  V  L+GV    V  G   +  L   G V  
Sbjct: 190 ADGTVWAWGNNGYGQLGNGSTAHRA-TPVQVPGLQGV--VAVAGGYMHSLALCADGTVWA 246

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
            G N +GQLG+G T+  PTP    P+  +  VV +AAG  + LA+  +G V+++G+    
Sbjct: 247 WGFNDYGQLGNGTTVHSPTP---VPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFG 303

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LG        +P  ++  R     VV V+ G  H +A+ + G +++WG  Y G LG+G 
Sbjct: 304 QLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGS 359

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSD 417
                 P P+  L +     V A    +  +   G+V+ +G    G LG    P+R    
Sbjct: 360 FSSSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 417

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +V  P +   +       ++ G YH++ V   G L+ +G N+  QLG
Sbjct: 418 RV--PGLQGEV------AVAAGFYHSLSVQAGGSLWAWGLNDFGQLG 456



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 14/258 (5%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           + V  G  ++  L   G V  CGSN+ GQLG+G T  R  P+   P+  +   V +AAG 
Sbjct: 126 RAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPR---PVPGLSRAVAVAAGG 182

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           S+ LA+  +G V+++G+     LG+G       P  +Q    +G  VV V+ G  H +AL
Sbjct: 183 SHALALCADGTVWAWGNNGYGQLGNGSTAHRATP--VQVPGLQG--VVAVAGGYMHSLAL 238

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
            + G V+ WG    G LG+G  +    P P+  L     V V A    +  L   G+V+ 
Sbjct: 239 CADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ--VVSVAAGGFHSLALCADGTVWA 296

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +G  GFG LG     VS +  +P  ++ LR   V  ++ G YH++ V   G L+ +G+N 
Sbjct: 297 WGNNGFGQLG---EAVSTQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNY 351

Query: 460 RAQLGHDTLRGCLEPTEI 477
             QLG+ +      P  +
Sbjct: 352 SGQLGNGSFSSSARPAPV 369



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 29/312 (9%)

Query: 183 GQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
           G V+ CG NS+   G+     R   RP+  P L  A+       V AG +    L   G 
Sbjct: 142 GTVWACGSNSAGQLGNGTTAARSAPRPV--PGLSRAVA------VAAGGSHALALCADGT 193

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V   G+N +GQLG+G T  R TP  +  L+    VV +A G  + LA+  +G V+++G  
Sbjct: 194 VWAWGNNGYGQLGNGSTAHRATPVQVPGLQ---GVVAVAGGYMHSLALCADGTVWAWGFN 250

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LG+G       P  +    +    VV V+AG  H +AL + G V+ WG    G LG
Sbjct: 251 DYGQLGNGTTVHSPTPVPVPGLSQ----VVSVAAGGFHSLALCADGTVWAWGNNGFGQLG 306

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
                 +T P  +  L+    V V      +  +   GS++ +G    G LG    G   
Sbjct: 307 EAVSTQRTKPGRVEGLRE--VVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLG---NGSFS 361

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
              RP  +  L A  V+ ++ G  H+V V   G ++ +G NE  QLGH+  R     T +
Sbjct: 362 SSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHE--RAPERATPV 417

Query: 478 FIQEMEEDTGLA 489
            +  ++ +  +A
Sbjct: 418 RVPGLQGEVAVA 429



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 22/260 (8%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L L ++ +V++ G +  G LG+G   T   S T +  P  + VV V+A  
Sbjct: 226 VAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPTPVPVPGLSQVVSVAAGG 282

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  +   G V+  G+N     G    T R   +P  VE L+ V    V     F   L
Sbjct: 283 FHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREV----VAVAGGFYHSL 336

Query: 233 TIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            +R  G + + G+N  GQLG+G       P   AP++ +G+V  +AAG  + +AV  +G 
Sbjct: 337 AVRAGGSLWSWGNNYSGQLGNGSFSSSARP---APVQGLGAVTSVAAGGMHSVAVQADGT 393

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 349
           V+++G      LGH     E  P      R  G+   V V+AG  H +++ + G ++ WG
Sbjct: 394 VWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWG 448

Query: 350 KGYCGALGHGDEIDKTLPEP 369
               G LG  +     +P P
Sbjct: 449 LNDFGQLGDSEAPLMPVPAP 468


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 166/364 (45%), Gaps = 23/364 (6%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L L S+ +V++ G++  G LG G  T + V    +     + VV + A  
Sbjct: 189 VAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQVL-----SGVVAMEAGS 243

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            ++  V   G V+  G N S   G  DT      P  V  L  V    V AG + +  L 
Sbjct: 244 GYSLAVRNDGTVWAWGYNFSGQLGD-DTVTSRSTPVQVLGLSEVVA--VAAGSSLSLALR 300

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   GSN +GQ G G T +R  P     L      V +AAG ++ LAV  +G V++
Sbjct: 301 SDGTVWAWGSNDYGQRGEGTTSNRAFPVQARGLS---GGVAVAAGYAHSLAVRSDGTVWA 357

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +GS ++  LG G   +  +P  +Q        VV VSAG    +A+ S G V+ WG    
Sbjct: 358 WGSNASGQLGEGTTSNRSEPVQVQGLS----GVVAVSAGASSSLAIRSDGTVWAWGSNAS 413

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G   D+ +P  +  L   +A  V A    +  + + G+V+G+G+ G+G LG    
Sbjct: 414 GQLGDGTTTDRLVPVQVQGLSGVVA--VVAGTSFSLAVRNDGTVWGWGYNGYGQLGTF-- 469

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
             S  VL P  +  L    V  ++ G  H++ V   G ++  G N+  QLG  +      
Sbjct: 470 -TSLFVLVPVQVTGLSG--VVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSA 526

Query: 474 PTEI 477
           P ++
Sbjct: 527 PVQV 530



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 162/354 (45%), Gaps = 24/354 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L + S+ +V++ GS+  G LG G  + +      +     + VV VSA  
Sbjct: 337 VAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRS---EPVQVQGLSGVVAVSAGA 393

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           + +  +   G V+  G N+S   G   T   +  P  V+ L GV    V AG +F+  L 
Sbjct: 394 SSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLV-PVQVQGLSGVVA--VVAGTSFS--LA 448

Query: 234 IR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +R  G V   G N +GQLG   +L    P  +  L     VV +AAG  + LAV  +G V
Sbjct: 449 VRNDGTVWGWGYNGYGQLGTFTSLFVLVPVQVTGLS---GVVAVAAGNLHSLAVRSDGTV 505

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           ++ G   N  LG G   +   P  +Q     G  VV V+AGD H +A+   G V+ WG  
Sbjct: 506 WALGRNDNGQLGDGSWTNRSAP--VQVTGLSG--VVSVAAGDSHSLAVRYDGSVWAWGYN 561

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G    ++ P  ++ L    +  V A    +  +   G+V+ +G+  +G LG  
Sbjct: 562 SFGQLGDGSWFQRSAPVQVTGLSGRGS--VAASSDYSMAVRYDGTVWAWGFNLYGQLG-- 617

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           D   S   L P  +  LR   V  +  G  H++ +   G ++ +G N   QLG+
Sbjct: 618 DGTTSSNQLVPVQVQQLRG--VVAVEVGSSHSLALRSDGTVWTWGYNSFGQLGN 669



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 131/299 (43%), Gaps = 25/299 (8%)

Query: 183 GQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           G V+  G+N S     G RD      R   V+ L         AG   +  L   G V  
Sbjct: 5   GTVWAAGNNGSGQLGDGTRDN-----RSTPVQVLGLSEVVAAAAGSIHSLALRNDGTVWA 59

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
            G N +GQLG+G    R  P  +  L      V + AG  + LAV  +G V+++G   N 
Sbjct: 60  WGYNGYGQLGNGSLGSRAEPVQVQGLS---GGVSVDAGHYHSLAVRDDGTVWAWGDNPNG 116

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LG G     L P  +Q        VV V+AG  H +AL S G V+ WG    G LG G 
Sbjct: 117 QLGEGTTTRRLVPVQVQGLS----EVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEGT 172

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
             ++ +P P+  L   +AV+  A    +  L   G+V+ +G    G LG    G + K L
Sbjct: 173 TTNRLVPVPVLGLSEVVAVE--AGSSHSLALRSDGTVWAWGANASGQLG---DGTTTKRL 227

Query: 421 RP-RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            P ++L  + A     +  G  +++ V + G ++ +G N   QLG DT+     P ++ 
Sbjct: 228 VPVQVLSGVVA-----MEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVL 281



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 109/254 (42%), Gaps = 17/254 (6%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G   +L + N  +V+  G +  G LG     T       +     + VV V+A  
Sbjct: 437 VAVVAGTSFSLAVRNDGTVWGWGYNGYGQLG---TFTSLFVLVPVQVTGLSGVVAVAAGN 493

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  V   G V+  G N +   G    TNR    P  V  L GV    V AG + +  +
Sbjct: 494 LHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSA--PVQVTGLSGVVS--VAAGDSHSLAV 549

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   G N+ GQLG G    R  P  +  L   GSV   AA   Y +AV  +G V+
Sbjct: 550 RYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGRGSV---AASSDYSMAVRYDGTVW 606

Query: 293 SFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           ++G      LG G    ++L P  +Q  R     VV V  G  H +AL S G V+TWG  
Sbjct: 607 AWGFNLYGQLGDGTTSSNQLVPVQVQQLR----GVVAVEVGSSHSLALRSDGTVWTWGYN 662

Query: 352 YCGALGHGDEIDKT 365
             G LG+G  +  T
Sbjct: 663 SFGQLGNGPPLYAT 676


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 20/298 (6%)

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-------PRLVEALKGVPCKQVTAGLNF 228
           A++  QS  V+T G+ +    GH    +   R       P+L EAL+G     V  G + 
Sbjct: 63  ASYATQS-SVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASH 121

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
           +  +   G ++  GSN + +LG G++ +  T P+ +  L+ +  +V ++ G  +  AV  
Sbjct: 122 SAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGI-KIVDVSCGDYFTAAVDE 180

Query: 288 NGVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +G +YS+G G +       LGH    DE  PR + T   +G+ +  V  G+ H VAL   
Sbjct: 181 DGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKD 240

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G ++ WG G  G LG+G+     +PEP+        V + A +  +F L D G +Y +G 
Sbjct: 241 GEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTDKGELYSWGG 300

Query: 403 MGFGSLGFPDRGVSDKVLR----PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
                LG    G++  V      P ++++     V QI+ G  H   VT+ GRL+ +G
Sbjct: 301 NSQNQLGIGG-GLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMWG 357



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 167/377 (44%), Gaps = 51/377 (13%)

Query: 128 SNSSVFSCGSSLCGVLGHG---------------PETTQCVSFTRINFPSAAHVVQVSAS 172
           + SSV++ G+   G LGHG               P+ T+ +            +  V   
Sbjct: 67  TQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALE--------GKAITHVEFG 118

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            +H+A + + G+++  G N     G  +++     PR VEALKG+    V+ G  FT  +
Sbjct: 119 ASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAV 178

Query: 233 TIRGHVHTCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVT 286
              G +++ G         G LGH    D PTP+ +  L + G  +  +  G  + +A+T
Sbjct: 179 DEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALT 238

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++++G+G    LG+GE      P  I+ F +   +VV ++AG +   AL   G +Y
Sbjct: 239 KDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKD--NVVSIAAGRDFSFALTDKGELY 296

Query: 347 TWGKGYCGALGHGDEID------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           +WG      LG G  +       +++P  + +    L  Q+ A       + + G +Y +
Sbjct: 297 SWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMW 356

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G              +   + P  + ++  H ++Q++ G  +TV +TD G++F FG    
Sbjct: 357 G--------------AKIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFGKGSS 402

Query: 461 AQLGHDTLRGCLEPTEI 477
             LGH   +  L+P +I
Sbjct: 403 NCLGHGDRKNQLQPVKI 419



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 21/229 (9%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G +HT+ L  +  +++ G+   G LG+G E+  C     I F S  +VV ++A  + 
Sbjct: 227 VECGEFHTVALTKDGEIWAWGNGEYGRLGNG-ESDTCEVPEPIEFFSKDNVVSIAAGRDF 285

Query: 176 AAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           +  +   G++++ G NS    G       D       P LVEA  G+  KQ+ AG +   
Sbjct: 286 SFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAA 345

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            +T  G ++  G+    +           P  +  + E   + Q+A G  Y + +T +G 
Sbjct: 346 AVTEDGRLYMWGAKIWIE-----------PHEMTAVNE-HKMTQVACGRQYTVGLTDDGK 393

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           V++FG GS+ CLGHG++ ++LQP  IQ     G+++  VS GD H+ A+
Sbjct: 394 VFTFGKGSSNCLGHGDRKNQLQPVKIQAL--AGVNITSVSCGDYHMGAI 440



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 149/341 (43%), Gaps = 40/341 (11%)

Query: 120 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAA 177
           G  H+  I     ++  GS+    LG G E+++  +  R +       +V VS  +   A
Sbjct: 118 GASHSAAIDEEGKLYVWGSNEYSKLGLG-ESSEMETLPREVEALKGIKIVDVSCGDYFTA 176

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFR----PRLVEAL--KGVPCKQVTAGLNFTGF 231
            V + G++++ G   S   G         +    PRL+  L  +GVP   V  G   T  
Sbjct: 177 AVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVA 236

Query: 232 LTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
           LT  G +   G+  +G+LG+G  DT + P P      +   +VV IAAG  +  A+T  G
Sbjct: 237 LTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKD---NVVSIAAGRDFSFALTDKG 293

Query: 290 VVYSFGSGSNFCLGHGE------QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +YS+G  S   LG G        + E  P  ++ F   G+ V +++AG +H  A+   G
Sbjct: 294 ELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFN--GLLVKQIAAGYDHAAAVTEDG 351

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            +Y WG              K   EP  ++++  H   QV   ++ T  L D G V+ FG
Sbjct: 352 RLYMWGA-------------KIWIEPHEMTAVNEHKMTQVACGRQYTVGLTDDGKVFTFG 398

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                 LG  DR      L+P  + +L   +++ +S G YH
Sbjct: 399 KGSSNCLGHGDR---KNQLQPVKIQALAGVNITSVSCGDYH 436


>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 479

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 161/347 (46%), Gaps = 26/347 (7%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           +Y   L ++ +V++CGS+  G LG+G  TT   S  R   P  +  V V+A  +HA  + 
Sbjct: 130 QYSLALHADGTVWACGSNSAGQLGNG--TTAARSAPR-PVPGLSRAVAVAAGGSHALALC 186

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
             G V+  G+N     G+  T      P  V  L+GV    V  G   +  L   G V  
Sbjct: 187 ADGTVWAWGNNGYGQLGNGSTAH-RATPVQVPGLQGV--VAVAGGYMHSLALCADGTVWA 243

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
            G N +GQLG+G T+  PTP    P+  +  VV +AAG  + LA+  +G V+++G+    
Sbjct: 244 WGFNDYGQLGNGTTVHSPTP---VPVPGLSQVVSVAAGGFHSLALCADGTVWAWGNNGFG 300

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LG        +P  ++  R     VV V+ G  H +A+ + G +++WG  Y G LG+G 
Sbjct: 301 QLGEAVSTQRTKPGRVEGLR----EVVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGS 356

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSD 417
                 P P+  L +     V A    +  +   G+V+ +G    G LG    P+R    
Sbjct: 357 FSSSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 414

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +V  P +   +       ++ G YH++ V   G L+ +G N+  QLG
Sbjct: 415 RV--PGLQGEV------AVAAGFYHSLSVQAGGSLWAWGLNDFGQLG 453



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 126/258 (48%), Gaps = 14/258 (5%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           + V  G  ++  L   G V  CGSN+ GQLG+G T  R  P+   P+  +   V +AAG 
Sbjct: 123 RAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPR---PVPGLSRAVAVAAGG 179

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           S+ LA+  +G V+++G+     LG+G       P  +Q    +G  VV V+ G  H +AL
Sbjct: 180 SHALALCADGTVWAWGNNGYGQLGNGSTAHRATP--VQVPGLQG--VVAVAGGYMHSLAL 235

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
            + G V+ WG    G LG+G  +    P P+  L     V V A    +  L   G+V+ 
Sbjct: 236 CADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ--VVSVAAGGFHSLALCADGTVWA 293

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +G  GFG LG     VS +  +P  ++ LR   V  ++ G YH++ V   G L+ +G+N 
Sbjct: 294 WGNNGFGQLG---EAVSTQRTKPGRVEGLR--EVVAVAGGFYHSLAVRAGGSLWSWGNNY 348

Query: 460 RAQLGHDTLRGCLEPTEI 477
             QLG+ +      P  +
Sbjct: 349 SGQLGNGSFSSSARPAPV 366



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 29/312 (9%)

Query: 183 GQVFTCGDNSSFCCGH-----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
           G V+ CG NS+   G+     R   RP+  P L  A+       V AG +    L   G 
Sbjct: 139 GTVWACGSNSAGQLGNGTTAARSAPRPV--PGLSRAVA------VAAGGSHALALCADGT 190

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V   G+N +GQLG+G T  R TP  +  L+    VV +A G  + LA+  +G V+++G  
Sbjct: 191 VWAWGNNGYGQLGNGSTAHRATPVQVPGLQ---GVVAVAGGYMHSLALCADGTVWAWGFN 247

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LG+G       P  +    +    VV V+AG  H +AL + G V+ WG    G LG
Sbjct: 248 DYGQLGNGTTVHSPTPVPVPGLSQ----VVSVAAGGFHSLALCADGTVWAWGNNGFGQLG 303

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
                 +T P  +  L+    V V      +  +   GS++ +G    G LG    G   
Sbjct: 304 EAVSTQRTKPGRVEGLRE--VVAVAGGFYHSLAVRAGGSLWSWGNNYSGQLG---NGSFS 358

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
              RP  +  L A  V+ ++ G  H+V V   G ++ +G NE  QLGH+  R     T +
Sbjct: 359 SSARPAPVQGLGA--VTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHE--RAPERATPV 414

Query: 478 FIQEMEEDTGLA 489
            +  ++ +  +A
Sbjct: 415 RVPGLQGEVAVA 426



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 22/260 (8%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L L ++ +V++ G +  G LG+G   T   S T +  P  + VV V+A  
Sbjct: 223 VAVAGGYMHSLALCADGTVWAWGFNDYGQLGNG---TTVHSPTPVPVPGLSQVVSVAAGG 279

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  +   G V+  G+N     G    T R   +P  VE L+ V    V     F   L
Sbjct: 280 FHSLALCADGTVWAWGNNGFGQLGEAVSTQR--TKPGRVEGLREV----VAVAGGFYHSL 333

Query: 233 TIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            +R  G + + G+N  GQLG+G       P   AP++ +G+V  +AAG  + +AV  +G 
Sbjct: 334 AVRAGGSLWSWGNNYSGQLGNGSFSSSARP---APVQGLGAVTSVAAGGMHSVAVQADGT 390

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 349
           V+++G      LGH     E  P      R  G+   V V+AG  H +++ + G ++ WG
Sbjct: 391 VWAWGRNEEGQLGH-----ERAPERATPVRVPGLQGEVAVAAGFYHSLSVQAGGSLWAWG 445

Query: 350 KGYCGALGHGDEIDKTLPEP 369
               G LG  +     +P P
Sbjct: 446 LNDFGQLGDSEAPLMPVPAP 465


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 147/322 (45%), Gaps = 20/322 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 341
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAIVEV 433

Query: 342 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                    S  +YTWG G    LGHGD+  + +P+ + +L  +   Q+      T  L 
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALA 493

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G    G LG P        L   + D L +  V +IS G  H  V+T R  +
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCL---VQDRLASELVEEISCGASHVTVLTSRSEV 550

Query: 453 FGFGDNERAQLGHDTLRGCLEP 474
           + +G     +LGH  L+   +P
Sbjct: 551 YTWGMGANGRLGHGDLKDRKKP 572



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 226
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 227 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
               N TG   +   ++T G     +LGHGD   R  PK +  L E  +  Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-NFHQLACGHNMT 489

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 147/354 (41%), Gaps = 40/354 (11%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 222
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G   +   T  G ++T G  T G LGHGD      PK +  L      +++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF-KTIKVACGIWHS 427

Query: 283 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH--QLACG 485

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
               VAL +SG V+T G    G LG+     K        L S L  ++        VL 
Sbjct: 486 HNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT 545

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
               VY +G    G LG  D  + D+  +P ++++L+  HV  IS G   T  +
Sbjct: 546 SRSEVYTWGMGANGRLGHGD--LKDRK-KPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 14/292 (4%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L     ++V 
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVA 421

Query: 383 ARKRKTFVLVDTGSVYGFGWM-------GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
                +  +V+  +  G   M       G G       G  +  L P+ + +L  ++  Q
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQ 481

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 484
           ++ G   TV +   GR+F  G +   QLG+   D  + CL    +  + +EE
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  Y+       V  S G  S+ C     + D L P+ +++     + V +++ G  HV 
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSC----SKVDVLIPKPLES--DVVLDVNQIACGTRHVA 269

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
                G V+TWG+ + G LGHG + D + P+ + SL   +   +   +  T  +  +G +
Sbjct: 270 LTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDL 329

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           + +G  G  ++G    G       P+ +   L    V  ++ G +H+ + T  G+L+ FG
Sbjct: 330 FNWG-DGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 457 DNERAQLGHDTLRGCLEPTEI 477
           D     LGH        P E+
Sbjct: 389 DGTFGVLGHGDRETLAYPKEV 409


>gi|167518173|ref|XP_001743427.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778526|gb|EDQ92141.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1024

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 160/339 (47%), Gaps = 34/339 (10%)

Query: 145 HGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR- 203
            GP +T   S+  +  PS       +A   H+  V   G V++ G N      HR   R 
Sbjct: 18  EGPIST---SYRSLAVPSGLRAA--AAGAYHSLLVTTDGLVYSAGKND-----HRQLGRS 67

Query: 204 -PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---T 259
            P    + +EA++    +QV AG +F+  L  RG V+  G+   GQLG G          
Sbjct: 68  GPAGIFKRIEAIEVASIRQVAAGEDFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRV 127

Query: 260 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           PK I  L +V  +V ++ G  + LA++ + +V+++G  +N  LG+G      QP  I   
Sbjct: 128 PKIIRSLHDV-PIVALSVGGRHALALSASSIVFAWGENANGQLGNGHFVPSYQPTPIPEL 186

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
             +G  VV ++AG +H +AL ++  +Y +G    G LG GD   +  PE + +      V
Sbjct: 187 NGRG--VVGLAAGRQHSLALTAASELYAFGANEHGQLGVGDTKPRLRPELVRAALRKGLV 244

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQIST 438
           +V A    +     TG  + +G   +G  G  D   +D +L PR +DS++ H H++ I+T
Sbjct: 245 KVSAGDFHSLARSATGHAFAWGGNQWGQCGVGDD--ADAILLPREIDSVQEHGHIADIAT 302

Query: 439 GLYHTV--VVTD-----------RGRLFGFGDNERAQLG 464
           G  H+V  VVT            +  LF FG N  AQLG
Sbjct: 303 GKRHSVLLVVTSNQTTPTPSTFHKQLLFTFGANSLAQLG 341



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 120/265 (45%), Gaps = 16/265 (6%)

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP----KSIAPLEEVGSVVQ 274
            +   AG   +  +T  G V++ G N H QLG      R  P    K I  +E V S+ Q
Sbjct: 34  LRAAAAGAYHSLLVTTDGLVYSAGKNDHRQLG------RSGPAGIFKRIEAIE-VASIRQ 86

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGD 333
           +AAG  + L +   G VY+ G+G    LG G Q  E   R  +  R    + +V +S G 
Sbjct: 87  VAAGEDFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVPIVALSVGG 146

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
            H +AL +S  V+ WG+   G LG+G  +    P P+  L     V + A ++ +  L  
Sbjct: 147 RHALALSASSIVFAWGENANGQLGNGHFVPSYQPTPIPELNGRGVVGLAAGRQHSLALTA 206

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
              +Y FG    G LG  D   +   LRP ++ +     + ++S G +H++  +  G  F
Sbjct: 207 ASELYAFGANEHGQLGVGD---TKPRLRPELVRAALRKGLVKVSAGDFHSLARSATGHAF 263

Query: 454 GFGDNERAQLG-HDTLRGCLEPTEI 477
            +G N+  Q G  D     L P EI
Sbjct: 264 AWGGNQWGQCGVGDDADAILLPREI 288



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 15/232 (6%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQ------CVSFTRINFPSAAHVVQ 168
           Q+  G   +L++ +   V++ G+   G LG G +T++       +  +  + P    +V 
Sbjct: 86  QVAAGEDFSLMLDDRGKVYAVGAGERGQLGCGRQTSEEGHRVPKIIRSLHDVP----IVA 141

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           +S    HA  +  S  VF  G+N++   G+     P ++P  +  L G     + AG   
Sbjct: 142 LSVGGRHALALSASSIVFAWGENANGQLGNGHFV-PSYQPTPIPELNGRGVVGLAAGRQH 200

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT    ++  G+N HGQLG GDT  R  P+ +      G +V+++AG  + LA +  
Sbjct: 201 SLALTAASELYAFGANEHGQLGVGDTKPRLRPELVRAALRKG-LVKVSAGDFHSLARSAT 259

Query: 289 GVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           G  +++G       G G+  D  L PR I + +  G H+  ++ G  H V L
Sbjct: 260 GHAFAWGGNQWGQCGVGDDADAILLPREIDSVQEHG-HIADIATGKRHSVLL 310


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 144/323 (44%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 311

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 312 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 370

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 428

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SS  ++TWG G    LGHG++    LP  +SSL  +   ++      T  L 
Sbjct: 429 MGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALT 488

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G    G LG     +SD  L   + D L    V +I+ G +H  V+T R  +
Sbjct: 489 TSGHVFTMGGTAHGQLG---NSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEV 545

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           F +G     +LGH        PT
Sbjct: 546 FTWGKGANGRLGHGDTEDKRTPT 568



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 133/272 (48%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 366

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 231
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425

Query: 232 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 484

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ G  HV  L S 
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGAHHVAVLTSR 542

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 543 SEVFTWGKGANGRLGHGDTEDKRTPTLVEALR 574



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 13/300 (4%)

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           G+V+T G        +      +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 217 GEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 301
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335

Query: 302 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 336 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 394

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT--------GSVYGFGWMGFGSLGFPD 412
               + P+ + SL     V+V      T  +V+          S   F W G G      
Sbjct: 395 RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTW-GDGDKNRLG 453

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            G  +  L P  + SL  ++  +I+ G   TV +T  G +F  G     QLG+    G L
Sbjct: 454 HGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL 513



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 141/345 (40%), Gaps = 36/345 (10%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 307

Query: 168 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 308 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 366

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              +   T  G + T G    G LGHG+      PK +  L  +   V++A    +  A+
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGL-KTVKVACSIWHTAAI 425

Query: 286 T----------GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
                       +  ++++G G    LGHG +   L P  + +      H  +++ G   
Sbjct: 426 VEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTF 483

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDT 394
            VAL +SG+V+T G    G LG+    D  LP  +   L      ++        VL   
Sbjct: 484 TVALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSR 542

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
             V+ +G    G LG  D    DK   P ++++LR  HV  +S G
Sbjct: 543 SEVFTWGKGANGRLGHGD--TEDKRT-PTLVEALRDRHVKSLSCG 584



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 361 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 418

Query: 173 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 419 IWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 477

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 281
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGAHH 535

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR--HVKSLSCGSN----FTS 589

Query: 342 SGYVYTWGKG 351
           S  ++ W  G
Sbjct: 590 SICIHKWVSG 599



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 28/185 (15%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT- 150
           + ++   S+ H++ IVE       Q  T       +S+  +F+ G      LGHG + T 
Sbjct: 411 KTVKVACSIWHTAAIVEVMG----QTATS------MSSRKLFTWGDGDKNRLGHGNKETY 460

Query: 151 ---QCVS-FTRINFPSAA--HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP 204
               CVS     NF   A  H   V+        +  SG VFT G  +    G+  ++  
Sbjct: 461 LLPTCVSSLIDYNFHKIACGHTFTVA--------LTTSGHVFTMGGTAHGQLGNSISDGK 512

Query: 205 IFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           +  P LV+  L G   +++  G +    LT R  V T G   +G+LGHGDT D+ TP  +
Sbjct: 513 L--PCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLV 570

Query: 264 APLEE 268
             L +
Sbjct: 571 EALRD 575


>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1070

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 171/408 (41%), Gaps = 52/408 (12%)

Query: 116 QITTGRYHTLLIS-----NSSVFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAH 165
           Q+   +Y+T + S     +   ++ G +  G LG    TT   S   I       P+   
Sbjct: 560 QVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGDA--TTNSRSTPNIVRKPTGVPTDFT 617

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDN------------SSFCCGHRDTNRPIFRPRLVEA 213
            VQVSA + H+  +   G V+  G N            SS     RD   P       + 
Sbjct: 618 YVQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANP------TDP 671

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEV 269
            KG+   QV+AG   +  L   G+V+  G N +G+LG+  T D   P  +    +P +  
Sbjct: 672 NKGLKAIQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPS 731

Query: 270 G--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR-----RK 322
                VQ++AG  + LAV  +G  Y++G  +   LG+  ++    P  ++ F       K
Sbjct: 732 KGLKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANK 791

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP-------EPLSSLKS 375
           G+  V+VSAG  H +A+ S GY Y WG    G LG+ + +D T+P        P  + K 
Sbjct: 792 GLKAVQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKG 851

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRP-RILDSLRAH 431
             A  + A    +  + + G  Y +GW  +  LG     +  V   V  P    D+ +  
Sbjct: 852 LKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGL 911

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
             ++ S G +H++ V   G  + +G+N   QLG  T      P  +  
Sbjct: 912 QATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSVLF 959



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 126/278 (45%), Gaps = 26/278 (9%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 166
           +Q++ G  H+L L SN  V++ G +  G LG+   T   V   R+  P++          
Sbjct: 678 IQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPV-RVRDPASPTDPSKGLKA 736

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCK 220
           VQVSA  +H+  V   G  +  G N+    G+   N   F  R+       +A KG+   
Sbjct: 737 VQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAV 796

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI----APLEEVG--SVVQ 274
           QV+AG + +  +   G+ +  G N +GQLG+ +T+D   P  +    +P +         
Sbjct: 797 QVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATA 856

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRV 329
           I AG  + LAV  NG  Y++G      LG G   +   P  ++         KG+   R 
Sbjct: 857 INAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRF 916

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           S GD H +A+ S+GY Y WG+   G LG G   D  +P
Sbjct: 917 SVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVP 954



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 144/327 (44%), Gaps = 33/327 (10%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-------HV 166
           +Q++ G++H+L + S+  V++ GS+  G LG+  +T   V   R+  P+           
Sbjct: 619 VQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPV-RVRDPANPTDPNKGLKA 677

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCK 220
           +QVSA + H+  +  +G V+  G N +   G+  T       R+       +  KG+   
Sbjct: 678 IQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAV 737

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---KSIAPLEEVGS---VVQ 274
           QV+AG + +  +   G+ +  G N +GQLG+        P   +  A   +       VQ
Sbjct: 738 QVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQ 797

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ-----TFRRKGIHVVRV 329
           ++AG S+ LAV  +G  Y++G  +   LG+    D   P  ++         KG+    +
Sbjct: 798 VSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAI 857

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP-------EPLSSLKSHLAVQVC 382
           +AG EH +A+ ++GY Y WG      LG G   + ++P        P  + K   A +  
Sbjct: 858 NAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRFS 917

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLG 409
                +  +   G  Y +G   +G LG
Sbjct: 918 VGDHHSLAVGSNGYAYAWGENSYGQLG 944



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 19/221 (8%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSAAH----VV 167
           +Q++ G +H+L + S+   ++ G +  G LG+  + +        +F  P+ A+     V
Sbjct: 737 VQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAV 796

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL------VEALKGVPCKQ 221
           QVSA  +H+  V   G  +  G N+    G+ +T       R+       +A KG+    
Sbjct: 797 QVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATA 856

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP------KSIAPLEEVGSVVQI 275
           + AG   +  +   G+ +  G N + QLG G T +   P       S A   +     + 
Sbjct: 857 INAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPADASKGLQATRF 916

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 316
           + G  + LAV  NG  Y++G  S   LG G   D   P ++
Sbjct: 917 SVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSV 957



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 28/195 (14%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-------V 166
           +Q++ G  H+L + S+   ++ G +  G LG+   T       R+  P++          
Sbjct: 796 VQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNS-NTVDSTVPVRVRDPTSPKDASKGLKA 854

Query: 167 VQVSASENHAAFVLQSGQVFTCG------------DNSSFCCGHRDTNRPIFRPRLVEAL 214
             ++A   H+  V  +G  +  G             NSS     RD   P       +A 
Sbjct: 855 TAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSP------ADAS 908

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVV 273
           KG+   + + G + +  +   G+ +  G N++GQLG G T D   P S+   L+ V +  
Sbjct: 909 KGLQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDGTTDDSNVPVSVLFNLQPVITAA 968

Query: 274 QIAAGPSYMLAVTGN 288
           +    P   LA   N
Sbjct: 969 RFDTSPGTNLASVSN 983


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 147/322 (45%), Gaps = 20/322 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGH-GTDADISRPKLVESLSLTVVDLISCG 316

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G +   G  ++  G LG G  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGL-QVLSVACGSWHS 375

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 341
              T +G +Y+FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 376 ALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEAL--SGFKTIKVACGIWHSAAIVEV 433

Query: 342 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                    S  +YTWG G    LGHGD+  + +P+ + +L  +   Q+      T  L 
Sbjct: 434 TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALA 493

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G    G LG P        L   + D L +  V +IS G  H  V+T R  +
Sbjct: 494 TSGRVFTMGSSSNGQLGNPKSDGKQPCL---VQDRLASELVEEISCGASHVTVLTSRSEV 550

Query: 453 FGFGDNERAQLGHDTLRGCLEP 474
           + +G     +LGH  L+   +P
Sbjct: 551 YTWGMGANGRLGHGDLKDRKKP 572



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCG--SSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           I+ G +HT  ++ S  +F+ G  S   G+LG G E +  +   +++ P     V+ V+  
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP-KKVSGPLEGLQVLSVACG 371

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL------ 226
             H+A    SG+++T GD +    GH D     + P+ VEAL G    +V  G+      
Sbjct: 372 SWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAY-PKEVEALSGFKTIKVACGIWHSAAI 430

Query: 227 ----NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
               N TG   +   ++T G     +LGHGD   R  PK +  L E  +  Q+A G +  
Sbjct: 431 VEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEY-NFHQLACGHNMT 489

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+  +G V++ GS SN  LG+  + D  QP  +Q  R     V  +S G  HV  L S 
Sbjct: 490 VALATSGRVFTMGSSSNGQLGN-PKSDGKQPCLVQD-RLASELVEEISCGASHVTVLTSR 547

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             VYTWG G  G LGHGD  D+  P  + +LK
Sbjct: 548 SEVYTWGMGANGRLGHGDLKDRKKPCLVEALK 579



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 148/354 (41%), Gaps = 40/354 (11%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
           QI  G  H  L +    VF+ G    G LGHG       P+  + +S T ++        
Sbjct: 260 QIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDL------- 312

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSS----FCCGHRDTNRPIFRPRLVEA-LKGVPCKQV 222
            +S  E H   V  SG +F  GD S       CG   T    + P+ V   L+G+    V
Sbjct: 313 -ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCG---TEVSYWLPKKVSGPLEGLQVLSV 368

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G   +   T  G ++T G  T G LGHGD      PK +  L    ++ ++A G  + 
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTI-KVACGIWHS 427

Query: 283 LAV------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            A+      TG  V+    Y++G G    LGHG++   L P+ +Q       H  +++ G
Sbjct: 428 AAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH--QLACG 485

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
               VAL +SG V+T G    G LG+     K        L S L  ++        VL 
Sbjct: 486 HNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLT 545

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
               VY +G    G LG  D  + D+  +P ++++L+  HV  IS G   T  +
Sbjct: 546 SRSEVYTWGMGANGRLGHGD--LKDRK-KPCLVEALKDRHVKSISCGSNFTTCI 596



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 131/293 (44%), Gaps = 16/293 (5%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVE 303

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  +  V  I+ G  +  AVT +G ++++G GS     LG G +     P+ + +   +
Sbjct: 304 SL-SLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKV-SGPLE 361

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V+ V+ G  H     SSG +YT+G G  G LGHGD      P+ + +L     ++V 
Sbjct: 362 GLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKVA 421

Query: 383 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
                +  +V+  +  G        + W G G       G  +  L P+ + +L  ++  
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTW-GDGDKNRLGHGDKEPRLVPKCVQALLEYNFH 480

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 484
           Q++ G   TV +   GR+F  G +   QLG+   D  + CL    +  + +EE
Sbjct: 481 QLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEE 533



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  Y+       V  S G  S+ C     + D L P+ +++     + V +++ G  HV 
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSC----SKVDVLIPKPLES--DVVLDVNQIACGTRHVA 269

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
                G V+TWG+ + G LGHG + D + P+ + SL   +   +   +  T  +  +G +
Sbjct: 270 LTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDL 329

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           + +G  G  ++G    G       P+ +   L    V  ++ G +H+ + T  G+L+ FG
Sbjct: 330 FNWG-DGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFG 388

Query: 457 DNERAQLGHDTLRGCLEPTEI 477
           D     LGH        P E+
Sbjct: 389 DGTFGVLGHGDRETLAYPKEV 409


>gi|345857538|ref|ZP_08809972.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
 gi|344329366|gb|EGW40710.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
          Length = 732

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 163/339 (48%), Gaps = 21/339 (6%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           +V++ G +  G LG G   T  V+ T I      +V+ VSA   HA  +   G V+  G+
Sbjct: 64  NVWAWGDNSEGQLGQGVADTNPVA-TPIQVKDLTNVISVSAGGVHALALKADGTVWAWGN 122

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N +   G  D   PI  PR VE L+ +    + AGL F+  L+  G V   G+N + Q+ 
Sbjct: 123 NETDQLG-VDQASPIAIPRQVEGLQNIVA--IAAGLEFSLALSSDGKVWAWGANEYKQIN 179

Query: 251 H-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           +  D +   TP+ +     +  VV+IAAG ++ LA+  +G V+++G+     +G+ +Q  
Sbjct: 180 YFSDAIKIATPQIV---NNLSGVVKIAAGSAWCLALKNDGTVWTWGA-QKVPMGNDDQDG 235

Query: 310 ELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           E+        +  GI  V+ VSAG  H +AL   G V+ WG      LG  D+     P 
Sbjct: 236 EVT-NITNLTQINGISDVISVSAGYSHSLALKGDGTVWGWGSNELLQLGSHDQQWFDSPV 294

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            +S LK+     V A    T  L + G+V+  G   +G LG    G+    L P     +
Sbjct: 295 QISPLKN--VTTVSAGAYLTMALTNDGTVWTLGGNIYGQLG---NGIKADSL-PITAYPV 348

Query: 429 RAHHVSQ---ISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +A +++Q   IS G Y   +    G ++G+GDN + QLG
Sbjct: 349 KASNITQATSISAG-YGFALGRALGSVWGWGDNSKGQLG 386



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 12/268 (4%)

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
           +A       Q+ AG NF   +  +G+V   G N+ GQLG G     P    I  ++++ +
Sbjct: 39  DARPAAASSQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVADTNPVATPIQ-VKDLTN 97

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V+ ++AG  + LA+  +G V+++G+     LG  +      PR ++  +    ++V ++A
Sbjct: 98  VISVSAGGVHALALKADGTVWAWGNNETDQLGVDQASPIAIPRQVEGLQ----NIVAIAA 153

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGH-GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           G E  +AL S G V+ WG      + +  D I    P+ +++L     V++ A       
Sbjct: 154 GLEFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQIVNNLSG--VVKIAAGSAWCLA 211

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA-HHVSQISTGLYHTVVVTDR 449
           L + G+V+ +G      +G  D+    +V     L  +     V  +S G  H++ +   
Sbjct: 212 LKNDGTVWTWGAQKV-PMGNDDQ--DGEVTNITNLTQINGISDVISVSAGYSHSLALKGD 268

Query: 450 GRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           G ++G+G NE  QLG    +    P +I
Sbjct: 269 GTVWGWGSNELLQLGSHDQQWFDSPVQI 296



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 145/309 (46%), Gaps = 23/309 (7%)

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVPCK 220
           AA   Q++A  N    V   G V+  GDNS    G    DTN P+  P  V+ L  V   
Sbjct: 43  AAASSQLAAGANFGLAVDAQGNVWAWGDNSEGQLGQGVADTN-PVATPIQVKDLTNV--I 99

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGP 279
            V+AG      L   G V   G+N   QLG    +D+ +P +I   +E + ++V IAAG 
Sbjct: 100 SVSAGGVHALALKADGTVWAWGNNETDQLG----VDQASPIAIPRQVEGLQNIVAIAAGL 155

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVA 338
            + LA++ +G V+++G+     + +     ++  P+ +         VV+++AG    +A
Sbjct: 156 EFSLALSSDGKVWAWGANEYKQINYFSDAIKIATPQIVNNLS----GVVKIAAGSAWCLA 211

Query: 339 LDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGS 396
           L + G V+TWG      +G+ D+  + T    L+ +      + V A    +  L   G+
Sbjct: 212 LKNDGTVWTWGAQKV-PMGNDDQDGEVTNITNLTQINGISDVISVSAGYSHSLALKGDGT 270

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           V+G+G      LG  D+   D    P  +  L+  +V+ +S G Y T+ +T+ G ++  G
Sbjct: 271 VWGWGSNELLQLGSHDQQWFDS---PVQISPLK--NVTTVSAGAYLTMALTNDGTVWTLG 325

Query: 457 DNERAQLGH 465
            N   QLG+
Sbjct: 326 GNIYGQLGN 334


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 160/332 (48%), Gaps = 13/332 (3%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 172
           +I  G+  T L+ +N SVF+CG    G LG G    +  S   I       ++Q++ S  
Sbjct: 323 EIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDE-HSLVPITELQGYCIIQLATSLG 381

Query: 173 -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            + H   V  SG+VF+ GD      GH ++ R   +P+ + AL+     Q + G   +  
Sbjct: 382 GDGHTLAVADSGEVFSWGDGDYGKLGHGNSERQ-RKPKQIIALQAEHVVQASCGFKHSAV 440

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV- 290
           LT  G V T G   +G LG G    + TP+ I  L+    + QIA G  + LA+  NG  
Sbjct: 441 LTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKN-EHISQIACGKDHTLALANNGKK 499

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           +Y++G G    LG G       P  + ++R   + + +++ G +  + L ++GY+YT+G 
Sbjct: 500 LYAWGDGEFGKLGLGSTSVRSIPNLVDSYR--NVCLKKIACGSKFSIVLATNGYLYTFGH 557

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
                +   D +D T+P+ +SSL  H  + +         L ++G+++G+G    G LG 
Sbjct: 558 KDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLGI 617

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
              G ++    P+++ +    +++++S G  H
Sbjct: 618 ---GTTNPHYLPQLVCTFSGTNITRLSAGTTH 646



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 164/339 (48%), Gaps = 16/339 (4%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQS-GQVFTCG 189
           +V+  GS++ G L  G +   C+   + N  S    V+      +  F+LQ+ G VF CG
Sbjct: 289 TVYVWGSNIHGELP-GLQGKTCL---QPNLVSTFKQVREIVCGQNCTFLLQTNGSVFACG 344

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTH 246
           + +    G   ++       + E L+G    Q+   L   G    +   G V + G   +
Sbjct: 345 EGTYGRLGQGTSDDEHSLVPITE-LQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDY 403

Query: 247 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           G+LGHG++  +  PK I  L+    VVQ + G  +   +T +G V++FG G    LG G 
Sbjct: 404 GKLGHGNSERQRKPKQIIALQ-AEHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGG 462

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKT 365
              +  P+ I + + +  H+ +++ G +H +AL ++G  +Y WG G  G LG G    ++
Sbjct: 463 NSPQKTPQLILSLKNE--HISQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRS 520

Query: 366 LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
           +P  + S ++    ++    + + VL   G +Y FG   F  LG  +  + D  + P+I+
Sbjct: 521 IPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDF--LGIAETDLLDNTI-PQIV 577

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            SL  H +  I+ G  + + + + G ++G+G NE  QLG
Sbjct: 578 SSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLG 616



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 8/142 (5%)

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VY WG    G L          P  +S+ K    + VC +   TF+L   GSV+  G   
Sbjct: 290 VYVWGSNIHGELPGLQGKTCLQPNLVSTFKQVREI-VCGQN-CTFLLQTNGSVFACGEGT 347

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
           +G LG   +G SD       +  L+ + + Q++T L    HT+ V D G +F +GD +  
Sbjct: 348 YGRLG---QGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGDYG 404

Query: 462 QLGHDTLRGCLEPTEIFIQEME 483
           +LGH       +P +I   + E
Sbjct: 405 KLGHGNSERQRKPKQIIALQAE 426


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 140/286 (48%), Gaps = 16/286 (5%)

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGHVHTC 241
           F+ G N+    G   T   +  P  + AL+G+    V  G       +  +T +G V+T 
Sbjct: 1   FSWGFNNDGALG-LGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTW 59

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           GS   GQLGHGD+ +   P+ I  L+    +V++A G ++ + V+  G+V+++G G    
Sbjct: 60  GSGKSGQLGHGDSQNLVLPRLIVGLQS-NPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LG G  H+   P  +Q     G+ V +V+ G  H   +  SG+VYTWG G  G LGHGD+
Sbjct: 119 LGVGSTHNSNDP--VQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDD 176

Query: 362 IDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV--SDK 418
             ++ P  +  L   +++   C       V     +V+ +GW  +G LG     +   +K
Sbjct: 177 ASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNK 236

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              PR +  L+     QI+ G  +T+ ++ RG ++ FG  +  QLG
Sbjct: 237 NRSPRPIKDLQ-----QIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 115/231 (49%), Gaps = 11/231 (4%)

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG----PSYMLAVTGNGVVYSFG 295
           + G N  G LG G T    +P  I  L+ +  VV +A G      +  AVT  G VY++G
Sbjct: 2   SWGFNNDGALGLGTTDAVGSPCPIIALQGL-LVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           SG +  LGHG+  + + PR I   +   I  V V+ G  H V +  +G V+ WG G+ G 
Sbjct: 61  SGKSGQLGHGDSQNLVLPRLIVGLQSNPI--VEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G   +   P  ++SL      +V      T V+ ++G VY +GW   G LG  D   
Sbjct: 119 LGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDAS 178

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNERAQLGH 465
                RP  +  L   +VS ++ GL HTVVV++  R +F +G +E  QLGH
Sbjct: 179 QS---RPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGH 226



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 114/245 (46%), Gaps = 15/245 (6%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           + E H+A V + GQV+T G   S   GH D+   +  PRL+  L+  P  +V  G   T 
Sbjct: 42  SEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVL-PRLIVGLQSNPIVEVACGSAHTV 100

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            ++  G V   G    GQLG G T +   P  +  L+ V  V ++A G ++   VT +G 
Sbjct: 101 VVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGV-KVCKVACGSAHTAVVTESGH 159

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGYVYTWG 349
           VY++G G N  LGHG+  D  Q R +   +  GI+V  ++ G  H VV  +    V++WG
Sbjct: 160 VYTWGWGVNGQLGHGD--DASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWG 217

Query: 350 KGYCGALGHGDEI-----DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
               G LGHG            P P+  L+     Q+      T  L   G VY FGW  
Sbjct: 218 WDEYGQLGHGGWDIFGGNKNRSPRPIKDLQ-----QIACGSSYTLALSSRGDVYAFGWGK 272

Query: 405 FGSLG 409
            G LG
Sbjct: 273 DGQLG 277



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 9/178 (5%)

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG----DEHVVALDSSGYVYT 347
           +S+G  ++  LG G       P  I     +G+ VV V+ G    ++H  A+   G VYT
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPI--IALQGLLVVSVACGGGSEEQHSAAVTEQGQVYT 58

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG G  G LGHGD  +  LP  +  L+S+  V+V      T V+   G V+ +GW  FG 
Sbjct: 59  WGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQ 118

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           LG      S+  ++   LD ++   V +++ G  HT VVT+ G ++ +G     QLGH
Sbjct: 119 LGVGSTHNSNDPVQVTSLDGVK---VCKVACGSAHTAVVTESGHVYTWGWGVNGQLGH 173



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 16/243 (6%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           ++   +     V++ GS   G LGHG      +    +   S   +V+V+    H   V 
Sbjct: 45  QHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNP-IVEVACGSAHTVVVS 103

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           ++G VF  G       G   T+     P  V +L GV   +V  G   T  +T  GHV+T
Sbjct: 104 KAGLVFAWGWGHFGQLGVGSTHNS-NDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYT 162

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-NGVVYSFGSGSN 299
            G   +GQLGHGD   +  P  +  L  +  V  +A G ++ + V+  +  V+S+G    
Sbjct: 163 WGWGVNGQLGHGDDASQSRPMYVKKLHGI-YVSTLACGLAHTVVVSEVDRAVFSWGWDEY 221

Query: 300 FCLGHGEQ-----HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
             LGHG       +    PR I+  +       +++ G  + +AL S G VY +G G  G
Sbjct: 222 GQLGHGGWDIFGGNKNRSPRPIKDLQ-------QIACGSSYTLALSSRGDVYAFGWGKDG 274

Query: 355 ALG 357
            LG
Sbjct: 275 QLG 277



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC----ARKRKTFVLVDTGSVYGFG 401
           ++WG    GALG G       P P+ +L+  L V V     + ++ +  + + G VY +G
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
               G LG  D   S  ++ PR++  L+++ + +++ G  HTVVV+  G +F +G     
Sbjct: 61  SGKSGQLGHGD---SQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFG 117

Query: 462 QLGHDTLRGCLEPTEI 477
           QLG  +     +P ++
Sbjct: 118 QLGVGSTHNSNDPVQV 133


>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
           CCMP2712]
          Length = 279

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 6/268 (2%)

Query: 189 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
           G   + C GH       + P+ +++LK     QV  G      L   G +++ G   +G+
Sbjct: 3   GTGFNLCLGHGSHANEKY-PKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGR 61

Query: 249 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
           LGHG+  D   PK +A  ++  + VQIA G ++   +T +G +YS+G G N  LG+GE+H
Sbjct: 62  LGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNGERH 121

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D+  P  +   R + + V  V+ G     A    G +++WG G  G LG GD  D+  P 
Sbjct: 122 DQWTPNLV--LRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPS 179

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            +   +    ++V   +     L + G ++G+   G G+ G    G + +VL P  L   
Sbjct: 180 LVRLREEDRIIRVACGEHHCLALTEDGKLWGW---GRGTGGCHGLGHTSEVLSPHKLPMP 236

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFG 456
               +  +S G +H+  +T RG +F FG
Sbjct: 237 EDRTIVSMSCGRWHSAYLTIRGDIFCFG 264



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 133/271 (49%), Gaps = 10/271 (3%)

Query: 133 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 192
           +  G +LC  LGHG    +      I       V+QV+    H + +  SGQ+++ G   
Sbjct: 2   WGTGFNLC--LGHGSHANEKYP-KPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGL 58

Query: 193 SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG 252
           +   GH +         L    K     Q+  G   + +LT  G +++ G   +G+LG+G
Sbjct: 59  NGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNG 118

Query: 253 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 312
           +  D+ TP  +  L ++  V  +A G +   A TG G+++S+GSG + CLG G++ D L+
Sbjct: 119 ERHDQWTPNLVLRLRDL-VVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLE 177

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPL 370
           P  ++   R+   ++RV+ G+ H +AL   G ++ WG+G   C  LGH  E+      P+
Sbjct: 178 PSLVRL--REEDRIIRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSEVLSPHKLPM 235

Query: 371 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
              ++ +++  C R    ++ +  G ++ FG
Sbjct: 236 PEDRTIVSMS-CGRWHSAYLTI-RGDIFCFG 264



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 6/193 (3%)

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           S+G+G N CLGHG   +E  P+ I++ + KG  V++V+ G +H  AL SSG +Y+WG G 
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIKSLKEKG--VIQVAVGPQHCSALCSSGQIYSWGIGL 58

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
            G LGHG+  D + P+ L+S K +  AVQ+      +  L   G +Y +G    G LG  
Sbjct: 59  NGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNG 118

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
           +R        P ++  LR   VS ++ G   T   T  G LF +G  +   LG       
Sbjct: 119 ER---HDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDR 175

Query: 472 LEPTEIFIQEMEE 484
           LEP+ + ++E + 
Sbjct: 176 LEPSLVRLREEDR 188


>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
          Length = 560

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 171/382 (44%), Gaps = 51/382 (13%)

Query: 105 DIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           D +   AG+  QIT             +F+ G +  G L  G +  +C +   +      
Sbjct: 2   DPLPQFAGDDQQITY------------LFAWGRNKDGELSIGNQK-KCNAPKAVQGLKNQ 48

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR--LVEALKGVPCKQV 222
            V  +S+  NH+  V Q GQ+F CG       G  D N+P + P+  LV+A+KG+   QV
Sbjct: 49  TVQLISSGSNHSGIVTQDGQLFICGSALHGKLGFEDANQPSY-PKFLLVQAMKGLFVTQV 107

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G   T  L   G V+  G   H +LG         P  I  L++  ++VQI  G  + 
Sbjct: 108 ATGDYHTLCLLDNGQVYAWGGTLHKKLGS----KAGKPARIETLKQ--TIVQIGCGDFHS 161

Query: 283 LAVTGNGVVYSFGSG----SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            A++ NG +Y++G G    +   LGHG  +D   P+ ++       ++V+ S G  H++A
Sbjct: 162 AALSANGDLYTWGGGGRDYNRGQLGHGHLNDVETPQIVKD------NIVKFSCGGYHMMA 215

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPE--PLSSLKSHLAVQVCARKRK--------- 387
           LD  G +++WG G  G  G G+  D  LP+   ++  + H+ +     + K         
Sbjct: 216 LDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEIS 275

Query: 388 -----TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                + +L + G VY  G+   G LG       +K    +++  +    + QI+ G  H
Sbjct: 276 LGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQNKF---QLVIGISGKTIVQIAAGWNH 332

Query: 443 TVVVTDRGRLFGFGDNERAQLG 464
           ++V+T    ++  G N+  QLG
Sbjct: 333 SIVLTSHSDVYTCGHNQAGQLG 354



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 145/352 (41%), Gaps = 34/352 (9%)

Query: 117 ITTGRYHT-LLISNSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           I++G  H+ ++  +  +F CGS+L G LG           F  +       V QV+  + 
Sbjct: 53  ISSGSNHSGIVTQDGQLFICGSALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDY 112

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   +L +GQV+  G        H+       +P  +E LK     Q+  G   +  L+ 
Sbjct: 113 HTLCLLDNGQVYAWGGTL-----HKKLGSKAGKPARIETLKQTIV-QIGCGDFHSAALSA 166

Query: 235 RGHVHTCGSN----THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            G ++T G        GQLGHG   D  TP+ +       ++V+ + G  +M+A+  +G 
Sbjct: 167 NGDLYTWGGGGRDYNRGQLGHGHLNDVETPQIVKD-----NIVKFSCGGYHMMALDKDGE 221

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQ-TFRRKGI-------------HVVRVSAGDEHV 336
           ++S+GSG     G GE  D L P+ ++  F +K I              +  +S G  H 
Sbjct: 222 LWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHS 281

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
           + L + G VY  G    G LG     ++   + +  +     VQ+ A    + VL     
Sbjct: 282 LLLSNKGIVYACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHSD 341

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
           VY  G    G LG  D     +  R   L+  R   + Q+  G  H+  + D
Sbjct: 342 VYTCGHNQAGQLGVGDYESRTQYTRINFLEQRR---IKQLFAGGNHSWALID 390



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 63/313 (20%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHG---PETTQCVSFTRINFPSAAHVVQVSA 171
           Q+ TG YHTL L+ N  V++ G +L   LG     P   + +  T         +VQ+  
Sbjct: 106 QVATGDYHTLCLLDNGQVYAWGGTLHKKLGSKAGKPARIETLKQT---------IVQIGC 156

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---------PIFRPRLVEALKGVPCKQV 222
            + H+A +  +G ++T G       G RD NR          +  P++V   K    K  
Sbjct: 157 GDFHSAALSANGDLYTWG------GGGRDYNRGQLGHGHLNDVETPQIV---KDNIVKFS 207

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI---------------APLE 267
             G +    L   G + + GS  +G+ G G+  D   PK +                  +
Sbjct: 208 CGGYHMMA-LDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNK 266

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR------ 321
           +  ++ +I+ G  + L ++  G+VY+ G           QH +L  +A +   +      
Sbjct: 267 QESTIKEISLGGHHSLLLSNKGIVYACGYA---------QHGQLGIKATENQNKFQLVIG 317

Query: 322 -KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
             G  +V+++AG  H + L S   VYT G    G LG GD   +T    ++ L+     Q
Sbjct: 318 ISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQRRIKQ 377

Query: 381 VCARKRKTFVLVD 393
           + A    ++ L+D
Sbjct: 378 LFAGGNHSWALID 390



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 31/268 (11%)

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
           ++   G N  G+L  G+      PK++  L+   +V  I++G ++   VT +G ++  GS
Sbjct: 16  YLFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQ-TVQLISSGSNHSGIVTQDGQLFICGS 74

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             +  LG  + +    P+ +     KG+ V +V+ GD H + L  +G VY WG      L
Sbjct: 75  ALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKL 134

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG----FGSLGFPD 412
           G         P  + +LK  + VQ+      +  L   G +Y +G  G     G LG   
Sbjct: 135 GS----KAGKPARIETLKQTI-VQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLG--- 186

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            G  + V  P+I+      ++ + S G YH + +   G L+ +G     + G    +  L
Sbjct: 187 HGHLNDVETPQIVKD----NIVKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSL 242

Query: 473 EPT--------------EIFIQEMEEDT 486
            P               +IF+Q  +E T
Sbjct: 243 LPKKVKINFNQKHIIIDDIFVQNKQEST 270



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 22/191 (11%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVV--- 167
           N ++ + G YH + L  +  ++S GS + G  G G  + +      +INF +  H++   
Sbjct: 202 NIVKFSCGGYHMMALDKDGELWSWGSGMYGETGQGEFQDSLLPKKVKINF-NQKHIIIDD 260

Query: 168 ------------QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEAL 214
                       ++S   +H+  +   G V+ CG       G + T N+  F+  LV  +
Sbjct: 261 IFVQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQNKFQ--LVIGI 318

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            G    Q+ AG N +  LT    V+TCG N  GQLG GD   R     I  LE+   + Q
Sbjct: 319 SGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQR-RIKQ 377

Query: 275 IAAGPSYMLAV 285
           + AG ++  A+
Sbjct: 378 LFAGGNHSWAL 388



 Score = 40.4 bits (93), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 106 IVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           ++  S    +QI  G  H++ L S+S V++CG +  G LG G   ++   +TRINF    
Sbjct: 315 VIGISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYESRT-QYTRINFLEQR 373

Query: 165 HVVQVSASENHAAFVLQSGQ 184
            + Q+ A  NH+  ++   Q
Sbjct: 374 RIKQLFAGGNHSWALIDYNQ 393


>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
 gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
          Length = 667

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 168/380 (44%), Gaps = 32/380 (8%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQVS 170
           ++  G YHT  L+S+  V+  G    G +G         ++   N P  A     V+ + 
Sbjct: 38  KLVAGYYHTASLVSSGDVYVWGQGDRGQIGD-------AAWNARNTPVQARGLNDVMDIH 90

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
                   +   G V+T G N +   G   T      P  V  L G+  K ++ GL +  
Sbjct: 91  TGVRSTMALRSDGTVWTWGSNENGQLGIGTTADKNV-PTPVSGLSGI--KAISGGLGYHS 147

Query: 231 F-LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT  G V T G N +G+LG+G T+ + +P  +  L +V     IAAG  Y LA+  +G
Sbjct: 148 MALTENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSDV---TAIAAGGYYSLALKSDG 204

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            ++++G+  N  LG G   D+  P  +         V+ ++AG  H +A+   G V+ WG
Sbjct: 205 TIWAWGANGNGELGDGTIVDKHTPVQVSGLS----DVIAITAGGSHSLAIKQDGTVWAWG 260

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               G LG G   ++T+P  + +L+ H+   +      +  L   G+V+G+G    G LG
Sbjct: 261 INMYGTLGDGTRTNRTIPVKVRNLQ-HIKA-IAGGGHHSLALDQEGNVWGWGDNSRGQLG 318

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
               G +     P  L  +   HV  I+ G +H+  +   GR++G+G N   Q+G  T  
Sbjct: 319 L---GHNSSRTTPEQLTGI--EHVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRN 373

Query: 470 GCLEP--TEIFIQEMEEDTG 487
               P  T+  +     DTG
Sbjct: 374 DRNAPALTKAVLDTTAPDTG 393



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 141/299 (47%), Gaps = 21/299 (7%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           M I TG   T+ L S+ +V++ GS+  G LG G    + V  T ++  S    +      
Sbjct: 87  MDIHTGVRSTMALRSDGTVWTWGSNENGQLGIGTTADKNVP-TPVSGLSGIKAISGGLGY 145

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
            H+  + ++G V+T G N +   G+  T   N P+    LV  L  V    + AG  ++ 
Sbjct: 146 -HSMALTENGTVWTWGKNDNGELGNGTTVQQNSPV----LVIGLSDVTA--IAAGGYYSL 198

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            L   G +   G+N +G+LG G  +D+ TP  ++ L +V   + I AG S+ LA+  +G 
Sbjct: 199 ALKSDGTIWAWGANGNGELGDGTIVDKHTPVQVSGLSDV---IAITAGGSHSLAIKQDGT 255

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+++G      LG G + +   P  ++  +    H+  ++ G  H +ALD  G V+ WG 
Sbjct: 256 VWAWGINMYGTLGDGTRTNRTIPVKVRNLQ----HIKAIAGGGHHSLALDQEGNVWGWGD 311

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
              G LG G    +T PE L+ ++  L   +      +  L   G V+G+G    G +G
Sbjct: 312 NSRGQLGLGHNSSRTTPEQLTGIEHVL--DIAGGGFHSAALKKDGRVWGWGLNSSGQIG 368


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 145/307 (47%), Gaps = 25/307 (8%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
           +++S  + H A V ++G++F  G N+      G + T   + +P  V+ALK    K    
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT---VNKPTCVKALKSERVKLTAC 95

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   T   T RG+++ CG N  GQLG GD  DR +   +    + G +  +AAG +   A
Sbjct: 96  GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAA 155

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +T +G +Y +G  S   +G G++ + L P+ +   +R    V  VS G  H   +   G 
Sbjct: 156 LTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDGA 211

Query: 345 VYTWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           +YT+G+   G LG   E   +  +P+ ++ +   + VQV      T  L +   VY FG 
Sbjct: 212 LYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV-VQVACGGGHTVALTE-NEVYSFGL 269

Query: 403 MGFGSLG-----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
             FG LG     F  R        PR+++  R   V   + G  HT ++TD G L+ FGD
Sbjct: 270 GQFGQLGHGTFIFESR-------LPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGD 322

Query: 458 NERAQLG 464
               +LG
Sbjct: 323 GRHGKLG 329



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 161/348 (46%), Gaps = 37/348 (10%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS-----AAHVVQ 168
           ++I+ G  HT L++ N  +F  GS+  G LG G +TT       +N P+      +  V+
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT-------VNKPTCVKALKSERVK 91

Query: 169 VSA-SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAG 225
           ++A    H       G ++ CG N+    G  D N R  F   LVE   K  P K + AG
Sbjct: 92  LTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAG 149

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLA 284
            N +  LT  G ++  G N+ GQ+G G   +  TP+ ++    VG  V  ++ G  +   
Sbjct: 150 SNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAF 205

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           VT +G +Y+FG   +  LG   +   +   P+ +     +   VV+V+ G  H VAL + 
Sbjct: 206 VTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL-TE 261

Query: 343 GYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             VY++G G  G LGHG  I +  LP  +   +          +  T ++ D G +Y FG
Sbjct: 262 NEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFG 321

Query: 402 WMGFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGLYHTVVV 446
               G LG  +   +++    L PR LD    +HV  ++ G  H +V+
Sbjct: 322 DGRHGKLGLGEENFTNQFKPTLCPRFLD----YHVHSVTCGGCHMLVL 365



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 16/192 (8%)

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V++FG  S F              A   F  K    +R+S GDEH   +  +G ++ +
Sbjct: 13  GAVFTFGK-SKFA-----------DNAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMF 60

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G LG G +     P  + +LKS  + +  C R   T V    G++Y  G    G 
Sbjct: 61  GSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTH-TLVFTSRGNLYACGGNNEGQ 119

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  D   +D+     +    +   +  ++ G   +  +T  GRL+ +GDN   Q+G   
Sbjct: 120 LGLGD--CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGK 177

Query: 468 LRGCLEPTEIFI 479
               L P E+ +
Sbjct: 178 ESNALTPQEVSV 189



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 8/198 (4%)

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
           ++I+ G  +   VT NG ++ FGS +   LG G +    +P  ++  + + + +   + G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLT--ACG 96

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT-FVL 391
             H +   S G +Y  G    G LG GD  D+T    +        +++ A    T   L
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
              G +Y +G    G +G    G     L P+ +       V  +S G YH+  VT  G 
Sbjct: 157 TQDGRLYMWGDNSEGQIGL---GKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVDGA 211

Query: 452 LFGFGDNERAQLGHDTLR 469
           L+ FG+ +  +LG  T +
Sbjct: 212 LYTFGEKDSGKLGLSTEK 229


>gi|268569112|ref|XP_002640436.1| Hypothetical protein CBG08488 [Caenorhabditis briggsae]
          Length = 985

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 139/302 (46%), Gaps = 18/302 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V+  E H  F+ +  ++++ G N     G    +   F    V    GV   Q+ AG
Sbjct: 12  VKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGVGIVQIAAG 71

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
              +  +   G V   GSN HGQLG  +T+  +  PK I  L EV   VQ+A+G  + +A
Sbjct: 72  RAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEV---VQVASGSDHCIA 128

Query: 285 VTGNGVVYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           +T +G VY +G  ++  C+ H E  + L            I +VRV AG  H VA+ +SG
Sbjct: 129 LTEDGRVYVWGEQADGRCIHHPELVEHLN----------AIPIVRVEAGARHCVAISASG 178

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            V+TWG+   G LG  D   +T    ++ +     V+       T +L   G  + FG  
Sbjct: 179 AVFTWGQNNSGELGMDDFRPQTSVHHVTQMDGLGVVEAACGDNHTILLTHCGRTFSFGSD 238

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G  GF  +   +K   P  +  L   HV++I+ G  HT+ +  RG  + FG N   QL
Sbjct: 239 ALGQCGFGKK--LEKRPNPTAVSDLIGSHVTRIAAGACHTIAII-RGSPYPFGLNSSGQL 295

Query: 464 GH 465
           G+
Sbjct: 296 GN 297



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 152/343 (44%), Gaps = 30/343 (8%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  HT+ ++ +  ++S GS++ G LG G  +    S   ++  S   +VQ++A   H
Sbjct: 15  VACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTSGVGIVQIAAGRAH 74

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  V   G+VF  G N     G  +T      P+ +  L  V   QV +G +    LT  
Sbjct: 75  SLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNEV--VQVASGSDHCIALTED 132

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V+  G    G+  H        P+ +  L  +  +V++ AG  + +A++ +G V+++G
Sbjct: 133 GRVYVWGEQADGRCIH-------HPELVEHLNAI-PIVRVEAGARHCVAISASGAVFTWG 184

Query: 296 SGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
             ++  LG     D+ +P+       +  G+ VV  + GD H + L   G  +++G    
Sbjct: 185 QNNSGELG----MDDFRPQTSVHHVTQMDGLGVVEAACGDNHTILLTHCGRTFSFGSDAL 240

Query: 354 GALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
           G  G G +++K   P  +S L      ++ A    T  ++  GS Y FG    G LG   
Sbjct: 241 GQCGFGKKLEKRPNPTAVSDLIGSHVTRIAAGACHTIAII-RGSPYPFGLNSSGQLG--- 296

Query: 413 RGVSDKVL---RPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
              + K++    PR  D L   HV+ +  G + T  +   G +
Sbjct: 297 ---NGKIMTQSTPRKTDDL--DHVTAVFAGYHQTFFIRSAGSI 334



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 100/211 (47%), Gaps = 21/211 (9%)

Query: 264 APLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD---ELQPRAIQTF 319
           AP +  G+ V+ +A G  + + +T +  ++S GS  +  LG G++ +    + P ++ + 
Sbjct: 3   APNDADGTAVKAVACGEQHTIFLTKDRKMWSVGSNVDGQLGRGKRSEGSFSIYPVSLTS- 61

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLA 378
              G+ +V+++AG  H +A+   G V+ WG    G LG  + I  + +P+ ++ L     
Sbjct: 62  ---GVGIVQIAAGRAHSLAVADDGRVFAWGSNEHGQLGMENTITWQEMPKRINQLNE--V 116

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
           VQV +       L + G VY +G    G            +  P +++ L A  + ++  
Sbjct: 117 VQVASGSDHCIALTEDGRVYVWGEQADGRC----------IHHPELVEHLNAIPIVRVEA 166

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
           G  H V ++  G +F +G N   +LG D  R
Sbjct: 167 GARHCVAISASGAVFTWGQNNSGELGMDDFR 197


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           FC G   T+    + R      G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-TVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 19/297 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G  + +GS S+  L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 153/316 (48%), Gaps = 17/316 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           VV+++  + H+A V +SG+++  G N       GH    + + +P  V+ LK    ++V 
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHT---KSLNKPSFVKPLKPEKVRKVA 96

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G N T   +  G + + G N  GQLGH D  +   PK I  + ++  + QIA G  + +
Sbjct: 97  CGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQM-EIKQIACGTYHSI 155

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            ++ +G VY +G+ +   LG GE+ +   P+ ++ F+++   VV VS G  H   +   G
Sbjct: 156 ILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLK-FKKE---VVSVSCGYYHTALVTRDG 211

Query: 344 YVYTWGKGYCGALGHGDE--IDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           ++YT+G+   G LG       + T+P+ ++    +   + V    R T  +   G  Y +
Sbjct: 212 FLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAW 271

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G    G LG   + +  +V  P+ +  L       +S G  HT VVT+ G++F FGD   
Sbjct: 272 GDGSQGQLGHGTKLL--EVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRH 329

Query: 461 AQLGH--DTLRGCLEP 474
            +LG   D+     +P
Sbjct: 330 GKLGQGEDSFSNSFDP 345



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 6/258 (2%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           ++  G   +  +T  G ++  GSN  GQLG G T     P  + PL+    V ++A G +
Sbjct: 42  EMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLK-PEKVRKVACGRN 100

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +  + +G ++SFG   +  LGH ++ +EL P+ I++  +  + + +++ G  H + L 
Sbjct: 101 HTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQ--MEIKQIACGTYHSIILS 158

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G VY WG    G LG G+E++ +LP+ L   K  ++V  C       V  D G +Y F
Sbjct: 159 EDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKEVVSVS-CGYYHTALVTRD-GFLYTF 216

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G    G LG     +S+  +   +           +S G  HTV +T +G  + +GD  +
Sbjct: 217 GENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQ 276

Query: 461 AQLGHDT-LRGCLEPTEI 477
            QLGH T L    EP +I
Sbjct: 277 GQLGHGTKLLEVNEPKQI 294



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 164/363 (45%), Gaps = 19/363 (5%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSAS 172
           +++  G  H+ +++ S  ++  GS+  G LG G  ++    SF +   P    V +V+  
Sbjct: 41  VEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEK--VRKVACG 98

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            NH     +SG++F+ G N     GH D    +  P+ +E++  +  KQ+  G   +  L
Sbjct: 99  RNHTIVYSESGKLFSFGCNEDGQLGHVDKENELL-PKEIESIPQMEIKQIACGTYHSIIL 157

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           +  G V+  G+N  GQLG G+ ++   PK +   +E   VV ++ G  +   VT +G +Y
Sbjct: 158 SEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKE---VVSVSCGYYHTALVTRDGFLY 214

Query: 293 SFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           +FG        L   +  +   P+++          + VS G  H VA+   G+ Y WG 
Sbjct: 215 TFGENELGKLGLSSSQLSNTTVPQSV-AMPADNDEYISVSCGARHTVAITKQGHCYAWGD 273

Query: 351 GYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           G  G LGHG + ++   P+ +  L     + V   +  T V+ ++G V+ FG    G LG
Sbjct: 274 GSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLG 333

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
             +   S+    P  L      +V  +S G  HT+V+        F D      G ++LR
Sbjct: 334 QGEDSFSN-SFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFVD------GENSLR 386

Query: 470 GCL 472
             +
Sbjct: 387 ASM 389



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 3/146 (2%)

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
           F  K   VV ++ GDEH   +  SG +Y +G    G LG G       P  +  LK    
Sbjct: 33  FWIKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKV 92

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
            +V   +  T V  ++G ++ FG    G LG  D+   +  L P+ ++S+    + QI+ 
Sbjct: 93  RKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDK---ENELLPKEIESIPQMEIKQIAC 149

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLG 464
           G YH++++++ G ++ +G+N   QLG
Sbjct: 150 GTYHSIILSEDGDVYVWGNNNEGQLG 175



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%)

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           +K+   V++      + V+ ++G +Y FG   +G LG    G +  + +P  +  L+   
Sbjct: 35  IKNDGVVEMACGDEHSAVVTESGRLYVFGSNDWGQLGL---GHTKSLNKPSFVKPLKPEK 91

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI-FIQEME 483
           V +++ G  HT+V ++ G+LF FG NE  QLGH      L P EI  I +ME
Sbjct: 92  VRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQME 143


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           FC G   T+    + R      G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG---TDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
                 P+ I  LE + +V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-TVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKITTL--NGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLTVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 132/297 (44%), Gaps = 19/297 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G  + +GS S+  L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
           DW4/3-1]
          Length = 860

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 171/383 (44%), Gaps = 42/383 (10%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL L  + +V++ G +  G LG+G  T +    T +  P    V+ V+ASE H+  +  
Sbjct: 155 HTLALRRDGTVWAWGFNGSGQLGNGTATDRA---TPVQVPGLTSVMAVAASEAHSLALRS 211

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF------LTIR 235
            G V+  GDN     G   T      P  V  L GV    + AG N T        L +R
Sbjct: 212 DGTVWAWGDNGYGQLGD-GTKAQRTTPVQVLGLAGVTA--LAAGGNGTTVAISAHSLALR 268

Query: 236 --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N+ GQLG G T +R TP  +  L    SV  +AAG  + LA+  +G V++
Sbjct: 269 SDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLT---SVTALAAGAFHSLALRDDGTVWA 325

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD-------EHVVALDSSGYVY 346
           +G+ S+  LG G      +P  +Q      +  V    GD       +H +AL S G V+
Sbjct: 326 WGNNSSGQLGDGTT--TARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVW 383

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
            WG       G G    +T P  +S L    A  + A      VL   G+V+ +G    G
Sbjct: 384 AWGYNLSRQFGDGMPATRTTPVQVSELTGGTA--LVAGDLHAVVLKSDGTVWAWGDNSSG 441

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG    GV+    +P  +  L A  ++ ++TG  H+V V   G ++ +GDN R QLG  
Sbjct: 442 QLG---EGVTPVRAKPMQVSGLAA--ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGI- 495

Query: 467 TLRGCLEPTEIFIQEMEEDTGLA 489
              G     EI +Q     TGLA
Sbjct: 496 ---GITATREIPVQA----TGLA 511



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 157/363 (43%), Gaps = 23/363 (6%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H +++ S+ +V++ G +  G LG G      V    +     A +  ++  + H
Sbjct: 416 LVAGDLHAVVLKSDGTVWAWGDNSSGQLGEG---VTPVRAKPMQVSGLAAITALATGDGH 472

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  V   G ++  GDN     G   T     R   V+A        + AG + +  L   
Sbjct: 473 SVAVGSDGGIWAWGDNRRGQLGIGIT---ATREIPVQATGLASISALAAGDSHSLALRGN 529

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V T GSN +GQLG G  +DR T   +  L ++     +AAG  + LA+  +G V+ +G
Sbjct: 530 GSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDI---TALAAGNHHSLALRNDGTVWVWG 586

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 354
           S     LG G       P      +  G+  +R V AG  H VA+  +G V+ WG    G
Sbjct: 587 SNDFGQLGDGTVTSRKTP-----VQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 641

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG G    + +P  +S L    AV V      +  L + G+++ +G+   G LG    G
Sbjct: 642 QLGDGTVTSRAMPVQVSGLTGVTAVAVGV--YHSLALRNDGTLWAWGYNNVGQLGNGTSG 699

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           +      P  +  L    V  ++ G  H++ +   G ++G+G N   QLG  T      P
Sbjct: 700 IQST---PAQVPGLTG--VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTP 754

Query: 475 TEI 477
           T++
Sbjct: 755 TQV 757



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 162/373 (43%), Gaps = 34/373 (9%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE-- 173
           +  G +H+L L  + +V++ G++  G LG G  T +    T +  P    V+ V+A    
Sbjct: 307 LAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARP---TPVQVPGLTSVIAVAAGGGD 363

Query: 174 -------NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
                  +H+  +   G V+  G N S   G      P  R   V+  +      + AG 
Sbjct: 364 DSLGMRGDHSLALKSDGTVWAWGYNLSRQFGD---GMPATRTTPVQVSELTGGTALVAGD 420

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
                L   G V   G N+ GQLG G T  R  P  ++ L    ++  +A G  + +AV 
Sbjct: 421 LHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLA---AITALATGDGHSVAVG 477

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++++G      LG G       P  +Q      I  +  +AGD H +AL  +G V+
Sbjct: 478 SDGGIWAWGDNRRGQLGIGITATREIP--VQATGLASISAL--AAGDSHSLALRGNGSVW 533

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           TWG    G LG G  ID+     +  L    A  + A    +  L + G+V+ +G   FG
Sbjct: 534 TWGSNAYGQLGDGTAIDRATAAQVPGLTDITA--LAAGNHHSLALRNDGTVWVWGSNDFG 591

Query: 407 SLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            LG  D  V+ +    ++  L ++RA     +  G  H+V V   G ++ +G+N+  QLG
Sbjct: 592 QLG--DGTVTSRKTPVQVSGLSAMRA-----VEAGPAHSVAVHLNGTVWVWGNNDFGQLG 644

Query: 465 HDTLRGCLEPTEI 477
             T+     P ++
Sbjct: 645 DGTVTSRAMPVQV 657



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 157/362 (43%), Gaps = 21/362 (5%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           + TG  H++ + S+  +++ G +  G LG G   T+ +          A +  ++A ++H
Sbjct: 466 LATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGL---ASISALAAGDSH 522

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  +  +G V+T G N     G       I R    +         + AG + +  L   
Sbjct: 523 SLALRGNGSVWTWGSN---AYGQLGDGTAIDRATAAQVPGLTDITALAAGNHHSLALRND 579

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   GSN  GQLG G    R TP  ++ L  + +V    AGP++ +AV  NG V+ +G
Sbjct: 580 GTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAV---EAGPAHSVAVHLNGTVWVWG 636

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           +     LG G       P  +Q     G+  V V  G  H +AL + G ++ WG    G 
Sbjct: 637 NNDFGQLGDGTVTSRAMP--VQVSGLTGVTAVAV--GVYHSLALRNDGTLWAWGYNNVGQ 692

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG+G    ++ P  +  L   +A+   A    +  L   G+V+G+G   FG LG    G 
Sbjct: 693 LGNGTSGIQSTPAQVPGLTGVIAL--AAGNGHSLALRTDGTVWGWGANSFGQLG---DGT 747

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           +     P  +  L   +V  ++ G ++TV +     ++ +G     QLG  T+     P 
Sbjct: 748 TTPRSTPTQVPGLT--NVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPV 805

Query: 476 EI 477
           ++
Sbjct: 806 QV 807



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 159/379 (41%), Gaps = 33/379 (8%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           + GN   +    +   L S+ +V++ G +  G LG G  T +      +   S   V  +
Sbjct: 251 AGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTS---VTAL 307

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNF 228
           +A   H+  +   G V+  G+NSS   G   T  RP   P  V  L  V       G + 
Sbjct: 308 AAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARPT--PVQVPGLTSVIAVAAGGGDDS 365

Query: 229 TGF-------LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            G        L   G V   G N   Q G G    R TP  ++ L    ++V   AG  +
Sbjct: 366 LGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALV---AGDLH 422

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +  +G V+++G  S+  LG G      +P  +         +  ++ GD H VA+ S
Sbjct: 423 AVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGL----AAITALATGDGHSVAVGS 478

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G ++ WG    G LG G    + +P   + L S  A  + A    +  L   GSV+ +G
Sbjct: 479 DGGIWAWGDNRRGQLGIGITATREIPVQATGLASISA--LAAGDSHSLALRGNGSVWTWG 536

Query: 402 WMGFGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
              +G LG     DR  + +V  P + D      ++ ++ G +H++ + + G ++ +G N
Sbjct: 537 SNAYGQLGDGTAIDRATAAQV--PGLTD------ITALAAGNHHSLALRNDGTVWVWGSN 588

Query: 459 ERAQLGHDTLRGCLEPTEI 477
           +  QLG  T+     P ++
Sbjct: 589 DFGQLGDGTVTSRKTPVQV 607



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 159/364 (43%), Gaps = 25/364 (6%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H+L L  N SV++ GS+  G LG G   T     T    P    +  ++A  +H
Sbjct: 516 LAAGDSHSLALRGNGSVWTWGSNAYGQLGDG---TAIDRATAAQVPGLTDITALAAGNHH 572

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           +  +   G V+  G N     G    T+R    P  V  L  +  + V AG   +  + +
Sbjct: 573 SLALRNDGTVWVWGSNDFGQLGDGTVTSRKT--PVQVSGLSAM--RAVEAGPAHSVAVHL 628

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G+N  GQLG G    R  P  ++ L     V  +A G  + LA+  +G ++++
Sbjct: 629 NGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLT---GVTAVAVGVYHSLALRNDGTLWAW 685

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G  +   LG+G    +  P  +         V+ ++AG+ H +AL + G V+ WG    G
Sbjct: 686 GYNNVGQLGNGTSGIQSTPAQVPGL----TGVIALAAGNGHSLALRTDGTVWGWGANSFG 741

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG G    ++ P  +  L + +A+   A    T  L    SV+ +G    G LG  D  
Sbjct: 742 QLGDGTTTPRSTPTQVPGLTNVIALNAGA--FYTVALRSERSVWEWGSKSAGQLG--DGT 797

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLGHDTLRGCLE 473
           V+ K   P  +  L    V+ ++ G  H + + TDR  ++ +G N+R Q+G  T      
Sbjct: 798 VTQKT-TPVQVSGLT--DVTALAAGNAHALALRTDR-TVWAWGGNQRGQIGDGTASIMPA 853

Query: 474 PTEI 477
           P  +
Sbjct: 854 PVNV 857



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 131/327 (40%), Gaps = 36/327 (11%)

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VSA+ +H   + + G V+  G N S   G+    D   P+  P L   +       V A 
Sbjct: 149 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMA------VAAS 202

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--------GSVVQIAA 277
              +  L   G V   G N +GQLG G    R TP  +  L  V        G+ V I+A
Sbjct: 203 EAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISA 262

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
              + LA+  +G V+++G  S   LG G   +   P  +         V  ++AG  H +
Sbjct: 263 ---HSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGL----TSVTALAAGAFHSL 315

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA-------RKRKTFV 390
           AL   G V+ WG    G LG G    +  P  +  L S +AV           R   +  
Sbjct: 316 ALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLA 375

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L   G+V+ +G+    S  F D G+      P  +  L     + +  G  H VV+   G
Sbjct: 376 LKSDGTVWAWGYN--LSRQFGD-GMPATRTTPVQVSELTGG--TALVAGDLHAVVLKSDG 430

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            ++ +GDN   QLG        +P ++
Sbjct: 431 TVWAWGDNSSGQLGEGVTPVRAKPMQV 457



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 13/198 (6%)

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
           P   V+A  + T  L   G V   G N  GQLG+G   DR TP  +  L    SV+ +AA
Sbjct: 145 PAPAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLT---SVMAVAA 201

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS------A 331
             ++ LA+  +G V+++G      LG G +     P  +Q     G+  +         A
Sbjct: 202 SEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVA 259

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
              H +AL S G V+ WG    G LG G   ++  P  +  L S  A  + A    +  L
Sbjct: 260 ISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTSVTA--LAAGAFHSLAL 317

Query: 392 VDTGSVYGFGWMGFGSLG 409
            D G+V+ +G    G LG
Sbjct: 318 RDDGTVWAWGNNSSGQLG 335


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 149/323 (46%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H A   + G+VF  G+      GH  T+  I RP+LVEAL     + +  G
Sbjct: 257 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGH-GTDADISRPKLVEALAVSNVEYIACG 315

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++T G   +  G LG+G       PK ++ PLE V  V+ ++ G  + 
Sbjct: 316 EFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGV-QVLSVSCGSWHS 374

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DS 341
              T +G V++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+ +S
Sbjct: 375 ALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEAL--SGFRTMKVACGLWHSAAIVES 432

Query: 342 SGYV---------YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           S +V         YTWG G    LGHGD+  + +P  + SL  +   QV      T  L 
Sbjct: 433 SNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGHSMTIALS 492

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G    G LG P    SD      + D L    V +IS G  H  V+T R  +
Sbjct: 493 TSGHVFTMGSSSNGQLGNPK---SDGKQPIPVQDRLSGELVEEISCGSCHVAVLTSRSEV 549

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH  +    +PT
Sbjct: 550 YTWGMGANGRLGHGGVEDKKKPT 572



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 144/305 (47%), Gaps = 25/305 (8%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP 161
           +VE  A + ++ I  G +HT  ++ S  +++ G      G+LG+G   +  +   R++ P
Sbjct: 300 LVEALAVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLP-KRVSGP 358

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGVP 218
                V+ VS    H+A    SG+VFT GD +    GH  R+T   +  P+ VEAL G  
Sbjct: 359 LEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGKRET---VGYPKEVEALSGFR 415

Query: 219 CKQVTAGL----------NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
             +V  GL          N      I   ++T G+    QLGHGD   R  P  +  L +
Sbjct: 416 TMKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLID 475

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
             S  Q+A G S  +A++ +G V++ GS SN  LG+  + D  QP  +Q  R  G  V  
Sbjct: 476 Y-SFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGN-PKSDGKQPIPVQD-RLSGELVEE 532

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRK 387
           +S G  HV  L S   VYTWG G  G LGHG   DK  P  + +LK  H+    C     
Sbjct: 533 ISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFT 592

Query: 388 TFVLV 392
           T + +
Sbjct: 593 TCICI 597



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 21/287 (7%)

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           ++++ C   D    I  P+ +E+   +  +Q+  G       T +G V   G    G+LG
Sbjct: 233 STNYLCSKAD----ILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLG 288

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SNFCLGHGEQH 308
           HG   D   PK +  L  V +V  IA G  +  AVT +G +Y++G G  +   LG+G   
Sbjct: 289 HGTDADISRPKLVEAL-AVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGA 347

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
               P+ + +   +G+ V+ VS G  H     SSG V+T+G G  GALGHG       P+
Sbjct: 348 SHWLPKRV-SGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPK 406

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGS----------VYGFGWMGFGSLGFPDRGVSDK 418
            + +L     ++V      +  +V++ +          +Y +G      LG  D+   D 
Sbjct: 407 EVEALSGFRTMKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDK---DS 463

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            L P  + SL  +   Q++ G   T+ ++  G +F  G +   QLG+
Sbjct: 464 RLVPTCVQSLIDYSFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGN 510



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 8/201 (3%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  Y+       V+ + GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 215 GDVYVWGEVWTDVIPAEGSTNYLC----SKADILIPKPLES--DVVLDVQQIACGYRHIA 268

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
                G V+ WG+   G LGHG + D + P+ + +L       +   +  T  +  +G +
Sbjct: 269 LTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGEFHTCAVTASGDL 328

Query: 398 YGFGWMGFGSLGFPDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           Y +G  G+ ++G    G  +   L  R+   L    V  +S G +H+ + T  G++F FG
Sbjct: 329 YTWG-DGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFG 387

Query: 457 DNERAQLGHDTLRGCLEPTEI 477
           D     LGH        P E+
Sbjct: 388 DGTFGALGHGKRETVGYPKEV 408


>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 859

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 171/383 (44%), Gaps = 42/383 (10%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL L  + +V++ G +  G LG+G  T +    T +  P    V+ V+ASE H+  +  
Sbjct: 154 HTLALRRDGTVWAWGFNGSGQLGNGTATDRA---TPVQVPGLTSVMAVAASEAHSLALRS 210

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF------LTIR 235
            G V+  GDN     G   T      P  V  L GV    + AG N T        L +R
Sbjct: 211 DGTVWAWGDNGYGQLGD-GTKAQRTTPVQVLGLAGVTA--LAAGGNGTTVAISAHSLALR 267

Query: 236 --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N+ GQLG G T +R TP  +  L    SV  +AAG  + LA+  +G V++
Sbjct: 268 SDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLT---SVTALAAGAFHSLALRDDGTVWA 324

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD-------EHVVALDSSGYVY 346
           +G+ S+  LG G      +P  +Q      +  V    GD       +H +AL S G V+
Sbjct: 325 WGNNSSGQLGDGTT--TARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVW 382

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
            WG       G G    +T P  +S L    A  + A      VL   G+V+ +G    G
Sbjct: 383 AWGYNLSRQFGDGMPATRTTPVQVSELTGGTA--LVAGDLHAVVLKSDGTVWAWGDNSSG 440

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG    GV+    +P  +  L A  ++ ++TG  H+V V   G ++ +GDN R QLG  
Sbjct: 441 QLG---EGVTPVRAKPMQVSGLAA--ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGI- 494

Query: 467 TLRGCLEPTEIFIQEMEEDTGLA 489
              G     EI +Q     TGLA
Sbjct: 495 ---GITATREIPVQA----TGLA 510



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 157/363 (43%), Gaps = 23/363 (6%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H +++ S+ +V++ G +  G LG G      V    +     A +  ++  + H
Sbjct: 415 LVAGDLHAVVLKSDGTVWAWGDNSSGQLGEG---VTPVRAKPMQVSGLAAITALATGDGH 471

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  V   G ++  GDN     G   T     R   V+A        + AG + +  L   
Sbjct: 472 SVAVGSDGGIWAWGDNRRGQLGIGIT---ATREIPVQATGLASISALAAGDSHSLALRGN 528

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V T GSN +GQLG G  +DR T   +  L ++     +AAG  + LA+  +G V+ +G
Sbjct: 529 GSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTDI---TALAAGNHHSLALRNDGTVWVWG 585

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 354
           S     LG G       P      +  G+  +R V AG  H VA+  +G V+ WG    G
Sbjct: 586 SNDFGQLGDGTVTSRKTP-----VQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 640

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG G    + +P  +S L    AV V      +  L + G+++ +G+   G LG    G
Sbjct: 641 QLGDGTVTSRAMPVQVSGLTGVTAVAVGV--YHSLALRNDGTLWAWGYNNVGQLGNGTSG 698

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           +      P  +  L    V  ++ G  H++ +   G ++G+G N   QLG  T      P
Sbjct: 699 IQST---PAQVPGLTG--VIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTP 753

Query: 475 TEI 477
           T++
Sbjct: 754 TQV 756



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 162/373 (43%), Gaps = 34/373 (9%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE-- 173
           +  G +H+L L  + +V++ G++  G LG G  T +    T +  P    V+ V+A    
Sbjct: 306 LAAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARP---TPVQVPGLTSVIAVAAGGGD 362

Query: 174 -------NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
                  +H+  +   G V+  G N S   G      P  R   V+  +      + AG 
Sbjct: 363 DSLGMRGDHSLALKSDGTVWAWGYNLSRQFGD---GMPATRTTPVQVSELTGGTALVAGD 419

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
                L   G V   G N+ GQLG G T  R  P  ++ L    ++  +A G  + +AV 
Sbjct: 420 LHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLA---AITALATGDGHSVAVG 476

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++++G      LG G       P  +Q      I  +  +AGD H +AL  +G V+
Sbjct: 477 SDGGIWAWGDNRRGQLGIGITATREIP--VQATGLASISAL--AAGDSHSLALRGNGSVW 532

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           TWG    G LG G  ID+     +  L    A  + A    +  L + G+V+ +G   FG
Sbjct: 533 TWGSNAYGQLGDGTAIDRATAAQVPGLTDITA--LAAGNHHSLALRNDGTVWVWGSNDFG 590

Query: 407 SLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            LG  D  V+ +    ++  L ++RA     +  G  H+V V   G ++ +G+N+  QLG
Sbjct: 591 QLG--DGTVTSRKTPVQVSGLSAMRA-----VEAGPAHSVAVHLNGTVWVWGNNDFGQLG 643

Query: 465 HDTLRGCLEPTEI 477
             T+     P ++
Sbjct: 644 DGTVTSRAMPVQV 656



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 157/362 (43%), Gaps = 21/362 (5%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           + TG  H++ + S+  +++ G +  G LG G   T+ +          A +  ++A ++H
Sbjct: 465 LATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITATREIPVQATGL---ASISALAAGDSH 521

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  +  +G V+T G N     G       I R    +         + AG + +  L   
Sbjct: 522 SLALRGNGSVWTWGSN---AYGQLGDGTAIDRATAAQVPGLTDITALAAGNHHSLALRND 578

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   GSN  GQLG G    R TP  ++ L  + +V    AGP++ +AV  NG V+ +G
Sbjct: 579 GTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAMRAV---EAGPAHSVAVHLNGTVWVWG 635

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           +     LG G       P  +Q     G+  V V  G  H +AL + G ++ WG    G 
Sbjct: 636 NNDFGQLGDGTVTSRAMP--VQVSGLTGVTAVAV--GVYHSLALRNDGTLWAWGYNNVGQ 691

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG+G    ++ P  +  L   +A+   A    +  L   G+V+G+G   FG LG    G 
Sbjct: 692 LGNGTSGIQSTPAQVPGLTGVIAL--AAGNGHSLALRTDGTVWGWGANSFGQLG---DGT 746

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           +     P  +  L   +V  ++ G ++TV +     ++ +G     QLG  T+     P 
Sbjct: 747 TTPRSTPTQVPGLT--NVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTPV 804

Query: 476 EI 477
           ++
Sbjct: 805 QV 806



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 159/379 (41%), Gaps = 33/379 (8%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           + GN   +    +   L S+ +V++ G +  G LG G  T +      +   S   V  +
Sbjct: 250 AGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTS---VTAL 306

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNF 228
           +A   H+  +   G V+  G+NSS   G   T  RP   P  V  L  V       G + 
Sbjct: 307 AAGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARPT--PVQVPGLTSVIAVAAGGGDDS 364

Query: 229 TGF-------LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            G        L   G V   G N   Q G G    R TP  ++ L    ++V   AG  +
Sbjct: 365 LGMRGDHSLALKSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALV---AGDLH 421

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            + +  +G V+++G  S+  LG G      +P  +         +  ++ GD H VA+ S
Sbjct: 422 AVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGL----AAITALATGDGHSVAVGS 477

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            G ++ WG    G LG G    + +P   + L S  A  + A    +  L   GSV+ +G
Sbjct: 478 DGGIWAWGDNRRGQLGIGITATREIPVQATGLASISA--LAAGDSHSLALRGNGSVWTWG 535

Query: 402 WMGFGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
              +G LG     DR  + +V  P + D      ++ ++ G +H++ + + G ++ +G N
Sbjct: 536 SNAYGQLGDGTAIDRATAAQV--PGLTD------ITALAAGNHHSLALRNDGTVWVWGSN 587

Query: 459 ERAQLGHDTLRGCLEPTEI 477
           +  QLG  T+     P ++
Sbjct: 588 DFGQLGDGTVTSRKTPVQV 606



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 159/364 (43%), Gaps = 25/364 (6%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H+L L  N SV++ GS+  G LG G   T     T    P    +  ++A  +H
Sbjct: 515 LAAGDSHSLALRGNGSVWTWGSNAYGQLGDG---TAIDRATAAQVPGLTDITALAAGNHH 571

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           +  +   G V+  G N     G    T+R    P  V  L  +  + V AG   +  + +
Sbjct: 572 SLALRNDGTVWVWGSNDFGQLGDGTVTSRKT--PVQVSGLSAM--RAVEAGPAHSVAVHL 627

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G+N  GQLG G    R  P  ++ L     V  +A G  + LA+  +G ++++
Sbjct: 628 NGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLT---GVTAVAVGVYHSLALRNDGTLWAW 684

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G  +   LG+G    +  P  +         V+ ++AG+ H +AL + G V+ WG    G
Sbjct: 685 GYNNVGQLGNGTSGIQSTPAQVPGL----TGVIALAAGNGHSLALRTDGTVWGWGANSFG 740

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG G    ++ P  +  L + +A+   A    T  L    SV+ +G    G LG  D  
Sbjct: 741 QLGDGTTTPRSTPTQVPGLTNVIALNAGA--FYTVALRSERSVWEWGSKSAGQLG--DGT 796

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFGDNERAQLGHDTLRGCLE 473
           V+ K   P  +  L    V+ ++ G  H + + TDR  ++ +G N+R Q+G  T      
Sbjct: 797 VTQKT-TPVQVSGLT--DVTALAAGNAHALALRTDR-TVWAWGGNQRGQIGDGTASIMPA 852

Query: 474 PTEI 477
           P  +
Sbjct: 853 PVNV 856



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 131/327 (40%), Gaps = 36/327 (11%)

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VSA+ +H   + + G V+  G N S   G+    D   P+  P L   +       V A 
Sbjct: 148 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLTSVMA------VAAS 201

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--------GSVVQIAA 277
              +  L   G V   G N +GQLG G    R TP  +  L  V        G+ V I+A
Sbjct: 202 EAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISA 261

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
              + LA+  +G V+++G  S   LG G   +   P  +         V  ++AG  H +
Sbjct: 262 ---HSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGL----TSVTALAAGAFHSL 314

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA-------RKRKTFV 390
           AL   G V+ WG    G LG G    +  P  +  L S +AV           R   +  
Sbjct: 315 ALRDDGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLA 374

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L   G+V+ +G+    S  F D G+      P  +  L     + +  G  H VV+   G
Sbjct: 375 LKSDGTVWAWGYN--LSRQFGD-GMPATRTTPVQVSELTGG--TALVAGDLHAVVLKSDG 429

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            ++ +GDN   QLG        +P ++
Sbjct: 430 TVWAWGDNSSGQLGEGVTPVRAKPMQV 456



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 13/198 (6%)

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
           P   V+A  + T  L   G V   G N  GQLG+G   DR TP  +  L    SV+ +AA
Sbjct: 144 PAPAVSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLT---SVMAVAA 200

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS------A 331
             ++ LA+  +G V+++G      LG G +     P  +Q     G+  +         A
Sbjct: 201 SEAHSLALRSDGTVWAWGDNGYGQLGDGTKAQRTTP--VQVLGLAGVTALAAGGNGTTVA 258

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
              H +AL S G V+ WG    G LG G   ++  P  +  L S  A  + A    +  L
Sbjct: 259 ISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTSVTA--LAAGAFHSLAL 316

Query: 392 VDTGSVYGFGWMGFGSLG 409
            D G+V+ +G    G LG
Sbjct: 317 RDDGTVWAWGNNSSGQLG 334


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 144/323 (44%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q+     H A V + G+VFT G+      GH      I RP+LVE L       V  G
Sbjct: 253 VHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGH-GIQVDISRPKLVEFLALTNIDFVACG 311

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  ++  G + + G   H  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 312 EYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL-QVLSVACGTWHS 370

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
              T NG +++FG G+   LGHG +     P+ +Q+    G+  V+V+    H  A+   
Sbjct: 371 ALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSL--NGLKTVKVACSIWHTAAIVEV 428

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   SS  ++TWG G    LGHG++    LP  +SSL  +   ++      T  L 
Sbjct: 429 MGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALT 488

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G    G LG     +SD  L   + D L    V +I+ G +H  V+T R  +
Sbjct: 489 TSGHVFTMGGTAHGQLG---NSISDGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRSEV 545

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           F +G     +LGH        PT
Sbjct: 546 FTWGKGANGRLGHGDTEDKRTPT 568



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YHT ++S S  +FS G  +   G+LGHG + +  +   R++ P     V+ V+  
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIP-KRVSGPLEGLQVLSVACG 366

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG-F 231
             H+A    +G++FT GD +    GH +    +  P+ V++L G+   +V   +  T   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGN-RESVSYPKEVQSLNGLKTVKVACSIWHTAAI 425

Query: 232 LTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
           + + G          + T G     +LGHG+      P  ++ L +  +  +IA G ++ 
Sbjct: 426 VEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDY-NFHKIACGHTFT 484

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+T +G V++ G  ++  LG+     +L P  +Q  R  G  V  ++ GD HV  L S 
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSISDGKL-PCLVQD-RLVGEFVEEIACGDHHVAVLTSR 542

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             V+TWGKG  G LGHGD  DK  P  + +L+
Sbjct: 543 SEVFTWGKGANGRLGHGDTEDKRTPTCVEALR 574



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 13/300 (4%)

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           G+V+T G               +  PR +E+   +   Q+  G+     +T +G V T G
Sbjct: 217 GEVWTEGILPDGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWG 276

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 301
               G+LGHG  +D   PK +  L  + ++  +A G  +   V+ +G ++S+G G +   
Sbjct: 277 EEVGGRLGHGIQVDISRPKLVEFLA-LTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVG 335

Query: 302 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LGHG       P+ + +   +G+ V+ V+ G  H     ++G ++T+G G  G LGHG+
Sbjct: 336 LLGHGSDISHWIPKRV-SGPLEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGN 394

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPD 412
               + P+ + SL     V+V      T  +V+     G        F W G G      
Sbjct: 395 RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTGTSMSSRKLFTW-GDGDKNRLG 453

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            G  +  L P  + SL  ++  +I+ G   TV +T  G +F  G     QLG+    G L
Sbjct: 454 HGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKL 513



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 140/344 (40%), Gaps = 34/344 (9%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
           QI  G  H  L++    VF+ G  + G LGHG       P+  + ++ T I+F       
Sbjct: 255 QIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF------- 307

Query: 168 QVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
            V+  E H   V  SG +F+ GD  ++    GH          R+   L+G+    V  G
Sbjct: 308 -VACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 366

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-----EVGSVVQIAAGPS 280
              +   T  G + T G    G LGHG+      PK +  L      +V   +   A   
Sbjct: 367 TWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIV 426

Query: 281 YMLAVTGNGV----VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            ++  TG  +    ++++G G    LGHG +   L P  + +      H  +++ G    
Sbjct: 427 EVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH--KIACGHTFT 484

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTG 395
           VAL +SG+V+T G    G LG+    D  LP  +   L      ++        VL    
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGNSIS-DGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRS 543

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            V+ +G    G LG  D    DK   P  +++LR  HV  +S G
Sbjct: 544 EVFTWGKGANGRLGHGD--TEDKRT-PTCVEALRDRHVKSLSCG 584



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 24/250 (9%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G +H+ L  +N  +F+ G    GVLGHG    + VS+ + +   +    V+V+ S
Sbjct: 361 LSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKVACS 418

Query: 173 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
             H A +++          S ++FT GD      GH +    +  P  V +L      ++
Sbjct: 419 IWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLL-PTCVSSLIDYNFHKI 477

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSY 281
             G  FT  LT  GHV T G   HGQLG+  + D   P  +     VG  V+ IA G  +
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGNSIS-DGKLP-CLVQDRLVGEFVEEIACGDHH 535

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           +  +T    V+++G G+N  LGHG+  D+  P  ++  R +  HV  +S G        S
Sbjct: 536 VAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDR--HVKSLSCGSN----FTS 589

Query: 342 SGYVYTWGKG 351
           S  ++ W  G
Sbjct: 590 SICIHKWVSG 599


>gi|408500684|ref|YP_006864603.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465508|gb|AFU71037.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1173

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 154/358 (43%), Gaps = 20/358 (5%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
            Q   G  H+  + S+ S+++ G +  G LG           ++   P+    V VSA   
Sbjct: 712  QADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDTADKPDSHPSKAEAPAGVTFVHVSAGYG 771

Query: 175  HAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  +   G +++ GDNS    G   T N P  RP  VEA  G+   Q +AG +    L+
Sbjct: 772  FSVALASDGSLYSWGDNSRGQLGRTVTSNNPANRPHKVEAPAGITFVQASAGGSHVVALS 831

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKS-IAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G+++T G N+ GQLG   T + P  K   A      +   ++AG  + +AV   G VY
Sbjct: 832  SDGNIYTWGDNSAGQLGRTVTSNNPADKPGKADTPADVTFTSVSAGQGHTVAVDTQGDVY 891

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            ++G  ++  LG          +  +     GI   + SAG+ H VA+   G +YTWG   
Sbjct: 892  TWGDNTHGELGRSTTSTPAD-KPGKADTPAGITFTQASAGESHSVAVSDDGSIYTWGDTA 950

Query: 353  CGALGHGDEI---DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG    I   DK  P    +       Q  A  + +  L   GS+Y +G  G  S G
Sbjct: 951  NGRLGRDTNITPADK--PGKADTPAGVTFTQASAGGKHSIALGSDGSLYTWGDSGKTSAG 1008

Query: 410  FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
                       RP  +D+      +Q S G  + + +   G L+ +GDN + QLG DT
Sbjct: 1009 -----------RPNKVDTPAGITFTQASAGASYCLALGSDGNLYSWGDNAKGQLGRDT 1055



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 150/328 (45%), Gaps = 16/328 (4%)

Query: 145  HGPETT-QCVSFTRINFPSAAHVVQVSASEN---HAAFVLQSGQVFTCGDNSSFCCGHRD 200
            +GPE+  Q V+ T    P  A  +++S ++    H+A V   G ++T GDNS    G   
Sbjct: 689  NGPESGGQTVTLT----PPPARGIRISQADGGDLHSAAVGSDGSLYTWGDNSHGQLGRDT 744

Query: 201  TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
             ++P   P   EA  GV    V+AG  F+  L   G +++ G N+ GQLG   T + P  
Sbjct: 745  ADKPDSHPSKAEAPAGVTFVHVSAGYGFSVALASDGSLYSWGDNSRGQLGRTVTSNNPAN 804

Query: 261  KSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
            +        G + VQ +AG S+++A++ +G +Y++G  S   LG     +    +  +  
Sbjct: 805  RPHKVEAPAGITFVQASAGGSHVVALSSDGNIYTWGDNSAGQLGRTVTSNNPADKPGKAD 864

Query: 320  RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSH 376
                +    VSAG  H VA+D+ G VYTWG    G LG        DK  P    +    
Sbjct: 865  TPADVTFTSVSAGQGHTVAVDTQGDVYTWGDNTHGELGRSTTSTPADK--PGKADTPAGI 922

Query: 377  LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
               Q  A +  +  + D GS+Y +G    G LG  D  ++    +P   D+      +Q 
Sbjct: 923  TFTQASAGESHSVAVSDDGSIYTWGDTANGRLGR-DTNIT-PADKPGKADTPAGVTFTQA 980

Query: 437  STGLYHTVVVTDRGRLFGFGDNERAQLG 464
            S G  H++ +   G L+ +GD+ +   G
Sbjct: 981  SAGGKHSIALGSDGSLYTWGDSGKTSAG 1008



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 141/329 (42%), Gaps = 24/329 (7%)

Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-------RDTNRPIFRPRL 210
           +N P+  H  QVS    H   +   G +++ G+N+    G        +D  +   +P+L
Sbjct: 212 VNPPTGVHFTQVSTGYTHFLAIGSDGNLYSWGNNADGELGRETVSTTPKDNPQIDNQPKL 271

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEE 268
           V    GV   Q  AG   +  L   G++++ G N +G+LG   G  +    P  +   + 
Sbjct: 272 VTPPAGVHFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIYDVKPGKVNLPKG 331

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---GEQHDELQPRAIQTFRRKGIH 325
           +  + QI+AG  Y +A+  +G +YS+G  +   LG    G    +  PR + T       
Sbjct: 332 ITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDRSPRKM-TMPAGVKK 390

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG------DEIDKTLPEPLSSLKSHLAV 379
              + AG+   +A  S G +Y+WG    G LG        D   + +  P    K     
Sbjct: 391 FTWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPAGVTK---FT 447

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQIST 438
           +V A  R +  L   G++Y +G      LG  D G +   ++P ++         +++S 
Sbjct: 448 KVSAEHRHSLALGSDGNLYSWGLNDCKQLGR-DTGSAKYDVKPGKVPTPAGVAQFTEVSA 506

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           G  H++ +   G L+ +G N+  +LG  T
Sbjct: 507 GYSHSLAIGSDGNLYSWGQNKYGELGRPT 535



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 148/349 (42%), Gaps = 42/349 (12%)

Query: 147 PETTQCVSFTRINF-PSAAHVVQ----VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT 201
           P + +   +TRI   P     ++    V A E  +  +   G ++  GDN+       D 
Sbjct: 146 PTSGKATEYTRITLTPPTTPDIRFSHIVPAKEEGSQAIASDGNLYRWGDNNYKLGTPEDE 205

Query: 202 NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPT 259
            R    P LV    GV   QV+ G  +T FL I   G++++ G+N  G+LG       P 
Sbjct: 206 KR---TPSLVNPPTGVHFTQVSTG--YTHFLAIGSDGNLYSWGNNADGELGRETVSTTPK 260

Query: 260 --------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQHD 309
                   PK + P   V    Q  AG  + LA+  +G +YS+G      LG   G    
Sbjct: 261 DNPQIDNQPKLVTPPAGV-HFTQACAGKWHSLALGSDGNLYSWGENKYGELGRDTGSAIY 319

Query: 310 ELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKG-------YCGALGHGDE 361
           +++P  +     KGI  + ++SAG  + +ALDS G +Y+WG         Y G     D 
Sbjct: 320 DVKPGKVNL--PKGITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYPFRDR 377

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDK 418
             + +  P    K      + A +  +      GS+Y +GW  +G LG    P R   D+
Sbjct: 378 SPRKMTMPAGVKK---FTWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPAR--QDR 432

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
             R ++         +++S    H++ +   G L+ +G N+  QLG DT
Sbjct: 433 TPR-KVTMPAGVTKFTKVSAEHRHSLALGSDGNLYSWGLNDCKQLGRDT 480



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 20/273 (7%)

Query: 100 VEHSSDIVETSAGNQM-QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQC---VS 154
           +++   +V   AG    Q   G++H+L + S+ +++S G +  G LG   +T      V 
Sbjct: 265 IDNQPKLVTPPAGVHFTQACAGKWHSLALGSDGNLYSWGENKYGELGR--DTGSAIYDVK 322

Query: 155 FTRINFPSA-AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRL 210
             ++N P     + Q+SA   ++  +   G +++ GDN+    G      P FR   PR 
Sbjct: 323 PGKVNLPKGITKITQISAGTFYSMALDSDGDLYSWGDNTYDELGRYAGGYP-FRDRSPRK 381

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRP--TPKSIAPLE 267
           +    GV          +T   T   G +++ G N +GQLG      R   TP+ +    
Sbjct: 382 MTMPAGVKKFTWIKAGEWTSLATSSDGSLYSWGWNEYGQLGRNTAPARQDRTPRKVTMPA 441

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQHDELQPRAIQTFRRKGI- 324
            V    +++A   + LA+  +G +YS+G      LG   G    +++P  + T    G+ 
Sbjct: 442 GVTKFTKVSAEHRHSLALGSDGNLYSWGLNDCKQLGRDTGSAKYDVKPGKVPT--PAGVA 499

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               VSAG  H +A+ S G +Y+WG+   G LG
Sbjct: 500 QFTEVSAGYSHSLAIGSDGNLYSWGQNKYGELG 532



 Score = 41.6 bits (96), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
           V A++  +  +   G++Y +G   +  LG P+    D+   P +++     H +Q+STG 
Sbjct: 173 VPAKEEGSQAIASDGNLYRWGDNNY-KLGTPE----DEKRTPSLVNPPTGVHFTQVSTGY 227

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTL 468
            H + +   G L+ +G+N   +LG +T+
Sbjct: 228 THFLAIGSDGNLYSWGNNADGELGRETV 255


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
           queenslandica]
          Length = 4694

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 121/230 (52%), Gaps = 9/230 (3%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT  G V++ G  ++G LG G+T  +  P ++A L     +V I+AG  +  AVT +GV+
Sbjct: 523 LTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSG-DRIVHISAGSMHSAAVTEDGVL 581

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVALDSSGYVYTWG 349
           Y++G GS   LGHG   D+L P  ++     G+ +V+V   +GD H +ALD +G V++WG
Sbjct: 582 YTWGKGSYGRLGHGNAEDKLIPTIVEGL--NGVKIVQVDCGSGDAHTLALDDTGQVWSWG 639

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G  G LG        +P+P+S + S    V++    + +  L   G +Y +G      L
Sbjct: 640 DGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQL 699

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           G    G  + V +P++++ L    VS +S G  H V +T    ++ +G N
Sbjct: 700 G---HGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWGKN 746



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 158/358 (44%), Gaps = 9/358 (2%)

Query: 128  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
            S  SVF  G +  G LG G E  +  S       S  +   ++  E     V   G+V+ 
Sbjct: 3832 STFSVFGWGHNHRGQLG-GIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYA 3890

Query: 188  CG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRGHVHTCGS 243
             G   +     G  D N     P    A +G+  K++   +G      +T +G ++  G 
Sbjct: 3891 SGYAAHGRLGIGSSD-NVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGE 3949

Query: 244  NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
               G+LG G T++   P  I  L+    V+    G S+   +T +G +Y++G G    LG
Sbjct: 3950 GEDGKLGLGTTVNMNVPHLIESLKS-KHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLG 4008

Query: 304  HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
            H +   + +P+ +   + + +  V   +GD   +   +SG V++WG G  G LG G    
Sbjct: 4009 HNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEG 4068

Query: 364  KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
              +P+ + SL     +++    + +  L   G VY +G   +  LG  D   S +    R
Sbjct: 4069 SKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDD--SHQRTPRR 4126

Query: 424  ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            +L  L   +V  I  G  H +V T+ G++F +GDN+  Q+G+DT +    P  I I +
Sbjct: 4127 VLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPKRINITD 4184



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 106/211 (50%), Gaps = 10/211 (4%)

Query: 272 VVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
           ++QI   PS  ++LA+T +G VYS+G GSN  LG G    +  P A+      G  +V +
Sbjct: 508 IIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAAL--SGDRIVHI 565

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CAR-KRK 387
           SAG  H  A+   G +YTWGKG  G LGHG+  DK +P  +  L     VQV C      
Sbjct: 566 SAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAH 625

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL-RAHHVSQISTGLYHTVVV 446
           T  L DTG V+ +G   +G LG P    SD+   P+ +  +     V +I  G   ++ +
Sbjct: 626 TLALDDTGQVWSWGDGDYGKLGRPG---SDQNKVPKPISGIGSTSPVVKIICGNQISMAL 682

Query: 447 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           T  G+L+ +G  +  QLGH       +P  I
Sbjct: 683 TKDGKLYSWGCGDTYQLGHGNQEHVRQPKLI 713



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 155/342 (45%), Gaps = 28/342 (8%)

Query: 115  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--------AAH 165
            +Q   G   + ++S+   VF+CG    G LG G        F  I  P            
Sbjct: 2961 IQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIG-------GFANIRMPHQISSLSMYVVR 3013

Query: 166  VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
             V VS +  H   V   G+VF+ GD      GH  + +   RP+++E  +    ++V+ G
Sbjct: 3014 KVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGH-GSLQSYDRPKMIEIFQAKHIREVSCG 3072

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA 284
               +  +++ G + T G    G+LGHGD+ ++  PK +  LE+V  S V   +  ++ LA
Sbjct: 3073 TGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLA 3132

Query: 285  VTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
              G+  ++++G GS     L  G    ++ P  + TF     +++++  G    V L   
Sbjct: 3133 A-GDNSLWAWGDGSFGKLGLKDGSSSTDV-PVQVITFPS---NIIQIECGMHFSVLLTKE 3187

Query: 343  GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            G VYTWGKG    LG+     + +P  +  L S    QV         L  +G VY +G 
Sbjct: 3188 GKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGD 3247

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               G  G  +  + ++  +P+I+ SL+ H + +I+ G  H++
Sbjct: 3248 NEHGQQG-NNSTICNR--KPQIVASLKGHRICKIACGSSHSI 3286



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 110/234 (47%), Gaps = 6/234 (2%)

Query: 119 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           +G +   L  +  V+S G    GVLG G   +Q    T +   S   +V +SA   H+A 
Sbjct: 516 SGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTAP-TAVAALSGDRIVHISAGSMHSAA 574

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTIRG 236
           V + G ++T G  S    GH +    +  P +VE L GV   QV   +G   T  L   G
Sbjct: 575 VTEDGVLYTWGKGSYGRLGHGNAEDKLI-PTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V + G   +G+LG   +     PK I+ +     VV+I  G    +A+T +G +YS+G 
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGC 693

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           G  + LGHG Q    QP+ I+        V  VS G +H VAL +   VY WGK
Sbjct: 694 GDTYQLGHGNQEHVRQPKLIEGLSE--TVVSDVSVGAQHCVALTTDSDVYAWGK 745



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 147/307 (47%), Gaps = 12/307 (3%)

Query: 165  HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT- 223
            H +Q +     +  V   G+VF CG+ SS   G       I  P  + +L     ++V  
Sbjct: 2959 HPIQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFAN-IRMPHQISSLSMYVVRKVAV 3017

Query: 224  --AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
              AG +    +T  G V + G   +GQLGHG       PK I  + +   + +++ G  +
Sbjct: 3018 SCAGRHVLA-VTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIE-IFQAKHIREVSCGTGH 3075

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
              AV+ NG ++++G G++  LGHG+ +++ +P+ ++   +  I  V   + + H +A   
Sbjct: 3076 SAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGD 3135

Query: 342  SGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
            +  ++ WG G  G LG  D    T +P  + +  S++ +Q+      + +L   G VY +
Sbjct: 3136 NS-LWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSNI-IQIECGMHFSVLLTKEGKVYTW 3193

Query: 401  GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
            G   +  LG     V      P ++D L +  ++Q++ G  H + +T  G ++ +GDNE 
Sbjct: 3194 GKGEYYRLGNDSTSVQPI---PTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEH 3250

Query: 461  AQLGHDT 467
             Q G+++
Sbjct: 3251 GQQGNNS 3257



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 5/245 (2%)

Query: 160 FPSAAHVVQV--SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
           FP    ++Q+  + S NH   + + G+V++ G  S+   G  +T      P  V AL G 
Sbjct: 502 FPGDEEIIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQT-APTAVAALSGD 560

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIA 276
               ++AG   +  +T  G ++T G  ++G+LGHG+  D+  P  +  L  V  V V   
Sbjct: 561 RIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCG 620

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           +G ++ LA+   G V+S+G G    LG         P+ I         VV++  G++  
Sbjct: 621 SGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTS-PVVKIICGNQIS 679

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
           +AL   G +Y+WG G    LGHG++     P+ +  L   +   V    +    L     
Sbjct: 680 MALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSD 739

Query: 397 VYGFG 401
           VY +G
Sbjct: 740 VYAWG 744



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 7/145 (4%)

Query: 324  IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-- 381
            +H ++ + G +    +   G V+  G+G  G LG G   +  +P  +SSL  ++  +V  
Sbjct: 2958 LHPIQFAGGSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAV 3017

Query: 382  -CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
             CA +    V  D G V+ +G   +G LG    G      RP++++  +A H+ ++S G 
Sbjct: 3018 SCAGRHVLAVTAD-GKVFSWGDGQYGQLG---HGSLQSYDRPKMIEIFQAKHIREVSCGT 3073

Query: 441  YHTVVVTDRGRLFGFGDNERAQLGH 465
             H+  V+  G LF +G     +LGH
Sbjct: 3074 GHSAAVSVNGELFTWGQGADGRLGH 3098



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 11/192 (5%)

Query: 115 MQITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS--A 171
           + I+ G  H+  ++   V ++ G    G LGHG    + +  T +   +   +VQV   +
Sbjct: 563 VHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIP-TIVEGLNGVKIVQVDCGS 621

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVEALKGV-PCKQVTAGLNF 228
            + H   +  +GQV++ GD      G    D N+    P+ +  +    P  ++  G   
Sbjct: 622 GDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNK---VPKPISGIGSTSPVVKIICGNQI 678

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G +++ G     QLGHG+      PK I  L E   V  ++ G  + +A+T +
Sbjct: 679 SMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSET-VVSDVSVGAQHCVALTTD 737

Query: 289 GVVYSFGSGSNF 300
             VY++G  S+F
Sbjct: 738 SDVYAWGKNSSF 749



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 8/139 (5%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
            V+ WG      LG  D  +  +  P+ S  L     +Q     + +FV+ D G V+  G 
Sbjct: 2926 VFVWGLNDMRQLG-TDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGE 2984

Query: 403  MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNER 460
               G LG    G    +  P  + SL  + V +++      H + VT  G++F +GD + 
Sbjct: 2985 GSSGRLGI---GGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQY 3041

Query: 461  AQLGHDTLRGCLEPTEIFI 479
             QLGH +L+    P  I I
Sbjct: 3042 GQLGHGSLQSYDRPKMIEI 3060


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 130/280 (46%), Gaps = 31/280 (11%)

Query: 221  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD--RPTP----KSIAPLE--EVGSV 272
            Q+  G   T  +T   H++T G    G+LGHG   D   P P     S+   E  E G V
Sbjct: 1248 QIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFGGV 1307

Query: 273  VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            V ++ G  + + VTGNG +Y FG G    LG GE    L P  +        ++  V+ G
Sbjct: 1308 VDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDLR-----NIAAVACG 1362

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
             EH +AL S G V+ +G G+ G LG+G E D+ LP  +  L+ +  V + A +  +  L 
Sbjct: 1363 REHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALS 1422

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH-----------VSQISTGLY 441
              G V  +   GFGS G    G  D  L P ++D    +            V+ ++ G Y
Sbjct: 1423 RDGEVLTW---GFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSY 1479

Query: 442  HTVVVTDRGRLFGFGDNERAQLGHDTLRG----CLEPTEI 477
            HT+  T+ G L+G+GD    QLG + L       L P EI
Sbjct: 1480 HTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEI 1519



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 30/331 (9%)

Query: 149  TTQCVSFTR-INFPSA-AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNR 203
            +T+ +S  R ++FP     VVQ++    H A +     ++T G       GH    D   
Sbjct: 1227 STENLSAVRMVSFPPPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTD 1286

Query: 204  PI---FRPRLVEALKGVP---CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 257
            PI   +   L+ A +GV       V+ G   T  +T  G ++  G    G+LG G+T   
Sbjct: 1287 PIPVGYFTSLIAA-EGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSS 1345

Query: 258  PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
              P  +    ++ ++  +A G  + LA+T  G V++FG+G    LG+G + DE  P  ++
Sbjct: 1346 LYPSRV----DLRNIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVE 1401

Query: 318  TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 377
                  I  V ++AG+ H  AL   G V TWG G  GALGHG   +  +P  +    ++ 
Sbjct: 1402 GLEEYSI--VAIAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNP 1459

Query: 378  AVQ-----------VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-KVLRPRIL 425
             V+           V      T    + G +YG+G    G LG       D  VL P+ +
Sbjct: 1460 NVETLIHDISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEI 1519

Query: 426  DSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
                +  +  I+ G + + V + +G+LF +G
Sbjct: 1520 RLPTSSGIRGIACGTFTSAVCSTQGQLFMWG 1550



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 153/361 (42%), Gaps = 39/361 (10%)

Query: 115  MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET-----------TQCVSFTRINFPS 162
            +QI  G  HT LI++   +++ G   CG LGHG E            T  ++   + F  
Sbjct: 1247 VQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEF-- 1304

Query: 163  AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL-VEALKGVPCKQ 221
               VV VS    H   V  +G ++  G   +   G  +T   ++  R+ +  +  V C  
Sbjct: 1305 -GGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDLRNIAAVAC-- 1361

Query: 222  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
               G   T  LT +G V   G+   G+LG+G   D   P  +  LEE  S+V IAAG  +
Sbjct: 1362 ---GREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEY-SIVAIAAGECH 1417

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA---------IQTFRRKGIHVVRVSAG 332
              A++ +G V ++G GS+  LGHG + + L P           ++T       V  V+ G
Sbjct: 1418 SCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACG 1477

Query: 333  DEHVVALDSSGYVYTWGKGYCGALG--HGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTF 389
              H +A  + G +Y WG    G LG  H    D  +  P    L +   ++  A    T 
Sbjct: 1478 SYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGIACGTFTS 1537

Query: 390  VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
             +  T G ++ +G    G+ G P       V R  +L        SQI+ G YH V +T 
Sbjct: 1538 AVCSTQGQLFMWGSPAAGN-GAPLDVEDAHVKRVGVLGEF---EFSQIACGAYHAVAITR 1593

Query: 449  R 449
            +
Sbjct: 1594 K 1594



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 15/150 (10%)

Query: 325  HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA------ 378
             VV+++ G  H   +    ++YT+G G CG LGHG E D T P P+    S +A      
Sbjct: 1245 RVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEF 1304

Query: 379  ---VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               V V   +  T V+   G +YGFGW   G LG  + G S   L P  +D LR  +++ 
Sbjct: 1305 GGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSS---LYPSRVD-LR--NIAA 1358

Query: 436  ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            ++ G  HT+ +T +GR+F FG     +LG+
Sbjct: 1359 VACGREHTLALTSKGRVFAFGAGFGGRLGN 1388



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 100/212 (47%), Gaps = 15/212 (7%)

Query: 272  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIH-- 325
            VVQIA G  +   +T +  +Y+FG G    LGHG + D   P  +  F      +G+   
Sbjct: 1246 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFG 1305

Query: 326  -VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
             VV VS G EH + +  +G +Y +G G  G LG G+      P  +     ++A   C R
Sbjct: 1306 GVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVD--LRNIAAVACGR 1363

Query: 385  KRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
            +  T  L   G V+ FG  GF G LG  +   +D+ L P +++ L  + +  I+ G  H+
Sbjct: 1364 EH-TLALTSKGRVFAFG-AGFGGRLG--NGSETDEEL-PFLVEGLEEYSIVAIAAGECHS 1418

Query: 444  VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
              ++  G +  +G      LGH T   CL PT
Sbjct: 1419 CALSRDGEVLTWGFGSSGALGHGTRDNCLIPT 1450



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 27/268 (10%)

Query: 112  GNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 170
            G  + ++ GR HT++++ N  ++  G    G LG G ET   +  +R++     ++  V+
Sbjct: 1305 GGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTG-ETGSSLYPSRVDL---RNIAAVA 1360

Query: 171  ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
                H   +   G+VF  G       G+  +T+  +  P LVE L+      + AG   +
Sbjct: 1361 CGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEEL--PFLVEGLEEYSIVAIAAGECHS 1418

Query: 230  GFLTIRGHVHTCGSNTHGQLGHG--DTLDRPT--------PKSIAPLEEVGSVVQIAAGP 279
              L+  G V T G  + G LGHG  D    PT        P     + ++  V  +A G 
Sbjct: 1419 CALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGS 1478

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLG--HGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEH 335
             + LA T +GV+Y +G  +   LG  H    D   L P+ I+     GI    ++ G   
Sbjct: 1479 YHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIR--GIACGTFT 1536

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEID 363
                 + G ++ WG     A G+G  +D
Sbjct: 1537 SAVCSTQGQLFMWGS---PAAGNGAPLD 1561



 Score = 38.5 bits (88), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 431  HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
              V QI+ G  HT ++TD   L+ FG  E  +LGH T   C +P  +
Sbjct: 1244 RRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPV 1290


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 152/313 (48%), Gaps = 23/313 (7%)

Query: 155 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
           FT++ +P    ++ V+A   H A + QSG++FT G+      GH D    I  P+ V AL
Sbjct: 122 FTKL-YPEE-RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGD-EESISTPKQVVAL 178

Query: 215 KGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVG 270
             +P K V  G   T  L  T    ++T G+N  GQLG GD  D  T  P+S+A +    
Sbjct: 179 ANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVA-VPGAK 237

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
            +V + AG S    +  +G ++++G G +  LGHG+  +  QP  + +    G  VV V+
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLY--GHVVVAVA 295

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLS-SLKSHLAVQVCARKRKT 388
            G  H +AL  +G +++WG+G  G LGHG    + L P+ L   +     + + A    +
Sbjct: 296 LGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHS 355

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDR-----GVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
              +D GSVY +G   +G LG  D       +  ++L PR +          IS G  HT
Sbjct: 356 VAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGI------RFKTISCGFQHT 409

Query: 444 VVVTDRGRLFGFG 456
           V +T    ++ +G
Sbjct: 410 VALTSDNTIYSWG 422



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 7/242 (2%)

Query: 130 SSVFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
           S +++ G++  G LG G   +   C+    +  P A  +V + A  + AA +  SG +FT
Sbjct: 202 SGLYTWGNNEFGQLGRGDCGDDFTCLP-ESVAVPGAKRLVALDAGASRAAVIDSSGALFT 260

Query: 188 CGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
            G       GH DT NR  ++P LV +L G     V  G   +  LT  G + + G   +
Sbjct: 261 WGRGDHGRLGHGDTENR--YQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGEN 318

Query: 247 GQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           GQLGHG    +   PK +    ++  ++ I+AG  + +A   +G VY++G      LG G
Sbjct: 319 GQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTG 378

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           +  D       +    +GI    +S G +H VAL S   +Y+WG G  G LG  +E ++ 
Sbjct: 379 DSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQC 438

Query: 366 LP 367
            P
Sbjct: 439 AP 440



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 22/254 (8%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           V AG      ++  G + T G   +G+LGHGD     TPK +  L  +        G S 
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 282 M-LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVA 338
           + L+ T    +Y++G+     LG G+  D+    P ++     K   +V + AG      
Sbjct: 194 IALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAK--RLVALDAGASRAAV 251

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +DSSG ++TWG+G  G LGHGD  ++  P  +SSL  H+ V V      +  L   G ++
Sbjct: 252 IDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELF 311

Query: 399 GFGWMGFGSLG---FPDRGVSDKVLR-----PRILDSLRAHHVSQISTGLYHTVVVTDRG 450
            +G    G LG   +  + ++ K L+     P+I+          IS G YH+V   D G
Sbjct: 312 SWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIG---------ISAGGYHSVAQLDDG 362

Query: 451 RLFGFGDNERAQLG 464
            ++ +G ++   LG
Sbjct: 363 SVYAWGMSDYGILG 376



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 115/262 (43%), Gaps = 16/262 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETT-----QCVSFTRINFPSAAHVVQVS 170
           +  G  H  +IS S  +F+ G    G LGHG E +     Q V+   I         + +
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 229
            + +H A       ++T G+N     G  D        P  V          + AG +  
Sbjct: 194 IALSHTA----GSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRA 249

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGN 288
             +   G + T G   HG+LGHGDT +R  P  ++ L   G VV  +A G  + LA+T  
Sbjct: 250 AVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSL--YGHVVVAVALGGGHSLALTKA 307

Query: 289 GVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           G ++S+G G N  LGHG  Q  +L P+ +Q F      ++ +SAG  H VA    G VY 
Sbjct: 308 GELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMP-KIIGISAGGYHSVAQLDDGSVYA 366

Query: 348 WGKGYCGALGHGDEIDKTLPEP 369
           WG    G LG GD  D  +  P
Sbjct: 367 WGMSDYGILGTGDSDDGAINIP 388



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 12/259 (4%)

Query: 238 VHTCGSNT-HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
           +   G+N+ H +   G   +    K    L     ++ + AG +++  ++ +G ++++G 
Sbjct: 96  LKNSGNNSLHNKDDSGSNNNNDDDKYFTKLYPEERIILVNAGAAHIAMISQSGKLFTWGE 155

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG--YVYTWGKGYCG 354
           G    LGHG++     P+  Q      I +  V  G    +AL  +    +YTWG    G
Sbjct: 156 GQYGRLGHGDEESISTPK--QVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFG 213

Query: 355 ALGHGDEIDK--TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            LG GD  D    LPE ++   +   V + A   +  V+  +G+++ +G    G LG   
Sbjct: 214 QLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLG--- 270

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-C 471
            G ++   +P ++ SL  H V  ++ G  H++ +T  G LF +G  E  QLGH + +   
Sbjct: 271 HGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQ 330

Query: 472 LEPTEI-FIQEMEEDTGLA 489
           L P ++ F  +M +  G++
Sbjct: 331 LAPKQLQFFVDMPKIIGIS 349


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 114/225 (50%), Gaps = 9/225 (4%)

Query: 242 GSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           G    GQLG  D     + P P+ +    E+   V++A G S+ LA+TG+G VYSFG G+
Sbjct: 5   GCGEFGQLGLKDAAGVFNSPLPRFLRGSREL-LFVRVACGSSHTLALTGSGDVYSFGQGT 63

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LGHG       P  + +    G+ +V+++ GD H  AL   G +++WG+G  G LG 
Sbjct: 64  FGALGHGTTESCSSPVIVDSLW--GLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC 121

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           G   +   P P+++L   L  QV      T  +   G +  F W G G  G    G  D 
Sbjct: 122 GSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQL--FSW-GHGHWGQTGHGTQDN 178

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
           +L P+++ SL   ++ Q S G  H V +T  G ++ +GDNE+ Q+
Sbjct: 179 ILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 4/184 (2%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V+V+   +H   +  SG V++ G  +    GH  T      P +V++L G+   Q+  G 
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGH-GTTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           N +  LT+ G + + G   +GQLG G   +   P  +  L +   + Q+  G  Y +A+ 
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDR-LLTQVVCGADYTMAID 155

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++S+G G     GHG Q + L P+ + +      ++V+ SAG  H VAL S G VY
Sbjct: 156 SDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEND--NIVQASAGARHAVALTSGGGVY 213

Query: 347 TWGK 350
            WG 
Sbjct: 214 AWGD 217



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G  HTL ++ S  V+S G    G LGHG  T  C S   ++      +VQ++  +
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGHG-TTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 174 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           NH+  +   GQ+F+ G        CG  + +    +P  V AL      QV  G ++T  
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENH---LQPVPVTALSDRLLTQVVCGADYTMA 153

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +   G + + G    GQ GHG   +   PK +  LE   ++VQ +AG  + +A+T  G V
Sbjct: 154 IDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEN-DNIVQASAGARHAVALTSGGGV 212

Query: 292 YSFG 295
           Y++G
Sbjct: 213 YAWG 216



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 7/174 (4%)

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           PR ++  R   +  VRV+ G  H +AL  SG VY++G+G  GALGHG     + P  + S
Sbjct: 26  PRFLRGSRE--LLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDS 83

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L     VQ+      +  L   G ++ +G   +G LG    G  +  L+P  + +L    
Sbjct: 84  LWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC---GSVENHLQPVPVTALSDRL 140

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 486
           ++Q+  G  +T+ +   G+LF +G     Q GH T    L P    +  +E D 
Sbjct: 141 LTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPK--LVCSLENDN 192



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 6/136 (4%)

Query: 345 VYTWGKGYCGALGHGDE---IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           + +WG G  G LG  D     +  LP  L   +  L V+V      T  L  +G VY FG
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
              FG+LG    G ++    P I+DSL    + QI+ G  H+  +T  G+LF +G  +  
Sbjct: 61  QGTFGALG---HGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYG 117

Query: 462 QLGHDTLRGCLEPTEI 477
           QLG  ++   L+P  +
Sbjct: 118 QLGCGSVENHLQPVPV 133


>gi|145495055|ref|XP_001433521.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400639|emb|CAK66124.1| unnamed protein product [Paramecium tetraurelia]
          Length = 447

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 153/336 (45%), Gaps = 29/336 (8%)

Query: 146 GPETTQCVSFTR--------INFPSAAH---VVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G E+T C++  +        I  P       + Q++AS+ H  F     QVF CG N   
Sbjct: 44  GAESTFCITIHKKVFMWGQGIQIPKQLELQDIEQIAASKEHW-FAWSDTQVFGCGSNKQG 102

Query: 195 CCGHRDT-NRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTI---RGHVHTCGSNTHGQL 249
             G  ++ N P       EA + G   +++  GL+ +  L        +   GSN + QL
Sbjct: 103 KLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWGSNAYQQL 162

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G   +            + +  +V I A  +Y +A+   G ++S+GS     LG      
Sbjct: 163 GFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTMAIDEEGRLFSWGSNEFGRLGQNAFAK 222

Query: 310 ELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
            ++ P  I +     + + +++ G  HV+A+D+ G +Y+WG+G  G LGHG   D + P 
Sbjct: 223 CMKLPSPITSL--GNLKIAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSKPN 280

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            +SSL S     V   +  +  L + GSVY FG   FG LG  D    D    P++L   
Sbjct: 281 QISSLSS--IRDVACGEAHSMALQNNGSVYVFGSGQFGQLGLGDYKQQDA---PQMLQI- 334

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              H   I+ G +H+ V+T  G LF FG+NE +QLG
Sbjct: 335 ---HGEMIACGRHHSAVLTKNGALFMFGNNESSQLG 367



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 133/295 (45%), Gaps = 21/295 (7%)

Query: 116 QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASE 173
           QI   + H    S++ VF CGS+  G LG          F   +  S     + +++   
Sbjct: 77  QIAASKEHWFAWSDTQVFGCGSNKQGKLGMNNSVNTPTLFDIFSEASQYGWQLQKIAVGL 136

Query: 174 NHAAFVL---QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           +H+  ++   +  ++F  G N+    G   + + +  P  +++        + A  N+T 
Sbjct: 137 DHSVALIEVEEENKIFVWGSNAYQQLGFDASEQFVAIPHQLDSDNLPRIVDIYAQHNYTM 196

Query: 231 FLTIRGHVHTCGSNTHGQLGH---GDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVT 286
            +   G + + GSN  G+LG       +  P+P  S+  L+    + ++A G  ++LA+ 
Sbjct: 197 AIDEEGRLFSWGSNEFGRLGQNAFAKCMKLPSPITSLGNLK----IAKLALGTFHVLAID 252

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             G +YS+G G    LGHG  +D  +P  I +       +  V+ G+ H +AL ++G VY
Sbjct: 253 TQGNLYSWGRGLQGQLGHGTSNDCSKPNQISSLSS----IRDVACGEAHSMALQNNGSVY 308

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
            +G G  G LG GD   +  P+    L+ H  +  C R     VL   G+++ FG
Sbjct: 309 VFGSGQFGQLGLGDYKQQDAPQ---MLQIHGEMIACGRHHSA-VLTKNGALFMFG 359



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 16/225 (7%)

Query: 260 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           PK +    E+  + QIAA   +  A +   V   FG GSN     G  +    P     F
Sbjct: 67  PKQL----ELQDIEQIAASKEHWFAWSDTQV---FGCGSNKQGKLGMNNSVNTPTLFDIF 119

Query: 320 R---RKGIHVVRVSAGDEHVVAL---DSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSS 372
               + G  + +++ G +H VAL   +    ++ WG      LG    E    +P  L S
Sbjct: 120 SEASQYGWQLQKIAVGLDHSVALIEVEEENKIFVWGSNAYQQLGFDASEQFVAIPHQLDS 179

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
                 V + A+   T  + + G ++ +G   FG LG      +  +  P  + SL    
Sbjct: 180 DNLPRIVDIYAQHNYTMAIDEEGRLFSWGSNEFGRLG--QNAFAKCMKLPSPITSLGNLK 237

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +++++ G +H + +  +G L+ +G   + QLGH T   C +P +I
Sbjct: 238 IAKLALGTFHVLAIDTQGNLYSWGRGLQGQLGHGTSNDCSKPNQI 282


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 161/364 (44%), Gaps = 16/364 (4%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G+YH+L +  + +V++ G +L G LG G          +   P    VV VSA  
Sbjct: 251 VAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSRWLPK-QVPGLGGVVAVSAGF 309

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  V   G V+  G+N+    G   +      P  V  + G     V AG   +  + 
Sbjct: 310 YHSLVVRSDGTVWAWGNNAYGQLGG-GSRAHAASPVQVLGVSG--AVAVAAGYRHSLVVN 366

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G +   GSN  GQ G G     PTP  +  L     VV +AAG  ++LA+  +G V++
Sbjct: 367 SDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPGLS---GVVSVAAGGGHVLALLSDGTVWA 423

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G  ++  LG G +H    PR +         VV V+AG    +A+   G V++WG    
Sbjct: 424 WGDNASGQLGDGTRHSRWVPRQVPELS----GVVAVAAGSSFSLAVRYDGSVWSWGDNAY 479

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LGHG     ++P  +  L     V V A       +   G+V+G+G+  +G LG    
Sbjct: 480 GQLGHGSTDASSVPLHVRELSE--VVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFE 537

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G+S +   P  +  L    +  ++    H++ V   G ++ +G+N  ++LG  T    L 
Sbjct: 538 GISARRYSPVQVPGLSG--MVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLV 595

Query: 474 PTEI 477
           P  +
Sbjct: 596 PLRV 599



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 161/354 (45%), Gaps = 25/354 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L + S+ SV++ G++  G LG  PE    V + R+   S   VV V+A +
Sbjct: 201 VSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAAYPVPW-RVEDVSG--VVAVAAGQ 257

Query: 174 NHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H+  V   G V+  GDN       G  + N   + P+ V  L GV    V+AG   +  
Sbjct: 258 YHSLAVRYDGTVWAWGDNLYGQLGDGKLEGNSR-WLPKQVPGLGGVVA--VSAGFYHSLV 314

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +   G V   G+N +GQLG G      +P  +     V   V +AAG  + L V  +G +
Sbjct: 315 VRSDGTVWAWGNNAYGQLGGGSRAHAASPVQVL---GVSGAVAVAAGYRHSLVVNSDGTL 371

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGK 350
           +++GS  +     G++ D    R     R  G+  VV V+AG  HV+AL S G V+ WG 
Sbjct: 372 WAWGSNLD-----GQRGDGTLTRYPTPGRVPGLSGVVSVAAGGGHVLALLSDGTVWAWGD 426

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG G    + +P  +  L     V V A    +  +   GSV+ +G   +G LG 
Sbjct: 427 NASGQLGDGTRHSRWVPRQVPELSG--VVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGH 484

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                S   L  R L  + A     ++ G  H + V   G ++G+G N+  QLG
Sbjct: 485 GSTDASSVPLHVRELSEVVA-----VAAGSMHALAVRADGTVWGWGFNDYGQLG 533



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 164/374 (43%), Gaps = 27/374 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L + S+ SV++ G +  G LG G    + V    +     + VV V+A  
Sbjct: 151 VSVVAGDTHSLAVRSDGSVWAWGRNTSGQLGDGTRDDRAVP---VQVTGLSGVVSVAAGG 207

Query: 174 NHAAFVLQSGQVFTCGDNSSF-CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           NH+  V   G V+  G+N+S    G  +   P+  P  VE + GV    V AG   +  +
Sbjct: 208 NHSLAVRSDGSVWAWGNNASGQLGGAPEAAYPV--PWRVEDVSGVVA--VAAGQYHSLAV 263

Query: 233 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
              G V   G N +GQLG G  +   R  PK +  L   G VV ++AG  + L V  +G 
Sbjct: 264 RYDGTVWAWGDNLYGQLGDGKLEGNSRWLPKQVPGL---GGVVAVSAGFYHSLVVRSDGT 320

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+++G+ +   LG G +     P  +Q     G   V V+AG  H + ++S G ++ WG 
Sbjct: 321 VWAWGNNAYGQLGGGSRAHAASP--VQVLGVSG--AVAVAAGYRHSLVVNSDGTLWAWGS 376

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G  G G       P  +  L     V V A       L+  G+V+ +G    G LG 
Sbjct: 377 NLDGQRGDGTLTRYPTPGRVPGLSG--VVSVAAGGGHVLALLSDGTVWAWGDNASGQLG- 433

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
              G       PR +  L    V  ++ G   ++ V   G ++ +GDN   QLGH +   
Sbjct: 434 --DGTRHSRWVPRQVPELSG--VVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDA 489

Query: 471 CLEPTEIFIQEMEE 484
              P  + ++E+ E
Sbjct: 490 SSVP--LHVRELSE 501



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 114/241 (47%), Gaps = 16/241 (6%)

Query: 232 LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
           L +R  G V T G N HGQLG G TL R TP  +  L  V +V   AAG  + LA+  +G
Sbjct: 61  LAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSGVAAV---AAGHGHSLALRYDG 117

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++G+ +   LG   + +   P  +Q     G  VV V AGD H +A+ S G V+ WG
Sbjct: 118 TVWAWGNNAYGQLGDDTRDNRTVP--VQVTGLSG--VVSVVAGDTHSLAVRSDGSVWAWG 173

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           +   G LG G   D+ +P  ++ L     V V A    +  +   GSV+ +G    G LG
Sbjct: 174 RNTSGQLGDGTRDDRAVPVQVTGLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLG 231

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
                      R   +  + A     ++ G YH++ V   G ++ +GDN   QLG   L 
Sbjct: 232 GAPEAAYPVPWRVEDVSGVVA-----VAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLE 286

Query: 470 G 470
           G
Sbjct: 287 G 287



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 136/304 (44%), Gaps = 15/304 (4%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  V   G V+T G N     G   T      P  V+ L GV    V AG   +  L  
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGD-GTTLSRRTPVQVQGLSGVAA--VAAGHGHSLALRY 115

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G+N +GQLG     +R  P  +  L     VV + AG ++ LAV  +G V+++
Sbjct: 116 DGTVWAWGNNAYGQLGDDTRDNRTVPVQVTGLS---GVVSVVAGDTHSLAVRSDGSVWAW 172

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G  ++  LG G + D   P  +Q     G  VV V+AG  H +A+ S G V+ WG    G
Sbjct: 173 GRNTSGQLGDGTRDDRAVP--VQVTGLSG--VVSVAAGGNHSLAVRSDGSVWAWGNNASG 228

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG   E    +P  +  +     V V A +  +  +   G+V+ +G   +G LG     
Sbjct: 229 QLGGAPEAAYPVPWRVEDVSG--VVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGKLE 286

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            + + L P+ +  L    V  +S G YH++VV   G ++ +G+N   QLG  +      P
Sbjct: 287 GNSRWL-PKQVPGLGG--VVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASP 343

Query: 475 TEIF 478
            ++ 
Sbjct: 344 VQVL 347



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 157/366 (42%), Gaps = 27/366 (7%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H+L +  + +V++ G++  G LG      + V    +     + VV V A + H
Sbjct: 103 VAAGHGHSLALRYDGTVWAWGNNAYGQLGDDTRDNRTVP---VQVTGLSGVVSVVAGDTH 159

Query: 176 AAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +  V   G V+  G N+S     G RD +R +  P  V  L GV    V AG N +  + 
Sbjct: 160 SLAVRSDGSVWAWGRNTSGQLGDGTRD-DRAV--PVQVTGLSGV--VSVAAGGNHSLAVR 214

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G+N  GQLG       P P  +   E+V  VV +AAG  + LAV  +G V++
Sbjct: 215 SDGSVWAWGNNASGQLGGAPEAAYPVPWRV---EDVSGVVAVAAGQYHSLAVRYDGTVWA 271

Query: 294 FGSGSNFCLGHG--EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +G      LG G  E +    P+ +         VV VSAG  H + + S G V+ WG  
Sbjct: 272 WGDNLYGQLGDGKLEGNSRWLPKQVPGLG----GVVAVSAGFYHSLVVRSDGTVWAWGNN 327

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G         P+  L    AV V A  R + V+   G+++ +G    G  G  
Sbjct: 328 AYGQLGGGSRAHAA--SPVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRG-- 383

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
             G   +   P  +  L    V  ++ G  H + +   G ++ +GDN   QLG  T    
Sbjct: 384 -DGTLTRYPTPGRVPGLSG--VVSVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRHSR 440

Query: 472 LEPTEI 477
             P ++
Sbjct: 441 WVPRQV 446



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 165/399 (41%), Gaps = 64/399 (16%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L++ S+ ++++ GS+L G  G G  T      T    P  + VV V+A  
Sbjct: 353 VAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYP---TPGRVPGLSGVVSVAAGG 409

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   +L  G V+  GDN+S   G   T    + PR V  L GV    V AG +F+  + 
Sbjct: 410 GHVLALLSDGTVWAWGDNASGQLGD-GTRHSRWVPRQVPELSGVVA--VAAGSSFSLAVR 466

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V + G N +GQLGHG T     P  +  L EV   V +AAG  + LAV  +G V+ 
Sbjct: 467 YDGSVWSWGDNAYGQLGHGSTDASSVPLHVRELSEV---VAVAAGSMHALAVRADGTVWG 523

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +G      LG G   + +  R     +  G+  +V V+A   H +A+ + G V+ WG   
Sbjct: 524 WGFNDYGQLGDG--FEGISARRYSPVQVPGLSGMVSVAADFGHSLAVRADGTVWAWGNNT 581

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
              LG G    + +P  +++  +     + A    +  +   GS++ +G    G LG  D
Sbjct: 582 DSELGDGTTTRRLVPLRVNAPGT--VALLSAGYNYSMAMRADGSLWAWGTNFAGQLG--D 637

Query: 413 RGVSDKVLRPRILDSLRA------------------------------------HH---- 432
              + + +  R+   +RA                                    HH    
Sbjct: 638 GSTTSRAVPVRVQGPVRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALPV 697

Query: 433 -------VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                  V  +   L  ++ V   G L+ +G+N+  QLG
Sbjct: 698 RVPGMSGVVAVDVTLNLSLAVRSDGSLWAWGNNDVGQLG 736



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 138/317 (43%), Gaps = 29/317 (9%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 157
           + V   S +V  +AG+   +   RY      + SV+S G +  G LGHG      V    
Sbjct: 444 RQVPELSGVVAVAAGSSFSLAV-RY------DGSVWSWGDNAYGQLGHGSTDASSVP--- 493

Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALK 215
           ++    + VV V+A   HA  V   G V+  G  D      G    +   + P  V  L 
Sbjct: 494 LHVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQVPGLS 553

Query: 216 GVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSV 272
           G+    V+   +F   L +R  G V   G+NT  +LG G T  R  P  + AP    G+V
Sbjct: 554 GM----VSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPLRVNAP----GTV 605

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
             ++AG +Y +A+  +G ++++G+     LG G       P  +Q   R       ++AG
Sbjct: 606 ALLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPVRVQGPVRAST----LAAG 661

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
             H +A+ S G+++ WG  + G LG G      LP  +  +   +AV V      +  + 
Sbjct: 662 QSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALPVRVPGMSGVVAVDVT--LNLSLAVR 719

Query: 393 DTGSVYGFGWMGFGSLG 409
             GS++ +G    G LG
Sbjct: 720 SDGSLWAWGNNDVGQLG 736


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 16/295 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           + +V+    H+  V +SG++ TCG  DN     G+ +        +  E++       V 
Sbjct: 106 IKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIA-----DVA 160

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSY 281
           AG   T   + +G ++  GSN HGQLGH DT  +    P+ I  L +   + Q+A G  +
Sbjct: 161 AGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDA-PIKQVACGSYH 219

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            +A+T +G VY++G G++  LGHG   DE  P+ ++     G ++  + AG E+  A+ +
Sbjct: 220 SMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALV--GENISSIHAGFEYSSAVST 277

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           SG V+ WG G+   LG GD+ D+  P  L    S    Q+         +  +G ++ +G
Sbjct: 278 SGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPTS--IRQLAFGSFHAAAVSHSGMLFTWG 335

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDS-LRAHHVSQISTGLYHTVVVTDRGRLFGF 455
               G LG   +   + +L P +LD+  +  +  Q++ G  HT+VVT  G +F F
Sbjct: 336 HATHGPLGHGLKS-PNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSF 389



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 136/291 (46%), Gaps = 15/291 (5%)

Query: 116 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G  H+++++ S  + +CG +  G LG G        F  +       +  V+A   
Sbjct: 108 KVACGGAHSMIVTESGRLLTCGLNDNGQLGLG-NLENASEFEEVK--GTESIADVAAGFW 164

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           H     + G+++  G N     GH DT  +    P+ +  L+  P KQV  G   +  LT
Sbjct: 165 HTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALT 224

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVY 292
             G V+T G   HG+LGHG T D   PK +  L  VG ++  I AG  Y  AV+ +G V+
Sbjct: 225 KDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEAL--VGENISSIHAGFEYSSAVSTSGKVF 282

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G G  + LG G++ D+L P  +         + +++ G  H  A+  SG ++TWG   
Sbjct: 283 VWGYGHFYVLGQGDKKDQLAPVVLDF----PTSIRQLAFGSFHAAAVSHSGMLFTWGHAT 338

Query: 353 CGALGHGDEIDKTLPEPL---SSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
            G LGHG +    + EP    +  +   + QV    + T V+  TG V+ F
Sbjct: 339 HGPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSF 389



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 21/286 (7%)

Query: 201 TNRPIFR-----PRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           T+ PIF      P  VE   L     K+V  G   +  +T  G + TCG N +GQLG G+
Sbjct: 81  TDAPIFEVIQKEPEKVEKPVLPAKLIKKVACGGAHSMIVTESGRLLTCGLNDNGQLGLGN 140

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-- 311
             +    + +   E   S+  +AAG  + LA +  G +Y++GS  +  LGH +   +L  
Sbjct: 141 LENASEFEEVKGTE---SIADVAAGFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAV 197

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
           +P+ I   R   I   +V+ G  H +AL   G VYTWG G  G LGHG   D+ +P+ + 
Sbjct: 198 EPQEILLLRDAPIK--QVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVE 255

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           +L       + A    +  +  +G V+ +G+  F  LG  D+      L P +LD   + 
Sbjct: 256 ALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHFYVLGQGDK---KDQLAPVVLDFPTS- 311

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH--DTLRGCLEPT 475
            + Q++ G +H   V+  G LF +G      LGH   +    LEPT
Sbjct: 312 -IRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLKSPNIILEPT 356



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 15/219 (6%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G YH++ L  +  V++ G    G LGHG    + +   R+      ++  + A   
Sbjct: 212 QVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTEDEFMP-KRVEALVGENISSIHAGFE 270

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC--KQVTAGLNFTGFL 232
           +++ V  SG+VF  G    +  G  D      + +L   +   P   +Q+  G      +
Sbjct: 271 YSSAVSTSGKVFVWGYGHFYVLGQGDK-----KDQLAPVVLDFPTSIRQLAFGSFHAAAV 325

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPT----PKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  G + T G  THG LGHG  L  P     P  +    ++ +  Q+A G  + L VTG 
Sbjct: 326 SHSGMLFTWGHATHGPLGHG--LKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGT 383

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           G V+SFG G    LG G   D  +P+ I  F  K +  V
Sbjct: 384 GDVFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQV 422



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 16/159 (10%)

Query: 332 GDEHVVALDSSGYVYTWGK---GYCGALGHGD----EIDKTLPEPLSS--LKSHLAVQVC 382
           G E  V L  +  +++WG    G  G+ GH D    E+ +  PE +    L + L  +V 
Sbjct: 51  GREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKKVA 110

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                + ++ ++G +   G    G LG  +   + +    +  +S     ++ ++ G +H
Sbjct: 111 CGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTES-----IADVAAGFWH 165

Query: 443 TVVVTDRGRLFGFGDNERAQLG-HDT-LRGCLEPTEIFI 479
           T+  + +G+L+ +G N+  QLG HDT ++  +EP EI +
Sbjct: 166 TLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILL 204


>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
 gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
          Length = 453

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 184/423 (43%), Gaps = 50/423 (11%)

Query: 97  LQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSF- 155
           ++ +    +I++    N+   TT +Y         ++SCG  + G LG   E  +  SF 
Sbjct: 23  IKPIISKQNIIQFLNINKRNYTTNKY---------LYSCGCGIDGKLGIDNELVKFESFP 73

Query: 156 ---TRIN----------FPSAAHVVQVSASENHAAFV-LQSGQVFTCGDNSSFCCG--HR 199
              T+ +          +        +     H   V  +  Q+++CG  S       ++
Sbjct: 74  TKLTKFDNGENNGASQRYQDNLECKDIVCGHYHTMLVSKEKDQLYSCGWTSFVAMDRVNK 133

Query: 200 DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 259
           +TN     P LV  LK    KQV  G   T  LT    V + G  +  QLG G T ++P 
Sbjct: 134 ETNFKSIIPSLVTPLKDFKIKQVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPL 193

Query: 260 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQT 318
           P  I  L ++G+++++  G  + L +T +G ++++G   +   GHG   + +  P+ I+T
Sbjct: 194 PVEIESLSKLGNIIKLECGWGHSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHIPKMIKT 253

Query: 319 -FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 377
            ++ K I       G +  +A+ + G V +WG G  G LGHGD  +   P+ + S++  +
Sbjct: 254 NYKFKNIF-----TGSDFNLAITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLV 308

Query: 378 AVQVCARKR------------KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
              +    R               ++ + G +   GW G G LG   +G  D  L P  L
Sbjct: 309 HTNLINTNRIYEYKMVACGFSHALIIDNDGKLLTLGWNGNGQLGSGVKG--DNHLVPTKL 366

Query: 426 D-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG-CLEPTEIF-IQEM 482
           +       V ++S G  H+  +T+ G+L+ +G+  + +LG+    G  L P E+  I E 
Sbjct: 367 EFDFDGEKVVKVSAGRNHSACITESGKLYIWGNGNKGKLGNGKSVGDQLTPLELIDIDEN 426

Query: 483 EED 485
             D
Sbjct: 427 NTD 429


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 122/248 (49%), Gaps = 5/248 (2%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           Q  +G      L     VH CG N+ GQLG         P+ I  L  +  V  ++ G  
Sbjct: 33  QAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNL-PVDLVSCGKE 91

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           + LAV   G V+++G GS+  LG G+  +    P+ I+     GI ++++S G  H +AL
Sbjct: 92  HSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKAL--TGIKIIQISCGYYHSLAL 149

Query: 340 DSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
              G V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  +G+ +
Sbjct: 150 SKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSF 209

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           G+G    G L F    V  +  +PR + +L+   V  IS G  HT V+T   ++F FGDN
Sbjct: 210 GWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDN 269

Query: 459 ERAQLGHD 466
              QLGH+
Sbjct: 270 SFGQLGHN 277



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 145/297 (48%), Gaps = 14/297 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           ++Q ++ E HA  +L +  V  CGDNS    G R       +P  ++AL  +P   V+ G
Sbjct: 31  LLQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGK-QPEPIQALVNLPVDLVSCG 89

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLA 284
              +  +  +G V   G  + GQLG G   +    P+ I  L  +  ++QI+ G  + LA
Sbjct: 90  KEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGI-KIIQISCGYYHSLA 148

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           ++ +G V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  SG
Sbjct: 149 LSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSLSG 206

Query: 344 YVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             + WG    G L   G+   +    P  + +LK+   V +      T VL     V+ F
Sbjct: 207 TSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTF 266

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGFG 456
           G   FG LG    GVS +   P++++ +    VSQI  G YHT+  V   G++  FG
Sbjct: 267 GDNSFGQLG--HNGVS-QTTGPQLVEGI-GGPVSQIDCGSYHTLAYVYTTGQVVSFG 319



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 152/351 (43%), Gaps = 26/351 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGH-------GPETTQCVSFTRINFPSAAHV 166
           +Q  +G  H LL+ +N  V +CG +  G LG         PE  Q +    +N P    V
Sbjct: 32  LQAASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQAL----VNLP----V 83

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G        F P+ ++AL G+   Q++ G 
Sbjct: 84  DLVSCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGY 143

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+  G V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 144 YHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 202

Query: 286 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           + +G  + +G+ S   L   G+       +PR++   +  G  VV +S G EH   L  +
Sbjct: 203 SLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLG--VVYISCGYEHTAVLTQN 260

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
             V+T+G    G LGH      T P+ +  +   ++   C        +  TG V  FG 
Sbjct: 261 DQVFTFGDNSFGQLGHNGVSQTTGPQLVEGIGGPVSQIDCGSYHTLAYVYTTGQVVSFGR 320

Query: 403 MG--FGSLGFPDRGVSDKVLRPRI-LDSLRAHHVSQISTGLYHTVVVTDRG 450
                 +   P+    +  +   I  D LR   +  I  G Y   V T +G
Sbjct: 321 EPSHTSNPTHPETPSENSDISCLISADDLRDIQIKHIFAGTYADFVTTHQG 371


>gi|413938284|gb|AFW72835.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 801

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 146/330 (44%), Gaps = 35/330 (10%)

Query: 153 VSFTRINFP------SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 206
           VS T I+ P          V  ++  E HAA V + G+VF+ G+ +    GH+ T+  + 
Sbjct: 7   VSGTNISLPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHK-TSDSVS 65

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIA 264
            P+++++L   P K +  G  +T  +++ G ++  G   H      +   R    P  + 
Sbjct: 66  DPKIIDSLASTPMKTIALGAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLI 125

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
              +  SV +IA G  +   V+  G ++++G G+   LGHG+    +QP+ +++ R  G+
Sbjct: 126 RTSDGISVAKIACGQWHTAIVSSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLR--GL 183

Query: 325 HVVRVSAGDEHVVALDSS----------GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            V  V+ G  H  A+  +          G ++TWG      LGH D+  K +P  + SL 
Sbjct: 184 RVKSVACGPWHTAAIVETSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESLI 243

Query: 375 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
                  C      F  V  G V+  G    G LG P    SD      +   L+   V 
Sbjct: 244 D------C-----DFTQVSCGVVFTIGSKDHGQLGNPR---SDSACICMVEGPLKTEFVK 289

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            IS+G  H  V+T  G++F +G     QLG
Sbjct: 290 DISSGNSHVAVLTMNGKVFTWGKGTEGQLG 319



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 129/311 (41%), Gaps = 56/311 (18%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 174
           I  G  H  +++    VFS G    G LGH  +T+  VS  +I +  ++  +  ++    
Sbjct: 29  IACGEKHAAIVTKQGKVFSWGEENGGRLGH--KTSDSVSDPKIIDSLASTPMKTIALGAK 86

Query: 175 HAAFVLQSGQVFTCGDN-SSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           +   V  SG+++  G+   S    +    R P F  +L+    G+   ++  G   T  +
Sbjct: 87  YTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLIRTSDGISVAKIACGQWHTAIV 146

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN---- 288
           +  G + T G  T G LGHGDT     PK +  L  +  V  +A GP +  A+       
Sbjct: 147 SSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLRGL-RVKSVACGPWHTAAIVETSGTP 205

Query: 289 ------GVVYSFGSGSNFCLGHGEQHDELQPRAIQTF----------------------- 319
                 G ++++G+ S   LGH ++  +L P  +++                        
Sbjct: 206 KSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESLIDCDFTQVSCGVVFTIGSKDHGQ 265

Query: 320 ----------------RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
                             K   V  +S+G+ HV  L  +G V+TWGKG  G LG GD +D
Sbjct: 266 LGNPRSDSACICMVEGPLKTEFVKDISSGNSHVAVLTMNGKVFTWGKGTEGQLGLGDYLD 325

Query: 364 KTLPEPLSSLK 374
           +T P  + +L+
Sbjct: 326 RTFPTLVEALE 336



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 18/223 (8%)

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           ++  V  IA G  +   VT  G V+S+G  +   LGH        P+ I +     +  +
Sbjct: 22  QILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPMKTI 81

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLSSLKSHLAV-QVCAR 384
            +  G ++  A+  SG +Y WG+G        ++  ++   P  L      ++V ++   
Sbjct: 82  AL--GAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLIRTSDGISVAKIACG 139

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
           +  T ++  TG ++ +G   FG LG  D   +  V++P+ ++SLR   V  ++ G +HT 
Sbjct: 140 QWHTAIVSSTGKLFTYGHGTFGVLGHGD---TRSVVQPKEVESLRGLRVKSVACGPWHTA 196

Query: 445 VVTDR----------GRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            + +           G+LF +G+    +LGH   +  L PT +
Sbjct: 197 AIVETSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRV 239



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 3/101 (2%)

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           GH    + +LP  L S +      +   ++   ++   G V+ +G    G LG      S
Sbjct: 5   GHVSGTNISLPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHK---TS 61

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           D V  P+I+DSL +  +  I+ G  +T  V+  G L+ +G+
Sbjct: 62  DSVSDPKIIDSLASTPMKTIALGAKYTCAVSVSGELYEWGE 102



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 30/56 (53%)

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           PR+L S +   V  I+ G  H  +VT +G++F +G+    +LGH T     +P  I
Sbjct: 15  PRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSDSVSDPKII 70


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 145/314 (46%), Gaps = 23/314 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  +S    HAA + + G++F+ G       GH+  N  +  P+LV++L G+  K V  G
Sbjct: 302 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHK-INMDLDHPKLVDSLNGIAAKSVACG 360

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQL--GHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  LT  G V+T G +  G       ++  R  P+ ++ PL+ + S+  +A G  + 
Sbjct: 361 EYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGI-SISNVACGEWHT 419

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             V+  G ++++G G+   LGHG      QP+ +++    G+ V  V+ G  H  A+   
Sbjct: 420 AVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLN--GLCVKSVACGSWHTAAIVDI 477

Query: 340 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                    + G ++TWG G  G LGHGD   K LP  ++ L      QV   +  T  L
Sbjct: 478 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGL 537

Query: 392 VDTGSVYGFGWMGFGSLG-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
            + G VY  G    G LG    R  S  ++  +    L+   V  IS+G YH   +T  G
Sbjct: 538 TNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGK----LKEEFVKAISSGSYHVASLTSTG 593

Query: 451 RLFGFGDNERAQLG 464
           R++ +G     QLG
Sbjct: 594 RVYTWGKGAHGQLG 607



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  V+  E H A V   G++FT GD +    GH +    + +P+ VE+L G+  K V  G
Sbjct: 409 ISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNL-ISLSQPKEVESLNGLCVKSVACG 467

Query: 226 LNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
              T            F +  G + T G    G+LGHGD   +  P  +APL +     Q
Sbjct: 468 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDC-DFAQ 526

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++ G    + +T  G VY+ GS  +  LG+    D     AI   + K   V  +S+G  
Sbjct: 527 VSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRD--ASVAIVEGKLKEEFVKAISSGSY 584

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
           HV +L S+G VYTWGKG  G LG GD  D+ LP  + +L
Sbjct: 585 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEAL 623



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 148/358 (41%), Gaps = 32/358 (8%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 178
           G++  L+  +  +FS G   CG LGH  +    +   + ++  +      V+  E     
Sbjct: 309 GKHAALITKHGEIFSWGQGKCGRLGH--KINMDLDHPKLVDSLNGIAAKSVACGEYQTCA 366

Query: 179 VLQSGQVFTCGDN---SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           + ++G+V+T GD+   + F C     +R + + +L   LKG+    V  G   T  ++  
Sbjct: 367 LTKAGEVYTWGDSRFGADFDCEENSRSRWLPQ-KLSGPLKGISISNVACGEWHTAVVSAC 425

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------- 285
           G + T G  T G LGHG+ +    PK +  L  +  V  +A G  +  A+          
Sbjct: 426 GRLFTYGDGTFGALGHGNLISLSQPKEVESLNGL-CVKSVACGSWHTAAIVDIMIDRFKF 484

Query: 286 -TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +  G ++++G G    LGHG+   +L P  +           +VS G    V L + G 
Sbjct: 485 KSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLV--DCDFAQVSCGRMLTVGLTNMGR 542

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VYT G    G LG+    D ++      LK      + +       L  TG VY +G   
Sbjct: 543 VYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGA 602

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG--------LYHTVVVTDRGRLFG 454
            G LG  D   SD    P  +++L    V  I+ G        L+ ++  +D+   +G
Sbjct: 603 HGQLGLGD---SDDRNLPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYG 657



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 20/276 (7%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+L+E+   +  + ++ G      +T  G + + G    G+LGH   +D   PK +  L 
Sbjct: 291 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN 350

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            + +   +A G     A+T  G VY++G    G++F      +   L  +       KGI
Sbjct: 351 GIAAK-SVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL--KGI 407

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
            +  V+ G+ H   + + G ++T+G G  GALGHG+ I  + P+ + SL       V   
Sbjct: 408 SISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACG 467

Query: 385 KRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
              T  +VD            G ++ +G    G LG    G +++ L P  +  L     
Sbjct: 468 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLG---HGDNERKLLPTCVAPLVDCDF 524

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
           +Q+S G   TV +T+ GR++  G +   QLG+ + R
Sbjct: 525 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSR 560



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 2/169 (1%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L P+ +++     + V  +S G +H   +   G +++WG+G CG LGH   +D   P+
Sbjct: 287 DALLPKLLESTMM--LDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPK 344

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            + SL    A  V   + +T  L   G VY +G   FG+    +     + L  ++   L
Sbjct: 345 LVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL 404

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   +S ++ G +HT VV+  GRLF +GD     LGH  L    +P E+
Sbjct: 405 KGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEV 453



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 19/218 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   +T +G ++S+G G    LGH    D   P+ + +    GI    V+ 
Sbjct: 302 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN--GIAAKSVAC 359

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLS-SLKSHLAVQVCARKRKT 388
           G+    AL  +G VYTWG    GA    +E  ++  LP+ LS  LK      V   +  T
Sbjct: 360 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 419

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
            V+   G ++ +G   FG+LG    G    + +P+ ++SL    V  ++ G +HT  + D
Sbjct: 420 AVVSACGRLFTYGDGTFGALG---HGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVD 476

Query: 449 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
                       G+LF +GD ++ +LGH      L PT
Sbjct: 477 IMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPT 514


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 165/358 (46%), Gaps = 24/358 (6%)

Query: 123 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA-SENHAAFVL 180
           H+L++ S+ +V++ GS+  G LG G +  + V    +     + VV V+A S  H+  V+
Sbjct: 309 HSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGL---SGVVAVAAGSGQHSVAVM 365

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI-RGHVH 239
            +G+V+T G N     G   ++     P+   AL  V    V AG  + G  +   G V 
Sbjct: 366 ANGEVWTWGHNVEGQLGEGSSSYSAV-PKRSHAL--VERTSVAAG-RYHGLASKPDGTVW 421

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
             G N  GQLG G T  R  P  +  L  +   V +AAG    LA+  +G V+++G  +N
Sbjct: 422 AWGDNAKGQLGDGTTAQRLLPTQVPGLTNM---VAVAAGHHSSLALKADGTVWAWGDNAN 478

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG+G   D   P  +         VV ++AG  H +A+ + G ++TWG    G LG G
Sbjct: 479 GQLGNGSTTDRSNPTQVPGL----TGVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDG 534

Query: 360 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
             +D+ +P  +  +     V V A    + V+   G+V+ +G    G LG          
Sbjct: 535 TTVDRPIPTQVPGVTG--VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGG-----GTTT 587

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +RP    +     V  I+ GLYH++ +   G ++ +G N   QLG+        PT++
Sbjct: 588 IRPVPSQTPNLTGVVAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQV 645



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 174/414 (42%), Gaps = 68/414 (16%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N + +  G + +L L ++ +V++ G +  G LG+G  TT   + T++  P    VV ++A
Sbjct: 450 NMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNG-STTDRSNPTQV--PGLTGVVSIAA 506

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
              HA  V   G ++T GDN++   G   T +RPI  P  V  + GV    V AGL  + 
Sbjct: 507 GPGHALAVKADGTLWTWGDNNTGQLGDGTTVDRPI--PTQVPGVTGVVS--VAAGLYHSL 562

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            + + G V   GSN  GQLG G T  RP P     L     VV I AG  + LA+  +G 
Sbjct: 563 VVKVDGTVWAWGSNYEGQLGGGTTTIRPVPSQTPNLT---GVVAITAGLYHSLALKTDGT 619

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+++G   +  LG+G    +  P  +  F       V + AG  H +A+ + G V+TWG 
Sbjct: 620 VWAWGYNLHGQLGNGNTTTQQVPTQVPGFSGG----VSLGAGIYHSLAIKTDGSVWTWGY 675

Query: 351 GYCGALGHGD-----------------------------EIDKTLPEPLSSLKSHL---- 377
            Y G LG G                                D T     S+ K  L    
Sbjct: 676 NYRGQLGDGTTTSRTTPTQVAGFTGVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGS 735

Query: 378 --------------AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
                         A  + A  R T      G+V+ +G   +G LG    G +     P 
Sbjct: 736 ARWHYAPTLSRLVGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLG---DGTTLATRSPA 792

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +  L    V  ++ G  H VVV   G ++ +G+N + QLG  T    L PT++
Sbjct: 793 QVSGLT--DVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQV 844



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 160/364 (43%), Gaps = 32/364 (8%)

Query: 121  RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
            R+     S+ +V++ G +  G LG G   T   + +         V  ++A E H   V 
Sbjct: 758  RFTAARKSDGTVWAWGDNTYGQLGDG---TTLATRSPAQVSGLTDVEGLAAGEGHVVVVK 814

Query: 181  QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
              G V+T G+N+    G   T R +  P  V  L GV    V AG   +  L   G V  
Sbjct: 815  MDGTVWTWGNNAKGQLGDGTTTRRLV-PTQVPGLTGVVA--VAAGYAHSLALKADGTVWG 871

Query: 241  CGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
             G N +GQLG G T  R     +AP +  G   V+ +A+G  + LA   +G ++++G  +
Sbjct: 872  WGENIYGQLGDGTTTQR-----VAPTQAQGLTVVLSMASGTYHGLARKADGTLWAWGYNA 926

Query: 299  NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            +  LG G     L P  + +       VV +SA  +H +AL   G V+ WG    G LG 
Sbjct: 927  HGQLGIGTTTTRLAPTLVPSLS----GVVSLSATHQHSLALKPDGTVWAWGYNSNGQLGD 982

Query: 359  GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG-VSD 417
            G    + +P    SL S  A  V A    +  +   G+V+        S G  DRG +  
Sbjct: 983  GTTTTRHVPTQAPSLSSVKA--VSAGFEYSLAVKADGTVW--------SWGINDRGQLGS 1032

Query: 418  KVLRPRILDSLRA--HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGCLEP 474
                PR   +  A  + V+ +     H +VV+  G + GFGDNE  QLG  DTL   L P
Sbjct: 1033 GTATPRATPTQVAGLNSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLI-RLAP 1091

Query: 475  TEIF 478
             +++
Sbjct: 1092 NQVW 1095



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 168/414 (40%), Gaps = 74/414 (17%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  GR+HTL + S+ +V++ G +  G LG+G    Q V           ++  V A + H
Sbjct: 53  VAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGL---WNISAVGAGDLH 109

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDT---NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           +  +   G V+T G N+    G   T     P+  P L E ++      V AG + +  L
Sbjct: 110 SLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLGEVVR------VAAGFSHSLAL 163

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   GSN  G+LG G T  R  P  +  L    ++  IAAG ++ LA+ G G V+
Sbjct: 164 KTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLP---TIKAIAAGNAHSLALDGTGRVW 220

Query: 293 SFGSGSNFCLGHGEQHDELQPRAI------------------------------------ 316
           ++GS SN  LG       + P  +                                    
Sbjct: 221 AWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADGTTWVWGANTYGQL 280

Query: 317 ---QTFRRKGIHVVRVSAG-------DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
               T  R     V   AG       + H + L S G V+TWG    G LG G +  + +
Sbjct: 281 GDGTTTSRSAPQQVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLV 340

Query: 367 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           P  +  L   +AV   + +    V+ + G V+ +G    G LG    G S     P+   
Sbjct: 341 PVQVMGLSGVVAVAAGSGQHSVAVMAN-GEVWTWGHNVEGQLG---EGSSSYSAVPK--- 393

Query: 427 SLRAHHV---SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             R+H +   + ++ G YH +     G ++ +GDN + QLG  T    L PT++
Sbjct: 394 --RSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQV 445



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 152/364 (41%), Gaps = 22/364 (6%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + IT G YH+L L ++ +V++ G +L G LG+G  TTQ V       P  +  V + A  
Sbjct: 602 VAITAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVP---TQVPGFSGGVSLGAGI 658

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +   G V+T G N     G   T       + V    GV    + AG   +  L 
Sbjct: 659 YHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQ-VAGFTGVSF--LAAGEFHSVALR 715

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G     GSN  GQLG G       P     L  +     +AAG  +  A   +G V++
Sbjct: 716 TDGTAWAWGSNDKGQLGDGSARWHYAPT----LSRLVGARGLAAGDRFTAARKSDGTVWA 771

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G  +   LG G       P  +         V  ++AG+ HVV +   G V+TWG    
Sbjct: 772 WGDNTYGQLGDGTTLATRSPAQVSGL----TDVEGLAAGEGHVVVVKMDGTVWTWGNNAK 827

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G    + +P  +  L     V V A    +  L   G+V+G+G   +G LG    
Sbjct: 828 GQLGDGTTTRRLVPTQVPGLTG--VVAVAAGYAHSLALKADGTVWGWGENIYGQLG---D 882

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G + + + P     L    V  +++G YH +     G L+ +G N   QLG  T    L 
Sbjct: 883 GTTTQRVAPTQAQGLTV--VLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLA 940

Query: 474 PTEI 477
           PT +
Sbjct: 941 PTLV 944


>gi|110637510|ref|YP_677717.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
 gi|110280191|gb|ABG58377.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
          Length = 911

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 175/381 (45%), Gaps = 20/381 (5%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFT 156
            +V+  S +   +  +   +  G  HTL I SN ++++ G ++ G LG+G  T    +  
Sbjct: 305 NTVQQDSPVRVGTDNDWTTLAAGSNHTLAIKSNGTLWAWGHNVRGNLGNGTATLDPATLP 364

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
            +   + A  ++VSA  +H+  +  +G ++  G N     G+          ++  A   
Sbjct: 365 -VQVGTDADWIRVSAGLDHSVALKANGTLWAWGYNVRGQLGYGSGTDKHLPVQIGTAHTW 423

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
           V    + AG   T  +   G + T G NT+ QLG G T D+P P SI    +    + IA
Sbjct: 424 VA---INAGTYHTIGVKADGSLWTWGDNTNAQLGDGGTADQPVPHSIRTAPD--DWISIA 478

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           A  ++ + +  NG ++++G       G  +    +Q  + Q ++        ++ G  ++
Sbjct: 479 ASNAFSMGLKANGTIWTWGLNPFETDGQYKNSSPVQTGSDQNWKS-------IATGSNYI 531

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
           +AL + G ++ WG  + G LG G E  + LP+ + +  + +++   A   ++F +   GS
Sbjct: 532 LALKADGTLWAWGDNFSGQLGDGTEQPRMLPKQIGTATTWVSI-AAASGVQSFGIQADGS 590

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           ++ +G    G LG    G + K L P  + +        I TG+ HT+ +   G L+G+G
Sbjct: 591 LWSWGHNYDGELGL---GTNLKTLVPTRVGT--GTDWISIKTGVGHTLGIKSDGTLWGWG 645

Query: 457 DNERAQLGHDTLRGCLEPTEI 477
            N + QLG  TL     P ++
Sbjct: 646 TNRQGQLGDGTLVNKYVPVQL 666



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 16/245 (6%)

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G +   G N++GQLG G T+DR TP  I    ++ + V +A G SY LA+  +G ++S+G
Sbjct: 138 GELWGWGYNSNGQLGDGTTMDRRTPVKIGI--DI-NWVAVATGSSYTLALKADGTLWSWG 194

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                 LG G   D   P  I T +         S+G    + + ++G ++TWG    G 
Sbjct: 195 KNQRGQLGDGTTIDRHSPVQIGTEQTWTGIAACFSSG----IGIKANGTLWTWGFNNGGE 250

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G+  +K  P  + + ++ L   V        + VD GS++G+G    G +G  +   
Sbjct: 251 LGIGNNDEKHTPVQVGADQNWL-YAVAGSNHIVALKVD-GSLWGWGLNEAGEIGNGNTVQ 308

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
            D  +R    +       + ++ G  HT+ +   G L+ +G N R  LG+ T    L+P 
Sbjct: 309 QDSPVRVGTDNDW-----TTLAAGSNHTLAIKSNGTLWAWGHNVRGNLGNGT--ATLDPA 361

Query: 476 EIFIQ 480
            + +Q
Sbjct: 362 TLPVQ 366



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/409 (23%), Positives = 168/409 (41%), Gaps = 57/409 (13%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N + + TG  +TL L ++ +++S G +  G LG G   T     + +   +      ++A
Sbjct: 170 NWVAVATGSSYTLALKADGTLWSWGKNQRGQLGDG---TTIDRHSPVQIGTEQTWTGIAA 226

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             +    +  +G ++T G N+    G  + N     P  V A +        AG N    
Sbjct: 227 CFSSGIGIKANGTLWTWGFNNGGELGIGN-NDEKHTPVQVGADQN--WLYAVAGSNHIVA 283

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           L + G +   G N  G++G+G+T+ + +P  +    +      +AAG ++ LA+  NG +
Sbjct: 284 LKVDGSLWGWGLNEAGEIGNGNTVQQDSPVRVGTDNDW---TTLAAGSNHTLAIKSNGTL 340

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G      LG+G     L P  +          +RVSAG +H VAL ++G ++ WG  
Sbjct: 341 WAWGHNVRGNLGNGTA--TLDPATLPVQVGTDADWIRVSAGLDHSVALKANGTLWAWGYN 398

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---------- 401
             G LG+G   DK LP  + +  +H  V + A    T  +   GS++ +G          
Sbjct: 399 VRGQLGYGSGTDKHLPVQIGT--AHTWVAINAGTYHTIGVKADGSLWTWGDNTNAQLGDG 456

Query: 402 -----------------WMGFG-----SLGFPDRG-VSDKVLRPRILDSLRAH------- 431
                            W+        S+G    G +    L P   D    +       
Sbjct: 457 GTADQPVPHSIRTAPDDWISIAASNAFSMGLKANGTIWTWGLNPFETDGQYKNSSPVQTG 516

Query: 432 ---HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
              +   I+TG  + + +   G L+ +GDN   QLG  T +  + P +I
Sbjct: 517 SDQNWKSIATGSNYILALKADGTLWAWGDNFSGQLGDGTEQPRMLPKQI 565



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 139/354 (39%), Gaps = 22/354 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G YHT+ + ++ S+++ G +    LG G    Q V  +    P     + ++AS 
Sbjct: 424 VAINAGTYHTIGVKADGSLWTWGDNTNAQLGDGGTADQPVPHSIRTAPD--DWISIAASN 481

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  +  +G ++T G N     G    + P      V+       K +  G N+   L 
Sbjct: 482 AFSMGLKANGTIWTWGLNPFETDGQYKNSSP------VQTGSDQNWKSIATGSNYILALK 535

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G +   G N  GQLG G    R  PK I       S+   AA       +  +G ++S
Sbjct: 536 ADGTLWAWGDNFSGQLGDGTEQPRMLPKQIGTATTWVSIA--AASGVQSFGIQADGSLWS 593

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G   +  LG G     L P  + T    G   + +  G  H + + S G ++ WG    
Sbjct: 594 WGHNYDGELGLGTNLKTLVPTRVGT----GTDWISIKTGVGHTLGIKSDGTLWGWGTNRQ 649

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G  ++K +P  L + +    + +         L   G+++ +G   +G +     
Sbjct: 650 GQLGDGTLVNKYVPVQLGTDRDW--INIAGGTIHNICLKSNGTLWAWGRNNYGQV----- 702

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           G  + + + R++      +   +   L  +  +   G L+  G N   QLG  T
Sbjct: 703 GTGNLITQDRMVQISAEQNWIDVYASLDQSFAIRADGSLWACGLNSSGQLGDGT 756



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 15/266 (5%)

Query: 101 EHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 159
           ++SS +   S  N   I TG  + L L ++ ++++ G +  G LG G E  + +      
Sbjct: 508 KNSSPVQTGSDQNWKSIATGSNYILALKADGTLWAWGDNFSGQLGDGTEQPRMLP---KQ 564

Query: 160 FPSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
             +A   V ++A+    +F +Q+ G +++ G N     G   TN     P  V    G  
Sbjct: 565 IGTATTWVSIAAASGVQSFGIQADGSLWSWGHNYDGELG-LGTNLKTLVPTRVGT--GTD 621

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
              +  G+  T  +   G +   G+N  GQLG G  +++  P  +    +    + IA G
Sbjct: 622 WISIKTGVGHTLGIKSDGTLWGWGTNRQGQLGDGTLVNKYVPVQLGTDRDW---INIAGG 678

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             + + +  NG ++++G  +   +G G      Q R +Q    +  + + V A  +   A
Sbjct: 679 TIHNICLKSNGTLWAWGRNNYGQVGTGNL--ITQDRMVQISAEQ--NWIDVYASLDQSFA 734

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDK 364
           + + G ++  G    G LG G  +D+
Sbjct: 735 IRADGSLWACGLNSSGQLGDGTSVDR 760



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 14/200 (7%)

Query: 113 NQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           + + I TG  HTL I S+ +++  G++  G LG G   T    +  +   +    + ++ 
Sbjct: 621 DWISIKTGVGHTLGIKSDGTLWGWGTNRQGQLGDG---TLVNKYVPVQLGTDRDWINIAG 677

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              H   +  +G ++  G N+    G   T   I + R+V+         V A L+ +  
Sbjct: 678 GTIHNICLKSNGTLWAWGRNN---YGQVGTGNLITQDRMVQISAEQNWIDVYASLDQSFA 734

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +   G +  CG N+ GQLG G ++DR    ++   ++    + +AAG  + LA+  N + 
Sbjct: 735 IRADGSLWACGLNSSGQLGDGTSVDRAAMVAVGTNQK---WISLAAGNYHTLALPVNRIQ 791

Query: 292 YSFGSGSNFCLGHGEQHDEL 311
           Y  G+G+ +   +GE  D +
Sbjct: 792 YC-GTGTAY---YGELGDHV 807


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 181/435 (41%), Gaps = 87/435 (20%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHG-----PETTQ 151
           Q V   SD+V  +AG         +H+L L ++ +V++ GS+  G LG G     P   Q
Sbjct: 143 QKVPGLSDVVAVAAG--------EFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQ 194

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            V  T         VV ++A  + +  V   G V+  G N S   G   T      P  V
Sbjct: 195 VVGLT--------GVVALAAGFDFSLAVRSDGTVWAWGANGSGQLGD-GTYIQRLAPTQV 245

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP---------KS 262
             L+GV    VTAGL     L   G V   GSN+ GQ+G G   DRP+P         K+
Sbjct: 246 SQLQGVSA--VTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKA 303

Query: 263 IA----------------------------------PL----EEVGSVVQIAAGPSYMLA 284
           +A                                  PL      +G+V  +AAG  + + 
Sbjct: 304 VAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGLGAVTSLAAGTQHAVV 363

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  +G ++++G G+   LGHG     L P  +        +V  V++G  H VA  S G 
Sbjct: 364 LRADGTLWTWGHGATGQLGHGSSERMLSPEVVTRLS----NVASVASGSFHSVAALSDGS 419

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           V+TWG+   G LG G   ++ LP  +  L     V V A    +F L   G+V+G+G   
Sbjct: 420 VWTWGRNTNGQLGDGTTTERHLPVRVPGLSG--VVSVSASGHHSFALRSDGTVWGWGRNA 477

Query: 405 FGSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
            G +G  D    D+    R+  L S++A     +++G  H V +   G ++ +G N   Q
Sbjct: 478 QGQMG--DGTTKDRASPARVEGLSSVKA-----LASGGSHMVALRTDGTVWTWGYNGAGQ 530

Query: 463 LGHDTLRGCLEPTEI 477
           LG  T      P ++
Sbjct: 531 LGDGTTTDRRAPVQV 545



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 171/361 (47%), Gaps = 18/361 (4%)

Query: 120  GRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
            G  H L++S + +V++ G++  G LG G  TT   S  R+   SAA  + VS  + ++  
Sbjct: 907  GEAHALVVSQDGTVWAWGANGRGQLGDG-TTTSSASPVRVAGLSAA--MNVSVGQAYSLA 963

Query: 179  VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
            VL  G V++ G N S   G   TN     P+ V+ L  V  K VTAG +    +   G V
Sbjct: 964  VLPDGTVWSWGANDSGQLGD-GTNVARTTPKPVQDLADV--KAVTAGAHHVVAVRHDGTV 1020

Query: 239  HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
               G+N  GQ+G G    R  P  +   E + + V+ +AG  + LA+ G+    S+GS  
Sbjct: 1021 WGWGANAFGQVGDGTHFWRFRPVRV---EGLLNAVETSAGEQHSLALLGDERALSWGSHE 1077

Query: 299  NFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LG  E    L+P  ++    K  +  V VSA  +H  AL + G V TWG    G LG
Sbjct: 1078 YGQLGDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLG 1137

Query: 358  HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
             G    +  P  ++ L + +AV   A  R T  L   G+V+ +G   FG LG  D   + 
Sbjct: 1138 DGTTESRATPITVAGLGAMVAVAPAA--RHTLALRSDGTVWAWGDNTFGQLG--DGSNTR 1193

Query: 418  KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            + L  +++       V+ I+ G YH++ V + G ++ +G N   QLG  T+     PT +
Sbjct: 1194 RTLPVQVVG---LEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRM 1250

Query: 478  F 478
             
Sbjct: 1251 L 1251



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 148/360 (41%), Gaps = 62/360 (17%)

Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP-CKQ 221
           A+   +V+A   H+ +V Q+G V+  G N S   G   T    F+  + + + G+     
Sbjct: 47  ASATSKVAAGAQHSLYVTQAGTVWAWGGNGS---GQLGTGSVSFQRVVAQQVPGLTDVTS 103

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI------------------ 263
           + AG   +  L     V T G N  GQ+G G  +DRPTP+ +                  
Sbjct: 104 IAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSDVVAVAAGEFHSLA 163

Query: 264 ---------------------------APLEEVG--SVVQIAAGPSYMLAVTGNGVVYSF 294
                                      +P + VG   VV +AAG  + LAV  +G V+++
Sbjct: 164 LRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAW 223

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G+  +  LG G     L P  +   +     V  V+AG  H +AL S G V+ WG    G
Sbjct: 224 GANGSGQLGDGTYIQRLAPTQVSQLQ----GVSAVTAGLYHALALRSDGTVWAWGSNSSG 279

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            +G G   D+  P P+       A  V A+   + VL+D G V+ +G    G LG     
Sbjct: 280 QMGDGTWTDR--PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTA 337

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            S   +R R L +     V+ ++ G  H VV+   G L+ +G     QLGH +    L P
Sbjct: 338 DSPLPVRVRGLGA-----VTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSP 392



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 154/356 (43%), Gaps = 22/356 (6%)

Query: 117  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            +T G +H + +  + +V+  G++  G +G G   T    F  +      + V+ SA E H
Sbjct: 1004 VTAGAHHVVAVRHDGTVWGWGANAFGQVGDG---THFWRFRPVRVEGLLNAVETSAGEQH 1060

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP---RLVEALKGVPCKQVTAGLNFTGFL 232
            +  +L   +  + G +     G  ++  P   P   +L  +   VP   V+A       L
Sbjct: 1061 SLALLGDERALSWGSHEYGQLGDAESG-PSLEPVGVKLPSSKVLVPAVSVSAWHQHAAAL 1119

Query: 233  TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
               G V T G N  GQLG G T  R TP ++A L   G++V +A    + LA+  +G V+
Sbjct: 1120 LADGTVQTWGGNADGQLGDGTTESRATPITVAGL---GAMVAVAPAARHTLALRSDGTVW 1176

Query: 293  SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            ++G  +   LG G       P  +    +    V  ++AG  H +A+   G V+ WG   
Sbjct: 1177 AWGDNTFGQLGDGSNTRRTLPVQVVGLEK----VTAIAAGSYHSLAVREDGTVWAWGYNV 1232

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LG G    + +P  +  L    AV V   +  + +L   G+++  G    G LG   
Sbjct: 1233 FGQLGDGTMDARAVPTRMLGLDG--AVAVAGGEYHSLMLRFDGTLWATGNNSHGQLG--- 1287

Query: 413  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
             G     L P     +    V  +  G YH+V + + G ++ +G N + QLG  T+
Sbjct: 1288 EGTFTNRLSP--FQVVELDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTV 1341



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 157/356 (44%), Gaps = 24/356 (6%)

Query: 125 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           +L+ +  VF+ G +  G LG G   T   S   +       V  ++A   HA  +   G 
Sbjct: 313 VLLDDGGVFAWGLNSQGQLGIG---TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGT 369

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           ++T G  ++   GH  + R +  P +V  L  V    V +G   +      G V T G N
Sbjct: 370 LWTWGHGATGQLGHGSSER-MLSPEVVTRLSNVAS--VASGSFHSVAALSDGSVWTWGRN 426

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
           T+GQLG G T +R  P  +  L     VV ++A   +  A+  +G V+ +G  +   +G 
Sbjct: 427 TNGQLGDGTTTERHLPVRVPGLS---GVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGD 483

Query: 305 GEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
           G   D   P      R +G+  V+ +++G  H+VAL + G V+TWG    G LG G   D
Sbjct: 484 GTTKDRASPA-----RVEGLSSVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTD 538

Query: 364 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF-GSLGFPDRGVSDKVLRP 422
           +  P  ++ L       V A    +  L   G+V+ +G  GF G LG    G   +   P
Sbjct: 539 RRAPVQVTGLSG--VTSVAAGAYFSLALRTDGTVWAWG-DGFEGQLG---DGAGVQRASP 592

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
             +  L    V +++ G  H + V D G ++ +GDN   Q+G  +        +++
Sbjct: 593 VQVTGLT--RVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVY 646



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 159/361 (44%), Gaps = 25/361 (6%)

Query: 107 VETSAGNQMQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 165
           V T   N   + +G +H++  +S+ SV++ G +  G LG G  T + +    +  P  + 
Sbjct: 394 VVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLP---VRVPGLSG 450

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV VSAS +H+  +   G V+  G N+    G   T +    P  VE L  V  K + +G
Sbjct: 451 VVSVSASGHHSFALRSDGTVWGWGRNAQGQMGD-GTTKDRASPARVEGLSSV--KALASG 507

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            +    L   G V T G N  GQLG G T DR  P  +  L  V SV   AAG  + LA+
Sbjct: 508 GSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV---AAGAYFSLAL 564

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             +G V+++G G    LG G       P  +    R    VV+++AG  H +A+   G V
Sbjct: 565 RTDGTVWAWGDGFEGQLGDGAGVQRASPVQVTGLTR----VVKLAAGAAHGLAVRDDGTV 620

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           + WG    G +G G   D+     +  L       V      +  L   G++  +G   +
Sbjct: 621 WAWGDNTEGQMGDGSWSDRFRAVQVYGLTG--VSSVVGGLYHSMALAQDGTLRAWGGNAY 678

Query: 406 GSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
           G   F D GV+ +V+   +  L  ++    S +     H + V + G L  +G N   QL
Sbjct: 679 GQ--FGDGGVTPRVVAGAVPGLSGIKLLGASYL-----HVLAVREDGMLLTWGYNRFGQL 731

Query: 464 G 464
           G
Sbjct: 732 G 732



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 123/284 (43%), Gaps = 15/284 (5%)

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD- 253
           C G      P   P            +V AG   + ++T  G V   G N  GQLG G  
Sbjct: 26  CEGTSSPAEPSHPPAARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSV 85

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 313
           +  R   + +  L +V S   IAAG ++ LA+  +  V+++G  +   +G G   D   P
Sbjct: 86  SFQRVVAQQVPGLTDVTS---IAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTP 142

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
           + +         VV V+AG+ H +AL + G V+ WG  + G LG G    +  P P   +
Sbjct: 143 QKVPGLS----DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHS--QPGPSPAQVV 196

Query: 374 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
                V + A    +  +   G+V+ +G  G G LG    G   + L P  +  L+   V
Sbjct: 197 GLTGVVALAAGFDFSLAVRSDGTVWAWGANGSGQLG---DGTYIQRLAPTQVSQLQG--V 251

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           S ++ GLYH + +   G ++ +G N   Q+G  T      P ++
Sbjct: 252 SAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQV 295



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 20/254 (7%)

Query: 117  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G YH+L +  + +V++ G ++ G LG G    + V    +    A   V V+  E H
Sbjct: 1209 IAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLGLDGA---VAVAGGEYH 1265

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
            +  +   G ++  G+NS    G    TNR    P  V  L  V  + V AG   +  L  
Sbjct: 1266 SLMLRFDGTLWATGNNSHGQLGEGTFTNR--LSPFQVVELDQV--RTVRAGGYHSVALRE 1321

Query: 235  RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
             G V T G N  GQLG G    R  P   AP+  + ++  + AG S+  AV      +++
Sbjct: 1322 DGTVWTWGHNGQGQLGDGTVTTRRVP---APVPGLTAIASVGAGTSHTFAVGSE--TWAW 1376

Query: 295  GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYC 353
            G  S+  LG G+  D L+P  +     KG+H V+ V AG +  VA  + G   +WG    
Sbjct: 1377 GRNSHGQLGTGDSSDRLEPTLV-----KGLHGVKSVLAGGDFSVAQGADGSAMSWGTNVH 1431

Query: 354  GALGHGDEIDKTLP 367
            G LG G    +T+P
Sbjct: 1432 GTLGIGLPGQRTVP 1445



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 157/424 (37%), Gaps = 92/424 (21%)

Query: 100  VEHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI 158
            VE   + VETSAG Q        H+L L+ +    S GS   G LG   E+   +    +
Sbjct: 1045 VEGLLNAVETSAGEQ--------HSLALLGDERALSWGSHEYGQLGD-AESGPSLEPVGV 1095

Query: 159  NFPSA---AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVE 212
              PS+      V VSA   HAA +L  G V T G N+    G   T     PI    L  
Sbjct: 1096 KLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPITVAGLGA 1155

Query: 213  ALKGVPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
             +   P  + T        L +R  G V   G NT GQLG G    R  P  +  LE+V 
Sbjct: 1156 MVAVAPAARHT--------LALRSDGTVWAWGDNTFGQLGDGSNTRRTLPVQVVGLEKV- 1206

Query: 271  SVVQIAAG----------------------------------PSYMLAVTG--------- 287
                IAAG                                  P+ ML + G         
Sbjct: 1207 --TAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLGLDGAVAVAGGEY 1264

Query: 288  -------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
                   +G +++ G+ S+  LG G   + L P   Q      +  VR  AG  H VAL 
Sbjct: 1265 HSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSP--FQVVELDQVRTVR--AGGYHSVALR 1320

Query: 341  SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
              G V+TWG    G LG G    + +P P+  L +     V A    TF +      + +
Sbjct: 1321 EDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPGLTA--IASVGAGTSHTFAVGS--ETWAW 1376

Query: 401  GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
            G    G LG  D   SD+ L P ++  L  H V  +  G   +V     G    +G N  
Sbjct: 1377 GRNSHGQLGTGDS--SDR-LEPTLVKGL--HGVKSVLAGGDFSVAQGADGSAMSWGTNVH 1431

Query: 461  AQLG 464
              LG
Sbjct: 1432 GTLG 1435



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 145/352 (41%), Gaps = 21/352 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G YH++ L  + ++ + G +  G  G G  T + V+      P  + +  + AS  H
Sbjct: 654 VVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGA---VPGLSGIKLLGASYLH 710

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V + G + T G N     G          P  V  L     ++++AG   +  +   
Sbjct: 711 VLAVREDGMLLTWGYNRFGQLGLGAAGWSSL-PVQVRGLG--QGRRLSAGRAHSLLVRAD 767

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   G NT GQLG G T  R +P     L         +AG  + L +  +G V+S+G
Sbjct: 768 GTVLAWGQNTSGQLGDGSTTHRASPVLARNLP---CARAASAGRQHSLVLACDGTVWSWG 824

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             S   LG G       P  ++        VV V AG +  + L + G V+TWG    G 
Sbjct: 825 GNSQGQLGDGGVTSRAYPAKVEGL----WGVVAVLAGGDSSMVLRADGTVWTWGANGSGQ 880

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G   D+  P  +  L + +A  V        V  D G+V+ +G  G G LG    G 
Sbjct: 881 LGDGTLGDRASPLEVKGL-AGIATGVMGEAHALVVSQD-GTVWAWGANGRGQLG---DGT 935

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           +     P  +  L A     +S G  +++ V   G ++ +G N+  QLG  T
Sbjct: 936 TTSSASPVRVAGLSA--AMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGT 985



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 154/365 (42%), Gaps = 27/365 (7%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G Y +L L ++ +V++ G    G LG G    +    + +       VV+++A   H
Sbjct: 554 VAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRA---SPVQVTGLTRVVKLAAGAAH 610

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
              V   G V+  GDN+    G    ++R  FR   V  L GV    V  GL  +  L  
Sbjct: 611 GLAVRDDGTVWAWGDNTEGQMGDGSWSDR--FRAVQVYGLTGV--SSVVGGLYHSMALAQ 666

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM--LAVTGNGVVY 292
            G +   G N +GQ G G    R    ++  L  +  +     G SY+  LAV  +G++ 
Sbjct: 667 DGTLRAWGGNAYGQFGDGGVTPRVVAGAVPGLSGIKLL-----GASYLHVLAVREDGMLL 721

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G      LG G       P  ++   +      R+SAG  H + + + G V  WG+  
Sbjct: 722 TWGYNRFGQLGLGAAGWSSLPVQVRGLGQG----RRLSAGRAHSLLVRADGTVLAWGQNT 777

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G    +  P    +L    A    A ++ + VL   G+V+ +G    G LG  D
Sbjct: 778 SGQLGDGSTTHRASPVLARNLP--CARAASAGRQHSLVLACDGTVWSWGGNSQGQLG--D 833

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            GV+ +   P  ++ L    V  +  G   ++V+   G ++ +G N   QLG  TL    
Sbjct: 834 GGVTSRAY-PAKVEGLWG--VVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRA 890

Query: 473 EPTEI 477
            P E+
Sbjct: 891 SPLEV 895



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 117  ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            +  G YH++ L  + +V++ G +  G LG G  TT+ V       P    +  V A  +H
Sbjct: 1309 VRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVP---APVPGLTAIASVGAGTSH 1365

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              F + S + +  G NS    G  D++  +  P LV+ L GV  K V AG +F+      
Sbjct: 1366 T-FAVGS-ETWAWGRNSHGQLGTGDSSDRL-EPTLVKGLHGV--KSVLAGGDFSVAQGAD 1420

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
            G   + G+N HG LG G    R  P ++
Sbjct: 1421 GSAMSWGTNVHGTLGIGLPGQRTVPGAV 1448


>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 671

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 164/361 (45%), Gaps = 45/361 (12%)

Query: 113 NQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N + +  G  H+L +S + SV+S GS+  G LG         S T  +  +  H      
Sbjct: 39  NVVSLAGGEKHSLAVSGDGSVWSWGSNSAGQLG-------VESLTPASVLAPVHA----- 86

Query: 172 SENHAAFVLQSGQVF-----TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
                   L SG  F     T GD +   C     +     P L      VP   + AG 
Sbjct: 87  --------LYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTAPGLSGCGNAVP--MLAAGT 136

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
            F+  L   G V + G NT+  LG GD +DR TP+ +   E + + V +AAG  + LA+T
Sbjct: 137 QFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKV---EALSNAVALAAGDDHTLALT 193

Query: 287 GNGVVYSFGSGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            +G V+S+G   N  LG G  H+   E  P+ ++       +V  ++A   H  AL   G
Sbjct: 194 RDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAIS----NVTAIAAQTYHTQALTRDG 249

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            V++WG    G LG GD+ D+  P+ + +L + +A+   A    +  +   G V+ +G  
Sbjct: 250 NVWSWGSNDFGQLGMGDQNDRDAPQKVEALSNVVAIN--AGGNHSLAVTRDGQVWAWGEN 307

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G LG  D    D    P+ +++L   +V  I+ G  HT+ +T  G ++ +G N R Q+
Sbjct: 308 SEGQLGLGDLWDRDA---PQKVEALS--NVVAINAGGDHTLALTRDGSVWAWGKNGRGQI 362

Query: 464 G 464
           G
Sbjct: 363 G 363



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 18/239 (7%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L ++ +V+S G +    LG G    +    T     + ++ V ++A ++H   + + G V
Sbjct: 142 LKTDGTVWSWGCNTYATLGLGDRVDR---NTPQKVEALSNAVALAAGDDHTLALTRDGSV 198

Query: 186 FTCGDNSSFCCG----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
           ++ G N +   G    H DT      P+ VEA+  V    + A    T  LT  G+V + 
Sbjct: 199 WSWGWNYNGQLGLGSIHEDTYEST--PKKVEAISNV--TAIAAQTYHTQALTRDGNVWSW 254

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           GSN  GQLG GD  DR  P+ +   E + +VV I AG ++ LAVT +G V+++G  S   
Sbjct: 255 GSNDFGQLGMGDQNDRDAPQKV---EALSNVVAINAGGNHSLAVTRDGQVWAWGENSEGQ 311

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           LG G+  D   P+ ++       +VV ++AG +H +AL   G V+ WGK   G +G G+
Sbjct: 312 LGLGDLWDRDAPQKVEALS----NVVAINAGGDHTLALTRDGSVWAWGKNGRGQIGTGE 366



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 42/341 (12%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           ++++ G +  G LG G    Q +    +     ++VV ++  E H+  V   G V++ G 
Sbjct: 8   ALWTWGGNDDGRLGIGATGDQNLP---VQLSYLSNVVSLAGGEKHSLAVSGDGSVWSWGS 64

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           NS+   G            L  A    P   + +G +F  F    G             G
Sbjct: 65  NSAGQLGVE---------SLTPASVLAPVHALYSGDDFHLFYDTDGD------------G 103

Query: 251 HGDTLDR-P-TPKSIAP-LEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
            GD  D  P  P   AP L   G+ V  +AAG  + L +  +G V+S+G  +   LG G+
Sbjct: 104 TGDICDDCPYDPFKTAPGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGD 163

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG---DEID 363
           + D   P+ ++       + V ++AGD+H +AL   G V++WG  Y G LG G   ++  
Sbjct: 164 RVDRNTPQKVEALS----NAVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTY 219

Query: 364 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
           ++ P+ + ++ +  A+   A+   T  L   G+V+ +G   FG LG  D+   D    P+
Sbjct: 220 ESTPKKVEAISNVTAI--AAQTYHTQALTRDGNVWSWGSNDFGQLGMGDQNDRDA---PQ 274

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            +++L   +V  I+ G  H++ VT  G+++ +G+N   QLG
Sbjct: 275 KVEALS--NVVAINAGGNHSLAVTRDGQVWAWGENSEGQLG 313



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 42/268 (15%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +T  G + T G N  G+LG G T D+  P  ++ L    +VV +A G  + LAV+G+G V
Sbjct: 3   VTQGGALWTWGGNDDGRLGIGATGDQNLPVQLSYLS---NVVSLAGGEKHSLAVSGDGSV 59

Query: 292 YSFGS-------------------------GSNFCL-------GHGEQHDELQPRAIQT- 318
           +S+GS                         G +F L       G G+  D+      +T 
Sbjct: 60  WSWGSNSAGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDICDDCPYDPFKTA 119

Query: 319 --FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
                 G  V  ++AG +  + L + G V++WG      LG GD +D+  P+ + +L + 
Sbjct: 120 PGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKVEALSN- 178

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
            AV + A    T  L   GSV+ +GW   G LG            P+ ++++   +V+ I
Sbjct: 179 -AVALAAGDDHTLALTRDGSVWSWGWNYNGQLGLGSIHEDTYESTPKKVEAIS--NVTAI 235

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +   YHT  +T  G ++ +G N+  QLG
Sbjct: 236 AAQTYHTQALTRDGNVWSWGSNDFGQLG 263


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 113/225 (50%), Gaps = 9/225 (4%)

Query: 242 GSNTHGQLGHGDT---LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           G    GQLG  D       P P+ +    E+   V++A G S+ LA+TG+G VYSFG G+
Sbjct: 5   GCGEFGQLGLKDAAGVFTSPLPRFLRGSREL-LFVRVACGSSHTLALTGSGDVYSFGQGT 63

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LGHG       P  + +    G+ +V+++ GD H  AL   G +++WG+G  G LG 
Sbjct: 64  FGALGHGTTESCSSPVIVDSLW--GLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC 121

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           G   +   P P+++L   L  QV      T  +   G +  F W G G  G    G  D 
Sbjct: 122 GSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQL--FSW-GHGHWGQTGHGTQDN 178

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
           +L P+++ SL   ++ Q S G  H V +T  G ++ +GDNE+ Q+
Sbjct: 179 ILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 4/184 (2%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V+V+   +H   +  SG V++ G  +    GH  T      P +V++L G+   Q+  G 
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGH-GTTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           N +  LT+ G + + G   +GQLG G   +   P  +  L +   + Q+  G  Y +A+ 
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDR-LLTQVVCGADYTMAID 155

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++S+G G     GHG Q + L P+ + +      ++V+ SAG  H VAL S G VY
Sbjct: 156 SDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEND--NIVQASAGARHAVALTSGGGVY 213

Query: 347 TWGK 350
            WG 
Sbjct: 214 AWGD 217



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 8/184 (4%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G  HTL ++ S  V+S G    G LGHG  T  C S   ++      +VQ++  +
Sbjct: 38  VRVACGSSHTLALTGSGDVYSFGQGTFGALGHG-TTESCSSPVIVDSLWGLGIVQIACGD 96

Query: 174 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           NH+  +   GQ+F+ G        CG  + +    +P  V AL      QV  G ++T  
Sbjct: 97  NHSCALTVEGQLFSWGRGKYGQLGCGSVENH---LQPVPVTALSDRLLTQVVCGADYTMA 153

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +   G + + G    GQ GHG   +   PK +  LE   ++VQ +AG  + +A+T  G V
Sbjct: 154 IDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLEN-DNIVQASAGARHAVALTSGGGV 212

Query: 292 YSFG 295
           Y++G
Sbjct: 213 YAWG 216



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 7/174 (4%)

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           PR ++  R   +  VRV+ G  H +AL  SG VY++G+G  GALGHG     + P  + S
Sbjct: 26  PRFLRGSRE--LLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDS 83

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
           L     VQ+      +  L   G ++ +G   +G LG    G  +  L+P  + +L    
Sbjct: 84  LWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGC---GSVENHLQPVPVTALSDRL 140

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 486
           ++Q+  G  +T+ +   G+LF +G     Q GH T    L P    +  +E D 
Sbjct: 141 LTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPK--LVCSLENDN 192



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 6/136 (4%)

Query: 345 VYTWGKGYCGALGHGDE---IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           + +WG G  G LG  D        LP  L   +  L V+V      T  L  +G VY FG
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFG 60

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
              FG+LG    G ++    P I+DSL    + QI+ G  H+  +T  G+LF +G  +  
Sbjct: 61  QGTFGALG---HGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYG 117

Query: 462 QLGHDTLRGCLEPTEI 477
           QLG  ++   L+P  +
Sbjct: 118 QLGCGSVENHLQPVPV 133


>gi|351711665|gb|EHB14584.1| Putative E3 ubiquitin-protein ligase HERC3 [Heterocephalus glaber]
          Length = 1051

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 137/289 (47%), Gaps = 41/289 (14%)

Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            C G+    +P         +  P++   +     K+V  G N + FL   G V+TCG N
Sbjct: 2   LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T GQLGH    ++P        E++G+     ++ +A G S+ LA++  G ++S+G+GS+
Sbjct: 62  TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 113

Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
             LG     D +  PR IQ   ++ I  ++VS G+ H +AL + G  +TWGK   G LG 
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171

Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD----- 412
           G E   +  P+ + SL+     QV A    +F L  +G+V+G+G    G LG  D     
Sbjct: 172 GKEFSSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKGIK 231

Query: 413 RGVSDKVLRPRILDS----------LRAHHVSQISTGLYHTVVVTDRGR 451
           +G  DK    R L S          LR   V  IS G  HT V+T   R
Sbjct: 232 QGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDEHTAVLTKEHR 280



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 113/216 (52%), Gaps = 17/216 (7%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
           F S   V +V+   NH+ F+L+ G+V+TCG N+    GH R+ N    +P  + AL    
Sbjct: 30  FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN----KPEQIGALADQH 85

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
              V  G + +  L+ +G + + G+ + GQLG   T D    P+ I  L +  +++Q++ 
Sbjct: 86  IIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + LA+  +G  +++G  S+  LG G++   +  P+ +++   +GI + +V+AG  H 
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFSSQASPQRVRSL--EGIPLAQVAAGGAHS 202

Query: 337 VALDSSGYVYTWGKGYCGALGHGDE-------IDKT 365
            AL  SG V+ WG    G LG  DE       +DKT
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKGIKQGALDKT 238



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 21/237 (8%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L+ +  V++CG +  G LGH  E  +     +I   +  H++ V+  E+H+  +
Sbjct: 43  GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              GQ+F+ G  S    G   T   +  PRL++ L      QV+ G      L   G   
Sbjct: 100 SDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159

Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           T G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A++ +G V+ +G  +
Sbjct: 160 TWGKNSHGQLGLGKEFSSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIH----------------VVRVSAGDEHVVAL 339
              LG  ++    Q    +T   +G++                VV +S GDEH   L
Sbjct: 219 AGQLGLSDEKGIKQGALDKTENIRGLYSNRESPCHVKLLRTQKVVYISCGDEHTAVL 275



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 7/201 (3%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           SV ++A G ++ + +  +G VY+ G  +   LGH  + +  +P  I     +  H++ V+
Sbjct: 35  SVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQ--HIIHVA 90

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTF 389
            G+ H +AL   G +++WG G  G LG     D   +P  +  L     +QV        
Sbjct: 91  CGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL 150

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            L   G  + +G    G LG      S     P+ + SL    ++Q++ G  H+  ++  
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFSSQA--SPQRVRSLEGIPLAQVAAGGAHSFALSLS 208

Query: 450 GRLFGFGDNERAQLGHDTLRG 470
           G +FG+G N   QLG    +G
Sbjct: 209 GAVFGWGMNNAGQLGLSDEKG 229


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 145/314 (46%), Gaps = 23/314 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  +S    HAA + + G++F+ G       GH+  N  +  P+LV++L G+  K V  G
Sbjct: 322 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHK-INMDLDHPKLVDSLNGIAAKSVACG 380

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQL--GHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  LT  G V+T G +  G       ++  R  P+ ++ PL+ + S+  +A G  + 
Sbjct: 381 EYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGI-SISNVACGEWHT 439

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
             V+  G ++++G G+   LGHG      QP+ +++    G+ V  V+ G  H  A+   
Sbjct: 440 AVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLN--GLCVKSVACGSWHTAAIVDI 497

Query: 340 --------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                    + G ++TWG G  G LGHGD   K LP  ++ L      QV   +  T  L
Sbjct: 498 MIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGL 557

Query: 392 VDTGSVYGFGWMGFGSLG-FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
            + G VY  G    G LG    R  S  ++  +    L+   V  IS+G YH   +T  G
Sbjct: 558 TNMGRVYTMGSSIHGQLGNLSSRDASVAIVEGK----LKEEFVKAISSGSYHVASLTSTG 613

Query: 451 RLFGFGDNERAQLG 464
           R++ +G     QLG
Sbjct: 614 RVYTWGKGAHGQLG 627



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 105/219 (47%), Gaps = 15/219 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  V+  E H A V   G++FT GD +    GH +    + +P+ VE+L G+  K V  G
Sbjct: 429 ISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNL-ISLSQPKEVESLNGLCVKSVACG 487

Query: 226 LNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
              T            F +  G + T G    G+LGHGD   +  P  +APL +     Q
Sbjct: 488 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDC-DFAQ 546

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++ G    + +T  G VY+ GS  +  LG+    D     AI   + K   V  +S+G  
Sbjct: 547 VSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSRD--ASVAIVEGKLKEEFVKAISSGSY 604

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
           HV +L S+G VYTWGKG  G LG GD  D+ LP  + +L
Sbjct: 605 HVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEAL 643



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 148/358 (41%), Gaps = 32/358 (8%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAF 178
           G++  L+  +  +FS G   CG LGH  +    +   + ++  +      V+  E     
Sbjct: 329 GKHAALITKHGEIFSWGQGKCGRLGH--KINMDLDHPKLVDSLNGIAAKSVACGEYQTCA 386

Query: 179 VLQSGQVFTCGDN---SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           + ++G+V+T GD+   + F C     +R + + +L   LKG+    V  G   T  ++  
Sbjct: 387 LTKAGEVYTWGDSRFGADFDCEENSRSRWLPQ-KLSGPLKGISISNVACGEWHTAVVSAC 445

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV---------- 285
           G + T G  T G LGHG+ +    PK +  L  +  V  +A G  +  A+          
Sbjct: 446 GRLFTYGDGTFGALGHGNLISLSQPKEVESLNGL-CVKSVACGSWHTAAIVDIMIDRFKF 504

Query: 286 -TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +  G ++++G G    LGHG+   +L P  +           +VS G    V L + G 
Sbjct: 505 KSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLV--DCDFAQVSCGRMLTVGLTNMGR 562

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VYT G    G LG+    D ++      LK      + +       L  TG VY +G   
Sbjct: 563 VYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGA 622

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG--------LYHTVVVTDRGRLFG 454
            G LG  D   SD    P  +++L    V  I+ G        L+ ++  +D+   +G
Sbjct: 623 HGQLGLGD---SDDRNLPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYG 677



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 124/276 (44%), Gaps = 20/276 (7%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+L+E+   +  + ++ G      +T  G + + G    G+LGH   +D   PK +  L 
Sbjct: 311 PKLLESTMMLDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN 370

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGS---GSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            + +   +A G     A+T  G VY++G    G++F      +   L  +       KGI
Sbjct: 371 GIAAK-SVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL--KGI 427

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
            +  V+ G+ H   + + G ++T+G G  GALGHG+ I  + P+ + SL       V   
Sbjct: 428 SISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACG 487

Query: 385 KRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
              T  +VD            G ++ +G    G LG    G +++ L P  +  L     
Sbjct: 488 SWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLG---HGDNERKLLPTCVAPLVDCDF 544

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
           +Q+S G   TV +T+ GR++  G +   QLG+ + R
Sbjct: 545 AQVSCGRMLTVGLTNMGRVYTMGSSIHGQLGNLSSR 580



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 2/169 (1%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L P+ +++     + V  +S G +H   +   G +++WG+G CG LGH   +D   P+
Sbjct: 307 DALLPKLLESTMM--LDVQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPK 364

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            + SL    A  V   + +T  L   G VY +G   FG+    +     + L  ++   L
Sbjct: 365 LVDSLNGIAAKSVACGEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPL 424

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   +S ++ G +HT VV+  GRLF +GD     LGH  L    +P E+
Sbjct: 425 KGISISNVACGEWHTAVVSACGRLFTYGDGTFGALGHGNLISLSQPKEV 473



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 19/218 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   +T +G ++S+G G    LGH    D   P+ + +    GI    V+ 
Sbjct: 322 VQSISLGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLN--GIAAKSVAC 379

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT--LPEPLS-SLKSHLAVQVCARKRKT 388
           G+    AL  +G VYTWG    GA    +E  ++  LP+ LS  LK      V   +  T
Sbjct: 380 GEYQTCALTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHT 439

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
            V+   G ++ +G   FG+LG    G    + +P+ ++SL    V  ++ G +HT  + D
Sbjct: 440 AVVSACGRLFTYGDGTFGALG---HGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVD 496

Query: 449 -----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
                       G+LF +GD ++ +LGH      L PT
Sbjct: 497 IMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPT 534


>gi|327259202|ref|XP_003214427.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Anolis
           carolinensis]
          Length = 965

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +KG    +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 352 PQKLDVIKGGCSARQVCAGNTHFALVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 411

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 319
            +  L+   ++ Q++ G  + + +T  G  ++FGS    C+G  +    + L+PR +  F
Sbjct: 412 HVEKLQG-KAIHQVSCGDDFTVCITDEGQAFAFGSDYYGCIGVNKAFGSEVLEPRQLNVF 470

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HV  L  +  VYTWG G  G LG   E D  LP+ +   K+   V
Sbjct: 471 LNNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHWLPQKVEIQKASNIV 528

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 429
            V      TF+L  TG V   G   F  LG      G+ +      I           L 
Sbjct: 529 SVQCGSDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYTTCFTLAKKLS 588

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 589 FYKIRTIAPGKTHTAAIDERGRLLTFGSNKCGQLG 623



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 6/166 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 359 KGGCSARQVCAGNTHFALVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 418

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G  + FG   +G +G  ++    +VL PR L+    + V Q
Sbjct: 419 KAIHQVSCGDDFTVCITDEGQAFAFGSDYYGCIGV-NKAFGSEVLEPRQLNVFLNNPVEQ 477

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ IQ+
Sbjct: 478 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHWLPQKVEIQK 523



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 125/305 (40%), Gaps = 36/305 (11%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 173
           Q++ G   T+ I++    F+ GS   G +G +    ++ +   ++N      V QVS  +
Sbjct: 423 QVSCGDDFTVCITDEGQAFAFGSDYYGCIGVNKAFGSEVLEPRQLNVFLNNPVEQVSCGD 482

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           NH A + ++ +V+T G      CG       D+    + P+ VE  K      V  G + 
Sbjct: 483 NHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHWLPQKVEIQKASNIVSVQCGSDG 536

Query: 229 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRP--TPKSIAPLEEVGSVVQIA 276
           T  LT  G V  CG N   +LG          H    + P  T  ++A       +  IA
Sbjct: 537 TFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYTTCFTLAKKLSFYKIRTIA 596

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G ++  A+   G + +FGS     LG G     L    +      G  V+RVS GDE  
Sbjct: 597 PGKTHTAAIDERGRLLTFGSNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFT 655

Query: 337 VALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPL-SSLKSHLAVQVCARKRKT 388
           +A     +++ WG G  G L        H  +I  + P P+  SL  H    +  R   T
Sbjct: 656 IAATDDNHIFAWGNGGNGRLAMTPTERAHSSDICTSWPRPIFGSL--HYVPDLSCRGWHT 713

Query: 389 FVLVD 393
            ++V+
Sbjct: 714 IIIVE 718


>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Hydra magnipapillata]
          Length = 364

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 9/244 (3%)

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVYS 293
            G V+  G N +G LG GD      PK I  L +   +VQ+A G   ++LAVT +G +YS
Sbjct: 40  NGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQ-KDIVQLAYGMGPHVLAVTDSGELYS 98

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G G    LGH     E + + +  + +K   V++V+ G  H +AL   G VY WG   C
Sbjct: 99  WGHGGYGQLGH---TSEEKSKPVLVYMQK--KVIQVACGSYHSIALTEDGEVYAWGSNNC 153

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G   ++  P+ +S + S   V V   +  T +L   G +Y +G+ G G LG  + 
Sbjct: 154 GQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGIENN 213

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
             ++++   R+  SL    + +I  G+ H +V+TD G L+ +G N   QLG  T      
Sbjct: 214 --TNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLGTTHNTSV 271

Query: 474 PTEI 477
           PT I
Sbjct: 272 PTLI 275



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN-HAAF 178
           G    L ++N  V++ G +  G LG G + +  +    I       +VQ++     H   
Sbjct: 31  GNEALLTLTNGDVYALGFNGNGCLGVG-DGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLA 89

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           V  SG++++ G       GH    +   +P LV   K V   QV  G   +  LT  G V
Sbjct: 90  VTDSGELYSWGHGGYGQLGHTSEEKS--KPVLVYMQKKVI--QVACGSYHSIALTEDGEV 145

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           +  GSN  GQLG G + ++ TPK ++ L     +V ++ G S+ + +T +G +YS+G   
Sbjct: 146 YAWGSNNCGQLGLGISNNQATPKRVS-LIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNG 204

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
           N  LG     ++LQP  + T    G  + ++  G  HV+ L   G +Y+WG    G LG 
Sbjct: 205 NGQLGIENNTNQLQPVRV-TGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGL 263

Query: 359 GDEIDKTLPEPLSS 372
           G   + ++P  +++
Sbjct: 264 GTTHNTSVPTLINT 277



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)

Query: 99  SVEHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR 157
           S E S  ++       +Q+  G YH++ L  +  V++ GS+ CG LG G    Q     R
Sbjct: 111 SEEKSKPVLVYMQKKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATP-KR 169

Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
           ++   +  +V VS  ++    +   G++++ G N +   G  +    +   R+  +L G 
Sbjct: 170 VSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGK 229

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
             +++  G+     LT  G +++ G+N++GQLG G T +   P  I
Sbjct: 230 FIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLGTTHNTSVPTLI 275


>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 447

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 158/370 (42%), Gaps = 43/370 (11%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L+ + SV+  G    GV    P+        R++    + V Q++A   H   +   G V
Sbjct: 43  LLEDGSVWQWGRVCDGVEWSAPQ--------RVDI---SGVRQIAAGSGHVLALKGDGTV 91

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           +  G NS    G   TN     P  V  L GV  K ++AG  F+  L   G V   GSNT
Sbjct: 92  WAWGSNSYGELGD-GTNENSIEPVQVAGLTGV--KAISAGKGFSLALKGDGSVWAWGSNT 148

Query: 246 HGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
           +GQLG      +   TP  +  LE    VV I+ G S+  A+  NGV++++G  S+  LG
Sbjct: 149 YGQLGKNPLSFMGSLTPIQVEGLE---GVVSISCGGSHCFALQENGVLWAWGENSHGILG 205

Query: 304 HGEQHDELQPRAIQTFRRKGIHVVRVSAGD-EHVVALDSSGYVYTWGKGYCGALGHGD-- 360
            G    + +P      + K   V    AG+  H +A+   G V+ WG  Y G LG G   
Sbjct: 206 DGTNESQFKP-----VKPKIKDVKAFDAGELSHALAVKEDGSVWAWGFNYKGQLGTGGVS 260

Query: 361 -----------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
                      E D   P+ +  +    A  V A    +  L   GSV+ +G    G LG
Sbjct: 261 LSDQGRISLGREADNYNPDIVRGVSDAKA--VAAGGSHSVALASDGSVWAWGSNSDGQLG 318

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
               G SD V  P  +  +    V+ I+ G+YHT+ +   G ++ +G N   QLG+ +  
Sbjct: 319 LGHAGGSD-VTSPTRVQGIEG--VTAIAAGMYHTLALKGDGSVWAWGSNSDGQLGNASFS 375

Query: 470 GCLEPTEIFI 479
               P  I I
Sbjct: 376 AASSPVPILI 385


>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
          Length = 322

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           FC G    +R + R R   +  G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG--ADSRELQRRRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
                 P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I T     I +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKIMTL--NDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 19/284 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            FG    G LG+   P++     V R   +D L    VSQI  G
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCG 295



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 126/282 (44%), Gaps = 19/282 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           V+T+G    G LG+    +K  P+ +  +   ++   C R R
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGRLR 298


>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
          Length = 2141

 Score =  114 bits (285), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 76/277 (27%), Positives = 139/277 (50%), Gaps = 9/277 (3%)

Query: 206 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           F+P +V+    +   +V+ G +FT  L+  GHV++ G    G LG G+     TP +I  
Sbjct: 241 FKPSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTP-NIIK 299

Query: 266 LEEVGSVVQ----IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
            ++ G + Q    IA G +++L++   G+VYS+G+G    LGHG++  E  P+ I   R+
Sbjct: 300 YQKNGHLFQNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQ 359

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
             I  + + AG+    A+     ++ WG G  G LG G   +   P  L  LK      +
Sbjct: 360 YKI--LMIEAGEGSSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDI 417

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
                 +  ++  G    +G    G LG  +  +     +P+ L +L    + QI+ G +
Sbjct: 418 ALGSNHSLCILRNGKAMCWGSSKDGKLGL-ETALDRNFTQPKELVTLDKEKLYQIAAGPF 476

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE-PTEI 477
           H++ +T+ G ++ FG+++  +LG+D ++G ++ P +I
Sbjct: 477 HSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKI 513



 Score =  107 bits (268), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 66/233 (28%), Positives = 124/233 (53%), Gaps = 11/233 (4%)

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           P   SI   +    +++++ G S+ LA++  G VYS+G G++  LG GEQ+  + P  I+
Sbjct: 240 PFKPSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIK 299

Query: 318 TFRRKGIHVVR----VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
            +++ G H+ +    ++ G  HV++LD  G VY+WG G  G LGHGDE  + +P+ +  L
Sbjct: 300 -YQKNG-HLFQNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGL 357

Query: 374 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
           + +  + + A +  +  +     ++ +G    G LG    G +  VL+P +L+ L+   V
Sbjct: 358 RQYKILMIEAGEGSSAAISIKNELFIWGVGLHGRLG---TGKTANVLKPVMLEDLKDQKV 414

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL--RGCLEPTEIFIQEMEE 484
             I+ G  H++ +   G+   +G ++  +LG +T   R   +P E+   + E+
Sbjct: 415 EDIALGSNHSLCILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEK 467



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 78/302 (25%), Positives = 123/302 (40%), Gaps = 45/302 (14%)

Query: 98  QSVEHSSDIVETSAGNQM-----QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQ 151
           Q+V  + +I++      +      I  G  H L + +   V+S G+   G LGHG ET +
Sbjct: 289 QNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGE 348

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
            +    I       ++ + A E  +A +    ++F  G       G   T   + +P ++
Sbjct: 349 NIPKEIIGL-RQYKILMIEAGEGSSAAISIKNELFIWGVGLHGRLGTGKTAN-VLKPVML 406

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEV 269
           E LK    + +  G N +  +   G     GS+  G+LG    LDR    PK +  L++ 
Sbjct: 407 EDLKDQKVEDIALGSNHSLCILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDK- 465

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQT---FRRK--- 322
             + QIAAGP + +A+T NG +YSFG+  +  LG+ E    +Q PR I     F RK   
Sbjct: 466 EKLYQIAAGPFHSIALTENGEIYSFGNSKDGKLGYDEIKGNVQIPRKITNCPIFARKTGL 525

Query: 323 ---------------------------GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                                      G  V++   G    V L + G +Y  G    G 
Sbjct: 526 NDRRDKYQLFNQFDDQMTVISNNQQLGGCEVIQAQCGFNSTVFLLNDGQMYVCGSNKYGQ 585

Query: 356 LG 357
           LG
Sbjct: 586 LG 587



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 85/357 (23%), Positives = 151/357 (42%), Gaps = 48/357 (13%)

Query: 94   LRFLQSVEHSSDIVETSAGNQMQI---TTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET 149
            L+ LQ VE  S +       QM+I   +TG +H L +++  + F  G +  G LG G + 
Sbjct: 654  LQQLQDVEKPSPLTIYHDAVQMKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKD 713

Query: 150  TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN---------SSFCCGHRD 200
            T     TRI       ++  ++ E+H+ F+   G+V   G N         +S   G   
Sbjct: 714  TVVSKPTRIKSLQDKVIIMTASGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADK 773

Query: 201  TNRPI------FRPRLVEA-LKGVPCKQVTAGLNFTGF--------LTIRGH-------- 237
               P       ++ +L+E  ++  P  ++  GL   GF        + IR +        
Sbjct: 774  KENPDEIYDENYQRQLIETKIELTP--KIIKGLESIGFIAAGKNHSIAIRTYKRKEKAMK 831

Query: 238  VHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            + T G   HGQ GHG   +   P+ +  P+ +    +Q + G  + +A+   G ++ FG 
Sbjct: 832  LFTWGCGWHGQTGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFGY 891

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
              +  +       +  P  ++T  +       +S+G+EH +A+  SG VY +GK      
Sbjct: 892  KPSVGIEDFNDEKQFMPARLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNT---- 947

Query: 357  GHGDEIDKTLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSV-YGFGWMGFGSLGF 410
                +I+ +  E L    +++     + A      VL+DT  V Y +G++G G  G 
Sbjct: 948  --NTKINSSHKEYLYFDQVENEEKAVLTACGANHSVLIDTKGVPYTWGFVGNGRCGL 1002



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 70/282 (24%), Positives = 116/282 (41%), Gaps = 46/282 (16%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAA 277
           K V+ G      +T  G     G N +GQLG G  DT+    P  I  L++   ++  A+
Sbjct: 678 KHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTV-VSKPTRIKSLQD-KVIIMTAS 735

Query: 278 GPSYMLAVTGNGVVY--------SFGSGSNFCLGHGEQHD-------------------E 310
           G S+ L ++  G V           G G N   G  ++ +                   E
Sbjct: 736 GESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETKIE 795

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVAL------DSSGYVYTWGKGYCGALGHGDEIDK 364
           L P+ I+     G     ++AG  H +A+      + +  ++TWG G+ G  GHG   + 
Sbjct: 796 LTPKIIKGLESIGF----IAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTGHGSWQND 851

Query: 365 TLPE--PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            LP+   +  LK    +Q     + T  L  TG ++ FG+    S+G  D     + +  
Sbjct: 852 YLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFGYKP--SVGIEDFNDEKQFMPA 909

Query: 423 RILDSLRAHHVSQ-ISTGLYHTVVVTDRGRLFGFGDNERAQL 463
           R+    +     + IS+G  H + VT  G ++GFG N   ++
Sbjct: 910 RLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNTNTKI 951


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 161/370 (43%), Gaps = 34/370 (9%)

Query: 126 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           +++ +S+ + GS   G LG G  E  +         P +   V VS S N  A +   G 
Sbjct: 1   MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSV-VSGSRNSLA-ICDDGT 58

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +FT G N     GH+   +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  MFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 245 THGQLGH---GDTLDRPT------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            +GQ G     D + RP       PK  AP     +V Q+AAG ++ + +T  G V+++G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL---TVRQVAAGGTHSVVLTREGHVWTWG 175

Query: 296 SGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGK 350
                            P  I+      R +G+  VR ++ G  H +AL+  G +  WG 
Sbjct: 176 Q-------------PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGN 222

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG GD    + P P+  L     V + A    +  L D G VYG+G    G LG 
Sbjct: 223 NEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGL 282

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
            D   S K++ P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+     
Sbjct: 283 GDNDKSSKMV-PQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVT 341

Query: 471 CLEPTEIFIQ 480
             +P E+ I+
Sbjct: 342 TGQPLELPIK 351



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 131/303 (43%), Gaps = 18/303 (5%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           + +G  ++L I  + ++F+ G +  G LGH PET      +R+   +   + Q +    H
Sbjct: 43  VVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWH 102

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLV--EALKGVPCKQVTAGLNFT 229
              V   G+ +  G N    CG      +  RP+ R  ++       +  +QV AG   +
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHS 162

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT  GHV T G         GD      P  +  LE   +V  IA G  + LA+  +G
Sbjct: 163 VVLTREGHVWTWGQ----PWPPGDIKQISVPVRVQGLE---NVRLIAVGAFHNLALEEDG 215

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            + ++G+     LG G+      P  +Q      + +V ++AG  H  AL   G VY WG
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVQGL--DDLTLVDIAAGGWHSTALTDKGEVYGWG 273

Query: 350 KGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           +G  G LG G  D+  K +P+ ++ L     +QV      +  L   G ++ FG    G 
Sbjct: 274 RGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333

Query: 408 LGF 410
           LG+
Sbjct: 334 LGY 336


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 120/242 (49%), Gaps = 6/242 (2%)

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           RP+LVE L G+    +  G   +  +T  GHV T G   +G+LGHGD+ D+  PK +  L
Sbjct: 9   RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEAL 68

Query: 267 EEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
               ++ +   +G +  L +T +  V+S+G G    LG G       P  I++    G+ 
Sbjct: 69  LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLG 126

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           VV+V  G +  VAL  SG VYTWGKG    LGHG       P+ +++L+    + +    
Sbjct: 127 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGS 186

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
                  D+G VY +G    G LG    G    +  PR++ +L+  H+ +++ G  HT+ 
Sbjct: 187 LHCVACSDSGEVYTWGDNDEGQLG---DGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLA 243

Query: 446 VT 447
           ++
Sbjct: 244 LS 245



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 109/224 (48%), Gaps = 4/224 (1%)

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 310
           HG+ +    PK +  L  + SV  IA G ++  A+T +G V ++G G    LGHG+  D+
Sbjct: 1   HGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 59

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
           L+P+ ++         +   +GD   + +     V++WG G  G LG G      LP  +
Sbjct: 60  LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 119

Query: 371 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
            SL     V+V    + +  L  +G+VY +G   F  LG    G  D V RP+ + +L+ 
Sbjct: 120 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAALQG 176

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             +  I+TG  H V  +D G ++ +GDN+  QLG  T+     P
Sbjct: 177 KKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWP 220



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 104/228 (45%), Gaps = 6/228 (2%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++    H+A +  SG V T G       GH D+   + RP+LVEAL G     +  G
Sbjct: 21  VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACG 79

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
                 L I    +V + G   +G+LG G +     P  I  L  +G VV++  G  + +
Sbjct: 80  SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSV 138

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           A+T +G VY++G G    LGHG      +P+ +     +G  ++ ++ G  H VA   SG
Sbjct: 139 ALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSG 196

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
            VYTWG    G LG G       P  +++L+    V+V      T  L
Sbjct: 197 EVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLAL 244



 Score = 42.0 bits (97), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
           HG+ +    P+ +  L       +      +  +  +G V  +G   +G LG  D   S+
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---SE 57

Query: 418 KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             LRP+++++L  +    I+  +G   T+ +TD   ++ +GD +  +LG     GC  P 
Sbjct: 58  DQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPY 117

Query: 476 EI 477
           +I
Sbjct: 118 KI 119


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 129/276 (46%), Gaps = 12/276 (4%)

Query: 194 FCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
           FC G   R+  R     R      G    Q  +G   +  L     V +CG N+ GQLG 
Sbjct: 3   FCWGADSRELQR-----RRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGR 57

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDE 310
                   P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +   
Sbjct: 58  RGAQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS 116

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEP 369
             P+ I T    GI +++VS G  H +AL     V++WGK   G LG G E   +  P+ 
Sbjct: 117 FTPKKITTLN--GIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQR 174

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           + SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+
Sbjct: 175 VRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALK 234

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 235 NLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGY 270



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 149/302 (49%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L  +  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGTHSFALSL 198

Query: 342 SGYVYTWGKGYCGALG-HGDEIDKTLPEPLS--SLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G  +     +PLS  +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNCSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 131/299 (43%), Gaps = 23/299 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L G+   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGTHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +  G  + +GS S   L   G        +P +I   +  G  VV +S GDEH   L   
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLG--VVYISCGDEHTAVLTQD 254

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 255 GKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 185/439 (42%), Gaps = 34/439 (7%)

Query: 45   SHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN--GNWKRVLRFLQ-SVE 101
            S+ L P + + L+D+ A      H   AG    +    LN     G      R L   V+
Sbjct: 913  SYRLLPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQ 972

Query: 102  HSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP 161
                +   +AG       G+  TL       ++ G +  G LG GP  +Q ++  ++   
Sbjct: 973  GLMSVTAMAAGGYHMAAAGQDGTL-------WTWGLNSYGQLGGGP-LSQSLTPVQVQVQ 1024

Query: 162  SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
                V  ++A  +H   V Q G V++ G N+    G   T + +  P  V+ L GV    
Sbjct: 1025 GLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSL-TPVQVQGLTGVTA-- 1081

Query: 222  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
            ++AG   T  L   G V   G N+ GQLG G T  R TP  +  L     V+ IAAG  +
Sbjct: 1082 ISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLT---GVIAIAAGSLH 1138

Query: 282  MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
             +A+  +G V+++G  S   LG G       P  +Q        V+ ++AG  H VAL  
Sbjct: 1139 TVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL----TGVIAIAAGSLHTVALRQ 1194

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G V+ WG    G LG G    +  P  +  L       + A    T  +   G+ + +G
Sbjct: 1195 DGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLTG--VTTIAAGYFHTAAVRQDGTAWTWG 1252

Query: 402  WMGFGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +  +G LG   F DR        P  +  L    VS ++ G  HTVVV + G ++ +G+N
Sbjct: 1253 FNLWGQLGDGTFTDRAT------PVQVQGLTG--VSALAAGYAHTVVVGEDGTVWAWGNN 1304

Query: 459  ERAQLGHDTLRGCLEPTEI 477
               QLG+ +      P ++
Sbjct: 1305 SGTQLGNGSSTDRSTPVQV 1323



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 154/356 (43%), Gaps = 21/356 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HT+ L  + ++++ G++  G LG G   T  V FT +       V  ++A   +     Q
Sbjct: 332 HTVALRQDGTLWAWGNNSSGQLGDG---TTTVRFTPVQVQGLTGVTAIAAGYLYTVASKQ 388

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
            G V+  GDN     G   T R +  P  V+ L GV    + AG  +T      G V   
Sbjct: 389 DGTVWAWGDNEWGQLGDGTTTRRL-TPVQVQGLTGVTA--IAAGYLYTVASKQDGTVWAW 445

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           G N   QLG G    R TP  +  LE    +  IAA     +AV  +G V+++G  +   
Sbjct: 446 GDNKRSQLGEGAVSQRHTPGEVQGLE---GITAIAASNLLTVAVRQDGTVWAWGDNARGQ 502

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LG G     L P  +Q        V  V+A D H+VA+   G V+ WG G+ G LG G  
Sbjct: 503 LGDGTTTRRLTPVQVQGL----AGVTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTG 558

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
           +D++ P  +  L    A  + A    T  L   G+V+ +G+  +G LG    G +   L 
Sbjct: 559 MDRSTPVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAWGFNNYGQLG---DGTTAGHLT 613

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           P  +  +       I+ G  HTV +   G ++ +G N   QLG  T      P ++
Sbjct: 614 PVQVPGVTG--AVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQV 667



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 159/356 (44%), Gaps = 23/356 (6%)

Query: 123 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL +  + +V++ G++  G LG G  T +   F+ +   + A    ++A   H     Q
Sbjct: 84  HTLAVRQDGTVWAWGNNDDGQLGDGTTTRR---FSPVQVMTGA--TAIAAGIYHTVAASQ 138

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
            G V+T G NSS   G   T+   F P  V+ L GV    V AG N +  L   G V T 
Sbjct: 139 DGTVWTWGRNSSGQLGD-GTSIQRFSPVQVQGLTGVTA--VAAGRNHSAALGQGGTVWTW 195

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           G N  GQLG G +  R TP  +  L     V+ I+A  S  +A+  +G V+++G+ S+  
Sbjct: 196 GDNLVGQLGDGTSTQRLTPVQVQGLT---GVIAISANDSETVALRQDGTVWAWGNNSSGQ 252

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LG G       P  +Q     G  V  ++AG    VAL   G ++ WG    G LG+G  
Sbjct: 253 LGDGTTTVRFTP--VQVLGLTG--VTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTT 308

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
                PE +  L    A  + A    T  L   G+++ +G    G LG    G +     
Sbjct: 309 FGSYRPEQVQGLTGVTA--IAASGIHTVALRQDGTLWAWGNNSSGQLG---DGTTTVRFT 363

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           P  +  L    V+ I+ G  +TV     G ++ +GDNE  QLG  T    L P ++
Sbjct: 364 PVQVQGLTG--VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQV 417



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 158/371 (42%), Gaps = 31/371 (8%)

Query: 117  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            I  G  HTL +  + +V+S G +  G LG G   T   S T +       V  +SA + H
Sbjct: 1032 IAAGFSHTLAVRQDGTVWSWGGNAYGQLGDG---TTAQSLTPVQVQGLTGVTAISAGDAH 1088

Query: 176  AAFVLQSGQVFTCGDNSSFCCG-----HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               + + G V+  G NS    G     HR T      P  V+ L GV    + AG   T 
Sbjct: 1089 TVALRRDGTVWAWGRNSWGQLGDGTTTHRAT------PVQVQGLTGVIA--IAAGSLHTV 1140

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             L   G V   G N+ GQLG G T  R TP  +  L     V+ IAAG  + +A+  +G 
Sbjct: 1141 ALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLT---GVIAIAAGSLHTVALRQDGT 1197

Query: 291  VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            V+++G      LG G     L P  +Q        V  ++AG  H  A+   G  +TWG 
Sbjct: 1198 VWAWGFNDLGQLGDGTTTRRLTPAQVQGL----TGVTTIAAGYFHTAAVRQDGTAWTWGF 1253

Query: 351  GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
               G LG G   D+  P  +  L    A+   A    T V+ + G+V+ +G      LG 
Sbjct: 1254 NLWGQLGDGTFTDRATPVQVQGLTGVSAL--AAGYAHTVVVGEDGTVWAWGNNSGTQLG- 1310

Query: 411  PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
               G S     P  +++L       ++ G +HTV ++  G  +G+G N   Q+G  T   
Sbjct: 1311 --NGSSTDRSTPVQVEALTGAF--SLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTAD 1366

Query: 471  CLEPTEIFIQE 481
               P  + +QE
Sbjct: 1367 RPTPVNVMVQE 1377



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 158/366 (43%), Gaps = 27/366 (7%)

Query: 117  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            +  G YH      + ++++ G +  G LG GP + + +    +       V  ++A   H
Sbjct: 880  MAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLP---VQVQGLMDVTAMAAGGYH 936

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
             A   Q G ++T G NS    G    +  +  P  V+ L  V    + AG          
Sbjct: 937  MAAAGQDGTLWTWGLNSYGQLGGGPLSYRLL-PVQVQGLMSVTA--MAAGGYHMAAAGQD 993

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE----EVGSVVQIAAGPSYMLAVTGNGVV 291
            G + T G N++GQLG G     P  +S+ P++     +  V  IAAG S+ LAV  +G V
Sbjct: 994  GTLWTWGLNSYGQLGGG-----PLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTV 1048

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            +S+G  +   LG G     L P  +Q        V  +SAGD H VAL   G V+ WG+ 
Sbjct: 1049 WSWGGNAYGQLGDGTTAQSLTPVQVQGL----TGVTAISAGDAHTVALRRDGTVWAWGRN 1104

Query: 352  YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
              G LG G    +  P  +  L   +A  + A    T  L   G+V+ +G   +G LG  
Sbjct: 1105 SWGQLGDGTTTHRATPVQVQGLTGVIA--IAAGSLHTVALRQDGTVWAWGRNSWGQLG-- 1160

Query: 412  DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
              G +     P  +  L    V  I+ G  HTV +   G ++ +G N+  QLG  T    
Sbjct: 1161 -DGTTTHRATPVQVQGLTG--VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRR 1217

Query: 472  LEPTEI 477
            L P ++
Sbjct: 1218 LTPAQV 1223



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 134/318 (42%), Gaps = 19/318 (5%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
           F + A  V  + + NH   V Q G V+  G+N     G   T R  F P  V+ + G   
Sbjct: 69  FAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRR-FSP--VQVMTGATA 125

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
             + AG+  T   +  G V T G N+ GQLG G ++ R +P  +  L     V  +AAG 
Sbjct: 126 --IAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLT---GVTAVAAGR 180

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           ++  A+   G V+++G      LG G     L P  +Q        V+ +SA D   VAL
Sbjct: 181 NHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGL----TGVIAISANDSETVAL 236

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
              G V+ WG    G LG G    +  P  +  L    A  + A       L   G+++ 
Sbjct: 237 RQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTA--IAAGGGFAVALRQDGTLWA 294

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +G    G LG    G +    RP  +  L    V+ I+    HTV +   G L+ +G+N 
Sbjct: 295 WGSNSRGQLG---NGTTFGSYRPEQVQGLTG--VTAIAASGIHTVALRQDGTLWAWGNNS 349

Query: 460 RAQLGHDTLRGCLEPTEI 477
             QLG  T      P ++
Sbjct: 350 SGQLGDGTTTVRFTPVQV 367



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 159/409 (38%), Gaps = 64/409 (15%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC 188
           + +V++ G +  G LG G  T +    T +     A V  V+AS+ H   V Q G V+  
Sbjct: 489 DGTVWAWGDNARGQLGDGTTTRR---LTPVQVQGLAGVTAVAASDYHLVAVRQDGTVWAW 545

Query: 189 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
           G       G   T      P  V+ L GV    + AG N T  L   G V   G N +GQ
Sbjct: 546 GVGFWGQLGD-GTGMDRSTPVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAWGFNNYGQ 602

Query: 249 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
           LG G T    TP  +     V   V IAAG S+ +A+  +G V+++G      LG G   
Sbjct: 603 LGDGTTAGHLTPVQV---PGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTT 659

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
               P  +Q        V+ ++  + H VA+   G V+TWG    G LG G    +  P 
Sbjct: 660 HRHSPVQVQGL----ADVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPV 715

Query: 369 PLSSLKSHLAV------QVCARKRKTFV--------------------------LVDT-- 394
            +  L    A+       V  R+ +T                            L+D   
Sbjct: 716 QVHGLTDATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGLMDVTA 775

Query: 395 --------------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
                         G+++ +G   +G LG    G     L P  +  L +   + I+ G 
Sbjct: 776 MAAGGYHMAAAGQDGTLWTWGLNSYGQLG---GGPLSYRLLPVQVQGLTSATATAIAAGD 832

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
            HTV V   G ++ +G N   QLG  T    L P ++ +Q + + T +A
Sbjct: 833 SHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMA 881



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 159/376 (42%), Gaps = 23/376 (6%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT+ L  + +V++ G +  G LG G   T     T +  P     V ++A  +H
Sbjct: 576 IAAGSNHTVALRQDGTVWAWGFNNYGQLGDG---TTAGHLTPVQVPGVTGAVAIAAGGSH 632

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              +LQ G V+T G N     G   T      P  V+ L  V    +    N    + +R
Sbjct: 633 TVALLQDGTVWTWGYNIWGQLGDGTTTHR-HSPVQVQGLADV----IAIATNNGHTVAVR 687

Query: 236 --GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V T G N+ GQLG G T  R TP  +  L +  +++  +   S  +A+  +  +++
Sbjct: 688 QDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSS---SQTVAMRQDRTLWA 744

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G      LG G     L P  +Q      + V  ++AG  H+ A    G ++TWG    
Sbjct: 745 WGDNHWGQLGDGTTTRRLTPVQVQGL----MDVTAMAAGGYHMAAAGQDGTLWTWGLNSY 800

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G    + LP  +  L S  A  + A    T  +   G+V+ +G    G LG    
Sbjct: 801 GQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLG---D 857

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G + + L P  +       V+ ++ G YH       G L+ +G N   QLG   L   L 
Sbjct: 858 GTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLL 917

Query: 474 PTEIFIQEMEEDTGLA 489
           P +  +Q + + T +A
Sbjct: 918 PVQ--VQGLMDVTAMA 931



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 167/376 (44%), Gaps = 20/376 (5%)

Query: 115  MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            + I T   HT+ +  + +V++ G +  G LG G  TTQ ++  +++  + A  +  S+S+
Sbjct: 674  IAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDG-TTTQRLTPVQVHGLTDATAILTSSSQ 732

Query: 174  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
              A  + Q   ++  GDN     G   T R +  P  V+ L  V    + AG        
Sbjct: 733  TVA--MRQDRTLWAWGDNHWGQLGDGTTTRRL-TPVQVQGLMDVTA--MAAGGYHMAAAG 787

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G + T G N++GQLG G    R  P  +  L    +   IAAG S+ +AV  +G V++
Sbjct: 788  QDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSA-TATAIAAGDSHTVAVRQDGTVWA 846

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            +GS  +  LG G     L P  +Q   +  + V  ++AG  H+ A    G ++TWG    
Sbjct: 847  WGSNFSGQLGDGTTAQSLTPVQVQV--QGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSY 904

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
            G LG G    + LP  +  L    A+   A           G+++ +G   +G LG    
Sbjct: 905  GQLGGGPLSYRLLPVQVQGLMDVTAM--AAGGYHMAAAGQDGTLWTWGLNSYGQLG---G 959

Query: 414  GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            G     L P  +  L +  V+ ++ G YH       G L+ +G N   QLG   L   L 
Sbjct: 960  GPLSYRLLPVQVQGLMS--VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLT 1017

Query: 474  PTEIFIQEMEEDTGLA 489
            P ++ +Q +   TG+A
Sbjct: 1018 PVQVQVQGL---TGVA 1030


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 133/265 (50%), Gaps = 10/265 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF  R  E LK +   C   +AG N   ++T    V   G+N  G LG GDT +   P+
Sbjct: 8   PIFAFRSPEELKLIRQACVFGSAG-NEVLYVTENNEVFALGTNCSGCLGVGDTQNSVEPR 66

Query: 262 SIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  ++A T  G VY++G  +   LG+G  ++ L P  I T  
Sbjct: 67  RLDTLCGKKITCLSYGSGPHVVVA-TAEGEVYTWGHNAYSQLGNGTTNNSLLPCQIST-N 124

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 379
                V  V+ G  H + L S G VYTWG    G +G G   ++ +P  ++S L++ +AV
Sbjct: 125 LVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAV 184

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +V+ G VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 185 NIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIR---VQRVACG 241

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLG 464
             HT+V+TD G+++ +G N   QLG
Sbjct: 242 YAHTLVLTDEGQMYAWGANSYGQLG 266



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 132/304 (43%), Gaps = 13/304 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++   T         N+ VF+ G++  G LG G +T   V   R++      +  +
Sbjct: 29  SAGNEVLYVT--------ENNEVFALGTNCSGCLGVG-DTQNSVEPRRLDTLCGKKITCL 79

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+V+T G N+    G+  TN  +   ++   L      +V  G + 
Sbjct: 80  SYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHH 139

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V+T G N  GQ+G G T ++  P+ +    +    V IA G    +AV  N
Sbjct: 140 SMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVEN 199

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   ++  P  I     +GI V RV+ G  H + L   G +Y W
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGNQPTPCRIAAL--QGIRVQRVACGYAHTLVLTDEGQMYAW 257

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G LG G+  +++ P P++  K   + +  C     +        VY +G     S
Sbjct: 258 GANSYGQLGTGNRSNQSYPVPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQCRGQS 317

Query: 408 LGFP 411
           +  P
Sbjct: 318 ITLP 321



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 128/274 (46%), Gaps = 12/274 (4%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 231
           N   +V ++ +VF  G N S C G  DT   +  PR ++ L  K + C    +G +    
Sbjct: 32  NEVLYVTENNEVFALGTNCSGCLGVGDTQNSV-EPRRLDTLCGKKITCLSYGSGPHVV-V 89

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V+T G N + QLG+G T +   P  I+       V ++A G  + + +T +G V
Sbjct: 90  ATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEV 149

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y++G  ++  +G G   ++  PR + +  +  I  V ++ G    +A+  +G VY WG  
Sbjct: 150 YTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKI-AVNIACGQMCSMAVVENGEVYVWGYN 208

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G+  ++  P  +++L+     +V      T VL D G +Y +G   +G LG  
Sbjct: 209 GNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTG 268

Query: 412 DRG-----VSDKVLRPRILDSLRAH--HVSQIST 438
           +R      V   V + R+++    H  H S   T
Sbjct: 269 NRSNQSYPVPITVDKDRVIEIAACHSAHTSAAKT 302



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL-YHTV 444
            +   + +   V+  G    G LG  D   +   + PR LD+L    ++ +S G   H V
Sbjct: 32  NEVLYVTENNEVFALGTNCSGCLGVGD---TQNSVEPRRLDTLCGKKITCLSYGSGPHVV 88

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           V T  G ++ +G N  +QLG+ T    L P +I
Sbjct: 89  VATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQI 121


>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1086

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 142/304 (46%), Gaps = 21/304 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  +S    HAA + + G+VF  GD S    GH+  N  +  P++VE+L  V  K V  G
Sbjct: 312 VRSISLGRKHAALITKRGEVFCWGDGSRGKLGHK-VNMDVGMPKVVESLDDVHIKSVVCG 370

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYM 282
              T  LT  G ++T G N +G        T  +  P K   PL+ + ++ ++A G  + 
Sbjct: 371 EYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGI-TISKVACGEWHT 429

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 341
             V+ +G ++++G G+   LGHG       P+ + + R  G+ V  V+ G  H  A+   
Sbjct: 430 AIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLR--GLSVKSVACGSWHTAAIVDI 487

Query: 342 ----------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                      G ++TWG G  G LGH D   K +P  ++ L  +  ++V   +  T  L
Sbjct: 488 IADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKLVDYDFIRVSCGRMLTVAL 547

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
            +TG VY  G    G LG P     DK +   +   L+   V +IS+G YH  V+T  G 
Sbjct: 548 TNTGKVYTMGSSVHGQLGNPQ--AKDKSITI-VEGKLKEEFVKEISSGSYHVAVLTSGGN 604

Query: 452 LFGF 455
           ++ +
Sbjct: 605 VYTW 608



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 150/364 (41%), Gaps = 37/364 (10%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASEN 174
           I+ GR H  LI+    VF  G    G LGH  +    V   ++       H+  V   E 
Sbjct: 315 ISLGRKHAALITKRGEVFCWGDGSRGKLGH--KVNMDVGMPKVVESLDDVHIKSVVCGEY 372

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTN----RPIFRP-RLVEALKGVPCKQVTAGLNFT 229
               +  SG+++T GDN +   G   T+    R  + P +L   L G+   +V  G   T
Sbjct: 373 QTCALTHSGELYTWGDNKN---GANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEWHT 429

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-- 287
             +++ G + T G  T G LGHG       PK +A L  + SV  +A G  +  A+    
Sbjct: 430 AIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGL-SVKSVACGSWHTAAIVDII 488

Query: 288 ---------NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
                     G ++++G G    LGH +   +L P  +          +RVS G    VA
Sbjct: 489 ADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKL--VDYDFIRVSCGRMLTVA 546

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           L ++G VYT G    G LG+    DK++      LK     ++ +      VL   G+VY
Sbjct: 547 LTNTGKVYTMGSSVHGQLGNPQAKDKSITIVEGKLKEEFVKEISSGSYHVAVLTSGGNVY 606

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG--------LYHTVVVTDRG 450
              W   G+       + D+   P  +++LR   V  I+ G        L+ ++ VTD+ 
Sbjct: 607 --TWGKGGNGQLGLGNIEDRN-SPTYVEALRDREVESIACGSNLTAAICLHKSISVTDQS 663

Query: 451 RLFG 454
              G
Sbjct: 664 SCSG 667



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 16/270 (5%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+L+E+   +  + ++ G      +T RG V   G  + G+LGH   +D   PK +  L+
Sbjct: 301 PKLLESTAMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLD 360

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIHV 326
           +V  +  +  G     A+T +G +Y++G   N      E     Q    + F    GI +
Sbjct: 361 DV-HIKSVVCGEYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGITI 419

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
            +V+ G+ H   +  SG ++T+G G  G LGHG     + P+ ++SL+      V     
Sbjct: 420 SKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSW 479

Query: 387 KTFVLVDT-----------GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
            T  +VD            G ++ +G    G LG  D    +K L P  +  L  +   +
Sbjct: 480 HTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDM---EKKLVPTCVAKLVDYDFIR 536

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           +S G   TV +T+ G+++  G +   QLG+
Sbjct: 537 VSCGRMLTVALTNTGKVYTMGSSVHGQLGN 566



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 4/172 (2%)

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
           Q D L P+ +++     + V  +S G +H   +   G V+ WG G  G LGH   +D  +
Sbjct: 295 QVDALVPKLLESTAM--LDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGM 352

Query: 367 PEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
           P+ + SL   H+   VC  + +T  L  +G +Y +G    G+    +     + L  ++ 
Sbjct: 353 PKVVESLDDVHIKSVVCG-EYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLF 411

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             L    +S+++ G +HT +V+  G+LF +GD     LGH +L+    P E+
Sbjct: 412 GPLDGITISKVACGEWHTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEV 463



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 17/225 (7%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 173
           ++  G +HT ++S S  +F+ G    GVLGHG  + Q VS  + +       V  V+   
Sbjct: 421 KVACGEWHTAIVSLSGQLFTYGDGTFGVLGHG--SLQSVSHPKEVASLRGLSVKSVACGS 478

Query: 174 NHAAFVLQ-----------SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
            H A ++             G++FT GD      GH D  + +  P  V  L      +V
Sbjct: 479 WHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLV-PTCVAKLVDYDFIRV 537

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
           + G   T  LT  G V+T GS+ HGQLG+    D+        L+E   V +I++G  ++
Sbjct: 538 SCGRMLTVALTNTGKVYTMGSSVHGQLGNPQAKDKSITIVEGKLKE-EFVKEISSGSYHV 596

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
             +T  G VY++G G N  LG G   D   P  ++  R + +  +
Sbjct: 597 AVLTSGGNVYTWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESI 641


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 14/293 (4%)

Query: 179 VLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           V ++G +F CG     C G     D N P   P+L+  +  V    +  G      LT  
Sbjct: 172 VSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVM--VTTVAIHPGGRHAMALTAE 229

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V++ G    GQLGHG+TL    P  I  L+    V +IA G  + +AV  +G ++S+G
Sbjct: 230 GKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKS-KEVTKIACGAMHSIAVLSDGKIFSWG 288

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            GSN  LGHG    +L P+ I +    G H++ V+ G+ + +A+ +   V++WG G  G 
Sbjct: 289 DGSNGALGHGNNLAQLLPKKIMSLN--GKHIMAVACGECYTIAV-AGDDVWSWGLGGNGE 345

Query: 356 LGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
           LG+G E+    +P  + +L       V      +F +   G V+ +G      LG  +  
Sbjct: 346 LGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEK 405

Query: 415 VSDKVLRPR-ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
           V   +++PR I   L+   + ++   L+H + + + G+++ +G  E   +G+D
Sbjct: 406 V---IVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGND 455



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 12/314 (3%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           V+ S ++ +    ++  +V+  G   +      + N     P   + L+ +    +  G 
Sbjct: 109 VEKSRTDPYKEMRVEPSEVYVWGSKRNLLLAADEKNP--LEPDKSKLLENLDPSDIACGY 166

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAV 285
           +    ++  G +  CG    G LG G+  D   P+ I  L  V  + V I  G  + +A+
Sbjct: 167 DSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMAL 226

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T  G VYS+G G    LGHG     L P  I   + K   V +++ G  H +A+ S G +
Sbjct: 227 TAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSK--EVTKIACGAMHSIAVLSDGKI 284

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           ++WG G  GALGHG+ + + LP+ + SL   H+    C       V  D   V+ +G  G
Sbjct: 285 FSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGD--DVWSWGLGG 342

Query: 405 FGSLGFPDRGVS-DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
            G LG+   GV       P  +++L    ++ ++ G   +  V+  G+++ +G  +R +L
Sbjct: 343 NGELGY---GVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRL 399

Query: 464 GHDTLRGCLEPTEI 477
           G    +  ++P EI
Sbjct: 400 GLGNEKVIVKPREI 413



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 12/246 (4%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           GR+   L +   V+S G    G LGHG  T   +  T I+   +  V +++    H+  V
Sbjct: 220 GRHAMALTAEGKVYSWGCGDRGQLGHG-NTLGYLDPTLIDELKSKEVTKIACGAMHSIAV 278

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           L  G++F+ GD S+   GH + N     P+ + +L G     V  G  +T  + + G  V
Sbjct: 279 LSDGKIFSWGDGSNGALGHGN-NLAQLLPKKIMSLNGKHIMAVACGECYT--IAVAGDDV 335

Query: 239 HTCGSNTHGQLGHGDTLDRPT---PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            + G   +G+LG+G  ++ P+   P  I  L   G +  +A G +   AV+ NG V+++G
Sbjct: 336 WSWGLGGNGELGYG--VEMPSYYMPTKIEALFFKG-ITNVACGYATSFAVSANGKVWAWG 392

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           SG  F LG G +   ++PR IQ    KG  + RV A   H +A+D +G VY WG    G 
Sbjct: 393 SGDRFRLGLGNEKVIVKPREIQG-DLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGP 451

Query: 356 LGHGDE 361
           +G+ ++
Sbjct: 452 VGNDED 457



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 7/210 (3%)

Query: 106 IVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           I E  +    +I  G  H++ ++S+  +FS G    G LGHG    Q +   +I   +  
Sbjct: 257 IDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLP-KKIMSLNGK 315

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQV 222
           H++ V+  E +    +    V++ G   +   G+       + P  +EAL  KG+    V
Sbjct: 316 HIMAVACGECYT-IAVAGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGI--TNV 372

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
             G   +  ++  G V   GS    +LG G+      P+ I    +   + ++ A   + 
Sbjct: 373 ACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHA 432

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 312
           LA+  NG VY +GS     +G+ E   + Q
Sbjct: 433 LAIDENGQVYIWGSQEIGPVGNDEDAKQQQ 462



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 9/182 (4%)

Query: 312 QP--RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
           QP  R  +   ++GI V + S  D +         VY WG      L   DE +   P+ 
Sbjct: 93  QPSIRLKEELLKRGIDVEK-SRTDPYKEMRVEPSEVYVWGSKR-NLLLAADEKNPLEPDK 150

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
              L++     +       FV+   G ++  G    G LG    G  D V  PR +  L 
Sbjct: 151 SKLLENLDPSDIACGYDSLFVVSRNGGIFACGKGHMGCLGL---GNCDDVNVPRQIPQLL 207

Query: 430 AHHVSQIST--GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTG 487
              V+ ++   G  H + +T  G+++ +G  +R QLGH    G L+PT I   + +E T 
Sbjct: 208 PVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTK 267

Query: 488 LA 489
           +A
Sbjct: 268 IA 269


>gi|387018578|gb|AFJ51407.1| Serine/threonine-protein kinase Nek9-like [Crotalus adamanteus]
          Length = 963

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 348 PQKLDVIKNGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 407

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 319
            +  L+   ++ Q++ G  + + +T  G  ++FGS    C+G  +    + L+PR I  F
Sbjct: 408 HVEKLQG-KAIRQVSCGDDFTICITDEGQAFAFGSDYYGCIGIDKAFGSEVLEPRQINFF 466

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HV  L  +  VYTWG G  G LG   E D ++P+ +   K+   V
Sbjct: 467 SSNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHSIPQKVEIQKTSNIV 524

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 429
            V      TF+L   G V   G   F  LG      G+ +      I           L 
Sbjct: 525 SVQCGSDGTFLLTQAGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYATTFTLAKKLS 584

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 585 FYKIRTIAPGKTHTAAIDERGRLLTFGSNKCGQLG 619



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 117/281 (41%), Gaps = 33/281 (11%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 173
           Q++ G   T+ I++    F+ GS   G +G      ++ +   +INF S+  V QVS  +
Sbjct: 419 QVSCGDDFTICITDEGQAFAFGSDYYGCIGIDKAFGSEVLEPRQINFFSSNPVEQVSCGD 478

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           NH A + ++ +V+T G      CG       D+      P+ VE  K      V  G + 
Sbjct: 479 NHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHSIPQKVEIQKTSNIVSVQCGSDG 532

Query: 229 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRP--TPKSIAPLEEVGSVVQIA 276
           T  LT  G V  CG N   +LG          H    + P  T  ++A       +  IA
Sbjct: 533 TFLLTQAGKVLACGLNEFNKLGLNQCTSGIINHDAYQEIPYATTFTLAKKLSFYKIRTIA 592

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G ++  A+   G + +FGS     LG G+    L    +      G  V+RVS GDE  
Sbjct: 593 PGKTHTAAIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLGG-PLGGKQVIRVSCGDEFT 651

Query: 337 VALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPL 370
           +A     +++ WG G  G L        H  +I  + P P+
Sbjct: 652 IAATDDNHIFAWGNGGNGRLAMTPTERAHSSDICTSWPRPI 692



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 6/166 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 355 KNGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 414

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G  + FG   +G +G  D+    +VL PR ++   ++ V Q
Sbjct: 415 KAIRQVSCGDDFTICITDEGQAFAFGSDYYGCIGI-DKAFGSEVLEPRQINFFSSNPVEQ 473

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ IQ+
Sbjct: 474 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHSIPQKVEIQK 519


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 157/364 (43%), Gaps = 24/364 (6%)

Query: 126 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           ++S +S+ + GS   G LG G  E  +         P +   V VS S N  A +   G 
Sbjct: 1   MVSATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSV-VSGSRNSLA-ICDDGT 58

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  MFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 245 THGQLGH---GDTLDRPT------PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            +GQ G     D + RP       PK  AP     +V Q+AAG ++ + +T  G V+++G
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL---TVRQVAAGGTHSVVLTREGHVWTWG 175

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                    G+      P  +Q      I    ++ G  H +AL+  G +  WG    G 
Sbjct: 176 Q----PWPPGDIKQIFVPVRVQGLENVSI----IAVGAFHNLALEEDGRLLAWGNNEYGQ 227

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG GD    + P P+  L     V + A    +  L D G VYG+G    G LGF D   
Sbjct: 228 LGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDK 287

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           S K++ P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+       +P 
Sbjct: 288 SSKMV-PQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPL 346

Query: 476 EIFI 479
           E+ I
Sbjct: 347 ELPI 350



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 130/303 (42%), Gaps = 18/303 (5%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           + +G  ++L I  + ++F+ G +  G LGH PET      +R+   +   + Q +    H
Sbjct: 43  VVSGSRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWH 102

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLV--EALKGVPCKQVTAGLNFT 229
              V   G+ +  G N    CG      +  RP+ R  ++       +  +QV AG   +
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHS 162

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT  GHV T G         GD      P  +  LE   +V  IA G  + LA+  +G
Sbjct: 163 VVLTREGHVWTWGQ----PWPPGDIKQIFVPVRVQGLE---NVSIIAVGAFHNLALEEDG 215

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            + ++G+     LG G+      P  +       + +V ++AG  H  AL   G VY WG
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVHGL--DDLTLVDIAAGGWHSTALTDKGEVYGWG 273

Query: 350 KGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           +G  G LG G  D+  K +P+ ++ L     +QV      +  L   G ++ FG    G 
Sbjct: 274 RGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGR 333

Query: 408 LGF 410
           LG+
Sbjct: 334 LGY 336


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 176/375 (46%), Gaps = 28/375 (7%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           S   + ++   + HTL       F+ G +  G LG G  TTQ  S T +     + +V+ 
Sbjct: 456 SVAERKKVNMAQVHTL-------FAWGHNTNGELGDG-TTTQRTSPTAV---VVSGIVKT 504

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           +    H+  +   G V+T G N+    G+  T + +   +L   + GV    V AG+N T
Sbjct: 505 AGGSAHSVALGAGGAVWTWGYNAYGQLGNGTTTQVVTPTQL-PGMSGV--IDVAAGVNHT 561

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             L+  G V   G N +GQLG+G T ++ TP+S+  L+    V  I+AG ++ +A+  +G
Sbjct: 562 VALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELD---GVTAISAGSTHTVALKADG 618

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++GS     LG G       P  + +      +VV ++AG  H VA+   G ++ WG
Sbjct: 619 TVWAWGSNLYGQLGDGTFTHRSSPVQVPSLE----NVVSIAAGHFHTVAVKGDGTLWVWG 674

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            G  G LG G   ++++P  +S L    AV + A    T  L+  G V+ +G+   G LG
Sbjct: 675 YGPQGQLGLGTTTNQSVPVQVSGLGH--AVAIAAGGYHTVALLANGQVWTWGYNSSGQLG 732

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
             D  +  +   P ++  L   +V  ++ G Y T V+   G ++ FG N   QLG  T  
Sbjct: 733 --DATIIQR-YSPVLVPGLT--NVIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTT 787

Query: 470 GCLEPTEIFIQEMEE 484
               PT   +  + +
Sbjct: 788 SRSSPTATLMNSVVD 802



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 168/379 (44%), Gaps = 30/379 (7%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G YHTL + S  S+++ G++  G LG+G + TQ  + TR+       VV  SA   H
Sbjct: 150 VSPGVYHTLEVKSGGSLWAWGNNPSGQLGNG-QRTQRNAPTRVR--GLNQVVSASAGAEH 206

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  V + G V+T G N+    G   TN     P  V  +  V    V A  + T  L   
Sbjct: 207 SVAVTEDGSVWTWGSNAYGQLGD-GTNTLRAVPVQVPGMSDVVA--VAAAGSRTVALKAD 263

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V T G N+ G+LG G T     P  +  L     V  IAAG  + LAV  +G  +S+G
Sbjct: 264 GTVWTWGINSSGELGDGTTTHSLLPIQVPNLS---GVTNIAAGLWHTLAVKKDGSAWSWG 320

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCG 354
           + +   LG G   + L+P  +      G+  VR +S G  H VAL   G  + WG    G
Sbjct: 321 NNAYGQLGDGTTLNRLRPVLV-----AGLTGVRALSGGVVHTVALKWDGTAWGWGYNSAG 375

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG+G   + ++P  +++L    AV++ A    T      G++Y +G   +G+LG  +  
Sbjct: 376 QLGNGTTTNSSIPVQVAALTQ--AVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNT- 432

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR------LFGFGDNERAQLGHDTL 468
            S  V     L  +R         G Y++V    +        LF +G N   +LG  T 
Sbjct: 433 TSSSVPVQVPLSGVR-----WFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTT 487

Query: 469 RGCLEPTEIFIQEMEEDTG 487
                PT + +  + +  G
Sbjct: 488 TQRTSPTAVVVSGIVKTAG 506



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 189/482 (39%), Gaps = 78/482 (16%)

Query: 50  PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN--GNWKRVLRFLQ-SVEHSSDI 106
           P + R L  + ++   A HS+      +V     N     G+    LR +   V   SD+
Sbjct: 188 PTRVRGLNQVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSDV 247

Query: 107 VETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV 166
           V  +A        G     L ++ +V++ G +  G LG G   T   S   I  P+ + V
Sbjct: 248 VAVAA-------AGSRTVALKADGTVWTWGINSSGELGDG---TTTHSLLPIQVPNLSGV 297

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAG 225
             ++A   H   V + G  ++ G+N+    G   T NR   RP LV  L GV  + ++ G
Sbjct: 298 TNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNR--LRPVLVAGLTGV--RALSGG 353

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
           +  T  L   G     G N+ GQLG+G T +   P  +A L +    V+I AG  + LA 
Sbjct: 354 VVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAALTQA---VEIDAGGYHTLAR 410

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-----RAIQTF---------RRKGIH------ 325
             +G +Y++G      LG G       P       ++ F          RK ++      
Sbjct: 411 RQDGTLYAWGDNFYGALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHT 470

Query: 326 ------------------------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                                         +V+ + G  H VAL + G V+TWG    G 
Sbjct: 471 LFAWGHNTNGELGDGTTTQRTSPTAVVVSGIVKTAGGSAHSVALGAGGAVWTWGYNAYGQ 530

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG+G       P  L  +     + V A    T  L   G+V  +G+  +G LG    G 
Sbjct: 531 LGNGTTTQVVTPTQLPGMSG--VIDVAAGVNHTVALSADGTVAAWGYNAYGQLG---NGT 585

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           +   L P+ +  L    V+ IS G  HTV +   G ++ +G N   QLG  T      P 
Sbjct: 586 TANQLTPQSVPELDG--VTAISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPV 643

Query: 476 EI 477
           ++
Sbjct: 644 QV 645



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 170/384 (44%), Gaps = 34/384 (8%)

Query: 88  GNWKRVLRFLQS-VEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG 146
           GN +R  R   + V   + +V  SAG +  +        +  + SV++ GS+  G LG G
Sbjct: 178 GNGQRTQRNAPTRVRGLNQVVSASAGAEHSVA-------VTEDGSVWTWGSNAYGQLGDG 230

Query: 147 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 206
             T + V    +  P  + VV V+A+ +    +   G V+T G NSS   G   T   + 
Sbjct: 231 TNTLRAVP---VQVPGMSDVVAVAAAGSRTVALKADGTVWTWGINSSGELGDGTTTHSLL 287

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
            P  V  L GV    + AGL  T  +   G   + G+N +GQLG G TL+R  P  +A L
Sbjct: 288 -PIQVPNLSGV--TNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGL 344

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
                V  ++ G  + +A+  +G  + +G  S   LG+G   +   P  +    +     
Sbjct: 345 T---GVRALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAALTQA---- 397

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP--EPLSSLKSHLA---VQV 381
           V + AG  H +A    G +Y WG  + GALG G+    ++P   PLS ++   A     V
Sbjct: 398 VEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVPLSGVRWFGAGYYYSV 457

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
             RK+     V T  ++ +G    G LG    G + +   P    ++    + + + G  
Sbjct: 458 AERKKVNMAQVHT--LFAWGHNTNGELG---DGTTTQRTSPT---AVVVSGIVKTAGGSA 509

Query: 442 HTVVVTDRGRLFGFGDNERAQLGH 465
           H+V +   G ++ +G N   QLG+
Sbjct: 510 HSVALGAGGAVWTWGYNAYGQLGN 533



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 120/271 (44%), Gaps = 16/271 (5%)

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
           C  V+ G+  T  +   G +   G+N  GQLG+G    R  P  +  L +   VV  +AG
Sbjct: 147 CPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQ---VVSASAG 203

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             + +AVT +G V+++GS +   LG G       P  +         VV V+A     VA
Sbjct: 204 AEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMS----DVVAVAAAGSRTVA 259

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           L + G V+TWG    G LG G      LP  + +L       + A    T  +   GS +
Sbjct: 260 LKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSG--VTNIAAGLWHTLAVKKDGSAW 317

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G   +G LG    G +   LRP ++  L    V  +S G+ HTV +   G  +G+G N
Sbjct: 318 SWGNNAYGQLG---DGTTLNRLRPVLVAGLTG--VRALSGGVVHTVALKWDGTAWGWGYN 372

Query: 459 ERAQLGHDTLRGCLEPTEI--FIQEMEEDTG 487
              QLG+ T      P ++    Q +E D G
Sbjct: 373 SAGQLGNGTTTNSSIPVQVAALTQAVEIDAG 403



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 161/374 (43%), Gaps = 41/374 (10%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  HT+ +  + + +  G +  G LG+G  T   +    +   +    V++ A   H
Sbjct: 350 LSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIP---VQVAALTQAVEIDAGGYH 406

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
                Q G ++  GDN     G  +T     P+  P     L GV  +   AG  ++   
Sbjct: 407 TLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVP-----LSGV--RWFGAGYYYSVAE 459

Query: 233 TIR---GHVHT---CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
             +     VHT    G NT+G+LG G T  R +P ++     V  +V+ A G ++ +A+ 
Sbjct: 460 RKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVV----VSGIVKTAGGSAHSVALG 515

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
             G V+++G  +   LG+G     + P  +         V+ V+AG  H VAL + G V 
Sbjct: 516 AGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMS----GVIDVAAGVNHTVALSADGTVA 571

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
            WG    G LG+G   ++  P+ +  L    A+   A    T  L   G+V+ +G   +G
Sbjct: 572 AWGYNAYGQLGNGTTANQLTPQSVPELDGVTAI--SAGSTHTVALKADGTVWAWGSNLYG 629

Query: 407 SLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
            LG   F  R  S  V  P +       +V  I+ G +HTV V   G L+ +G   + QL
Sbjct: 630 QLGDGTFTHR--SSPVQVPSL------ENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQL 681

Query: 464 GHDTLRGCLEPTEI 477
           G  T      P ++
Sbjct: 682 GLGTTTNQSVPVQV 695



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 17/259 (6%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  HT+ L ++ +V++ GS+L G LG G  T +    + +  PS  +VV ++A   H
Sbjct: 604 ISAGSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRS---SPVQVPSLENVVSIAAGHFH 660

Query: 176 AAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
              V   G ++  G       G    TN+ +  P  V  L       + AG   T  L  
Sbjct: 661 TVAVKGDGTLWVWGYGPQGQLGLGTTTNQSV--PVQVSGLG--HAVAIAAGGYHTVALLA 716

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V T G N+ GQLG    + R +P  +  L  V   + +AAG      +  +G V++F
Sbjct: 717 NGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLTNV---IALAAGGYTTAVLKRDGTVWAF 773

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G       P A  T       VV +S+G  H++ L    +V   G    G
Sbjct: 774 GYNPNGQLGDGTTTSRSSPTA--TLMNS---VVDLSSGVNHMMGLRKDAWVRACGYNSAG 828

Query: 355 ALGHGDEIDKTLPEPLSSL 373
            LG G    +  P  +++L
Sbjct: 829 QLGDGTTTQRPTPVQVTNL 847



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 10/164 (6%)

Query: 112 GNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 170
           G+ + I  G YHT+ L++N  V++ G +  G LG   + T    ++ +  P   +V+ ++
Sbjct: 699 GHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLG---DATIIQRYSPVLVPGLTNVIALA 755

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           A     A + + G V+  G N +   G    T+R      L+ ++       +++G+N  
Sbjct: 756 AGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVV-----DLSSGVNHM 810

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
             L     V  CG N+ GQLG G T  RPTP  +  L   GS+V
Sbjct: 811 MGLRKDAWVRACGYNSAGQLGDGTTTQRPTPVQVTNLPGDGSIV 854


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 124/257 (48%), Gaps = 6/257 (2%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           Q   G   +  L   G V +CG+N+ GQLG         P  I  LE    +V ++ G  
Sbjct: 41  QAACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALE-TQDIVSVSCGKE 99

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           + LA+   G V+S+GSGS+  LG  E +     P+ I         +++VS G  H +AL
Sbjct: 100 HSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDEL--SSFKIIQVSCGHYHSIAL 157

Query: 340 DSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
              G V++WGK   G LG G+ +  +  P+ + SL      QV A    +F L  +G+ Y
Sbjct: 158 AQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSY 217

Query: 399 GFGWMGFGSLGFPDRGVS-DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           G+G    G L    +  S +++ +P  +  L+   V+ IS G  HT V+T  G++F FG 
Sbjct: 218 GWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGS 277

Query: 458 NERAQLGHDTLRGCLEP 474
           N+  QLG   + G   P
Sbjct: 278 NDSGQLGRQLISGMKGP 294



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 18/260 (6%)

Query: 110 SAGNQ--MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSA 163
           S GNQ  +Q   G  H+LL+ S+ +V+SCG++ CG LG      +C    R   I     
Sbjct: 33  SLGNQTLLQAACGERHSLLLLSDGTVWSCGNNSCGQLGR----KRCQKHGRPAQIQALET 88

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
             +V VS  + H+  + + G+VF+ G  S    G R+  +    P+ ++ L      QV+
Sbjct: 89  QDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVS 148

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  L   G V + G N HGQLG G+ +  + +P+ +  L+ +  + Q+AAG ++ 
Sbjct: 149 CGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGI-PLAQVAAGGAHS 207

Query: 283 LAVTGNGVVYSFG---SGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            A++ +G  Y +G   +G     G  E  +++ +P +I   +R  + V  +S GDEH   
Sbjct: 208 FALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKR--LQVTYISCGDEHTAV 265

Query: 339 LDSSGYVYTWGKGYCGALGH 358
           L   G V+T+G    G LG 
Sbjct: 266 LTQDGKVFTFGSNDSGQLGR 285


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 6/195 (3%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVS 330
           V Q+A G  + +A+T  G VY++G  S   LG G++   +  P+ +++    G+ +V+VS
Sbjct: 119 VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSL--SGMPLVQVS 176

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           AG +H  AL  SG V+ WG+  CG LG GD  D+  P  + SL       +   K  T +
Sbjct: 177 AGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAI 236

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L   G+V+ FG   FG LG      S   LRPR++  L    V++I+ G YHT+V+ +  
Sbjct: 237 LTKHGTVFTFGSGQFGQLG---HNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQENN 293

Query: 451 RLFGFGDNERAQLGH 465
           +++ FG N++ QLG 
Sbjct: 294 KIYSFGCNDQNQLGR 308



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 3/205 (1%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V QV+    H   + + GQV+T G NS    G       I  P+ V +L G+P  QV+AG
Sbjct: 119 VSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAG 178

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            + +  L++ G V   G N  GQLG GD+ DR TP S+  L  +     I+ G  +   +
Sbjct: 179 GDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSL-NLKKTTSISCGKDHTAIL 237

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T +G V++FGSG    LGH    +EL+PR +      G  V R++ G  H + L  +  +
Sbjct: 238 TKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELW--GAKVTRIACGRYHTLVLQENNKI 295

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPL 370
           Y++G      LG  ++   ++P P+
Sbjct: 296 YSFGCNDQNQLGRSNDSHPSVPLPV 320



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 28/268 (10%)

Query: 153 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT----------CGDNSSFCCGHR--- 199
           ++F + N    A V++ S  EN A   ++  Q F           CGD+       +   
Sbjct: 41  LAFAKTN--GNAFVMRTSDGENGAR--MRGKQKFVKCKEKIEAVGCGDDEVILLSEKGSV 96

Query: 200 ---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-L 255
              D  + ++ PR++EA   +P  QV  G   T  LT  G V+T G N+ GQLG G    
Sbjct: 97  YRVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGC 156

Query: 256 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQP 313
              +P+ +  L  +  +VQ++AG  +  A++ +G V  FG G N C  LG G+  D   P
Sbjct: 157 SISSPQCVRSLSGM-PLVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDSQDRCTP 213

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
            ++ +   K      +S G +H   L   G V+T+G G  G LGH    ++  P  ++ L
Sbjct: 214 TSVDSLNLK--KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAEL 271

Query: 374 KSHLAVQVCARKRKTFVLVDTGSVYGFG 401
                 ++   +  T VL +   +Y FG
Sbjct: 272 WGAKVTRIACGRYHTLVLQENNKIYSFG 299



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 83/163 (50%), Gaps = 6/163 (3%)

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLS 371
           PR ++ F R  I V +V+ G  H VAL   G VYTWG+   G LG G +    + P+ + 
Sbjct: 108 PRMLEAFCR--IPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVR 165

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL     VQV A    +F L  +GSV+G+G    G LG  D   S     P  +DSL   
Sbjct: 166 SLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGD---SQDRCTPTSVDSLNLK 222

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             + IS G  HT ++T  G +F FG  +  QLGH++ R  L P
Sbjct: 223 KTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRP 265



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 3/140 (2%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q++ G  H+  +S S SVF  G + CG LG G    +C   T ++  +      +S  +
Sbjct: 173 VQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTP-TSVDSLNLKKTTSISCGK 231

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +H A + + G VFT G       GH +++R   RPRLV  L G    ++  G   T  L 
Sbjct: 232 DHTAILTKHGTVFTFGSGQFGQLGH-NSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQ 290

Query: 234 IRGHVHTCGSNTHGQLGHGD 253
               +++ G N   QLG  +
Sbjct: 291 ENNKIYSFGCNDQNQLGRSN 310



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 20/205 (9%)

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
            + ++  +G+ F +   +  +  + R  Q F +    +  V  GD+ V+ L   G VY  
Sbjct: 40  ALAFAKTNGNAFVMRTSDGENGARMRGKQKFVKCKEKIEAVGCGDDEVILLSEKGSVY-- 97

Query: 349 GKGYCGALGHGDEIDKT----LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
                        +D T    LP  L +       QV    R T  L   G VY +G   
Sbjct: 98  ------------RVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNS 145

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG   +G S  +  P+ + SL    + Q+S G  H+  ++  G +FG+G N+  QLG
Sbjct: 146 RGQLGLGKKGCS--ISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLG 203

Query: 465 HDTLRGCLEPTEIFIQEMEEDTGLA 489
               +    PT +    +++ T ++
Sbjct: 204 LGDSQDRCTPTSVDSLNLKKTTSIS 228


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 139/304 (45%), Gaps = 20/304 (6%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            HAA   + G+VF  G       G +  +  I  P++V++L G+  K V  G   T  LT
Sbjct: 314 KHAALATKQGEVFCWGHGKWGRLGQK-IDMDISSPKIVDSLNGLHVKNVACGEYHTCALT 372

Query: 234 IRGHVHTCGSNT--HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
             G V+T G++      L  G T  +  P+ +    +  S+  +A G  +   V+  G +
Sbjct: 373 DSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHTAIVSSCGRL 432

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-----------D 340
           +++G G+   LGHG+      P+ +++    G+ V   + G  H  A+            
Sbjct: 433 FTYGDGTFGVLGHGDLRSYSSPKEVESL--SGLRVRSAACGSWHTAAIVEVMFDRFRYNS 490

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           +SG ++TWG G  G LGH D   K +P  ++ L  +  VQV   +  T  L + G V+  
Sbjct: 491 ASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAM 550

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   +G LG P     DK +   +   L+   V  ISTG YH  V+T  G ++ +G  E 
Sbjct: 551 GSAKYGQLGNPH--ARDKAV--MVEGQLKQEFVKVISTGSYHVAVLTSGGSVYTWGRGEN 606

Query: 461 AQLG 464
            QLG
Sbjct: 607 GQLG 610



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 153/347 (44%), Gaps = 28/347 (8%)

Query: 46  HGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSD 105
           + L P+   S   L    + AL   +A ++   Q E+    +G W R+ + +     S  
Sbjct: 291 YSLVPKLLESTAMLDVHNI-ALGGKHAALATK-QGEVFCWGHGKWGRLGQKIDMDISSPK 348

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLC--GVLGHGPETTQCVSFTRINFP 161
           IV++  G  ++ +  G YHT  +++S  V++ G+ +C   +L  G   +Q +        
Sbjct: 349 IVDSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSL 408

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
               +  V+  E H A V   G++FT GD +    GH D  R    P+ VE+L G+  + 
Sbjct: 409 DGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDL-RSYSSPKEVESLSGLRVRS 467

Query: 222 VTAGLNFTG-----------FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
              G   T            + +  G + T G    G+LGH D   +  P  +  L +  
Sbjct: 468 AACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDY- 526

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVV 327
             VQ++ G    +A+T  G V++ GS     LG+    D+   ++ +  Q F      V 
Sbjct: 527 DFVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAVMVEGQLKQEF------VK 580

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            +S G  HV  L S G VYTWG+G  G LG GD  D+  P  + +L+
Sbjct: 581 VISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALR 627



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 22/277 (7%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+L+E+   +    +  G       T +G V   G    G+LG    +D  +PK +  L 
Sbjct: 295 PKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLN 354

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC----LGHGEQHDELQPRAIQTFRRKG 323
            +  V  +A G  +  A+T +G VY++G+  + C    L  G    +  P+ +      G
Sbjct: 355 GL-HVKNVACGEYHTCALTDSGEVYTWGN--DVCCADLLIEGRTRSQWIPQKLGG-SLDG 410

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           I +  V+ G+ H   + S G ++T+G G  G LGHGD    + P+ + SL          
Sbjct: 411 ISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAAC 470

Query: 384 RKRKTFVLVD-----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
               T  +V+           +G ++ +G    G LG  D G     L P  +  L  + 
Sbjct: 471 GSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSK---LVPTRVTQLVDYD 527

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
             Q+S G   TV +T+ G++F  G  +  QLG+   R
Sbjct: 528 FVQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHAR 564



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 96/221 (43%), Gaps = 21/221 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  IA G  +    T  G V+ +G G    LG     D   P+ + +    G+HV  V+ 
Sbjct: 306 VHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSL--NGLHVKNVAC 363

Query: 332 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKT 388
           G+ H  AL  SG VYTWG   C A  L  G    + +P+ L  SL       V   +  T
Sbjct: 364 GEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHT 423

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            ++   G ++ +G   FG LG  D R  S     P+ ++SL    V   + G +HT  + 
Sbjct: 424 AIVSSCGRLFTYGDGTFGVLGHGDLRSYSS----PKEVESLSGLRVRSAACGSWHTAAIV 479

Query: 448 ----DR-------GRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               DR       G+LF +GD +  +LGH      L PT +
Sbjct: 480 EVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRV 520



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 18/224 (8%)

Query: 117 ITTGRYHTLLISN-SSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 163
           +  G +HT ++S+   +F+ G    GVLGHG       P+  + +S  R+   +      
Sbjct: 416 VACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHT 475

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V    +   +   SG++FT GD      GH D    +  P  V  L      QV+
Sbjct: 476 AAIVEVMF--DRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLV-PTRVTQLVDYDFVQVS 532

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G   T  LT  G V   GS  +GQLG+    D+         +E   V  I+ G  ++ 
Sbjct: 533 CGRMLTVALTNMGKVFAMGSAKYGQLGNPHARDKAVMVEGQLKQEFVKV--ISTGSYHVA 590

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            +T  G VY++G G N  LG G+  D   P  ++  R + ++ +
Sbjct: 591 VLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTI 634



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 4/168 (2%)

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
           L P+ +++     +H   ++ G +H       G V+ WG G  G LG   ++D + P+ +
Sbjct: 293 LVPKLLESTAMLDVH--NIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIV 350

Query: 371 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW-MGFGSLGFPDRGVSDKVLRPRILDSLR 429
            SL       V   +  T  L D+G VY +G  +    L    R  S  + + ++  SL 
Sbjct: 351 DSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQ-KLGGSLD 409

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
              +S ++ G +HT +V+  GRLF +GD     LGH  LR    P E+
Sbjct: 410 GISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEV 457



 Score = 46.2 bits (108), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 75/169 (44%), Gaps = 13/169 (7%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           RY++   ++  +F+ G    G LGH    ++ V  TR+        VQVS        + 
Sbjct: 487 RYNS---ASGKLFTWGDGDEGRLGHVDNGSKLVP-TRVTQLVDYDFVQVSCGRMLTVALT 542

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPR--LVEA-LKGVPCKQVTAGLNFTGFLTIRGH 237
             G+VF  G       G+     P  R +  +VE  LK    K ++ G      LT  G 
Sbjct: 543 NMGKVFAMGSAKYGQLGN-----PHARDKAVMVEGQLKQEFVKVISTGSYHVAVLTSGGS 597

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           V+T G   +GQLG GDT DR TP  +  L +   V  I  GPS+  A++
Sbjct: 598 VYTWGRGENGQLGLGDTEDRYTPCFVEALRDR-QVNTITCGPSFTAAIS 645


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  114 bits (284), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 88/296 (29%), Positives = 138/296 (46%), Gaps = 14/296 (4%)

Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
           I   S   +V VS    H+A V  +G++ T G       GH DT   +  P+++++L   
Sbjct: 683 IKLESLTDIVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQV-EPKVIQSLTSF 741

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
              QV  G   T  LT  G V+T GS+ +GQLG GDT     P  +  LE+  +V+QIA+
Sbjct: 742 WITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKY-NVLQIAS 800

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G ++   +T +  V  FG+G+            L P        K +H+ ++  G     
Sbjct: 801 GSTHCAVLTNSKEVLVFGNGAAMGAASIISIPTLVPSL------KYLHIDKLCCGHYSTA 854

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           A+   G VYTWG G    LGHG+   ++ P+ + +L++    Q+    R T  L D+G +
Sbjct: 855 AISECGDVYTWGTGQ--ELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRI 912

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +  G   FG LG    G  +K   P+ ++SL       +S G  + + + D  R F
Sbjct: 913 FTSGKDSFGQLGH-QAGDQNK---PKKIESLTKTTFISVSCGENYNIALFDTTRSF 964



 Score =  100 bits (249), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 77/297 (25%), Positives = 125/297 (42%), Gaps = 63/297 (21%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP----------LEEVGS 271
           +++G  ++  LT  G V+          G G   + P P    P          LE +  
Sbjct: 639 ISSGSYYSAALTENGDVY--------MWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTD 690

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           +V ++ G  +  AV  NG + ++G G    LGHG+  ++++P+ IQ+       + +V  
Sbjct: 691 IVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSL--TSFWITQVQC 748

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           G++H + L  +G VYTWG    G LG GD      P P+++L+ +  +Q+ +      VL
Sbjct: 749 GEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVL 808

Query: 392 VDTGSVYGFG---WMGFGSL-GFPDRGVSDKVLR-------------------------- 421
            ++  V  FG    MG  S+   P    S K L                           
Sbjct: 809 TNSKEVLVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTG 868

Query: 422 -------------PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
                        P+++++LR   + QIS G  HT  +TD GR+F  G +   QLGH
Sbjct: 869 QELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGH 925



 Score =  100 bits (248), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 74/233 (31%), Positives = 117/233 (50%), Gaps = 17/233 (7%)

Query: 233 TIRGHVHTCGSNTHGQLGH---GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
           T RG + T GS ++ +LG         +PTP+ + P   V  +  I++G  Y  A+T NG
Sbjct: 596 TSRG-LMTWGSASNCKLGFKVASKEQSQPTPERL-PNFNVSDICSISSGSYYSAALTENG 653

Query: 290 VVYSFGSGSNF-----CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            VY +G GS        LG  +  D+L P  +++       +V VS G  H  A+ ++G 
Sbjct: 654 DVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESL----TDIVVVSIGFYHSAAVRANGE 709

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           + TWG G  G LGHGD  ++  P+ + SL S    QV   ++ T  L   G VY +G   
Sbjct: 710 LLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSE 769

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           +G LG  D   + +  +P  + +L  ++V QI++G  H  V+T+   +  FG+
Sbjct: 770 YGQLGLGD---TTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGN 819



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 49/216 (22%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  HT+ L  N  V++ GSS  G LG G  T  C     +      +V+Q+++   
Sbjct: 745 QVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMP-VTALEKYNVLQIASGST 803

Query: 175 HAAFVLQSGQVFTCGDNSS-----------------------FCCGHRDT---------- 201
           H A +  S +V   G+ ++                        CCGH  T          
Sbjct: 804 HCAVLTNSKEVLVFGNGAAMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVY 863

Query: 202 ------------NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
                       N+    P+LVEAL+    +Q++ G   T FLT  G + T G ++ GQL
Sbjct: 864 TWGTGQELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQL 923

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
           GH    D+  PK I  L +  + + ++ G +Y +A+
Sbjct: 924 GH-QAGDQNKPKKIESLTKT-TFISVSCGENYNIAL 957



 Score = 47.8 bits (112), Expect = 0.014,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 13/149 (8%)

Query: 337 VALDSSGYVYTWGKGYCGALGH---GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           + LD+S  + TWG      LG      E  +  PE L +        + +    +  L +
Sbjct: 592 IHLDTSRGLMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTE 651

Query: 394 TGSVYGFGWMGFGS-----LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
            G VY +G     +     LG P   + D++L P  L+SL    +  +S G YH+  V  
Sbjct: 652 NGDVYMWGRGSVKNPPVPVLGIPQ--IEDQLL-PIKLESLT--DIVVVSIGFYHSAAVRA 706

Query: 449 RGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            G L  +G  E  QLGH   +  +EP  I
Sbjct: 707 NGELLTWGVGEEGQLGHGDTQNQVEPKVI 735


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 25/307 (8%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
           +++S  + H A V ++G++F  G N+      G + T   + +P  V+AL+    K    
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTT---VNKPTCVKALRSERVKLTAC 95

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   T   T RG+++ CG N  GQLG GD  DR +   +    + G +  +AAG +   A
Sbjct: 96  GRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAA 155

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +T +G +Y  G  S   +G G++ + L P+ +   +R    V  VS G  H   +   G 
Sbjct: 156 LTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKR----VFWVSCGYYHSAFVTVDGA 211

Query: 345 VYTWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           +YT+G+   G LG   E   +  +P+ ++ +   + VQV      T  L +   VY FG 
Sbjct: 212 LYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV-VQVACGGGHTVALTE-NEVYSFGL 269

Query: 403 MGFGSLG-----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
             FG LG     F  R        PR+++  R   V   + G  HT ++TD G L+ FGD
Sbjct: 270 GQFGQLGHGTFIFESR-------LPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGD 322

Query: 458 NERAQLG 464
               +LG
Sbjct: 323 GRHGKLG 329



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 157/346 (45%), Gaps = 33/346 (9%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQV 169
           ++I+ G  HT L++ N  +F  GS+  G LG G +TT     CV   R     +  V   
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALR-----SERVKLT 93

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEAL-KGVPCKQVTAGLN 227
           +    H       G ++ CG N+    G  D N R  F   LVE   K  P K + AG N
Sbjct: 94  ACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSF--HLVEFFNKQGPIKMLAAGSN 151

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVT 286
            +  LT  G ++  G N+ GQ+G G   +  TP+ ++    VG  V  ++ G  +   VT
Sbjct: 152 TSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS----VGKRVFWVSCGYYHSAFVT 207

Query: 287 GNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +G +Y+FG   +  LG   +   +   P+ +     +   VV+V+ G  H VAL +   
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR---VVQVACGGGHTVAL-TENE 263

Query: 345 VYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
           VY++G G  G LGHG  I +  LP  +   +          +  T ++ D G +Y FG  
Sbjct: 264 VYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDG 323

Query: 404 GFGSLGFPDRGVSDK---VLRPRILDSLRAHHVSQISTGLYHTVVV 446
             G LG  +   +++    L PR LD    +HV  ++ G  H +V+
Sbjct: 324 RHGKLGLGEENFTNQFKPTLCPRFLD----YHVHSVTCGGCHMLVL 365



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 16/192 (8%)

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V++FG  S F              A   F  K    +R+S GDEH   +  +G ++ +
Sbjct: 13  GAVFTFGK-SKFA-----------DNAPSKFWLKNDVPLRISCGDEHTALVTENGKLFMF 60

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G LG G +     P  + +L+S  + +  C R   T V    G++Y  G    G 
Sbjct: 61  GSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTH-TLVFTSRGNLYACGGNNEGQ 119

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  D   +D+     +    +   +  ++ G   +  +T  GRL+  GDN   Q+G   
Sbjct: 120 LGLGD--CNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGK 177

Query: 468 LRGCLEPTEIFI 479
               L P E+ +
Sbjct: 178 ESNALTPQEVSV 189



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 8/198 (4%)

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
           ++I+ G  +   VT NG ++ FGS +   LG G +    +P  ++  R + + +   + G
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLT--ACG 96

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT-FVL 391
             H +   S G +Y  G    G LG GD  D+T    +        +++ A    T   L
Sbjct: 97  RTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAAL 156

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
              G +Y  G    G +G    G     L P+ +       V  +S G YH+  VT  G 
Sbjct: 157 TQDGRLYMRGDNSEGQIGL---GKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTVDGA 211

Query: 452 LFGFGDNERAQLGHDTLR 469
           L+ FG+ +  +LG  T +
Sbjct: 212 LYTFGEKDSGKLGLSTEK 229


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 146/323 (45%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 277 VQQIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACG 335

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 336 EFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHS 394

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
                +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 395 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEI 452

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                    S  ++TWG G    LGHGD+  K +P  + +L  H   QV      T  L 
Sbjct: 453 SGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALA 512

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G    G LG P    +D      + D L    V +IS G  H   +T R  +
Sbjct: 513 TSGHVFTMGSSNNGQLGNPK---ADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEV 569

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH ++    +PT
Sbjct: 570 YTWGMGANGRLGHGSVEDKKKPT 592



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 139/285 (48%), Gaps = 22/285 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ A + ++ I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P
Sbjct: 320 LVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGP 378

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V+ V+    H+A  + SG++FT GD +    GH D    +  P+ VEAL G    
Sbjct: 379 LEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAM 437

Query: 221 QVTAGL-NFTGFLTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           +V  G+ +    + I G          + T G     +LGHGD   +  P  +  L +  
Sbjct: 438 KVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-H 496

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-V 329
           +  Q+A G S  +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +
Sbjct: 497 NFHQVACGHSMTVALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEI 553

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S G  HV AL S   VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 554 SCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 598



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 141/344 (40%), Gaps = 20/344 (5%)

Query: 116 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 279 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 337

Query: 175 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 338 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 397

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 289
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 398 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 456

Query: 290 V-------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 457 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 514

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G+V+T G    G LG+     K        L + L  ++         L     VY +G 
Sbjct: 515 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGM 574

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              G LG    G  +   +P ++D+L+  HV  IS G   T  +
Sbjct: 575 GANGRLG---HGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 615



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 17/297 (5%)

Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
           +V     +S++ C   D       P+ +E+   +  +Q+  G    G  T +G V T G 
Sbjct: 246 EVLPSEGSSNYLCSKTD----FLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGE 301

Query: 244 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-- 301
              G+LGHG   D   PK +  L  V +V  IA G  +   VT +G +Y +G GS     
Sbjct: 302 ELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGL 360

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGHG       P+ + +   +G+ V+ V+ G  H     SSG ++T+G G  G+LGHGD 
Sbjct: 361 LGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR 419

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG--------SVYGFGWMGFGSLGFPDR 413
                P+ + +L    A++V      +  +V+          S   F W G G       
Sbjct: 420 ESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTW-GDGDKNRLGH 478

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
           G  +  L P  + +L  H+  Q++ G   TV +   G +F  G +   QLG+    G
Sbjct: 479 GDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADG 535



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  Y+       V+ S GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 235 GDVYVWGEVWTEVLPSEGSSNYLC----SKTDFLIPKPLES--DVVLDVQQIACGSRHIG 288

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
                G V+TWG+   G LGHG + D   P+ + SL       +   +  T V+  +G +
Sbjct: 289 LTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTASGDL 348

Query: 398 YGFGWMGF--GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           Y +G   +  G LG    GVS   L  R+   L    V  ++ G +H+ +    G+LF F
Sbjct: 349 YDWGDGSYNAGLLGH-GTGVS-HWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTF 406

Query: 456 GDNERAQLGHDTLRGCLEPTEI 477
           GD     LGH        P E+
Sbjct: 407 GDGTFGSLGHGDRESVAYPKEV 428


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 148/314 (47%), Gaps = 24/314 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 223
           V  ++  ENHAA + + G+V+T G  SS   G  D   N     P++VE+L  V  K V 
Sbjct: 264 VQSIACGENHAAIITKQGEVYTWGSYSS---GRLDQKVNVNASCPKMVESLASVHVKAVA 320

Query: 224 AGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPS 280
            G   T  +T+ G +   G   H  G +      ++  P K + P++ + SV +IA G  
Sbjct: 321 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 379

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 339
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 380 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 437

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                      SG ++TWG    G LGH D   K LP  + SL ++  +QV      T V
Sbjct: 438 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVV 497

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  TG V+  G    G LG P    +D      +   L+   V +IS+G  H  V+T  G
Sbjct: 498 LTVTGMVFTIGSSRHGQLGNPK---ADGESICSVEGPLKTEFVREISSGSSHVAVLTMSG 554

Query: 451 RLFGFGDNERAQLG 464
           ++F +G     QLG
Sbjct: 555 KVFTWGKGAEGQLG 568



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 29/285 (10%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 249 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 308

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 315
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 309 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 366

Query: 316 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK 
Sbjct: 367 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKG 420

Query: 376 HLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
                V      T  +V+          +G ++ +G    G LG  DR +    L P  +
Sbjct: 421 SRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK---LLPTCV 477

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
           DSL A+ + Q+S G   TVV+T  G +F  G +   QLG+    G
Sbjct: 478 DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADG 522



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 371 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 429

Query: 226 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 430 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 488

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 333
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 489 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 544

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            HV  L  SG V+TWGKG  G LG GD  +++ P  + +L+
Sbjct: 545 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 585



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 25/234 (10%)

Query: 260 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 314
           PKS+  L  VGS     V  IA G ++   +T  G VY++GS S+  L      +   P+
Sbjct: 249 PKSLPRL--VGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPK 306

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 372
            +++     +HV  V+ G +H  A+  SG ++ WG+G    G +      ++  P     
Sbjct: 307 MVESL--ASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLG 364

Query: 373 LKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
              +++V ++   +  T ++  +G ++ +G   FG LG  D   +  V RP+ ++SL+  
Sbjct: 365 PMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGD---TQGVARPKEVESLKGS 421

Query: 432 HVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
            V  ++ G +HT  + +           G+LF +GD +R +LGH   +  L PT
Sbjct: 422 RVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPT 475



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 22/344 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H  +I+    V++ GS   G L              +   ++ HV  V+    H
Sbjct: 267 IACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCP-KMVESLASVHVKAVAFGSKH 325

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
              +  SG++F  G+ +       D       F  + +  +  +   ++  G   T  +T
Sbjct: 326 TCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT 385

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVT------ 286
             G + T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+       
Sbjct: 386 SSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK--GSRVKSVACGPWHTAAIVEVMSSF 443

Query: 287 -GN---GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            GN   G ++++G      LGH ++  +L P  + +       +++VS G    V L  +
Sbjct: 444 KGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSL--TAYDLIQVSCGTAVTVVLTVT 501

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V+T G    G LG+     +++      LK+    ++ +      VL  +G V+ +G 
Sbjct: 502 GMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              G LG  D         P ++++L    V  +  G   T  +
Sbjct: 562 GAEGQLGLGDYSNRSS---PTLVEALEGRDVESVVCGFNFTAAI 602



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           K + V  ++ G+ H   +   G VYTWG    G L     ++ + P+ + SL S     V
Sbjct: 260 KMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAV 319

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 440
               + T  +  +G ++ +G  G  SLG  +         P + L  +    VS+I+ G 
Sbjct: 320 AFGSKHTCAITVSGELFEWG-EGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGE 378

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +HT ++T  G+LF +GD     LGH   +G   P E+
Sbjct: 379 WHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEV 415



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 190
           VF+ GSS  G LG+     +  S   +  P     V ++S+  +H A +  SG+VFT G 
Sbjct: 504 VFTIGSSRHGQLGNPKADGE--SICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 191 NSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
            +    G  D +NR    P LVEAL+G   + V  G NFT  + +
Sbjct: 562 GAEGQLGLGDYSNRS--SPTLVEALEGRDVESVVCGFNFTAAICL 604


>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60462899|gb|EAL61096.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 455

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 34/310 (10%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  GR  TL+++ +  V   G +  G LG G +T    + T +   +  H++ +    +
Sbjct: 145 KVIGGRSFTLVLTRDGKVLGFGENNFGQLGLG-DTRNRTAPTPVETLNNQHIIDIGVGLD 203

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGH--------------------------RDTNRPIFR- 207
           H+  V ++G VF  G N     G                           R+   P    
Sbjct: 204 HSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEY 263

Query: 208 --PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPT-PKSI 263
             P LV  L+ +    V  G + T  L+ RG+V++ GSN  G LG G  L  R T P  I
Sbjct: 264 TLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKI 323

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRK 322
              E    + Q+++G S+ L +T  G VYS G G+   LG G +  +   P  ++ F + 
Sbjct: 324 KFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQN 383

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
            I +V+V+AG  H +ALD  G VYTWG G  G LGHG+E D+ LP+ ++       + + 
Sbjct: 384 KIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNESDENLPKQINFFSHSNVIDIF 443

Query: 383 ARKRKTFVLV 392
           A    + VL+
Sbjct: 444 AGIDNSLVLI 453



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 135/321 (42%), Gaps = 46/321 (14%)

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
           S +V+  G N S   G+       +R P  ++ LK    ++V  G +FT  LT  G V  
Sbjct: 108 SNKVYMWGTNKS---GNMSLPSEQYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLG 164

Query: 241 CGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            G N  GQLG GDT +R  P    P+E + +  ++ I  G  + +AVT  G V+ +G   
Sbjct: 165 FGENNFGQLGLGDTRNRTAP---TPVETLNNQHIIDIGVGLDHSIAVTKAGHVFGWGYNV 221

Query: 299 NFCLGH-----------------------GEQHDELQPRAIQTFRR--KGIHVVRVSA-- 331
              +G                        G   +++ P    T      G+  +++S   
Sbjct: 222 EGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVF 281

Query: 332 -GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS---SLKSHLAVQVCARKRK 387
            G +    L + G VY++G    G LG G E+   + +P     +  +    Q+ +    
Sbjct: 282 CGYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASH 341

Query: 388 TFVLVDTGSVYGFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVS--QISTGLYHTV 444
           T  L   G+VY  GW   G LG   D    D    P +L     + +   +++ G  H++
Sbjct: 342 TLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDS---PTLLKYFNQNKIKIVKVAAGGSHSM 398

Query: 445 VVTDRGRLFGFGDNERAQLGH 465
            + D+GR++ +G+    +LGH
Sbjct: 399 ALDDQGRVYTWGNGSNGKLGH 419



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 38/268 (14%)

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           TI   V+  G+N  G +       R  P +I  L+    V ++  G S+ L +T +G V 
Sbjct: 106 TISNKVYMWGTNKSGNMSLPSEQYR-FPTTIDLLKNT-FVEKVIGGRSFTLVLTRDGKVL 163

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            FG  +   LG G+  +   P  ++T   +  H++ +  G +H +A+  +G+V+ WG   
Sbjct: 164 GFGENNFGQLGLGDTRNRTAPTPVETLNNQ--HIIDIGVGLDHSIAVTKAGHVFGWGYNV 221

Query: 353 CGALGH----------------GDE--------------IDKTLPEPLSSLKSHLAVQVC 382
            G +G                 G+E              ++ TLP  +  L+      V 
Sbjct: 222 EGQIGQKVVEYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVF 281

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGLY 441
                TF+L   G+VY FG    G+LG     +  +V +P +I  +     + Q+S+G  
Sbjct: 282 CGYDSTFLLSARGNVYSFGSNEIGTLGLGSE-LKGRVTKPTKIKFTETNEKIKQLSSGAS 340

Query: 442 HTVVVTDRGRLF--GFGDNERAQLGHDT 467
           HT+ +T  G ++  G+G   R  LG DT
Sbjct: 341 HTLFLTSGGNVYSCGWGTEGRLGLGMDT 368



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 14/206 (6%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPR---------AIQTFRRKGIHVVRVSAGDEHVVALDS 341
           ++SFGS  N  LG    +D+L P           I+ F    ++   ++  +++      
Sbjct: 49  LFSFGSFDNLKLGVPGNNDKLIPTQITHLPPFLKIKQFGSSWLNSFLLTD-EQNENDPTI 107

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           S  VY WG    G +    E     P  +  LK+    +V   +  T VL   G V GFG
Sbjct: 108 SNKVYMWGTNKSGNMSLPSE-QYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGFG 166

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
              FG LG  D   +     P  +++L   H+  I  GL H++ VT  G +FG+G N   
Sbjct: 167 ENNFGQLGLGD---TRNRTAPTPVETLNNQHIIDIGVGLDHSIAVTKAGHVFGWGYNVEG 223

Query: 462 QLGHDTLRGCLEPTEIFIQEMEEDTG 487
           Q+G   +      +   + + EE+ G
Sbjct: 224 QIGQKVVEYTRMNSTTEVMDGEEEGG 249



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 129/328 (39%), Gaps = 45/328 (13%)

Query: 156 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           T I+      V +V    +    + + G+V   G+N+    G  DT R    P  VE L 
Sbjct: 133 TTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGFGENNFGQLGLGDT-RNRTAPTPVETLN 191

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG----------------------- 252
                 +  GL+ +  +T  GHV   G N  GQ+G                         
Sbjct: 192 NQHIIDIGVGLDHSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNSTTEVMDGEEEGGAG 251

Query: 253 -------DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
                    ++   P  +  LE++  +  +  G      ++  G VYSFGS     LG G
Sbjct: 252 SLREQMIPDVEYTLPTLVPGLEQI-KISNVFCGYDSTFLLSARGNVYSFGSNEIGTLGLG 310

Query: 306 EQHDELQPRAIQ----TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-D 360
               EL+ R  +     F      + ++S+G  H + L S G VY+ G G  G LG G D
Sbjct: 311 S---ELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTSGGNVYSCGWGTEGRLGLGMD 367

Query: 361 EIDKTLPEPLSSLKSH--LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
             ++  P  L     +    V+V A    +  L D G VY +G    G LG  +   SD+
Sbjct: 368 TSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQGRVYTWGNGSNGKLGHGNE--SDE 425

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVV 446
            L P+ ++     +V  I  G+ +++V+
Sbjct: 426 NL-PKQINFFSHSNVIDIFAGIDNSLVL 452


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 154/365 (42%), Gaps = 31/365 (8%)

Query: 97  LQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG------PETT 150
           L       DIV  +AGN++         +L +   V+SCG +  G  G G      PE  
Sbjct: 37  LSQTSRGKDIVGVTAGNELT-------AVLTNTGEVYSCGYNSEGQCGIGEIDETVPEMV 89

Query: 151 QCVSFTRINFPS-----AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 205
             ++   +  PS        +V       H   V + G++ TCG N+S   GH +  +  
Sbjct: 90  PSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRNNSGQLGHGEVGKGY 149

Query: 206 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
             PR V    G    +V    + T  +T      T G N +GQLGHGD   R  P ++A 
Sbjct: 150 SLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALAC 209

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG--HGE-QHDELQPRAIQTFRRK 322
            + +G V+ +A G  + +    +G +YSFG   +  LG   GE +   +Q RA  +    
Sbjct: 210 FQGLG-VLSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGESRFTPVQHRACTSV--- 265

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
              V +++ G  H VAL  +G V  +G+   G LG G          +  L     +QV 
Sbjct: 266 ---VEQLACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVA 322

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                T  L D G VY FG    G LG    G  +   RP  ++ L    V Q++ G YH
Sbjct: 323 CGSYHTISLDDEGRVYPFGRNNHGQLG---TGTREDACRPCFVEGLSQSFVCQVAAGFYH 379

Query: 443 TVVVT 447
           T+ +T
Sbjct: 380 TLCLT 384



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 155/357 (43%), Gaps = 24/357 (6%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           ++  G + CG LG G +T +  + T         +V V+A     A +  +G+V++CG N
Sbjct: 13  LYGFGQNACGELGLG-DTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYN 71

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGV--------PCKQVT-----AGLNFTGFLTIRGHV 238
           S   CG  + +  +  P +V +L  V        P  +V+      G      +T  G +
Sbjct: 72  SEGQCGIGEIDETV--PEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGEL 129

Query: 239 HTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
            TCG N  GQLGHG+       P+ +A       V ++A   S+ + VT +   ++FG  
Sbjct: 130 QTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGY-RVTKVACSYSHTVVVTDDDRTWTFGGN 188

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
               LGHG+      P A+  F  +G+ V+ V+ G  H V   +SG +Y++GK   G LG
Sbjct: 189 GYGQLGHGDHSSRSAPAALACF--QGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLG 246

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
                 +  P    +  S +    C     T  L   G V  FG   +G LG   R   +
Sbjct: 247 LEGGESRFTPVQHRACTSVVEQLACGYYH-TVALSRAGEVVAFGRNDYGQLGLGHR---E 302

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
              +   +  L    + Q++ G YHT+ + D GR++ FG N   QLG  T      P
Sbjct: 303 STWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRP 359



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 13/191 (6%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVV-QVSA 171
           + +  G YHT++ +++  ++S G +  G LG  G E+     FT +   +   VV Q++ 
Sbjct: 216 LSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGES----RFTPVQHRACTSVVEQLAC 271

Query: 172 SENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
              H   + ++G+V   G N       GHR++    ++   V  L G+   QV  G   T
Sbjct: 272 GYYHTVALSRAGEVVAFGRNDYGQLGLGHREST---WQGGQVPDLAGLRIIQVACGSYHT 328

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             L   G V+  G N HGQLG G   D   P  +  L +   V Q+AAG  + L +TG  
Sbjct: 329 ISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQ-SFVCQVAAGFYHTLCLTGPP 387

Query: 290 VVYSFGSGSNF 300
           +    G GS F
Sbjct: 388 LERKAGHGSAF 398


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 161/339 (47%), Gaps = 22/339 (6%)

Query: 116  QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I +N +V +CG    G LG G      V  T I+      V Q+     
Sbjct: 4030 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4088

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            S+ H+  + +SG+VF+ GD      GH +++R   RP      +G    Q++ G   +  
Sbjct: 4089 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPX-----QGEEVVQMSCGFKHSAV 4142

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G+T ++  P+ +  LE  ++G   Q+A G ++ LAV+ +G
Sbjct: 4143 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4199

Query: 290  -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
             +V++FG G    LG G    +  P+ I      GI + +V+ G +  VAL   G+VYT+
Sbjct: 4200 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4257

Query: 349  GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G+     L  G   +   P+ +  L   +   V      T  L   G VY +G    G L
Sbjct: 4258 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4317

Query: 409  GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
            G    G ++ V  P ++  L+  +V QIS G  H+   T
Sbjct: 4318 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4353



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 130/284 (45%), Gaps = 19/284 (6%)

Query: 199  RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 258
            R+   P   P   +A      +QV  G N T  +   G V  CG  ++G+LG G++ D  
Sbjct: 4014 RNVMVPAAAPSFSQA------QQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLH 4067

Query: 259  TPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 316
                I+ L+   V  +V       + +A+T +G V+S+G G    LGHG    + +P   
Sbjct: 4068 VLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX-- 4125

Query: 317  QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
                 +G  VV++S G +H   + S G ++T+G G  G LG G+  +K LPE +++L+ +
Sbjct: 4126 -----QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGY 4180

Query: 377  LAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV C       V  D   V+ FG   +G LG    G S     P+ +D L    + +
Sbjct: 4181 QIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGL---GNSTAKSSPQKIDVLCGIGIKK 4237

Query: 436  ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
            ++ G   +V +T  G ++ FG +    L     R    P +I +
Sbjct: 4238 VACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPV 4281



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 18/320 (5%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   QV   +N   FV+Q+ G V  CG+ S    G  +++  +    ++ AL+G   
Sbjct: 4023 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4080

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P       +   VVQ++
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX------QGEEVVQMS 4134

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   VT +G +++FG+G    LG G   ++  P  +     +G  + +V+ G  H 
Sbjct: 4135 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4192

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+ +G G  G LG G+   K+ P+ +  L      +V    + +  L   G
Sbjct: 4193 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4252

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             VY FG      +G P+ G +    RP+ +  L    +  ++ G  HT+ +   G ++ +
Sbjct: 4253 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4309

Query: 456  GDNERAQLGHDTLRGCLEPT 475
            G N   QLG        EPT
Sbjct: 4310 GSNSEGQLGLGHTNHVREPT 4329



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 3998 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4054

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL---YHTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 4055 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4111

Query: 462  QLGH 465
            +LGH
Sbjct: 4112 KLGH 4115


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 148/314 (47%), Gaps = 24/314 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 223
           V  ++  ENHAA + + G+V+T G  SS   G  D   N     P++VE+L  V  K V 
Sbjct: 265 VQSIACGENHAAIITKQGEVYTWGSYSS---GRLDQKVNVNASCPKMVESLASVHVKAVA 321

Query: 224 AGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPS 280
            G   T  +T+ G +   G   H  G +      ++  P K + P++ + SV +IA G  
Sbjct: 322 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 380

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 339
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 381 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 438

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                      SG ++TWG    G LGH D   K LP  + SL ++  +QV      T V
Sbjct: 439 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVV 498

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  TG V+  G    G LG P    +D      +   L+   V +IS+G  H  V+T  G
Sbjct: 499 LTVTGMVFTIGSSRHGQLGNPK---ADGESICSVEGPLKTEFVREISSGSSHVAVLTMSG 555

Query: 451 RLFGFGDNERAQLG 464
           ++F +G     QLG
Sbjct: 556 KVFTWGKGAEGQLG 569



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 29/285 (10%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 250 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 309

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 315
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 310 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 367

Query: 316 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK 
Sbjct: 368 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKG 421

Query: 376 HLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
                V      T  +V+          +G ++ +G    G LG  DR +    L P  +
Sbjct: 422 SRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK---LLPTCV 478

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
           DSL A+ + Q+S G   TVV+T  G +F  G +   QLG+    G
Sbjct: 479 DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADG 523



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 372 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 430

Query: 226 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 431 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 489

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 333
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 490 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 545

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            HV  L  SG V+TWGKG  G LG GD  +++ P  + +L+
Sbjct: 546 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 586



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 25/234 (10%)

Query: 260 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 314
           PKS+  L  VGS     V  IA G ++   +T  G VY++GS S+  L      +   P+
Sbjct: 250 PKSLPRL--VGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPK 307

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 372
            +++     +HV  V+ G +H  A+  SG ++ WG+G    G +      ++  P     
Sbjct: 308 MVESL--ASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLG 365

Query: 373 LKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
              +++V ++   +  T ++  +G ++ +G   FG LG  D   +  V RP+ ++SL+  
Sbjct: 366 PMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGD---TQGVARPKEVESLKGS 422

Query: 432 HVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
            V  ++ G +HT  + +           G+LF +GD +R +LGH   +  L PT
Sbjct: 423 RVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPT 476



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 22/344 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H  +I+    V++ GS   G L              +   ++ HV  V+    H
Sbjct: 268 IACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCP-KMVESLASVHVKAVAFGSKH 326

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
              +  SG++F  G+ +       D       F  + +  +  +   ++  G   T  +T
Sbjct: 327 TCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT 386

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVT------ 286
             G + T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+       
Sbjct: 387 SSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK--GSRVKSVACGPWHTAAIVEVMSSF 444

Query: 287 -GN---GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            GN   G ++++G      LGH ++  +L P  + +       +++VS G    V L  +
Sbjct: 445 KGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSL--TAYDLIQVSCGTAVTVVLTVT 502

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V+T G    G LG+     +++      LK+    ++ +      VL  +G V+ +G 
Sbjct: 503 GMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 562

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              G LG  D         P ++++L    V  +  G   T  +
Sbjct: 563 GAEGQLGLGDYSNRSS---PTLVEALEGRDVESVVCGFNFTAAI 603



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           K + V  ++ G+ H   +   G VYTWG    G L     ++ + P+ + SL S     V
Sbjct: 261 KMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAV 320

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 440
               + T  +  +G ++ +G  G  SLG  +         P + L  +    VS+I+ G 
Sbjct: 321 AFGSKHTCAITVSGELFEWG-EGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGE 379

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +HT ++T  G+LF +GD     LGH   +G   P E+
Sbjct: 380 WHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEV 416



 Score = 42.7 bits (99), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 190
           VF+ GSS  G LG+     +  S   +  P     V ++S+  +H A +  SG+VFT G 
Sbjct: 505 VFTIGSSRHGQLGNPKADGE--SICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 562

Query: 191 NSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
            +    G  D +NR    P LVEAL+G   + V  G NFT  + +
Sbjct: 563 GAEGQLGLGDYSNRS--SPTLVEALEGRDVESVVCGFNFTAAICL 605


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 146/323 (45%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G
Sbjct: 263 VQQIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACG 321

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  + 
Sbjct: 322 EFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHS 380

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
                +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+   
Sbjct: 381 ALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEI 438

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                    S  ++TWG G    LGHGD+  K +P  + +L  H   QV      T  L 
Sbjct: 439 SGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALA 498

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G    G LG P    +D      + D L    V +IS G  H   +T R  +
Sbjct: 499 TSGHVFTMGSSNNGQLGNPK---ADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEV 555

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH ++    +PT
Sbjct: 556 YTWGMGANGRLGHGSVEDKKKPT 578



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 139/285 (48%), Gaps = 22/285 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ A + ++ I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P
Sbjct: 306 LVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGP 364

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V+ V+    H+A  + SG++FT GD +    GH D    +  P+ VEAL G    
Sbjct: 365 LEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAM 423

Query: 221 QVTAGL-NFTGFLTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           +V  G+ +    + I G          + T G     +LGHGD   +  P  +  L +  
Sbjct: 424 KVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-H 482

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-V 329
           +  Q+A G S  +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +
Sbjct: 483 NFHQVACGHSMTVALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEI 539

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S G  HV AL S   VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 540 SCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 584



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 141/344 (40%), Gaps = 20/344 (5%)

Query: 116 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 265 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 323

Query: 175 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 324 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 383

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 289
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 384 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 442

Query: 290 V-------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 443 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 500

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G+V+T G    G LG+     K        L + L  ++         L     VY +G 
Sbjct: 501 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGM 560

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              G LG    G  +   +P ++D+L+  HV  IS G   T  +
Sbjct: 561 GANGRLG---HGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCI 601



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 139/314 (44%), Gaps = 20/314 (6%)

Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
           +V     +S++ C   D       P+ +E+   +  +Q+  G    G  T +G V T G 
Sbjct: 232 EVLPSEGSSNYLCSKTD----FLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGE 287

Query: 244 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-- 301
              G+LGHG   D   PK +  L  V +V  IA G  +   VT +G +Y +G GS     
Sbjct: 288 ELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGL 346

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGHG       P+ + +   +G+ V+ V+ G  H     SSG ++T+G G  G+LGHGD 
Sbjct: 347 LGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDR 405

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG--------SVYGFGWMGFGSLGFPDR 413
                P+ + +L    A++V      +  +V+          S   F W G G       
Sbjct: 406 ESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTW-GDGDKNRLGH 464

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRG 470
           G  +  L P  + +L  H+  Q++ G   TV +   G +F  G +   QLG+   D  + 
Sbjct: 465 GDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQP 524

Query: 471 CLEPTEIFIQEMEE 484
           C+   ++  + +EE
Sbjct: 525 CMVQDKLGNELVEE 538



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  Y+       V+ S GS +  C     + D L P+ +++     + V +++ G  H+ 
Sbjct: 221 GDVYVWGEVWTEVLPSEGSSNYLC----SKTDFLIPKPLES--DVVLDVQQIACGSRHIG 274

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
                G V+TWG+   G LGHG + D   P+ + SL       +   +  T V+  +G +
Sbjct: 275 LTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTASGDL 334

Query: 398 YGFGWMGF--GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           Y +G   +  G LG    GVS   L  R+   L    V  ++ G +H+ +    G+LF F
Sbjct: 335 YDWGDGSYNAGLLGH-GTGVS-HWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTF 392

Query: 456 GDNERAQLGHDTLRGCLEPTEI 477
           GD     LGH        P E+
Sbjct: 393 GDGTFGSLGHGDRESVAYPKEV 414


>gi|408681154|ref|YP_006880981.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
 gi|328885483|emb|CCA58722.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
          Length = 394

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 20/289 (6%)

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG-H 237
           +L+ G V + G+N++   G+  T    F P  V AL GV   +V+AGLN    L ++G  
Sbjct: 90  LLKDGTVKSWGNNTTGQLGNGTTTAQPF-PATVAALSGV--SEVSAGLNHA--LAVKGGR 144

Query: 238 VHTCGSNTHGQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
           V   G+N   QLG G   D  TP K+  P++ +  V  + AG  + +A+  +G V+++G 
Sbjct: 145 VLAWGNNASKQLGTGQ--DTTTPYKAPIPVQSLDKVKDVGAGCDFSVALRQDGTVWTWGK 202

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           G N  LG G       P+ +         V  V+ G EHV+AL + G V  WGKG  G L
Sbjct: 203 GDNGRLGTGNNTTRETPQKVPDL----ADVESVAVGCEHVLALTADGVVKAWGKGAEGQL 258

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           G+    D + P  ++ L +     V A     F ++D GSV G+G      LG    G +
Sbjct: 259 GNDSTADSSRPVDVAHLDA--VATVFATSASGFAVLDDGSVAGWGKNAERQLG---DGTN 313

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
                P +LD L+   V  I+ G   T+   D G + G+G N  AQLG 
Sbjct: 314 ANRTTPVVLDHLKG--VQSIAGGADFTLAALDDGSVIGWGANAAAQLGD 360



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 102/249 (40%), Gaps = 21/249 (8%)

Query: 116 QITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +++ G  H L +    V + G++    LG G +TT       I   S   V  V A  + 
Sbjct: 129 EVSAGLNHALAVKGGRVLAWGNNASKQLGTGQDTTTPYK-APIPVQSLDKVKDVGAGCDF 187

Query: 176 AAFVLQSGQVFTC--GDNSSFCCGHRDTNR-PIFRPRL--VEALKGVPCKQVTAGLNFTG 230
           +  + Q G V+T   GDN     G+  T   P   P L  VE++  V C+ V A      
Sbjct: 188 SVALRQDGTVWTWGKGDNGRLGTGNNTTRETPQKVPDLADVESVA-VGCEHVLA------ 240

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            LT  G V   G    GQLG+  T D   P  +A L+ V +V   +A      AV  +G 
Sbjct: 241 -LTADGVVKAWGKGAEGQLGNDSTADSSRPVDVAHLDAVATVFATSA---SGFAVLDDGS 296

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V  +G  +   LG G   +   P  +     KG+  +   A D  + ALD  G V  WG 
Sbjct: 297 VAGWGKNAERQLGDGTNANRTTPVVLDHL--KGVQSIAGGA-DFTLAALD-DGSVIGWGA 352

Query: 351 GYCGALGHG 359
                LG G
Sbjct: 353 NAAAQLGDG 361



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 100/250 (40%), Gaps = 23/250 (9%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-------EVGSVVQIAAGPSYMLAVTGNGV 290
           V   G N  GQLG+G TL + TP ++A +          G     AA   + +A+  +G 
Sbjct: 36  VRAWGENAQGQLGNGSTLAQQTPAAVAGITRDDVRELSGGGGGAAAAANGFAVALLKDGT 95

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V S+G+ +   LG+G    +  P  +         V  VSAG  H +A+   G V  WG 
Sbjct: 96  VKSWGNNTTGQLGNGTTTAQPFPATVAALS----GVSEVSAGLNHALAV-KGGRVLAWGN 150

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
                LG G +       P+          V A    +  L   G+V+ +G    G LG 
Sbjct: 151 NASKQLGTGQDTTTPYKAPIPVQSLDKVKDVGAGCDFSVALRQDGTVWTWGKGDNGRLGT 210

Query: 411 PD---RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
            +   R    KV  P + D      V  ++ G  H + +T  G +  +G     QLG+D+
Sbjct: 211 GNNTTRETPQKV--PDLAD------VESVAVGCEHVLALTADGVVKAWGKGAEGQLGNDS 262

Query: 468 LRGCLEPTEI 477
                 P ++
Sbjct: 263 TADSSRPVDV 272


>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
 gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
          Length = 710

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 33/344 (9%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPET---TQCVSF--TRINFPSAAHVVQV 169
            +  G  H+L L S  +V + G++  GVLG+G +T    Q  S+    ++ P+   V  V
Sbjct: 102 DVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGTTVTSV 161

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           +AS  ++  +  +G V   G+N     G+  TN   + P  +          + A  N  
Sbjct: 162 AASSTYSLALTATGTVLAWGNNDQGQLGN-GTNTDSYLPVPLALPAATTITAIAAATNHG 220

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT  G V   GSN  GQLG+G+T +  TP ++A L    ++  IAA  S+ +A+T  G
Sbjct: 221 LALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVA-LPAGTTITAIAAAGSHSMALTSTG 279

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V ++G             D + P  I      GI +  V++G++H +AL S+G V+TWG
Sbjct: 280 TVLTWG------------QDTVLP--IPIVFPAGITITAVASGNDHSLALTSTGKVFTWG 325

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             Y G+LG+G   + ++P P S         +     ++  L  TG +  +G   +G +G
Sbjct: 326 ANYFGSLGNGTFANSSVPVPASVPTDTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQVG 385

Query: 410 -------FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
                  +P  GVS  V      D+     ++ ++ G YH++ V
Sbjct: 386 NGTRTGSWPGMGVSVPVPVSLAADT----KITTMAGGYYHSLAV 425



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 142/340 (41%), Gaps = 30/340 (8%)

Query: 141 GVLGHGPET-TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH- 198
           G LG G  T    +S  R++ P+   +  V+A   H+  +  +G V   G N     G+ 
Sbjct: 74  GALGVGTATLDDKLSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNG 133

Query: 199 ----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
                      + P  V    G     V A   ++  LT  G V   G+N  GQLG+G  
Sbjct: 134 TKTDNSAQNDSYVPAAVHLPAGTTVTSVAASSTYSLALTATGTVLAWGNNDQGQLGNGTN 193

Query: 255 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 314
            D   P  +A L    ++  IAA  ++ LA+T NG V ++GS  +  LG+G   +   P 
Sbjct: 194 TDSYLPVPLA-LPAATTITAIAAATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTP- 251

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            +      G  +  ++A   H +AL S+G V TWG+            D  LP P+    
Sbjct: 252 -VTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQ------------DTVLPIPIVFPA 298

Query: 375 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSLRAH 431
                 V +    +  L  TG V+ +G   FGSLG   F +  V      P   D+    
Sbjct: 299 GITITAVASGNDHSLALTSTGKVFTWGANYFGSLGNGTFANSSVPVPASVPT--DT---- 352

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
            ++ I+ G   ++ +T  G+L  +G N   Q+G+ T  G 
Sbjct: 353 TITAIAGGNAQSLALTSTGKLLAWGRNNYGQVGNGTRTGS 392



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 114/289 (39%), Gaps = 22/289 (7%)

Query: 206 FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK-SIA 264
             P  V    G     V AG   +  LT  G V   G+N +G LG+G   D      S  
Sbjct: 87  LSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYV 146

Query: 265 P----LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
           P    L    +V  +AA  +Y LA+T  G V ++G+     LG+G   D   P  +    
Sbjct: 147 PAAVHLPAGTTVTSVAASSTYSLALTATGTVLAWGNNDQGQLGNGTNTDSYLP--VPLAL 204

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
                +  ++A   H +AL S+G V  WG    G LG+G+  +   P  ++         
Sbjct: 205 PAATTITAIAAATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVALPAGTTITA 264

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
           + A    +  L  TG+V  +G               D VL P  +       ++ +++G 
Sbjct: 265 IAAAGSHSMALTSTGTVLTWG--------------QDTVL-PIPIVFPAGITITAVASGN 309

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
            H++ +T  G++F +G N    LG+ T      P    +      T +A
Sbjct: 310 DHSLALTSTGKVFTWGANYFGSLGNGTFANSSVPVPASVPTDTTITAIA 358



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 89/231 (38%), Gaps = 13/231 (5%)

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
           PL  +      A  PS   A TG G+ +         +G     D+L P  ++     G 
Sbjct: 43  PLPTLAQHAAAATPPSG--AATGIGLAWGRDGYGALGVGTATLDDKLSP--VRVHLPTGT 98

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT------LPEPLSSLKSHLA 378
            +  V+AG  H +AL S+G V  WG  Y G LG+G + D +      +P  +        
Sbjct: 99  TISDVAAGAVHSLALTSTGTVLAWGTNYYGVLGNGTKTDNSAQNDSYVPAAVHLPAGTTV 158

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
             V A    +  L  TG+V  +G    G LG    G +     P  L    A  ++ I+ 
Sbjct: 159 TSVAASSTYSLALTATGTVLAWGNNDQGQLG---NGTNTDSYLPVPLALPAATTITAIAA 215

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
              H + +T  G +  +G N   QLG+        P  + +      T +A
Sbjct: 216 ATNHGLALTSNGTVLAWGSNGSGQLGNGNTTNSNTPVTVALPAGTTITAIA 266


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 147/321 (45%), Gaps = 11/321 (3%)

Query: 161  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
            PS +   QV   +N  +F++QS  V T      +    +  +  ++ P ++ A +G    
Sbjct: 3047 PSLSQTQQVVCGQN-CSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVT 3105

Query: 221  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
            Q+       G    LT  G V + G    G+LGHG+   +  PK I  L+    VVQ+A 
Sbjct: 3106 QLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQG-EDVVQLAC 3164

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
            G  +   VT +G +++FGSG +  LG     +++ P  +     +G HV +VS G  H +
Sbjct: 3165 GFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERVAAL--EGYHVGQVSCGLNHTL 3222

Query: 338  ALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
             L   G  V+ +G G  G LG G    K  P+ +  L +    +VC   + + V+   G 
Sbjct: 3223 VLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGH 3282

Query: 397  VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            VY FG      +G PD  + ++   P+++ SL    +  I+ G  H + ++  G ++ +G
Sbjct: 3283 VYTFGQERL--IGLPDSMLKNRS-NPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWG 3339

Query: 457  DNERAQLGHDTLRGCLEPTEI 477
             N   QLG        EPT I
Sbjct: 3340 CNSEGQLGLGHCNPVKEPTLI 3360



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 129/274 (47%), Gaps = 10/274 (3%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+  G NSS       T   I  P+L +       + + AG   T  ++  G V  CG  
Sbjct: 383 VYVWGSNSSHQLAE-GTLEKILLPKLTQGFSDA--QTIEAGQYCTFSVSTDGSVKACGKG 439

Query: 245 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
           ++G+LG GD+ ++  PK +   P   +  V        + LA+T +G V+S+G G    L
Sbjct: 440 SYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKL 499

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           GHG    +  P+ IQ      I VV  SAG  H  A+   G +YTWG+G  G LGH D  
Sbjct: 500 GHGNSATQKYPKIIQGPLFSKI-VVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQ 558

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            + +P  +  + S +    C       V  D  +V+ FG    G LG    G +++V RP
Sbjct: 559 SRNMPTLVKDI-SGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLG---HGDTNRVYRP 614

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           +++++L    + ++  G   ++ +T  G++F +G
Sbjct: 615 KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG 648



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 149/342 (43%), Gaps = 18/342 (5%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 173
           I  G+Y T  +S + SV +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 417 IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSD 476

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFL 232
            H   +   G+VF+ GD      GH ++    + P++++  L        +AG   +  +
Sbjct: 477 GHTLAITVDGEVFSWGDGEYGKLGHGNSATQKY-PKIIQGPLFSKIVVSASAGYRHSAAV 535

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 291
           T  G ++T G    G+LGH D+  R  P  +  +  VG   Q+A G S+ +AV  +G  V
Sbjct: 536 TKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVG---QVACGSSHTIAVAQDGRTV 592

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 593 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 650

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
            C   G   E     P  +  L     + +         L     VY +G    G  G  
Sbjct: 651 SCLGCG-SSETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCG-- 707

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYH----TVVVTDR 449
               S  + RP+ +  L    + QI+ G  H    T V TDR
Sbjct: 708 QGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDR 749



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 165/374 (44%), Gaps = 19/374 (5%)

Query: 110  SAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHV 166
            S     Q+  G+  + LI SN  V + G    G LG G      V      F       +
Sbjct: 3048 SLSQTQQVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQL 3107

Query: 167  VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
            V    S+ H+  + ++G+VF+ GD      GH +  R   RP+ +EAL+G    Q+  G 
Sbjct: 3108 VTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQ-RRPKQIEALQGEDVVQLACGF 3166

Query: 227  NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
              +  +T  G + T GS   G+LG   T ++  P+ +A LE    V Q++ G ++ L ++
Sbjct: 3167 RHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEGY-HVGQVSCGLNHTLVLS 3225

Query: 287  GNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             +G+ V++FG G    LG G    +  P+ ++    KG+  V   A    VVA D  G+V
Sbjct: 3226 LDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACD--GHV 3283

Query: 346  YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
            YT+G+     L      +++ P+ + SL+      +         L  TG VY +G    
Sbjct: 3284 YTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSE 3343

Query: 406  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG- 464
            G LG    G  + V  P ++ +L+  ++ QIS G  H+   T        G     QLG 
Sbjct: 3344 GQLGL---GHCNPVKEPTLITALQGKNIKQISAGRCHSSAWTTPSTSKNSGGPGNLQLGL 3400

Query: 465  -------HDTLRGC 471
                   ++TL+ C
Sbjct: 3401 PQSVPPQYNTLKDC 3414



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 117/233 (50%), Gaps = 11/233 (4%)

Query: 235  RGHVHTCGSNTHGQL-GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            +  V+  G+  +GQL G G  L  PT   +AP   +    Q+  G +    +  NGVV +
Sbjct: 3019 KSDVYLWGNGRYGQLAGTGTNLTVPT---LAP--SLSQTQQVVCGQNCSFLIQSNGVVTA 3073

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGY 352
             G G    LG G   D   P  I  F+   +  +  S G D H +AL  +G V++WG G 
Sbjct: 3074 VGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGD 3133

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+   +  P+ + +L+    VQ+    R + V+   G ++ FG    G LG   
Sbjct: 3134 FGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLG--Q 3191

Query: 413  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 464
            R  S+K+L  R+  +L  +HV Q+S GL HT+V++ D   ++ FGD +  +LG
Sbjct: 3192 RSTSNKMLPERVA-ALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLG 3243



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 132/291 (45%), Gaps = 21/291 (7%)

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGHV 238
           G V  CG  S    G  D+N      +LV      +K V   + + G   T  +T+ G V
Sbjct: 431 GSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDG--HTLAITVDGEV 488

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHG++  +  PK I        VV  +AG  +  AVT +G +Y++G G 
Sbjct: 489 FSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGD 548

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGKGYCGALG 357
              LGH +     Q R + T  +    V +V+ G  H +A+   G  V+++G G  G LG
Sbjct: 549 FGRLGHSDS----QSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLG 604

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW---MGFGSLGFPDRG 414
           HGD      P+ + +L   +  +VCA  + +  L   G V+ +G    +G GS       
Sbjct: 605 HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGS------- 657

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
                LRPR ++ L    +  IS G  H + ++    ++ +G+N   Q G 
Sbjct: 658 SETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQ 708



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 132/329 (40%), Gaps = 49/329 (14%)

Query: 116 QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           Q+  G  HT+ ++    +V+S G    G LGHG +T +      I       + +V A  
Sbjct: 574 QVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHG-DTNRVYRPKVIEALHGFIIRKVCAGS 632

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  +  +GQVF  G  S   CG  +T     RPR VE L       ++ G +    L+
Sbjct: 633 QSSLALTSAGQVFAWGCGSCLGCGSSETTS--LRPRFVEDLSITKIIDISCGDSHCLALS 690

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
               V+  G+NT GQ G G T    T PK +  LE V S+ QI AG S+ LA T      
Sbjct: 691 HENEVYAWGNNTMGQCGQGHTSTPITRPKKVLGLEGV-SIQQITAGTSHSLAWT------ 743

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY--TWGK 350
                                 A+ T R+       V+      V L+ S + Y   + K
Sbjct: 744 ----------------------AVPTDRQ------LVAWHRPFCVDLEESTFTYLCNFLK 775

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            YC  L      + T P P  S + H    +   K  + V +      G G +  G+ G 
Sbjct: 776 CYCDGLE-----NDTPPTPFLSKRDHQQFILLCMKLLS-VHLSLAHAGGTGALVLGTQGR 829

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTG 439
           P R +  +++   + DS++   ++ +S G
Sbjct: 830 PLRNLLFRLIDSNMPDSIQKAVLNTLSIG 858



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L  G   + T+P    SL      QV   +  +F++   G V   G   
Sbjct: 3022 VYLWGNGRYGQLA-GTGTNLTVPTLAPSLSQ--TQQVVCGQNCSFLIQSNGVVTAVGEGQ 3078

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +  P I+ + + + V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3079 YGRLG---QGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFG 3135

Query: 462  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
            +LGH        P +I   + E+   LA
Sbjct: 3136 KLGHGNNERQRRPKQIEALQGEDVVQLA 3163



 Score = 39.7 bits (91), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 10/125 (8%)

Query: 345 VYTWGKGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           VY WG      L  G      LP   +  S  ++  A Q C     TF +   GSV   G
Sbjct: 383 VYVWGSNSSHQLAEGTLEKILLPKLTQGFSDAQTIEAGQYC-----TFSVSTDGSVKACG 437

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLR-AHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
              +G LG  D   +  + +  +L+  R    VS       HT+ +T  G +F +GD E 
Sbjct: 438 KGSYGRLGLGDSN-NQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEY 496

Query: 461 AQLGH 465
            +LGH
Sbjct: 497 GKLGH 501


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 168/356 (47%), Gaps = 25/356 (7%)

Query: 112 GNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 170
           G  + +  G  H+L   S+ SV++ GS+  G LG G   T   S + +     + VV V+
Sbjct: 396 GGGVAVAAGFNHSLAARSDGSVWAWGSNDSGQLGDG---TTRNSTSPVQVQGLSGVVAVA 452

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           A  +H+  +   G V+  G N+    G    TNR +     V+ L GV    V AG N +
Sbjct: 453 AGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLV----PVQVLSGVVA--VAAGSNHS 506

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             +   G V T GSN +GQLG G T +R  P  +  L  V +V   AAG  + LAV  +G
Sbjct: 507 LAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLSGVAAV---AAGSFHSLAVHSDG 563

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++GS S+  LG G   + L P  +          V V+AG  H + + S G V+TWG
Sbjct: 564 SVWAWGSNSSGELGDGTTSNRLVPGRVPGLSGG----VAVAAGGFHSLVVRSDGTVWTWG 619

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               G LG G    +++P  +  L   +AV   A    +  +   G+V+ +G+  +G LG
Sbjct: 620 SNSFGELGDGTTTSRSVPVQVQGLSGVVAVD--AGNSHSLAVRSDGTVWTWGYNSYGQLG 677

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
               G + +   P  +  L    V  ++TG  H +VV   G ++ +G N   QLG+
Sbjct: 678 ---DGTTTRRSVPVQVPGLSG--VVAMATGALHPLVVRSDGTVWAWGYNSFGQLGN 728



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 162/359 (45%), Gaps = 23/359 (6%)

Query: 120 GRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           G YH+L L S+ SV++ G +  G LG    T++ V    +     +  + V+A  +H+  
Sbjct: 304 GSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVP---VQVRGLSGGMAVTAGSSHSLA 360

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           V   G V+  G N S   G   TN     P  V+ L G     V AG N +      G V
Sbjct: 361 VGSDGTVWAWGSNFSGERGEGTTNNRA-SPVQVQGLGG--GVAVAAGFNHSLAARSDGSV 417

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
              GSN  GQLG G T +  +P  +  L     VV +AAG  + LA+  +G V+++GS +
Sbjct: 418 WAWGSNDSGQLGDGTTRNSTSPVQVQGLS---GVVAVAAGFDHSLALRSDGSVWAWGSNA 474

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
              LG G   + L P  +Q        VV V+AG  H +A+ S G V+TWG    G LG 
Sbjct: 475 YGQLGEGTTTNRLVP--VQVLS----GVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGD 528

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           G   ++ +P  +  L    A  V A    +  +   GSV+ +G    G LG    G +  
Sbjct: 529 GTTSNRLVPVQVQGLSGVAA--VAAGSFHSLAVHSDGSVWAWGSNSSGELG---DGTTSN 583

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            L P  +  L       ++ G +H++VV   G ++ +G N   +LG  T      P ++
Sbjct: 584 RLVPGRVPGLSGGVA--VAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQV 640



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 167/372 (44%), Gaps = 39/372 (10%)

Query: 115 MQITTGRYHTLLISNSSVFSCGSSLCGVL---GHGPETTQCVSFTRINFP--SAAHVVQV 169
           MQ   GR+ + L+             GVL   G G  T +    T    P   A    ++
Sbjct: 1   MQGNAGRWMSRLLG---------VWIGVLMGVGCGLPTDESAEQTSRGAPLRDAPSRARL 51

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           +A  +++  +   G V+  G N     G   T      P  V  L GV    V AG + +
Sbjct: 52  AAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNH-SAPVQVPGLSGVVA--VAAGSSHS 108

Query: 230 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
             L +R  G V   GSN+ GQLG G T  R TP  +  L     VV +AAG SY LAV  
Sbjct: 109 --LAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLS---GVVSVAAGSSYSLAVRS 163

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           +G V+++GS  +  LG G   + L P  +Q     G  VV V+AG  H +A+ S G V+ 
Sbjct: 164 DGTVWAWGSNFSGQLGDGTTSNRLVP--VQVPGLSG--VVSVAAGSSHSLAVLSDGSVWA 219

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    G LG G +I++ +P  +  L     V V A    +  +   G+V+ +G   FG 
Sbjct: 220 WGANSSGQLGDGTKINRLVPVQVPGLSG--VVAVAAGAAHSLAVRSDGTVWTWGANSFGQ 277

Query: 408 LGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           LG  D   SD+++  R+  L  + A  V     G YH++ +   G ++ +G N   QLG 
Sbjct: 278 LG--DGTKSDRLVPVRVQGLSGVVASDV-----GSYHSLALRSDGSVWAWGHNSSGQLGD 330

Query: 466 DTLRGCLEPTEI 477
           D+      P ++
Sbjct: 331 DSSTSRSVPVQV 342



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 164/384 (42%), Gaps = 37/384 (9%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 159
           V+  S +V  +AG+        Y   + S+ +V++ GS+  G LG G  + + V    + 
Sbjct: 142 VQGLSGVVSVAAGSS-------YSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVP---VQ 191

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKG 216
            P  + VV V+A  +H+  VL  G V+  G NSS   G     NR  P+  P L   +  
Sbjct: 192 VPGLSGVVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVPGLSGVVAV 251

Query: 217 VPCKQVTAGLNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
                 +        L +R  G V T G+N+ GQLG G   DR  P  +  L     VV 
Sbjct: 252 AAGAAHS--------LAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLS---GVVA 300

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
              G  + LA+  +G V+++G  S+  LG     D    R++    R     + V+AG  
Sbjct: 301 SDVGSYHSLALRSDGSVWAWGHNSSGQLG----DDSSTSRSVPVQVRGLSGGMAVTAGSS 356

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H +A+ S G V+ WG  + G  G G   ++  P  +  L   +A  V A    +      
Sbjct: 357 HSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQVQGLGGGVA--VAAGFNHSLAARSD 414

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           GSV+ +G    G LG    G +     P  +  L    V  ++ G  H++ +   G ++ 
Sbjct: 415 GSVWAWGSNDSGQLG---DGTTRNSTSPVQVQGLSG--VVAVAAGFDHSLALRSDGSVWA 469

Query: 455 FGDNERAQLGHDTLRGCLEPTEIF 478
           +G N   QLG  T    L P ++ 
Sbjct: 470 WGSNAYGQLGEGTTTNRLVPVQVL 493



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 119/256 (46%), Gaps = 22/256 (8%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L + S+ +V++ GS+L G LG G  + + V    +     + V  V+A  
Sbjct: 497 VAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVP---VQVQGLSGVAAVAAGS 553

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF-- 231
            H+  V   G V+  G NSS   G   T+  +  P  V  L G     V AG    GF  
Sbjct: 554 FHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLV-PGRVPGLSG--GVAVAAG----GFHS 606

Query: 232 LTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
           L +R  G V T GSN+ G+LG G T  R  P  +  L     VV + AG S+ LAV  +G
Sbjct: 607 LVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQGLS---GVVAVDAGNSHSLAVRSDG 663

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++G  S   LG G       P  +Q     G  VV ++ G  H + + S G V+ WG
Sbjct: 664 TVWTWGYNSYGQLGDGTTTRRSVP--VQVPGLSG--VVAMATGALHPLVVRSDGTVWAWG 719

Query: 350 KGYCGALGHGDEIDKT 365
               G LG+G  +  T
Sbjct: 720 YNSFGQLGNGSPLFAT 735


>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 557

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNG 289
           ++T    V+  G N    LG GD+     PK +  L     V +   +GP  +LA T +G
Sbjct: 51  YITADDEVYALGLNCSNCLGTGDSQSSIVPKKVDILSGRKVVSLSYGSGPHILLA-TEDG 109

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            ++++G      LG+G  +  + P  +      +K   V  V+ G  H +AL  SG VY 
Sbjct: 110 ELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKK---VTEVACGSHHSMALTDSGEVYA 166

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +SS L++ +AV +   +  +  +VD G VYG+G+ G G
Sbjct: 167 WGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNG 226

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  L +L+   V QI +G  H++ +TD G L+ +G N   QLG  
Sbjct: 227 QLGLGNNG---NQLTPCRLVALQGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQLGTG 283

Query: 467 TLRGCLEPTEIFIQE 481
                L P +I  ++
Sbjct: 284 NKSNQLSPVQIMTEK 298



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 7/287 (2%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
           T+      + ++  V++ G +    LG G   +  V   +++  S   VV +S  S  H 
Sbjct: 44  TSANEAIYITADDEVYALGLNCSNCLGTGDSQSSIVP-KKVDILSGRKVVSLSYGSGPHI 102

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIR 235
               + G++F  G N     G+  TN+ +  P LV A L      +V  G + +  LT  
Sbjct: 103 LLATEDGELFAWGHNGYSQLGNGTTNQGV-APVLVSANLLNKKVTEVACGSHHSMALTDS 161

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V+  G N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G
Sbjct: 162 GEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWG 221

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
              N  LG G   ++L P  +     +G+ V ++ +G  H +AL   G +Y WG    G 
Sbjct: 222 YNGNGQLGLGNNGNQLTPCRLVAL--QGLCVQQIVSGYAHSLALTDEGLLYAWGANTYGQ 279

Query: 356 LGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
           LG G++ ++  P  + + K  +  +  C     +     +G VY +G
Sbjct: 280 LGTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 326


>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
           griseus]
 gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
          Length = 531

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSY 281
           A  N   ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  
Sbjct: 29  ASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHV 87

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           +L+ T +GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL +
Sbjct: 88  LLS-TEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAA 145

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGF 400
            G V+ WG   CG +G G   ++  P  ++S L +   V +   +  +  ++D+G VYG+
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGW 205

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G+ G G LG  + G     L P  + +L++  V+QI  G  HT+ +TD G L+ +G N  
Sbjct: 206 GYNGNGQLGLGNNG---NQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTY 262

Query: 461 AQLGHDTLRGCLEPTEIFIQE 481
            QLG  +    L PT I +++
Sbjct: 263 GQLGTGSKNNLLSPTPIMVEK 283



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 6/253 (2%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           AS N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G     
Sbjct: 29  ASANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHV 87

Query: 231 FLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
            L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++G  +   +G G   ++  PR + +       VV ++ G    +A+  SG VY WG
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTK-RVVSIACGQTSSMAVLDSGEVYGWG 206

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               G LG G+  ++  P  +++L+S    Q+      T  L D G +Y +G   +G LG
Sbjct: 207 YNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG 266

Query: 410 FPDRGVSDKVLRP 422
               G  + +L P
Sbjct: 267 ---TGSKNNLLSP 276



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 115/278 (41%), Gaps = 5/278 (1%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 184
           +  N  VF  G +    LG G   +  V   ++       +  +S  S  H     + G 
Sbjct: 37  VTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHVLLSTEDGV 95

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G V   G N
Sbjct: 96  VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
             GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +G   N  LG 
Sbjct: 156 NCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGL 215

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   ++L P  ++    + + V ++  G  H +AL   G +Y WG    G LG G + + 
Sbjct: 216 GNNGNQLTP--VRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNL 273

Query: 365 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
             P P+   K  +  +  C     +      G VY +G
Sbjct: 274 LSPTPIMVEKERVVEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 10/186 (5%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H++ L ++  VF+ G + CG +G G    Q       +      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQ 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  VL SG+V+  G N +   G    N     P  V AL+ V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALT 249

Query: 234 IRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNG 289
             G ++  G+NT+GQLG G  + L  PTP  +    E   VV+IAA  S     A T  G
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTPIMV----EKERVVEIAACHSTHTSAAKTQGG 305

Query: 290 VVYSFG 295
            VY +G
Sbjct: 306 HVYMWG 311


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 148/314 (47%), Gaps = 24/314 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVT 223
           V  ++  ENHAA + + G+V+T G   S+  G  D   N     P++VE+L  V  K V 
Sbjct: 264 VQSIACGENHAAIITKQGEVYTWG---SYSSGRLDQKVNVNASCPKMVESLASVHVKAVA 320

Query: 224 AGLNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTP-KSIAPLEEVGSVVQIAAGPS 280
            G   T  +T+ G +   G   H  G +      ++  P K + P++ + SV +IA G  
Sbjct: 321 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNI-SVSKIACGEW 379

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 339
           +   +T +G ++++G G+   LGHG+     +P+ +++   KG  V  V+ G  H  A+ 
Sbjct: 380 HTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESL--KGSRVKSVACGPWHTAAIV 437

Query: 340 ---------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
                      SG ++TWG    G LGH D   K LP  + SL ++  +QV      T V
Sbjct: 438 EVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVV 497

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L  TG V+  G    G LG P    +D      +   L+   V +IS+G  H  V+T  G
Sbjct: 498 LTVTGMVFTIGSSRHGQLGNPK---ADGESICSVEGPLKTEFVREISSGSSHVAVLTMSG 554

Query: 451 RLFGFGDNERAQLG 464
           ++F +G     QLG
Sbjct: 555 KVFTWGKGAEGQLG 568



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 29/285 (10%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           P   PRLV + K +  + +  G N    +T +G V+T GS + G+L     ++   PK +
Sbjct: 249 PKSLPRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMV 308

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS------NFCLGHGEQ--HDELQPRA 315
             L  V  V  +A G  +  A+T +G ++ +G G+      N   G  +   H  L P  
Sbjct: 309 ESLASV-HVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPM- 366

Query: 316 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
                   I V +++ G+ H   + SSG ++T+G G  G LGHGD      P+ + SLK 
Sbjct: 367 ------DNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKG 420

Query: 376 HLAVQVCARKRKTFVLVD----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL 425
                V      T  +V+          +G ++ +G    G LG  DR +    L P  +
Sbjct: 421 SRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMK---LLPTCV 477

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
           DSL A+ + Q+S G   TVV+T  G +F  G +   QLG+    G
Sbjct: 478 DSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADG 522



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 18/221 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V +++  E H A +  SGQ+FT GD +    GH DT + + RP+ VE+LKG   K V  G
Sbjct: 371 VSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDT-QGVARPKEVESLKGSRVKSVACG 429

Query: 226 LNFTGFL----------TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
              T  +             G + T G    G+LGH D   +  P  +  L     ++Q+
Sbjct: 430 PWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAY-DLIQV 488

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGIHVVRVSAGD 333
           + G +  + +T  G+V++ GS  +  LG+ +   E    +I +     K   V  +S+G 
Sbjct: 489 SCGTAVTVVLTVTGMVFTIGSSRHGQLGNPKADGE----SICSVEGPLKTEFVREISSGS 544

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
            HV  L  SG V+TWGKG  G LG GD  +++ P  + +L+
Sbjct: 545 SHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSSPTLVEALE 585



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 25/234 (10%)

Query: 260 PKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 314
           PKS+  L  VGS     V  IA G ++   +T  G VY++GS S+  L      +   P+
Sbjct: 249 PKSLPRL--VGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPK 306

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSS 372
            +++     +HV  V+ G +H  A+  SG ++ WG+G    G +      ++  P     
Sbjct: 307 MVESL--ASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLG 364

Query: 373 LKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
              +++V ++   +  T ++  +G ++ +G   FG LG  D   +  V RP+ ++SL+  
Sbjct: 365 PMDNISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGD---TQGVARPKEVESLKGS 421

Query: 432 HVSQISTGLYHTVVVTD----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
            V  ++ G +HT  + +           G+LF +GD +R +LGH   +  L PT
Sbjct: 422 RVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRGKLGHADRKMKLLPT 475



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 138/344 (40%), Gaps = 22/344 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  H  +I+    V++ GS   G L              +   ++ HV  V+    H
Sbjct: 267 IACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCP-KMVESLASVHVKAVAFGSKH 325

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDT--NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
              +  SG++F  G+ +       D       F  + +  +  +   ++  G   T  +T
Sbjct: 326 TCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIIT 385

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVT------ 286
             G + T G  T G LGHGDT     PK +  L+  GS V+ +A GP +  A+       
Sbjct: 386 SSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLK--GSRVKSVACGPWHTAAIVEVMSSF 443

Query: 287 -GN---GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            GN   G ++++G      LGH ++  +L P  + +       +++VS G    V L  +
Sbjct: 444 KGNAPSGKLFTWGDADRGKLGHADRKMKLLPTCVDSL--TAYDLIQVSCGTAVTVVLTVT 501

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G V+T G    G LG+     +++      LK+    ++ +      VL  +G V+ +G 
Sbjct: 502 GMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              G LG  D         P ++++L    V  +  G   T  +
Sbjct: 562 GAEGQLGLGDYSNRSS---PTLVEALEGRDVESVVCGFNFTAAI 602



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 2/157 (1%)

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
           K + V  ++ G+ H   +   G VYTWG    G L     ++ + P+ + SL S     V
Sbjct: 260 KMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAV 319

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTGL 440
               + T  +  +G ++ +G  G  SLG  +         P + L  +    VS+I+ G 
Sbjct: 320 AFGSKHTCAITVSGELFEWG-EGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGE 378

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +HT ++T  G+LF +GD     LGH   +G   P E+
Sbjct: 379 WHTAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEV 415



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAAFVLQSGQVFTCGD 190
           VF+ GSS  G LG+     +  S   +  P     V ++S+  +H A +  SG+VFT G 
Sbjct: 504 VFTIGSSRHGQLGNPKADGE--SICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGK 561

Query: 191 NSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
            +    G  D +NR    P LVEAL+G   + V  G NFT  + +
Sbjct: 562 GAEGQLGLGDYSNRS--SPTLVEALEGRDVESVVCGFNFTAAICL 604


>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
          Length = 364

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           FC G    +R + R R   +  G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG--ADSRELQRRRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
                 P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I T     I +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKIMTLND--IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1054

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 140/323 (43%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q+     H A   + G+VFT G+      GH  T+  I RP+LVE+L       ++ G
Sbjct: 258 VNQIVCGSRHVALTTRQGEVFTWGEELGGRLGH-GTDTDISRPKLVESLSVTIVDFISCG 316

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  ++  G +   G  ++  G LG+        PK ++ PLE +  V+ +A G  + 
Sbjct: 317 EFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSGPLEGL-QVLSVACGSWHS 375

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 341
             +T  G +Y+FG G    LGHG +     P+ ++     G   V+V+ G  H  A+   
Sbjct: 376 ALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEAL--NGFRTVKVACGVWHSAAIVEA 433

Query: 342 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                    S  +YTWG G    LG GD+  + +P  L +L  H   Q+   +  T  L 
Sbjct: 434 SVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFHQLGCGQNMTVALA 493

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G VY  G    G LG P        L   + D L    V +IS G  H  V+T R  +
Sbjct: 494 TSGHVYTMGSSDNGQLGNPKSDGKHPCL---VKDKLANELVEEISCGAAHVAVLTSRSEV 550

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH  L     PT
Sbjct: 551 YTWGLGANGRLGHGDLNDKKTPT 573



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 149/352 (42%), Gaps = 36/352 (10%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
           QI  G  H  L +    VF+ G  L G LGHG       P+  + +S T ++F       
Sbjct: 260 QIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESLSVTIVDF------- 312

Query: 168 QVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTA 224
            +S  E H   +  SG +F  GD S  +   G+ DT    + P+ V   L+G+    V  
Sbjct: 313 -ISCGEFHTCAISASGDLFNWGDGSYRAGLLGY-DTGASHWLPKRVSGPLEGLQVLSVAC 370

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   +  +T  G ++T G    G LGHG+      PK +  L      V++A G  +  A
Sbjct: 371 GSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGF-RTVKVACGVWHSAA 429

Query: 285 V------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           +      TG  VV    Y++G G    LG G++   L P  +Q       H  ++  G  
Sbjct: 430 IVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFH--QLGCGQN 487

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
             VAL +SG+VYT G    G LG+     K        L + L  ++        VL   
Sbjct: 488 MTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKDKLANELVEEISCGAAHVAVLTSR 547

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
             VY +G    G LG  D  ++DK   P I+++L+  HV  IS G   T  +
Sbjct: 548 SEVYTWGLGANGRLGHGD--LNDKKT-PTIVEALKDRHVKSISCGSNFTTCI 596



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 16/293 (5%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 244 VLIPKPLESDVVLDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVE 303

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            L  V  V  I+ G  +  A++ +G ++++G GS     LG+        P+ + +   +
Sbjct: 304 SL-SVTIVDFISCGEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRV-SGPLE 361

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V+ V+ G  H   + S+G +YT+G G  GALGHG+      P+ + +L     V+V 
Sbjct: 362 GLQVLSVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVA 421

Query: 383 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
                +  +V+     G        + W G G      +G  +  L P  L +L  H+  
Sbjct: 422 CGVWHSAAIVEASVQTGMNVVSKKLYTW-GDGDKNRLGQGDKEARLIPTCLQALLEHNFH 480

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG---CLEPTEIFIQEMEE 484
           Q+  G   TV +   G ++  G ++  QLG+    G   CL   ++  + +EE
Sbjct: 481 QLGCGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKDKLANELVEE 533



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 18/180 (10%)

Query: 92  RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQ 151
           R ++    V HS+ IVE S    M + + + +T           G      LG G +  +
Sbjct: 416 RTVKVACGVWHSAAIVEASVQTGMNVVSKKLYTW----------GDGDKNRLGQGDKEAR 465

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRP-IFRP 208
            +  T +      +  Q+   +N    +  SG V+T G  DN        D   P + + 
Sbjct: 466 LIP-TCLQALLEHNFHQLGCGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKD 524

Query: 209 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE 268
           +L   L     ++++ G      LT R  V+T G   +G+LGHGD  D+ TP  +  L++
Sbjct: 525 KLANEL----VEEISCGAAHVAVLTSRSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKD 580


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 128/275 (46%), Gaps = 5/275 (1%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 187
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H       G+V+ 
Sbjct: 49  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVYA 107

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G+  TN  +    +   L      +V  G + T  LT  G V+  G N  G
Sbjct: 108 WGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNSG 167

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  NG +Y +G   N  LG G  
Sbjct: 168 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNN 227

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            ++  P  I     +G+++V+V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 228 GNQQTPCRIAAL--QGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALP 285

Query: 368 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            P+++ K  +  V  C     +     +G V  +G
Sbjct: 286 TPINTDKERIVEVAACHTSHTSAAKTQSGQVLMWG 320



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 9/250 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP  ++A T +
Sbjct: 45  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSL-SYGTGPHVVIA-TAD 102

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY++G      LG+G  +  L P  + T       V  V+ G  H +AL + G VY W
Sbjct: 103 GEVYAWGHNGYSQLGNGTTNHGLTPALVST-NLLSKRVTEVACGSHHTIALTTDGEVYAW 161

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G +G G   ++  P  +SS L++ + V +   +  +  ++D G +YG+G+   G 
Sbjct: 162 GYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYNCNGQ 221

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  + G      R   + +L+  ++ Q++ G  HT+ +TD G ++ +G N   QLG   
Sbjct: 222 LGLGNNGNQQTPCR---IAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGN 278

Query: 468 LRGCLEPTEI 477
                 PT I
Sbjct: 279 KSNQALPTPI 288



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 13/291 (4%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           ++ N A +V  + +VF  G N S C G  D    I  PR ++ L G     ++ G   TG
Sbjct: 38  SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDVLCGKKIVSLSYG---TG 93

Query: 231 ----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
                 T  G V+  G N + QLG+G T    TP  ++       V ++A G  + +A+T
Sbjct: 94  PHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALT 153

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G VY++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  +G +Y
Sbjct: 154 TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKV-VVNIACGQLCSMAVLDNGEIY 212

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
            WG    G LG G+  ++  P  +++L+    VQV      T  L D G VY +G   +G
Sbjct: 213 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGANSYG 272

Query: 407 SLGFPDRGVSDKVL-RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            LG  ++  S++ L  P   D  R   V+   T  + +   T  G++  +G
Sbjct: 273 QLGTGNK--SNQALPTPINTDKERIVEVAACHTS-HTSAAKTQSGQVLMWG 320


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 158/330 (47%), Gaps = 20/330 (6%)

Query: 116  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 172
            QI  G+  T ++ N+ +V +CG    G LG G  +    S T I+      V Q++ S  
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQG-NSDDLHSLTAISSIQGFVVTQLATSVG 1893

Query: 173  -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             + H   V +SG+VF+ GD      GH +++R   RPR +EAL+G    Q++ G   +  
Sbjct: 1894 SDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVIQLSCGFKHSAV 1952

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
            +T  G + T G+  +G+LG G T ++  P  +  LE  ++G V   A G ++ L V+ +G
Sbjct: 1953 VTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYV---ACGLNHTLCVSADG 2009

Query: 290  V-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
              V++FG G    LG G    +  P  I+    +G  + +V+ G +  VAL   G V+TW
Sbjct: 2010 TNVWAFGDGDFGKLGQGNTVGKHLPTKIKAL--QGHVIKKVACGTQFSVALSKYGKVFTW 2067

Query: 349  GKGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
            G+     +G  D        P+ ++SL  +    V      T VL   G V+G+G    G
Sbjct: 2068 GQERL--IGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEG 2125

Query: 407  SLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
             LG      +  V  P+++  L   ++ Q+
Sbjct: 2126 QLGL--GHTNSPVREPQLVPCLTGKNIRQV 2153



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 151/316 (47%), Gaps = 13/316 (4%)

Query: 154  SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 213
            +F  +  PS +   Q+   +N    V  +G V  CG+ S    G  +++  +     + +
Sbjct: 1821 AFVPVRVPSFSCSQQIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDD-LHSLTAISS 1879

Query: 214  LKGVPCKQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
            ++G    Q+   +   G    +T  G V + G   +G+LGHG++  +  P+ I  L+   
Sbjct: 1880 IQGFVVTQLATSVGSDGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-E 1938

Query: 271  SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
             V+Q++ G  +   VT +G +++FG+G    LG G   ++  P  +       I  V  +
Sbjct: 1939 EVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYV--A 1996

Query: 331  AGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
             G  H + + + G  V+ +G G  G LG G+ + K LP  + +L+ H+  +V    + + 
Sbjct: 1997 CGLNHTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSV 2056

Query: 390  VLVDTGSVYGFGWMGFGSLGFPD-RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
             L   G V+ +G      +G PD RG S+   +P+ + SL  + +  +  G  HT+V+T 
Sbjct: 2057 ALSKYGKVFTWGQERL--IGQPDTRGGSN--CQPQEVASLSGYFIEDVVCGAEHTLVLTS 2112

Query: 449  RGRLFGFGDNERAQLG 464
             G ++G+G N   QLG
Sbjct: 2113 DGDVWGWGSNSEGQLG 2128



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 5/206 (2%)

Query: 274  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG- 332
            QI  G +    V  NG V + G GS   LG G   D     AI + +   +  +  S G 
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGS 1894

Query: 333  DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
            D H +A+  SG V++WG G  G LGHG+   +  P  + +L+    +Q+    + + V+ 
Sbjct: 1895 DGHTLAVTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVT 1954

Query: 393  DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG-R 451
              G ++ FG   +G LG    G +     P  + +L +H +  ++ GL HT+ V+  G  
Sbjct: 1955 ADGKLFTFGNGDYGRLGL---GTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSADGTN 2011

Query: 452  LFGFGDNERAQLGHDTLRGCLEPTEI 477
            ++ FGD +  +LG     G   PT+I
Sbjct: 2012 VWAFGDGDFGKLGQGNTVGKHLPTKI 2037



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 6/157 (3%)

Query: 328  RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR--- 384
            ++  G      + ++G V   G+G  G LG G+  D      +SS++  +  Q+      
Sbjct: 1835 QIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGS 1894

Query: 385  KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
               T  + ++G V+ +G   +G LG    G SD+  RPR +++L+   V Q+S G  H+ 
Sbjct: 1895 DGHTLAVTESGEVFSWGDGDYGKLG---HGNSDRQRRPRQIEALQGEEVIQLSCGFKHSA 1951

Query: 445  VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            VVT  G+LF FG+ +  +LG  T      PT +   E
Sbjct: 1952 VVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALE 1988


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 20/321 (6%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           Q++    H     + G+VFT G+      GH  T+  I RP+LVE+L     + +  G  
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGH-GTDTDICRPKLVESLAVSNVEYIACGEF 287

Query: 228 FTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLA 284
            T  +T  G ++  G  ++  G LGHG  +    PK ++ PLE +  V+ +A G  +   
Sbjct: 288 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGL-QVLSVACGSWHSAL 346

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL----- 339
              +G +++FG G+   LGHG++     P+ ++     G   ++V+ G  H  A+     
Sbjct: 347 TMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEAL--SGFRAMKVACGVWHSAAIVEISG 404

Query: 340 -----DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
                  S  ++TWG G    LGHGD+  K +P  + +L  H   QV      T  L  +
Sbjct: 405 QASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATS 464

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G V+  G    G LG P    +D      + D L    V +IS G  H   +T R  ++ 
Sbjct: 465 GHVFTMGSSNNGQLGNPK---ADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYT 521

Query: 455 FGDNERAQLGHDTLRGCLEPT 475
           +G     +LGH ++    +PT
Sbjct: 522 WGMGANGRLGHGSVEDKKKPT 542



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 139/285 (48%), Gaps = 22/285 (7%)

Query: 106 IVETSAGNQMQ-ITTGRYHTLLISNSSV---FSCGSSLCGVLGHGPETTQCVSFTRINFP 161
           +VE+ A + ++ I  G +HT +++ S     +  GS   G+LGHG   +  +   R++ P
Sbjct: 270 LVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLP-KRVSGP 328

Query: 162 -SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                V+ V+    H+A  + SG++FT GD +    GH D    +  P+ VEAL G    
Sbjct: 329 LEGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGD-RESVAYPKEVEALSGFRAM 387

Query: 221 QVTAGL-NFTGFLTIRGH---------VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           +V  G+ +    + I G          + T G     +LGHGD   +  P  +  L +  
Sbjct: 388 KVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD-H 446

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-V 329
           +  Q+A G S  +A+  +G V++ GS +N  LG+  + D  QP  +Q   + G  +V  +
Sbjct: 447 NFHQVACGHSMTVALATSGHVFTMGSSNNGQLGN-PKADGKQPCMVQD--KLGNELVEEI 503

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           S G  HV AL S   VYTWG G  G LGHG   DK  P  + +LK
Sbjct: 504 SCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALK 548



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 142/344 (41%), Gaps = 20/344 (5%)

Query: 116 QITTGRYHT-LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           QI  G  H  L      VF+ G  L G LGHG +T  C     +   + ++V  ++  E 
Sbjct: 229 QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRP-KLVESLAVSNVEYIACGEF 287

Query: 175 HAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           H   V  SG ++  GD S  +   GH          R+   L+G+    V  G   +   
Sbjct: 288 HTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALT 347

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG---PSYMLAVTGNG 289
              G + T G  T G LGHGD      PK +  L      +++A G    + ++ ++G  
Sbjct: 348 MSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-RAMKVACGVWHSAAIVEISGQA 406

Query: 290 V-------VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
                   ++++G G    LGHG++  +L P  +Q       H  +V+ G    VAL +S
Sbjct: 407 STNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH--QVACGHSMTVALATS 464

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G+V+T G    G LG+     K        L + L  ++         L     VY +G 
Sbjct: 465 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGM 524

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
              G LG     V DK  +P ++D+L+  HV  IS G   T  +
Sbjct: 525 GANGRLGHG--SVEDKK-KPTLVDALKDRHVKSISCGSNFTTCI 565



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 125/278 (44%), Gaps = 16/278 (5%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           +Q+  G    G  T +G V T G    G+LGHG   D   PK +  L  V +V  IA G 
Sbjct: 228 EQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESL-AVSNVEYIACGE 286

Query: 280 SYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
            +   VT +G +Y +G GS     LGHG       P+ + +   +G+ V+ V+ G  H  
Sbjct: 287 FHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRV-SGPLEGLQVLSVACGSWHSA 345

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG-- 395
              SSG ++T+G G  G+LGHGD      P+ + +L    A++V      +  +V+    
Sbjct: 346 LTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQ 405

Query: 396 ------SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
                 S   F W G G       G  +  L P  + +L  H+  Q++ G   TV +   
Sbjct: 406 ASTNAMSRKLFTW-GDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATS 464

Query: 450 GRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 484
           G +F  G +   QLG+   D  + C+   ++  + +EE
Sbjct: 465 GHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEE 502


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 111/220 (50%), Gaps = 6/220 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V + G N  GQLG GD ++R  P  I+ L +   V  +AAG  +   ++  G ++SFG G
Sbjct: 160 VLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVF-VAAGSQHSFVLSKFGELFSFGCG 218

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
           +   LGHG +     PR I T    G H+V V+AG  H  A+DS G +YTWG    G LG
Sbjct: 219 TFGRLGHGNELPSFNPRPISTLV--GKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLG 276

Query: 358 HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
            G     TLP     L+    V+V   K  T VL   G VY FG+   G LG      +D
Sbjct: 277 LGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGI--GSYTD 334

Query: 418 KVLRPRI-LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            +   RI LD  +   +  I+ G YH +++T +G ++ FG
Sbjct: 335 SIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFG 374



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 175/375 (46%), Gaps = 32/375 (8%)

Query: 117 ITTGRYHTL--LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           I  G  H L  L ++++V S G +  G LG G +  +C   T I+  S +  V V+A   
Sbjct: 143 IACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHP-TPISGLSQSIPVFVAAGSQ 201

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  + + G++F+ G  +    GH +   P F PR +  L G     V AGL  +  +  
Sbjct: 202 HSFVLSKFGELFSFGCGTFGRLGHGNE-LPSFNPRPISTLVGKHIVSVAAGLMHSAAVDS 260

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           +G ++T G N +GQLG G       P     LE   ++V++  G ++ L +  NG VYSF
Sbjct: 261 QGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERF-NIVKVVCGKNHTLVLDVNGHVYSF 319

Query: 295 GSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
             G N C  LG G   D ++P  I    ++   ++ ++AG  HV+ L   G VY++G   
Sbjct: 320 --GFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLLLTKKGCVYSFGYIS 377

Query: 353 CGALGHGDEID-KTLPE--PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            GALG GD +  ++ P+  P S         + + K           +YG     + S  
Sbjct: 378 DGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKE----------IYG----EYNSDS 423

Query: 410 FPDRGVSDKVLRPRILD--SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-- 465
             D   ++  L P++++  +       +I+ G +H+ ++T  GRL+ FG  +  +LG+  
Sbjct: 424 ENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNC 483

Query: 466 --DTLRGCLEPTEIF 478
             D    C+   EI+
Sbjct: 484 QEDQDMPCIVNKEIW 498



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 4/162 (2%)

Query: 316 IQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           + T  ++G+ V  ++ GD H +A L +   V +WG    G LG GD++++  P P+S L 
Sbjct: 130 LPTLIKQGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLS 189

Query: 375 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
             + V V A  + +FVL   G ++ FG   FG LG    G       PR + +L   H+ 
Sbjct: 190 QSIPVFVAAGSQHSFVLSKFGELFSFGCGTFGRLG---HGNELPSFNPRPISTLVGKHIV 246

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
            ++ GL H+  V  +G L+ +G N   QLG  T++    P +
Sbjct: 247 SVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNK 288



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 6/215 (2%)

Query: 272 VVQIAAGPSYMLAVTGN-GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           V  IA G S+ LAV  N   V S+G      LG G+Q +   P  I    +     V V+
Sbjct: 140 VSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQS--IPVFVA 197

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           AG +H   L   G ++++G G  G LGHG+E+    P P+S+L     V V A    +  
Sbjct: 198 AGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHIVSVAAGLMHSAA 257

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           +   G++Y +GW  +G LG    G   K   P     L   ++ ++  G  HT+V+   G
Sbjct: 258 VDSQGALYTWGWNRYGQLGL---GTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNG 314

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 485
            ++ FG N   QLG  +    ++P  I +   + D
Sbjct: 315 HVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQND 349



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 18/207 (8%)

Query: 113 NQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF--PSAAHVVQV 169
           N +++  G+ HTL++  N  V+S G ++CG LG G   T  +   RI+        ++ +
Sbjct: 296 NIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIG-SYTDSIKPNRIDLDLKQNDEIIDI 354

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-- 227
           +A   H   + + G V++ G  S    G  D      RP+L+      P        N  
Sbjct: 355 AAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLM------PFSHFNHEFNDS 408

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVT 286
              +  I G  +   S++   + + +   +  PK +    E+G V V+IAAG  +   +T
Sbjct: 409 IDSYKEIYGEYN---SDSENDINNNNA--KLPPKVVELHNEIGDVAVKIAAGGWHSAIIT 463

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQP 313
            +G +Y+FG G NF LG+  Q D+  P
Sbjct: 464 SSGRLYTFGLGDNFRLGNNCQEDQDMP 490


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 152/353 (43%), Gaps = 17/353 (4%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  L+S+  V   G +  G LG G  T +           A+ V  ++A ++H
Sbjct: 123 IAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL--ASGVTAIAAGDDH 180

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
                 SG V   GDN S   G    T+R    P  V  L G     + AG + T  L  
Sbjct: 181 TCARTSSGGVMCWGDNWSGQLGDGTTTDRST--PVAVSGL-GSGVTAIAAGGSHTCALMS 237

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQLG G T DR TP +++ L     V  IAAG  +  A T +G V  +
Sbjct: 238 SGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLAS--GVTAIAAGGFHTCARTSSGGVMCW 295

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G+  +  LG G       P A+         V  ++AGD H  AL SSG V+ WG  + G
Sbjct: 296 GANWSGQLGDGTTTARSTPVAVSGLASG---VTAIAAGDSHTCALTSSGGVWCWGYNFFG 352

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG G   D++ P  +S L S +   + A    T  L+ +G V  +G    G LG    G
Sbjct: 353 QLGDGTTTDRSTPVAVSGLGSGV-TAIAAGDFHTCALMSSGGVRCWGRNKDGQLG---DG 408

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
            +     P  +  L    V+ I+ G  HT   T  G +  +GDN   QLG  T
Sbjct: 409 TTTTRSTPVAVSGL-VSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGT 460



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 166/397 (41%), Gaps = 28/397 (7%)

Query: 89  NWKRVLRFLQSVEHSSDIVETSAGNQM-QITTGRYHTL-LISNSSVFSCGSSLCGVLGHG 146
           NW   L    + + S+ +  +  G+ +  I  G  HT  L+S+  V+  G +  G LG G
Sbjct: 196 NWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDG 255

Query: 147 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT---NR 203
             T +           A+ V  ++A   H      SG V   G N S   G   T   + 
Sbjct: 256 TTTDRSTPVAVSGL--ASGVTAIAAGGFHTCARTSSGGVMCWGANWSGQLGDGTTTARST 313

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           P+    L   +       + AG + T  LT  G V   G N  GQLG G T DR TP ++
Sbjct: 314 PVAVSGLASGVT-----AIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAV 368

Query: 264 APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
           + L     V  IAAG  +  A+  +G V  +G   +  LG G       P A+       
Sbjct: 369 SGLGS--GVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLVSG- 425

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
             V  ++AGD+H  A  SSG V  WG  + G LG G   D++ P  +S L S +   + A
Sbjct: 426 --VTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGV-TAIAA 482

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
               T  L+ +G V+ +G    G LG     DRG       P  +  L +  V+ I++G 
Sbjct: 483 GGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGT------PVAVSGLPS-EVTAIASGG 535

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            HT  +T  G +  +G N   QLG  T      P  +
Sbjct: 536 VHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAV 572



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 158/359 (44%), Gaps = 27/359 (7%)

Query: 117 ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT   ++S    C G +  G LG G  T +          S   V  ++A  +H
Sbjct: 429 IAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSG--VTAIAAGGSH 486

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTA---GLNFT 229
              ++ SG V+  G NSS   G     D   P+       A+ G+P  +VTA   G   T
Sbjct: 487 TCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPV-------AVSGLP-SEVTAIASGGVHT 538

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT  G V   G+N  GQLG G T  R TP +++ L     V+ IAAG  +  A+T +G
Sbjct: 539 CALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPS--GVMAIAAGDLHTCALTSSG 596

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+ +G+ S+  LG G       P A+         V  ++AG  H  AL SSG V+ WG
Sbjct: 597 GVWCWGANSSGQLGDGTTTARSTPVAVSGLPSG---VTAIAAGSFHTCALTSSGGVWCWG 653

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             + G LG G   D + P  +S L S +   + A +  T     +G V+ +    +G LG
Sbjct: 654 ANWSGQLGDGSYTDSSTPVAVSGLPSGV-TAIAAGRFHTCARTGSGGVWCWASNRYGQLG 712

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
             D   +D    P  +  L    V+ I+ G+ HT   T  G +  +G N   QLG   L
Sbjct: 713 --DGSYTDSS-TPVAVSGL-VSGVTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDGRL 767



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 121/264 (45%), Gaps = 12/264 (4%)

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           L+GV    + AG   T  LT  G V   G N  GQLG G T DR TP +++ L     V 
Sbjct: 66  LQGV--TAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTS--GVT 121

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            IAAG ++  A+  +G V  +G   +  LG G   D   P A+         V  ++AGD
Sbjct: 122 AIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASG---VTAIAAGD 178

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           +H  A  SSG V  WG  + G LG G   D++ P  +S L S +   + A    T  L+ 
Sbjct: 179 DHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGV-TAIAAGGSHTCALMS 237

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +G V+ +G    G LG  D   +D+   P  +  L A  V+ I+ G +HT   T  G + 
Sbjct: 238 SGGVWCWGDNWSGQLG--DGTTTDRS-TPVAVSGL-ASGVTAIAAGGFHTCARTSSGGVM 293

Query: 454 GFGDNERAQLGHDTLRGCLEPTEI 477
            +G N   QLG  T      P  +
Sbjct: 294 CWGANWSGQLGDGTTTARSTPVAV 317


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 155/343 (45%), Gaps = 20/343 (5%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASE 173
           I  G+Y T  +S + +V +CG    G LG G    Q +    +  P  +   V     S+
Sbjct: 406 IEAGQYCTFSVSADGAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSD 465

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-ALKGVPCKQVTAGLNFTGFL 232
            H   V   G+VF+ GD      GH ++    + P++++  L G     V+AG   +  +
Sbjct: 466 GHTLAVTAEGEVFSWGDGDYGKLGHGNSATQKY-PKIIQGPLLGKVVVCVSAGYRHSAAV 524

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-VV 291
           T  G ++T G    G+LGH D+  R  P  +  +  VG   Q+A G S+ +AV  +G +V
Sbjct: 525 TNDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDISGVG---QVACGSSHTIAVAQDGRIV 581

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +SFG G N  LGHG+ +   +P+ I+     G  + +V AG +  +AL S+G V+ WG G
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYRPKVIEALH--GFIIRKVCAGSQSSLALTSAGQVFAWGCG 639

Query: 352 YCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            C  LG G     +L P  +  L     + +         L     V+ +G    G  G 
Sbjct: 640 SC--LGCGSSETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCG- 696

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYH----TVVVTDR 449
                S  V +P+ +  L    + QI+ G  H    T V TDR
Sbjct: 697 -QGHTSTPVTKPKKVIGLEGVSIQQITAGTSHSLAWTAVPTDR 738



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 10/274 (3%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+  G NSS       T   I +P+L +       + + AG   T  ++  G V  CG  
Sbjct: 372 VYVWGSNSSHQLAE-GTLEKILQPKLAQGFSDA--QMIEAGQYCTFSVSADGAVKACGKG 428

Query: 245 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
           ++G+LG GD+ ++  PK +   P   +  V        + LAVT  G V+S+G G    L
Sbjct: 429 SYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           GHG    +  P+ IQ     G  VV VSAG  H  A+ + G +YTWG+G  G LGH D  
Sbjct: 489 GHGNSATQKYPKIIQG-PLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSH 547

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            + +P  +  + S +    C       V  D   V+ FG    G LG    G +++V RP
Sbjct: 548 SRNVPTLVKDI-SGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLG---HGDTNRVYRP 603

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           +++++L    + ++  G   ++ +T  G++F +G
Sbjct: 604 KVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG 637



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 137/293 (46%), Gaps = 25/293 (8%)

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGFLTIRGHV 238
           G V  CG  S    G  D+N      +LV      ++ V   + + G   T  +T  G V
Sbjct: 420 GAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDG--HTLAVTAEGEV 477

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGS 296
            + G   +G+LGHG++  +  PK I  PL  +G VV  ++AG  +  AVT +G +Y++G 
Sbjct: 478 FSWGDGDYGKLGHGNSATQKYPKIIQGPL--LGKVVVCVSAGYRHSAAVTNDGELYTWGE 535

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG-YVYTWGKGYCGA 355
           G    LGH + H     R + T  +    V +V+ G  H +A+   G  V+++G G  G 
Sbjct: 536 GDFGRLGHSDSHS----RNVPTLVKDISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGK 591

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW---MGFGSLGFPD 412
           LGHGD      P+ + +L   +  +VCA  + +  L   G V+ +G    +G GS     
Sbjct: 592 LGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGS----- 646

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
                  LRPR+++ L    +  IS G  H + ++    +F +G+N   Q G 
Sbjct: 647 --SETTSLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQ 697



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 114/258 (44%), Gaps = 33/258 (12%)

Query: 235  RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            +  V+  G+  HGQL   G +   PT   +AP   +    Q+  G +    V  NG V +
Sbjct: 3859 KSEVYLWGNGRHGQLADAGTSASVPT---LAP--SLSQTQQVVCGQNCTFLVQANGTVLA 3913

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGY 352
             G GS   LG G   D   P  I   +   +  +  S G D H +AL  +G V++WG G 
Sbjct: 3914 VGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGD 3973

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--- 409
             G LGHG+   +  P+ +  L+    VQ+    + + V+   G ++ FG    G LG   
Sbjct: 3974 YGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRS 4033

Query: 410  -----FPDR--------------GVSDKVL----RPRILDSLRAHHVSQISTGLYHTVVV 446
                  P+R              G+ D +L    RP+I+ +L    +  I+ G  H + +
Sbjct: 4034 TSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHILAL 4093

Query: 447  TDRGRLFGFGDNERAQLG 464
            ++ G ++ +G N  AQLG
Sbjct: 4094 SNTGDVYAWGCNCEAQLG 4111



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 11/194 (5%)

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            G   VY +G+G      HG+  D     ++ T         +V  G      + ++G V 
Sbjct: 3858 GKSEVYLWGNGR-----HGQLADAGTSASVPTLAPSLSQTQQVVCGQNCTFLVQANGTVL 3912

Query: 347  TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR---KRKTFVLVDTGSVYGFGWM 403
              G+G  G LG G+  D   P  +S+L+ ++  Q+         +  L +TG V+ +G  
Sbjct: 3913 AVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDG 3972

Query: 404  GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             +G LG    G S++  RP+ ++ L+   V Q++ G  H+ VVT  G+LF FG  +  +L
Sbjct: 3973 DYGKLG---HGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRL 4029

Query: 464  GHDTLRGCLEPTEI 477
            G  +    + P  +
Sbjct: 4030 GQRSTSNKMIPERV 4043



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 36/264 (13%)

Query: 110  SAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 168
            S     Q+  G+  T L+ +N +V + G    G LG G  +    + T I+      V Q
Sbjct: 3888 SLSQTQQVVCGQNCTFLVQANGTVLAVGEGSYGRLGQG-NSDDLYTPTIISALQGYVVTQ 3946

Query: 169  VSAS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
            +  S   + H+  + ++G+VF+ GD      GH ++ R   RP+ +E L+G    Q+  G
Sbjct: 3947 LVTSYGSDGHSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRPKQIEGLQGEEVVQLACG 4005

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
               +  +T  G + T GS   G+LG   T ++  P+ +  L+      ++   P  ML  
Sbjct: 4006 FKHSAVVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAML-- 4063

Query: 286  TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
                                + H+  +P+ I     +G+ +  ++ G EH++AL ++G V
Sbjct: 4064 --------------------KNHN--RPQIIPAL--EGVFIEDIAVGCEHILALSNTGDV 4099

Query: 346  YTWGKGYCGA---LGHGDEIDKTL 366
            Y WG   C A   LGH + + + +
Sbjct: 4100 YAWGCN-CEAQLGLGHSNPVKEPI 4122



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            VY WG G  G L        ++P    SL      QV   +  TF++   G+V   G   
Sbjct: 3862 VYLWGNGRHGQLADAG-TSASVPTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVGEGS 3918

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +  P I+ +L+ + V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3919 YGRLG---QGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYG 3975

Query: 462  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
            +LGH        P +I   + EE   LA
Sbjct: 3976 KLGHGNSERQRRPKQIEGLQGEEVVQLA 4003



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 100/261 (38%), Gaps = 38/261 (14%)

Query: 123  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
            H+L ++ +  VFS G    G LGHG    Q     +I       VVQ++    H+A V  
Sbjct: 3956 HSLALTETGEVFSWGDGDYGKLGHGNSERQ-RRPKQIEGLQGEEVVQLACGFKHSAVVTA 4014

Query: 182  SGQVFTCGDNSSFCCGHRDTNRPIF----------------------------RPRLVEA 213
             G++FT G   S   G R T+  +                             RP+++ A
Sbjct: 4015 DGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPA 4074

Query: 214  LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
            L+GV  + +  G      L+  G V+  G N   QLG G +     P  +  L+   ++ 
Sbjct: 4075 LEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQG-KNIR 4133

Query: 274  QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE----QHDELQ---PRAIQTFRRKGIHV 326
            QI+AG  +  A T   +       S   LG  +    Q++ L+   P  + T  R   H 
Sbjct: 4134 QISAGRCHSSAWTTPALSTRASGCSGIQLGLPQSVPPQYNALKDCSPEVLNTRLRVLYHF 4193

Query: 327  VRVSAGDEHVVALDSSGYVYT 347
              +      ++ LD    V T
Sbjct: 4194 SDLMYKSWRLLNLDPRSQVST 4214



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           VY WG      L  G  ++K L   L+   S  A  + A +  TF +   G+V   G   
Sbjct: 372 VYVWGSNSSHQLAEGT-LEKILQPKLAQGFSD-AQMIEAGQYCTFSVSADGAVKACGKGS 429

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY-HTVVVTDRGRLFGFGDNERAQL 463
           +G LG  D   +  + +  +L+  R       S G   HT+ VT  G +F +GD +  +L
Sbjct: 430 YGRLGLGDSN-NQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKL 488

Query: 464 GH 465
           GH
Sbjct: 489 GH 490


>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 732

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 163/362 (45%), Gaps = 21/362 (5%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H+L+  S+ +V++ G+++ G  G G   T   S   +   + +    V+A + H
Sbjct: 337 VAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKT---STAPVQVTALSGGFTVAAGKAH 393

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           A  V   G V+  G N     G   T      P  V  L G     V AG + +  L + 
Sbjct: 394 ALAVRSDGTVWAWGQNLFGQLGD-GTRMQRTAPVQVTGLSG--GVAVAAGDDHSLGLCLD 450

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   G NT GQLG G T  RP P  +    E+  VV +AAG S+ LAV+ +G V+++G
Sbjct: 451 GTVWAWGQNTSGQLGDGTTAQRPAPVQV---TELSGVVAVAAGTSHSLAVSSDGTVWAWG 507

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           S ++  LG G     L P  +Q     G  VV V+AG  H +A+ S G V+ WG      
Sbjct: 508 SNASGQLGDGTTRARLTP--VQVAGLSG--VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQ 563

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G    +  P  +  L   +A    A    + VL   G+V+G+G   +G LG    G 
Sbjct: 564 LGDGTNTQRPTPVRVPGLSGGVAA--AAGYFHSLVLRSDGTVWGWGNNAYGQLG---NGT 618

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           ++    P  +  L       ++ G + ++ V   G +  +GDN   QLG  T+   L P 
Sbjct: 619 ANASFSPVQVTGLSGGVA--VAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRLAPV 676

Query: 476 EI 477
            +
Sbjct: 677 GV 678



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 153/364 (42%), Gaps = 21/364 (5%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G  H+L +  + +V++ G +  G LG G    +      +     + VV V+A  
Sbjct: 185 VKVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGTTVQRSAP---VQVAGLSGVVAVAAGS 241

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +H+  V   G V+  G NS    G   T+  +  P  V  L G     V AG+  +  + 
Sbjct: 242 SHSLAVRSDGTVWAWGRNSDGQLGDGTTSARL-TPVQVTGLSG--GVAVAAGMFHSLAVR 298

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G NT GQLG G      TP     L E  +V   AAG ++ L    +G V++
Sbjct: 299 SDGTVWAWGQNTRGQLGDGSMTASLTPVQAIGLSEGEAV---AAGETHSLVARSDGTVWA 355

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+      G G       P  +            V+AG  H +A+ S G V+ WG+   
Sbjct: 356 WGNNIEGQRGDGSAKTSTAPVQVTALSGG----FTVAAGKAHALAVRSDGTVWAWGQNLF 411

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G  + +T P  ++ L   +A  V A    +  L   G+V+ +G    G LG    
Sbjct: 412 GQLGDGTRMQRTAPVQVTGLSGGVA--VAAGDDHSLGLCLDGTVWAWGQNTSGQLGD--- 466

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                  RP  +       V  ++ G  H++ V+  G ++ +G N   QLG  T R  L 
Sbjct: 467 --GTTAQRPAPVQVTELSGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLT 524

Query: 474 PTEI 477
           P ++
Sbjct: 525 PVQV 528



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 161/365 (44%), Gaps = 21/365 (5%)

Query: 114 QMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
           + ++  G  H+L I  + +V++ GS+  G LG G  + + V    +    A   V V+A 
Sbjct: 34  KSRLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDA---VLVAAG 90

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            +H+  +   G  +  G N S   G   T R   RP  V  L     + V AG   +  +
Sbjct: 91  SSHSLAIRSDGTAWAWGHNGSGELGDGTTFRRT-RPVQVTGLS--EAEAVAAGDGHSLVV 147

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   G N+ GQLG G T +R  P  +A L      V++AAG  + LAV  +G V+
Sbjct: 148 RSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLS---GGVKVAAGDGHSLAVCLDGTVW 204

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G   +  LG G       P  +Q     G  VV V+AG  H +A+ S G V+ WG+  
Sbjct: 205 AWGRNDSGQLGDGTTVQRSAP--VQVAGLSG--VVAVAAGSSHSLAVRSDGTVWAWGRNS 260

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G    +  P  ++ L   +A  V A    +  +   G+V+ +G    G LG   
Sbjct: 261 DGQLGDGTTSARLTPVQVTGLSGGVA--VAAGMFHSLAVRSDGTVWAWGQNTRGQLG--- 315

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            G     L P  + ++       ++ G  H++V    G ++ +G+N   Q G  + +   
Sbjct: 316 DGSMTASLTP--VQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTST 373

Query: 473 EPTEI 477
            P ++
Sbjct: 374 APVQV 378



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 159/366 (43%), Gaps = 25/366 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G +H+L + S+ +V++ G +  G LG G  T    S T +     +    V+A E
Sbjct: 285 VAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMT---ASLTPVQAIGLSEGEAVAAGE 341

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRD--TNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            H+      G V+  G+N     G R   + +    P  V AL G     V AG      
Sbjct: 342 THSLVARSDGTVWAWGNN---IEGQRGDGSAKTSTAPVQVTALSG--GFTVAAGKAHALA 396

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +   G V   G N  GQLG G  + R  P  +  L      V +AAG  + L +  +G V
Sbjct: 397 VRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTGLS---GGVAVAAGDDHSLGLCLDGTV 453

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  LG G      +P  +Q     G  VV V+AG  H +A+ S G V+ WG  
Sbjct: 454 WAWGQNTSGQLGDGTTAQ--RPAPVQVTELSG--VVAVAAGTSHSLAVSSDGTVWAWGSN 509

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G    +  P  ++ L     V V A    +  +   G+V+ +G   F  LG  
Sbjct: 510 ASGQLGDGTTRARLTPVQVAGLSG--VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLG-- 565

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
             G + +   P  +  L     +  + G +H++V+   G ++G+G+N   QLG+ T    
Sbjct: 566 -DGTNTQRPTPVRVPGLSGGVAA--AAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANAS 622

Query: 472 LEPTEI 477
             P ++
Sbjct: 623 FSPVQV 628



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 127/311 (40%), Gaps = 58/311 (18%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G+ H L + S+ +V++ G +L G LG G   T+      +     +  V V+A ++H
Sbjct: 387 VAAGKAHALAVRSDGTVWAWGQNLFGQLGDG---TRMQRTAPVQVTGLSGGVAVAAGDDH 443

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           +  +   G V+  G N+S   G   T  RP   P  V  L GV    V AG + +  ++ 
Sbjct: 444 SLGLCLDGTVWAWGQNTSGQLGDGTTAQRPA--PVQVTELSGVVA--VAAGTSHSLAVSS 499

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   GSN  GQLG G T  R TP  +A L     VV +AAG  + LAV  +G V+++
Sbjct: 500 DGTVWAWGSNASGQLGDGTTRARLTPVQVAGLS---GVVAVAAGYFHSLAVRSDGTVWAW 556

Query: 295 GSGSNFCLGHGEQHDELQP----------------------RAIQTFRRKGIHV------ 326
           G+ S F LG G       P                      R+  T    G +       
Sbjct: 557 GNNSFFQLGDGTNTQRPTPVRVPGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGN 616

Query: 327 ------------------VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
                             V V+AGD   +A+ S G V  WG    G LG G    +  P 
Sbjct: 617 GTANASFSPVQVTGLSGGVAVAAGDFQSLAVRSDGTVRAWGDNIYGQLGDGTVTTRLAPV 676

Query: 369 PLSSLKSHLAV 379
            ++ L   +AV
Sbjct: 677 GVNGLSGGMAV 687



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 111/249 (44%), Gaps = 20/249 (8%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L +S + +V++ GS+  G LG G   T     T +     + VV V+A  
Sbjct: 485 VAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDG---TTRARLTPVQVAGLSGVVAVAAGY 541

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  V   G V+  G+NS F  G   +T RP   P  V  L G     V A   +   L
Sbjct: 542 FHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRPT--PVRVPGLSG----GVAAAAGYFHSL 595

Query: 233 TIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            +R  G V   G+N +GQLG+G      +P  +  L      V +AAG    LAV  +G 
Sbjct: 596 VLRSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGLS---GGVAVAAGDFQSLAVRSDGT 652

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V ++G      LG G     L P  +          + V+AG+   +A+ S G ++ WG 
Sbjct: 653 VRAWGDNIYGQLGDGTVTTRLAPVGVNGLSGG----MAVAAGNGFSLAVHSGGMLHAWGY 708

Query: 351 GYCGALGHG 359
              G LGHG
Sbjct: 709 NTDGQLGHG 717


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 144/301 (47%), Gaps = 18/301 (5%)

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           V+  + H A V +SG++FT G N     G  D  +   RP  V+ LK    K V  G   
Sbjct: 41  VACGDEHTALVTESGRLFTFGVNDWGQLGI-DEVKVSTRPCCVKKLKPEKVKVVACGRIH 99

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE---EVGSVVQIAAGPSYMLAV 285
           T   T  G ++T G+N  GQLG  D      P S  P++   E      +AAG  + +A+
Sbjct: 100 TIVATESGCLYTFGANGDGQLGVEDI-----PSSNCPVKVECEPRQYKALAAGADHSVAL 154

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T +G +Y +G GS   LG G+  D+  P  + T  +    V+ V+ G  H   +   G V
Sbjct: 155 TDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDNK----VISVACGYYHTAFVTDVGEV 210

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           +T+G+G  G LG G +  K +     ++        C     T VL + G VY FG  G 
Sbjct: 211 FTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGSH-TVVLTECGKVYTFGEGGN 269

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G LG  ++    +   P  L+    H V+QI+ G  HT +VT++G+L+ FGD   A+LG 
Sbjct: 270 GQLGHKNKYFYCET--PVWLNF--KHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGL 325

Query: 466 D 466
           D
Sbjct: 326 D 326



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 9/208 (4%)

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           +A G  +   VT +G +++FG      LG  E     +P  ++  + + + VV  + G  
Sbjct: 41  VACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVV--ACGRI 98

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H +    SG +YT+G    G LG  D      P  +          + A    +  L D 
Sbjct: 99  HTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQYKA-LAAGADHSVALTDD 157

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G +Y +G    G LG  D  + DK   P +L +   + V  ++ G YHT  VTD G +F 
Sbjct: 158 GELYVWGGGSEGQLGLGD--IDDKST-PTLLST--DNKVISVACGYYHTAFVTDVGEVFT 212

Query: 455 FGDNERAQLGHDTLRG-CLEPTEIFIQE 481
           FG+ +  +LG  T  G  + P ++ I E
Sbjct: 213 FGEGDGGKLGQGTDYGKAVAPKKVNIPE 240



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 74/173 (42%), Gaps = 16/173 (9%)

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           SG+ F  G     D L  +    F  +G     V+ GDEH   +  SG ++T+G    G 
Sbjct: 12  SGAIFTFGKSRFGDNLPNK----FWVRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQ 67

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG  +    T P  +  LK      V   +  T V  ++G +Y FG  G G LG  D   
Sbjct: 68  LGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPS 127

Query: 416 SDKVLR----PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           S+  ++    PR   +L A        G  H+V +TD G L+ +G     QLG
Sbjct: 128 SNCPVKVECEPRQYKALAA--------GADHSVALTDDGELYVWGGGSEGQLG 172



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 5/137 (3%)

Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G YHT  +++   VF+ G    G LG G +  + V+  ++N P  A  V    S 
Sbjct: 192 ISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGS- 250

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   + + G+V+T G+  +   GH++       P  +     V   Q+ AG N T  +T
Sbjct: 251 -HTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPVWLNFKHKV--TQIAAGENHTALVT 307

Query: 234 IRGHVHTCGSNTHGQLG 250
            +G ++T G   H +LG
Sbjct: 308 EKGQLYTFGDGRHAKLG 324



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 14/179 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+ V+    H AFV   G+VFT G+      G          P+ V   +    K V  G
Sbjct: 191 VISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKA--KSVACG 248

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---DRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            + T  LT  G V+T G   +GQLGH +     + P       L     V QIAAG ++ 
Sbjct: 249 GSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPV-----WLNFKHKVTQIAAGENHT 303

Query: 283 LAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             VT  G +Y+FG G +  LG  H    ++  P+  + F +    V +VS G  H++ L
Sbjct: 304 ALVTEKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKRFSK--FIVTQVSCGGCHMIVL 360



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 15/136 (11%)

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 388
           ++AGD+  +    SG ++T+GK   G           LP     ++   A  V      T
Sbjct: 1   MAAGDDSEIP--ESGAIFTFGKSRFG---------DNLPNKFW-VRGDKAKSVACGDEHT 48

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
            ++ ++G ++ FG   +G LG  +  VS    RP  +  L+   V  ++ G  HT+V T+
Sbjct: 49  ALVTESGRLFTFGVNDWGQLGIDEVKVS---TRPCCVKKLKPEKVKVVACGRIHTIVATE 105

Query: 449 RGRLFGFGDNERAQLG 464
            G L+ FG N   QLG
Sbjct: 106 SGCLYTFGANGDGQLG 121


>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
 gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Danio rerio]
 gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
          Length = 531

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 7/260 (2%)

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYM 282
           A  N   ++T    V+  G N    LG GD+     PK +  L     + +   +GP ++
Sbjct: 29  ASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGP-HV 87

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           L VT +G +Y++G      LG+G  +  + P  + T   +G  V  VS G  H +AL   
Sbjct: 88  LLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVST-NLQGKRVTEVSCGSHHSLALTHE 146

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G V+ WG   CG +G G   ++  P  +S+ L++ + V +   +  +  + D G VYG+G
Sbjct: 147 GEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWG 206

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
           + G G LG  + G     L P  L +L+   V QI++G  H++ +TD G L+ +G N   
Sbjct: 207 YNGNGQLGLGNNG---NQLTPCRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYG 263

Query: 462 QLGHDTLRGCLEPTEIFIQE 481
           QLG       L P ++  ++
Sbjct: 264 QLGTGNKSNQLSPVQVMTEK 283



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 7/276 (2%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 187
           +  V+  G +    LG G ++   ++  +++  S   ++ +S  S  H   V + G+++ 
Sbjct: 40  DDEVYVLGLNCSNCLGTG-DSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYA 98

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
            G N     G+  TN+ +  P LV   L+G    +V+ G + +  LT  G V   G N  
Sbjct: 99  WGHNGYSQLGNGTTNQGV-SPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNC 157

Query: 247 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           GQ+G G T ++PTP+ ++   +   +V IA G +  +AVT NG VY +G   N  LG G 
Sbjct: 158 GQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGN 217

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
             ++L P   +    +G  V+++++G  H +AL   G +Y WG    G LG G++ ++  
Sbjct: 218 NGNQLTP--CRLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275

Query: 367 PEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
           P  + + K  +  +  C     +     +G VY +G
Sbjct: 276 PVQVMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 6/183 (3%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           +++ G +H+L +++   VF+ G + CG +G G    Q       N      +V ++  + 
Sbjct: 132 EVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQT 191

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
            +  V  +G+V+  G N +   G  +    +   RL+ AL+G    Q+ +G   +  LT 
Sbjct: 192 SSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLI-ALQGFCVLQIASGYAHSLALTD 250

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVY 292
            G ++  G+NT+GQLG G+  ++ +P  +  + E   +V+IAA  S     A T +G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNQLSPVQV--MTEKERIVEIAACHSTHTSAAKTQSGQVY 308

Query: 293 SFG 295
            +G
Sbjct: 309 MWG 311


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 112/219 (51%), Gaps = 15/219 (6%)

Query: 260 PKSIAPLEEVGS-----------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-Q 307
           P S +PLEE  +           V  ++ G  + LAV   G V+++G+GS   LG GE +
Sbjct: 25  PPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVK 84

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTL 366
                P+ I+T    GI +++VS GD H +AL   G V++WGK   G LG G E   +  
Sbjct: 85  GINFTPKKIKTL--TGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDS 142

Query: 367 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           P+ + SL+     QV A    +F L  +G+ +G+G    G L      V  +  +PR + 
Sbjct: 143 PQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIG 202

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           +LR   V  IS G  HT V+T  G++F FGDN   QLGH
Sbjct: 203 ALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGH 241



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 7/237 (2%)

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           VS  + H+  V   G+VF  G  S    G  +     F P+ ++ L G+   QV+ G   
Sbjct: 51  VSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYH 110

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
           +  L+  G V + G N+ GQLG G     + +P+ +  LE +  + Q+AAG ++  A++ 
Sbjct: 111 SLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGI-PLAQVAAGGAHSFALSV 169

Query: 288 NGVVYSFGSGSNFCL---GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +G  + +G+ S   L   G+       +PR+I   R  G  V+ +S G EH   L  +G 
Sbjct: 170 SGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLG--VIYISCGYEHTAVLTQNGK 227

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           V+T+G   CG LGH        P+ +  +   ++   C        +  TG V  FG
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 284



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 21/259 (8%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPL 266
           P  +  L+ +    V+ G   +  +  RG V   G+ + GQLG G+      TPK I  L
Sbjct: 37  PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTL 96

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIH 325
             +  ++Q++ G  + LA++  G V+S+G  S   LG G++   +  P+ +++   +GI 
Sbjct: 97  TGI-KIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSL--EGIP 153

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVC 382
           + +V+AG  H  AL  SG  + WG    G L   G+   +    P  + +L++   + + 
Sbjct: 154 LAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVIYIS 213

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFP----DRGVSDKVLRPRILDSLRAHHVSQIST 438
                T VL   G V+ FG    G LG      DRG       P++++ +    VSQI  
Sbjct: 214 CGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRG-------PQLVERIDG-LVSQIDC 265

Query: 439 GLYHTVV-VTDRGRLFGFG 456
           G YHT+  V   G++  FG
Sbjct: 266 GSYHTLAYVYTTGQVVSFG 284



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 120/240 (50%), Gaps = 17/240 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVSASE 173
           ++ G+ H+L + +   VF+ G+   G LG G    + ++FT  +I   +   ++QVS  +
Sbjct: 51  VSCGQEHSLAVCHRGRVFAWGAGSEGQLGTG--EVKGINFTPKKIKTLTGIKIIQVSCGD 108

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  + + GQVF+ G NS    G          P+ V +L+G+P  QV AG   +  L+
Sbjct: 109 YHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALS 168

Query: 234 IRGHVHTCGSNTHGQL---GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           + G     G+N+ GQL   G+   +    P+SI  L  +G V+ I+ G  +   +T NG 
Sbjct: 169 VSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLG-VIYISCGYEHTAVLTQNGK 227

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V++FG  S   LGH     +  P+ ++  R  G+ V ++  G  H +A     YVYT G+
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRGPQLVE--RIDGL-VSQIDCGSYHTLA-----YVYTTGQ 279


>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 527

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 5/275 (1%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 187
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H A     G+VF+
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATADGEVFS 98

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G+  TN  +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
           Q+G G T ++PTP+ ++   +  +VV IA G    +AV  +G +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNN 218

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            ++  P  I     +G+ V++V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 219 GNQQTPCRIAAL--QGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQALP 276

Query: 368 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
             +++ K  +A V  C     +     +G V  +G
Sbjct: 277 TLINTDKERMAEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 9/237 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP   +A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDALCGKKIVSL-SYGTGPHVAIA-TAD 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V+S+G      LG+G  +  L P  + T    G  V+ V+ G  H +AL + G V+ W
Sbjct: 94  GEVFSWGHNGYSQLGNGTTNHGLTPALVST-NLLGKRVIEVACGSHHTIALTTDGEVFAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G +G G   ++  P  +SS L++   V +   +  +  ++D+G +YG+G+   G 
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYNCNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           LG  + G      R   + +L+   V Q++ G  HT+ +TD G ++ +G N   QLG
Sbjct: 213 LGLGNNGNQQTPCR---IAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLG 266



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FT 229
           ++ N A +V  + +VF  G N S C G  D    I  PR ++AL G     ++ G     
Sbjct: 29  SAANEAIYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDALCGKKIVSLSYGTGPHV 87

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              T  G V + G N + QLG+G T    TP  ++       V+++A G  + +A+T +G
Sbjct: 88  AIATADGEVFSWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDG 147

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++G  ++  +G G   ++  PR + +  +    VV ++ G    +A+  SG +Y WG
Sbjct: 148 EVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKA-VVNIACGQLCSMAVLDSGEIYGWG 206

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               G LG G+  ++  P  +++L+    +QV      T  L D G VY +G   +G LG
Sbjct: 207 YNCNGQLGLGNNGNQQTPCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLG 266


>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
          Length = 385

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 130/274 (47%), Gaps = 8/274 (2%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           FC G    +R + R R   +  G    Q  +G   +  L     V +CG N+ GQLG   
Sbjct: 3   FCWG--ADSRELQRRRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRG 59

Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ 312
                 P+ I  LE +  V  ++ G  + LAV   G V+++G+GS   LG GE +     
Sbjct: 60  AQRGELPEPIQALETL-IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT 118

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLS 371
           P+ I T     I +++VS G  H +AL     V++WGK   G LG G E   +  P+ + 
Sbjct: 119 PKKIMTLND--IKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           SL+     QV A    +F L   G+ +G+G    G L    R V  +  +P  + +L+  
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNL 236

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            V  IS G  HT V+T  G++F FGDN   QLG+
Sbjct: 237 GVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGY 270



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 124/248 (50%), Gaps = 13/248 (5%)

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           L+ V    ++ G      +T  G V+T G   +GQLGHGD +D+  P+ +  ++  G V 
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIK--GEVK 327

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            ++AG  + +AVT +G ++++G G    LGH +    L P  +  F   G+ V    AG 
Sbjct: 328 SVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGG 387

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
            H + L+  G V+++G G  G LGHG++ D+  P  LS+L+S   V + A    +  L D
Sbjct: 388 SHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTD 447

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL-----DSLRAHHVSQISTGLYHTVVVTD 448
            G +Y +G    G LG      SD+VL PR L     D+++A     ++ G  HT +   
Sbjct: 448 QGQIYTWGCGKLGRLGHGSD--SDEVL-PRKLALISHDTIKA---IAVAAGEAHTCIFRS 501

Query: 449 RGRLFGFG 456
            G L   G
Sbjct: 502 EGSLITLG 509



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 109/232 (46%), Gaps = 10/232 (4%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVS--FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           V++ G    G LGHG +  + +     RI       V  VSA   H   V   G +FT G
Sbjct: 294 VYTWGQGRYGQLGHGDDVDKIIPQPVPRIK----GEVKSVSAGFYHTVAVTHHGALFTWG 349

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
           D      GH D  + +  P LV A    G+P     AG + T  L  RG V + GS   G
Sbjct: 350 DGKEGKLGHNDNAQRLI-PTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSG 408

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
           +LGHG+  D+ +P  ++ LE     V IAAG ++ +A+T  G +Y++G G    LGHG  
Sbjct: 409 RLGHGNDNDQWSPTFLSALES-ERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSD 467

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
            DE+ PR +       I  + V+AG+ H     S G + T G+   G +  G
Sbjct: 468 SDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEG 519



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 10/194 (5%)

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++ G  +  AVT  G+VY++G G    LGHG+  D++ P+ +   R KG  V  VSAG  
Sbjct: 278 LSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVP--RIKG-EVKSVSAGFY 334

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK---RKTFVL 391
           H VA+   G ++TWG G  G LGH D   + +P  +++      + V A +     T VL
Sbjct: 335 HTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFI-EWGMPVAAAQAGGSHTLVL 393

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
              G V+ FG    G LG    G  +    P  L +L +     I+ G  H+V +TD+G+
Sbjct: 394 NRRGQVFSFGSGDSGRLG---HGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQ 450

Query: 452 LFGFGDNERAQLGH 465
           ++ +G  +  +LGH
Sbjct: 451 IYTWGCGKLGRLGH 464



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 14/173 (8%)

Query: 321 RKGIHVVR------VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
           R G+ ++R      +S G  H  A+  +G VYTWG+G  G LGHGD++DK +P+P+  +K
Sbjct: 264 RAGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIK 323

Query: 375 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL--RAHH 432
             +   V A    T  +   G+++ +G    G LG  D     + L P ++ +       
Sbjct: 324 GEVK-SVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNA---QRLIPTLVAAFIEWGMP 379

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 485
           V+    G  HT+V+  RG++F FG  +  +LGH        PT  F+  +E +
Sbjct: 380 VAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPT--FLSALESE 430


>gi|213983021|ref|NP_001135671.1| NIMA-related kinase 9 [Xenopus (Silurana) tropicalis]
 gi|197246344|gb|AAI68588.1| Unknown (protein for MGC:185428) [Xenopus (Silurana) tropicalis]
          Length = 924

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++  KG    +QV AG      +T+   ++T      GS  HGQLGHGD      PK
Sbjct: 341 PQKLDVFKGGCRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   SV Q++ G  + + ++  G +YSFGS    CLG  +    + L+P  +  F
Sbjct: 401 HVEKLQG-KSVQQVSCGSDFTVCISDEGQLYSFGSDYYGCLGVNQSAGAEVLEPLLVDFF 459

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
             + +   +VS GD H++AL  S  VY+WG G  G LG   E D   P+ +   +    V
Sbjct: 460 LNEPVE--QVSCGDSHIIALTRSKCVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRDLCIV 517

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 429
            VC     +F+L  TG V   G      LG        ++ +  +         +   L 
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 367
           P+ +  F+  G    +V AGD H   +     +YTW     G    G LGHGD      P
Sbjct: 341 PQKLDVFK-GGCRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
           + +  L+     QV      T  + D G +Y FG   +G LG  ++    +VL P ++D 
Sbjct: 400 KHVEKLQGKSVQQVSCGSDFTVCISDEGQLYSFGSDYYGCLGV-NQSAGAEVLEPLLVDF 458

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
                V Q+S G  H + +T    ++ +G  E  +LG D+      P ++ +Q
Sbjct: 459 FLNEPVEQVSCGDSHIIALTRSKCVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 128/304 (42%), Gaps = 34/304 (11%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 173
           Q++ G   T+ IS+   ++S GS   G LG       + +    ++F     V QVS  +
Sbjct: 412 QVSCGSDFTVCISDEGQLYSFGSDYYGCLGVNQSAGAEVLEPLLVDFFLNEPVEQVSCGD 471

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           +H   + +S  V++ G      CG       D+   ++ P+ VE  + +    V  G + 
Sbjct: 472 SHIIALTRSKCVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRDLCIVNVCCGSDG 525

Query: 229 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 276
           +  LT+ G V  CG N H +LG          H    + P   S+   +++    +  I+
Sbjct: 526 SFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSIS 585

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G ++  A+   G + +FGS     LG G+    L    +      G  V+RVS GDE  
Sbjct: 586 PGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQVIRVSCGDEFT 644

Query: 337 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           +A  +  +++ WG G  G L         G +I  + P P+     H+    C R   T 
Sbjct: 645 IAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTDLSC-RGWHTI 703

Query: 390 VLVD 393
           ++V+
Sbjct: 704 LIVE 707



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/333 (24%), Positives = 137/333 (41%), Gaps = 24/333 (7%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           GS L G LGHG   +       +       V QVS   +    +   GQ+++ G +   C
Sbjct: 381 GSKLHGQLGHGDRASY-RQPKHVEKLQGKSVQQVSCGSDFTVCISDEGQLYSFGSDYYGC 439

Query: 196 CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
            G ++     +  P LV+     P +QV+ G +    LT    V++ G   +G+LG    
Sbjct: 440 LGVNQSAGAEVLEPLLVDFFLNEPVEQVSCGDSHIIALTRSKCVYSWGCGEYGRLGLDSE 499

Query: 255 LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE------QH 308
            D  +P+ +    ++  +V +  G      +T  G V + G   +  LG  +       H
Sbjct: 500 DDVYSPQKVEVQRDL-CIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINH 558

Query: 309 DELQP----RAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
           +  Q      ++   ++   + +R +S G  H  A+D  G + T+G   CG LG GD   
Sbjct: 559 EAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGD-YR 617

Query: 364 KTLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-PD---RGVSD 417
           K L   L    L     ++V      T        ++ +G  G G L   P+   +G   
Sbjct: 618 KHLGINLLGGPLGGKQVIRVSCGDEFTIAATADNHIFAWGNGGNGRLAMTPNERPQGSDI 677

Query: 418 KVLRPR-ILDSLRAHHVSQISTGLYHTVVVTDR 449
               PR I  SL  HHV+ +S   +HT+++ ++
Sbjct: 678 CTSWPRPIFGSL--HHVTDLSCRGWHTILIVEK 708


>gi|444912395|ref|ZP_21232559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444716977|gb|ELW57814.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 391

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 155/357 (43%), Gaps = 19/357 (5%)

Query: 123 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL +  + +V++ G +  G LG G   ++    T    P  + V+ V+A  NH+  +  
Sbjct: 49  HTLALRYDGTVWAWGENGNGELGDGTTLSRS---TPAQVPGLSGVLAVAAGRNHSLVLRV 105

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
            G V+  G NSS   G+  T   +  P  V  L GV      A  +F   L   G V   
Sbjct: 106 DGTVWAWGGNSSGQLGNGTTTSSLV-PLQVPGLGGVKAIAAVAYSSFA--LLSDGTVRAW 162

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           G N  G LG G T DR TP    P+  +   V IAAG  +  AV  NG V  +G      
Sbjct: 163 GRNGFGVLGDGTTSDRYTP---VPVLNLSQAVSIAAGGDHAFAVLANGTVMGWGYNYFGQ 219

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           +G G       P  ++     G+  V V  G    VA  S G V++WG  + G LG G  
Sbjct: 220 VGDGTTISRTAPVPVKNL--TGVSAVSV-MGSNSSVARKSDGTVWSWGDNWVGQLGVGSA 276

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
           +  T P P+       AV + +       L+  G++ G+G+  +G LG    G +     
Sbjct: 277 V-STSPTPVQVPGITTAVAIQSGVGHGMALLADGTLKGWGYNLYGQLG---DGTTRTRYT 332

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           P ++  L    V  ++ G  H++ VT  G+++ +GDN +  LG  T    L P  + 
Sbjct: 333 PVLVPGL--AQVVHLAAGTLHSLAVTADGKVWAWGDNAQGTLGDGTTTQRLAPVTVV 387



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 133/311 (42%), Gaps = 23/311 (7%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           A+++H   +   G V+  G+N +   G   T      P  V  L GV    V AG N + 
Sbjct: 45  AADDHTLALRYDGTVWAWGENGNGELGD-GTTLSRSTPAQVPGLSGVLA--VAAGRNHSL 101

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGN 288
            L + G V   G N+ GQLG+G T       S+ PL+   +G V  IAA      A+  +
Sbjct: 102 VLRVDGTVWAWGGNSSGQLGNGTTT-----SSLVPLQVPGLGGVKAIAAVAYSSFALLSD 156

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V ++G      LG G   D   P  +    +     V ++AG +H  A+ ++G V  W
Sbjct: 157 GTVRAWGRNGFGVLGDGTTSDRYTPVPVLNLSQA----VSIAAGGDHAFAVLANGTVMGW 212

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG--WMGFG 406
           G  Y G +G G  I +T P P+ +L    AV V           D G+V+ +G  W+G  
Sbjct: 213 GYNYFGQVGDGTTISRTAPVPVKNLTGVSAVSVMGSNSSVARKSD-GTVWSWGDNWVGQL 271

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            +G         V  P I  ++       I +G+ H + +   G L G+G N   QLG  
Sbjct: 272 GVGSAVSTSPTPVQVPGITTAV------AIQSGVGHGMALLADGTLKGWGYNLYGQLGDG 325

Query: 467 TLRGCLEPTEI 477
           T R    P  +
Sbjct: 326 TTRTRYTPVLV 336



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 16/207 (7%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G  H   +++N +V   G +  G +G G   ++       N  +    V V  S 
Sbjct: 191 VSIAAGGDHAFAVLANGTVMGWGYNYFGQVGDGTTISRTAPVPVKNL-TGVSAVSVMGSN 249

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           +  A     G V++ GDN     G       +  P+  P +  A+       + +G+   
Sbjct: 250 SSVAR-KSDGTVWSWGDNWVGQLGVGSAVSTSPTPVQVPGITTAVA------IQSGVGHG 302

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             L   G +   G N +GQLG G T  R TP  +  L +V   V +AAG  + LAVT +G
Sbjct: 303 MALLADGTLKGWGYNLYGQLGDGTTRTRYTPVLVPGLAQV---VHLAAGTLHSLAVTADG 359

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAI 316
            V+++G  +   LG G     L P  +
Sbjct: 360 KVWAWGDNAQGTLGDGTTTQRLAPVTV 386



 Score = 43.9 bits (102), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 5/141 (3%)

Query: 128 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
           S+ +V+S G +  G LG G   +   S T +  P     V + +   H   +L  G +  
Sbjct: 256 SDGTVWSWGDNWVGQLGVGSAVS--TSPTPVQVPGITTAVAIQSGVGHGMALLADGTLKG 313

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G   T R  + P LV  L  V    + AG   +  +T  G V   G N  G
Sbjct: 314 WGYNLYGQLGD-GTTRTRYTPVLVPGLAQV--VHLAAGTLHSLAVTADGKVWAWGDNAQG 370

Query: 248 QLGHGDTLDRPTPKSIAPLEE 268
            LG G T  R  P ++  L +
Sbjct: 371 TLGDGTTTQRLAPVTVVGLPQ 391


>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
          Length = 596

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 5/227 (2%)

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           ++CG N+ GQLG         P+ I  L ++  V  ++ G  + +AV   G V+ +G+GS
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDL-HVDLVSCGKEHSVAVCHKGKVFPWGAGS 59

Query: 299 NFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              LG GE +     P  I+     GI +++VS G  H +AL   G+V++WG+   G LG
Sbjct: 60  EGQLGIGEFKEISFMPTKIKAL--AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 117

Query: 358 HG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
            G +   + +P+ + SL+     QV A    +F L  TG+ +G+G    G L      V 
Sbjct: 118 LGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVK 177

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
           +++ +P  + +L+   V  IS G  HT V+T+ G++F FG N   QL
Sbjct: 178 EQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQL 224



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 124/282 (43%), Gaps = 26/282 (9%)

Query: 133 FSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           +SCG +  G LG         PE  Q ++          HV  VS  + H+  V   G+V
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALN--------DLHVDLVSCGKEHSVAVCHKGKV 52

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           F  G  S    G  +     F P  ++AL G+   QV+ G   +  L+  GHV + G N+
Sbjct: 53  FPWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNS 112

Query: 246 HGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN----F 300
            GQLG G ++  +  P+ +  LE +  + Q+AAG ++  A++  G   SFG GSN     
Sbjct: 113 EGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGGTHSFALSLTGT--SFGWGSNRSGQL 169

Query: 301 CLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
            L   +  +++ +P +I     K + V+ +S G EH   L   G V+T+G    G L   
Sbjct: 170 ALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPS 227

Query: 360 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
               +  P+ +  +   ++   CA       +  TG V   G
Sbjct: 228 PRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 269



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 13/238 (5%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G+ H++ + +   VF  G+   G LG G         T+I   +   ++QVS    H
Sbjct: 36  VSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYH 95

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  + + G VF+ G NS    G    +R    P+ V++L+G+P  QV AG   +  L++ 
Sbjct: 96  SLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLT 155

Query: 236 GHVHTCGSNTHGQLG-HGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           G     GSN  GQL   G+ +      P SI  L+ + SV+ I+ G  +   +T  G V+
Sbjct: 156 GTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNL-SVIYISCGYEHTAVLTEEGQVF 214

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           +FG  S+  L    +  +  P+ I+     G  V ++     H +A     YVYT G+
Sbjct: 215 TFGGNSSGQLQPSPRSGQRGPQLIEGI---GGRVSQIECASYHTIA-----YVYTTGQ 264



 Score = 48.1 bits (113), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 4/120 (3%)

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           Y+ G    G LG   +     PEP+ +L   H+ +  C  K  +  +   G V+ +G   
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCG-KEHSVAVCHKGKVFPWGAGS 59

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG  +    +    P  + +L    + Q+S G YH++ +++ G +F +G N   QLG
Sbjct: 60  EGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG 117


>gi|315506657|ref|YP_004085544.1| hyalin [Micromonospora sp. L5]
 gi|315413276|gb|ADU11393.1| Hyalin [Micromonospora sp. L5]
          Length = 1017

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 172/372 (46%), Gaps = 34/372 (9%)

Query: 117  ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            +  G+ H+L +++    S  G +L G LG+G   ++    T +     + ++ VS+ +  
Sbjct: 661  VAAGKGHSLAVNDDDTVSAWGDNLLGQLGNGSIFSET---TAVPVSGLSGILAVSSGDAS 717

Query: 176  AAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            +  + +SG V + G+N       G R  +R   RP  V+ L G   KQ+ AG +    L 
Sbjct: 718  SYALTRSGVVHSWGENLLGQLGNGSRLQSR---RPVQVDGLTG--AKQIAAGNDHVLALK 772

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-----YMLAVTGN 288
              G V   GSN  GQLG    L    P ++  L    SVVQ+AAG +     + +A+ G+
Sbjct: 773  SDGTVAAWGSNLAGQLGRTGVLSATKPAAVPGLT---SVVQVAAGGTPGLAGHSVALKGD 829

Query: 289  GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
            G V+++G G N  LG G+      P  +        +VV ++A   +  AL S G V+ W
Sbjct: 830  GTVWTWGHGLNGQLGLGDHRSTATPTQVPGLS----NVVLIAADGNNTYALKSDGTVWAW 885

Query: 349  GKGYCGALGHGDEI-DKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGF 405
            G G  G +G+ D    +T P     LK +++  V + A       +   G+V+G+G    
Sbjct: 886  GDGNHGQIGNPDATHSQTTP-----LKVNISGVVSIDAGSTTAMAVKGDGTVWGWGSNAS 940

Query: 406  GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            G LG  DR        P     L       I++GL H++VV   G + G+G N   QLG+
Sbjct: 941  GQLG-DDRDCGLHCSTPVKASGLTG--AGWIASGLLHSLVVNTDGNVHGYGGNLLGQLGN 997

Query: 466  DTLRGCLEPTEI 477
             T +G   PT +
Sbjct: 998  GTRKGATTPTTV 1009



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 116/271 (42%), Gaps = 27/271 (9%)

Query: 116  QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS- 172
            QI  G  H L L S+ +V + GS+L G LG     T  +S T+    P    VVQV+A  
Sbjct: 760  QIAAGNDHVLALKSDGTVAAWGSNLAGQLGR----TGVLSATKPAAVPGLTSVVQVAAGG 815

Query: 173  ----ENHAAFVLQSGQVFTCGD--NSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAG 225
                  H+  +   G V+T G   N     G HR T  P   P L   +       + A 
Sbjct: 816  TPGLAGHSVALKGDGTVWTWGHGLNGQLGLGDHRSTATPTQVPGLSNVV------LIAAD 869

Query: 226  LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLA 284
             N T  L   G V   G   HGQ+G+ D     T     PL+  +  VV I AG +  +A
Sbjct: 870  GNNTYALKSDGTVWAWGDGNHGQIGNPDA----THSQTTPLKVNISGVVSIDAGSTTAMA 925

Query: 285  VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            V G+G V+ +GS ++  LG            ++     G     +++G  H + +++ G 
Sbjct: 926  VKGDGTVWGWGSNASGQLGDDRDCGLHCSTPVKASGLTGAG--WIASGLLHSLVVNTDGN 983

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
            V+ +G    G LG+G     T P  +S + +
Sbjct: 984  VHGYGGNLLGQLGNGTRKGATTPTTVSGVTA 1014



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 7/154 (4%)

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
           I+   V+AG  H +A++    V  WG    G LG+G    +T   P+S L   LAV   +
Sbjct: 656 IYAPPVAAGKGHSLAVNDDDTVSAWGDNLLGQLGNGSIFSETTAVPVSGLSGILAVS--S 713

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
               ++ L  +G V+ +G    G LG    G   +  RP  +D L      QI+ G  H 
Sbjct: 714 GDASSYALTRSGVVHSWGENLLGQLG---NGSRLQSRRPVQVDGLTG--AKQIAAGNDHV 768

Query: 444 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           + +   G +  +G N   QLG   +    +P  +
Sbjct: 769 LALKSDGTVAAWGSNLAGQLGRTGVLSATKPAAV 802



 Score = 38.5 bits (88), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 6/145 (4%)

Query: 126  LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
            L S+ +V++ G    G +G+   T    +  ++N    + VV + A    A  V   G V
Sbjct: 876  LKSDGTVWAWGDGNHGQIGNPDATHSQTTPLKVNI---SGVVSIDAGSTTAMAVKGDGTV 932

Query: 186  FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            +  G N+S   G  RD       P     L G     + +GL  +  +   G+VH  G N
Sbjct: 933  WGWGSNASGQLGDDRDCGLHCSTPVKASGLTG--AGWIASGLLHSLVVNTDGNVHGYGGN 990

Query: 245  THGQLGHGDTLDRPTPKSIAPLEEV 269
              GQLG+G      TP +++ +  V
Sbjct: 991  LLGQLGNGTRKGATTPTTVSGVTAV 1015


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           G    Q  +G   +  L     V +CG N+ GQLG         P+ I  LE +  V  +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           + G  + LAV   G V+++G+GS   LG GE +     P+ I T     I +++VS G  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+T  G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 454 GFGDNERAQLGH 465
            FGDN   QLG+
Sbjct: 259 TFGDNRSGQLGY 270



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 852

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 147/324 (45%), Gaps = 32/324 (9%)

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           V+    H   +   G V+  G N     G    TNRP+  P  V  L G+  + V A  +
Sbjct: 145 VAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPV--PVQVGGLSGI--RAVAASSD 200

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  +   G V   G N+ GQLG G T DR TP  +A L    S+ ++AAG  Y LAV G
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPVQVAGLS---SIKRVAAGDGYSLAVHG 257

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSA------GDEHVVALD 340
           +G V+++G  S+  LG G   D L P      R KG+  VV VSA      G  HV+A+ 
Sbjct: 258 DGTVWAWGINSSGQLGDGTTTDRLTPG-----RVKGLSEVVEVSAAKYSLLGSAHVLAVR 312

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-------CARKRKTFVLVD 393
             G V+ WG    G LG G   D+  P  +S L    A+ V        +    +  +  
Sbjct: 313 GDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRG 372

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            G+V+ +G    G LG    G +    RP  +++L    ++ +S    H + + D G ++
Sbjct: 373 DGTVWAWGSNSTGQLG---DGTTISRSRPAQVNALSG--ITAVSASSDHALAMRDDGTVW 427

Query: 454 GFGDNERAQLGHDTLRGCLEPTEI 477
            +G N   +LG +T    L P ++
Sbjct: 428 SWGKNTNGKLGDETTAHRLIPVQV 451



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 164/368 (44%), Gaps = 35/368 (9%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H++ +  +   ++ G    G+LG G      +SF  +         Q+++  N 
Sbjct: 460 VAAGESHSVSVREDGKAWAWGYRGMGLLGDG---AMFLSFVPVQTMGLTATAQIASHGNR 516

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           +  V +   ++  G +S    G   T   P+    L +       K V AG +++  +  
Sbjct: 517 SLAVKEDNTLWVWGSSSLGDLGDGSTGAHPVPSSILDD------VKAVAAGNDYSLAVRN 570

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G +   GSN+ GQLG G T +R TP  +  LE V   V  AA  S  LA+  +G V+++
Sbjct: 571 NGSLWAWGSNSIGQLGDGSTTNRLTPVPVNGLENV---VGAAASFSVSLALRSDGTVWAW 627

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G  S   LG G   +   P  +       +H+V V+    H +AL + G V+ WG  + G
Sbjct: 628 GLNSVGQLGDGSTINRSTPGPVGGL----VHIVGVATSGGHSLALRNDGTVWAWGGNHDG 683

Query: 355 ALGHGDEIDKTLPEP-----LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            LG G   ++  P+P     LS +K+  A  V +   +     D G+V+ +G    G LG
Sbjct: 684 QLGDGTTTNQ--PKPVQVSGLSGVKAVAAAIVSSAVVR-----DNGTVWAWGDNYSGQLG 736

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
               G +   L P ++  L    V  +++G +H + + + G ++ +GDN  +QLG  T  
Sbjct: 737 ---DGTTTDRLTPVLVSGLSG--VKALASGNHHFLALRNDGTVWAWGDNYYSQLGDGTRT 791

Query: 470 GCLEPTEI 477
               P ++
Sbjct: 792 QRSTPVQV 799



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 138/303 (45%), Gaps = 31/303 (10%)

Query: 123 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           H+L +  + +V++ G +  G LG G   T     T +     + + +V+A + ++  V  
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDG---TTNDRLTPVQVAGLSSIKRVAAGDGYSLAVHG 257

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG----LNFTGFLTIRGH 237
            G V+  G NSS   G   T   +  P  V+ L  V   +V+A     L     L +RG 
Sbjct: 258 DGTVWAWGINSSGQLGDGTTTDRL-TPGRVKGLSEV--VEVSAAKYSLLGSAHVLAVRGD 314

Query: 238 --VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP------SYMLAVTGNG 289
             V   G+N  GQLG G T DR TP  ++ L+ V ++    + P      SY LAV G+G
Sbjct: 315 GTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRGDG 374

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++GS S   LG G      +P  +         +  VSA  +H +A+   G V++WG
Sbjct: 375 TVWAWGSNSTGQLGDGTTISRSRPAQVNALS----GITAVSASSDHALAMRDDGTVWSWG 430

Query: 350 KGYCGALGHGDEIDKTLP---EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           K   G LG      + +P     LS ++S     V A +  +  + + G  + +G+ G G
Sbjct: 431 KNTNGKLGDETTAHRLIPVQVHGLSGVRS-----VAAGESHSVSVREDGKAWAWGYRGMG 485

Query: 407 SLG 409
            LG
Sbjct: 486 LLG 488



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 113/246 (45%), Gaps = 17/246 (6%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S+ +V++ G +  G LG G    +    T        H+V V+ S  H+  +   G V
Sbjct: 618 LRSDGTVWAWGLNSVGQLGDGSTINRS---TPGPVGGLVHIVGVATSGGHSLALRNDGTV 674

Query: 186 FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +  G N     G    TN+P  +P  V  L GV  K V A +  +  +   G V   G N
Sbjct: 675 WAWGGNHDGQLGDGTTTNQP--KPVQVSGLSGV--KAVAAAIVSSAVVRDNGTVWAWGDN 730

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
             GQLG G T DR TP  ++ L     V  +A+G  + LA+  +G V+++G      LG 
Sbjct: 731 YSGQLGDGTTTDRLTPVLVSGLS---GVKALASGNHHFLALRNDGTVWAWGDNYYSQLGD 787

Query: 305 GEQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
           G +     P  +     +G+  V+ ++AG+ H +A+   G V+TWG    G LG+G    
Sbjct: 788 GTRTQRSTPVQV-----RGLSDVKLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNGLLDF 842

Query: 364 KTLPEP 369
             LP P
Sbjct: 843 SALPVP 848



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 173/431 (40%), Gaps = 70/431 (16%)

Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPET-----TQCV 153
           V+  S++VE SA     +  G  H L +  + +V++ G++  G LG G  T      Q  
Sbjct: 286 VKGLSEVVEVSAAKYSLL--GSAHVLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVS 343

Query: 154 SFTRINFPSAAHVVQVSASENHAAFVLQ-SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 212
               +   +  +   +S S    +  ++  G V+  G NS+   G   T     RP  V 
Sbjct: 344 ELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLGD-GTTISRSRPAQVN 402

Query: 213 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           AL G+    V+A  +    +   G V + G NT+G+LG   T  R  P  +  L  V SV
Sbjct: 403 ALSGITA--VSASSDHALAMRDDGTVWSWGKNTNGKLGDETTAHRLIPVQVHGLSGVRSV 460

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF------------- 319
              AAG S+ ++V  +G  +++G      LG G       P  +QT              
Sbjct: 461 ---AAGESHSVSVREDGKAWAWGYRGMGLLGDGAMFLSFVP--VQTMGLTATAQIASHGN 515

Query: 320 ------------------------RRKGIH---------VVRVSAGDEHVVALDSSGYVY 346
                                      G H         V  V+AG+++ +A+ ++G ++
Sbjct: 516 RSLAVKEDNTLWVWGSSSLGDLGDGSTGAHPVPSSILDDVKAVAAGNDYSLAVRNNGSLW 575

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
            WG    G LG G   ++  P P++ L++   V   A    +  L   G+V+ +G    G
Sbjct: 576 AWGSNSIGQLGDGSTTNRLTPVPVNGLEN--VVGAAASFSVSLALRSDGTVWAWGLNSVG 633

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG    G +     P  +  L   H+  ++T   H++ + + G ++ +G N   QLG  
Sbjct: 634 QLG---DGSTINRSTPGPVGGLV--HIVGVATSGGHSLALRNDGTVWAWGGNHDGQLGDG 688

Query: 467 TLRGCLEPTEI 477
           T     +P ++
Sbjct: 689 TTTNQPKPVQV 699



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 127/306 (41%), Gaps = 24/306 (7%)

Query: 105 DIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
           D+   +AGN        Y   + +N S+++ GS+  G LG G  T +    T +      
Sbjct: 554 DVKAVAAGND-------YSLAVRNNGSLWAWGSNSIGQLGDGSTTNR---LTPVPVNGLE 603

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT 223
           +VV  +AS + +  +   G V+  G NS    G   T NR    P  V  L  +     +
Sbjct: 604 NVVGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGSTINRST--PGPVGGLVHIVGVATS 661

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G +    L   G V   G N  GQLG G T ++P P  ++ L  V +V           
Sbjct: 662 GGHSLA--LRNDGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKAVAAAIV---SSA 716

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
            V  NG V+++G   +  LG G   D L P  +         V  +++G+ H +AL + G
Sbjct: 717 VVRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLVSGLS----GVKALASGNHHFLALRNDG 772

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            V+ WG  Y   LG G    ++ P  +  L       + A +  +  +   G+V+ +G  
Sbjct: 773 TVWAWGDNYYSQLGDGTRTQRSTPVQVRGLSD--VKLIAAGENHSMAVRKDGTVWTWGLN 830

Query: 404 GFGSLG 409
             G LG
Sbjct: 831 TSGQLG 836


>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
 gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
          Length = 611

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 161/373 (43%), Gaps = 47/373 (12%)

Query: 128 SNSSVFSCGSSLCGVLGHGP----ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 183
           + + +FS G +  G L  G      T   V   RIN     HVV V+        + ++G
Sbjct: 28  NRAGLFSFGQNTYGELALGDTNDRSTPTRVDLGRIN--DTKHVVDVACGNEQTTILFENG 85

Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-------FTG------ 230
            VFTCG N S  C    T R             VP  + + GL+       F+G      
Sbjct: 86  DVFTCGYNDSGQCAIGTTER-------------VPSLRFSPGLSSHHTVRLFSGNGSEHL 132

Query: 231 -FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGPSYMLAVTG 287
             L   G ++T G N  GQLG G      T      +EE+    VV +A    +   V  
Sbjct: 133 AALCANGFLYTVGFNMRGQLGLGTAT---TVTEATLVEELAGKRVVDVACSYFHTAIVMD 189

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           NG +++ G      LG G+    L PR +  F R    V+ V+ G  + VA    G V  
Sbjct: 190 NGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHP--VLAVACGQHYTVASLRDGGVVA 247

Query: 348 WGKGYCGALGHGDEIDKT--LPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +GK   G LG  D + +   LP  L+  L   +  Q+      T ++ + G+VY FG   
Sbjct: 248 FGKNDHGQLGL-DRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRND 306

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +G LG    G    + RP  ++SL    ++Q++ G YHT+ ++D G++F FG N   QLG
Sbjct: 307 YGQLGL---GHKLHMARPTPVESLSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLG 363

Query: 465 HDTLRGCLEPTEI 477
            +T   CL P  I
Sbjct: 364 LETSMDCLSPQLI 376



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 151/355 (42%), Gaps = 24/355 (6%)

Query: 97  LQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 156
           L  +  +  +V+ + GN+         T+L  N  VF+CG +  G    G  TT+ V   
Sbjct: 59  LGRINDTKHVVDVACGNEQT-------TILFENGDVFTCGYNDSGQCAIG--TTERVPSL 109

Query: 157 RINFP--SAAHVVQVSASE--NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 212
           R + P  S+ H V++ +     H A +  +G ++T G N     G   T   +    LVE
Sbjct: 110 RFS-PGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMRGQLG-LGTATTVTEATLVE 167

Query: 213 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
            L G     V      T  +   G +H CG N +GQLG GD      P+ +        V
Sbjct: 168 ELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFR-HPV 226

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSA 331
           + +A G  Y +A   +G V +FG   +  LG     +  L P  +     + + V ++S 
Sbjct: 227 LAVACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTRLAPPLDRAV-VPQLSC 285

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           G  H   +   G VYT+G+   G LG G ++    P P+ SL      QV      T  L
Sbjct: 286 GYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLAL 345

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            D G V+ FG    G LG      S   L P+++ +LR      ++ G YH+V +
Sbjct: 346 SDDGKVFPFGRNNHGQLGLE---TSMDCLSPQLISTLRN---KPVAAGFYHSVCL 394


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           G    Q  +G   +  L     V +CG N+ GQLG         P+ I  LE +  V  +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           + G  + LAV   G V+++G+GS   LG GE +     P+ I T     I +++VS G  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+T  G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 454 GFGDNERAQLGH 465
            FGDN   QLG+
Sbjct: 259 TFGDNRSGQLGY 270



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
           purpuratus]
          Length = 946

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 134/290 (46%), Gaps = 24/290 (8%)

Query: 204 PI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 262
           PI F+  L   LK    +QV         +T    V++ G  + GQLGHGD   R  P S
Sbjct: 66  PIPFKIELPTILK---IRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLDPRNVPTS 122

Query: 263 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           +  L+   S+ ++A G  + +  + NG+V + G GS  CLGHG+ H   +PR I+T    
Sbjct: 123 VEALK-GKSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLL-- 179

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ- 380
            + V  +S G EHVV +   G ++ WGKG  G LG GDE D    EP+  +L+  + +Q 
Sbjct: 180 SVDVTSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEED--FCEPMEVTLRDPVFIQE 237

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR-----GVSDKVLR--------PRILDS 427
           V      T  L D G +   G   +  LG   R      + +   +        P  + +
Sbjct: 238 VKCGVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKA 297

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           L    V  +  G +H+ VV + G ++ FG N+  QLG    +    P ++
Sbjct: 298 LSKFRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQV 347



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 24/343 (6%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           +I  P+   + QV+ S  H A V     V++ G+ S    GH D + P   P  VEALKG
Sbjct: 70  KIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLD-PRNVPTSVEALKG 128

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
               +V  G  F+ F +  G V TCG  + G LGHGD      P+ I  L  V  V  I+
Sbjct: 129 KSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSV-DVTSIS 187

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            GP +++ V  +G ++++G G +  LG G++ D  +P  ++   R  + +  V  G +  
Sbjct: 188 CGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEP--MEVTLRDPVFIQEVKCGVDGT 245

Query: 337 VALDSSGYVYTWGKGYCGALG---------------HGDEID-KTLPEPLSSLKSHLAVQ 380
           + L   G +   G      LG                  E++ + +P  + +L     + 
Sbjct: 246 MFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFRVLD 305

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
           +      + V+V+ G VY FG    G LGF   G +     P  + ++    +S ++ G 
Sbjct: 306 MVVGPHHSAVVVEPGLVYMFGKNQHGQLGF---GNTKPREAPAQVQTMADKLISTVACGE 362

Query: 441 YHTVVVTDRGRLFGFGDNE-RAQLGHDTLRGCLEPTEIFIQEM 482
            +TV       L+ +G     +  G+D+ +  LE ++   QE+
Sbjct: 363 DYTVAGAMDNFLYLWGKGWLTSDPGNDSTQSSLELSQPKGQEV 405



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 98/252 (38%), Gaps = 45/252 (17%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASENHAAFVLQSGQVFT 187
           N  V +CG    G LGHG       S  R I    +  V  +S    H   V   G++F 
Sbjct: 147 NGIVMTCGDGSTGCLGHG--DYHSASRPRLIETLLSVDVTSISCGPEHVVGVGVDGEIFA 204

Query: 188 ----------CGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
                      GD   FC     T R P+F             ++V  G++ T FLT  G
Sbjct: 205 WGKGKDGRLGLGDEEDFCEPMEVTLRDPVF------------IQEVKCGVDGTMFLTDMG 252

Query: 237 HVHTCGSNTHGQLG----------------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
            +  CGSN + +LG                  +   R  P ++  L +   V+ +  GP 
Sbjct: 253 CLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKF-RVLDMVVGPH 311

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           +   V   G+VY FG   +  LG G       P  +QT   K I    V+ G+++ VA  
Sbjct: 312 HSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLIST--VACGEDYTVAGA 369

Query: 341 SSGYVYTWGKGY 352
              ++Y WGKG+
Sbjct: 370 MDNFLYLWGKGW 381


>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
          Length = 527

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 5/285 (1%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 187
           N  VF+ G++  G LG G +T   +   RI+      ++ +S  +  H       G+V+ 
Sbjct: 40  NDEVFALGTNCSGCLGLG-DTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYA 98

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G+  TN  +    +   L G    +V+ G + T  LT  G V+  G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSG 158

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  NG  Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNN 218

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            ++  P  I     +GI++++V+ G  H +AL   G+VY+WG    G LG G++ ++ +P
Sbjct: 219 GNQQTPCRIAAL--QGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNKSNQAVP 276

Query: 368 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             ++  K  +  V  C     +     +G V  +G     ++ +P
Sbjct: 277 TLINMDKERMVEVAACHTSHTSAAKTQSGQVLMWGQCRGQAVAYP 321



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 9/237 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T+   V   G+N  G LG GDT     P+ I  L  +++ S+     GP  ++A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISL-SYGTGPHVVIA-TAD 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY++G      LG+G  +  L P  + T    G  V  VS G  H +AL + G VY W
Sbjct: 94  GEVYAWGHNGYSQLGNGTTNHGLTPALVST-NLIGKRVTEVSCGSHHTIALTTDGEVYAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G +G G   ++  P  +SS L++ + V +   +  +  ++D G  YG+G+   G 
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYNCNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           LG  + G      R   + +L+  ++ Q++ G  HT+ +TD G ++ +G N   QLG
Sbjct: 213 LGLGNNGNQQTPCR---IAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLG 266



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 9/243 (3%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           ++ N A +V  + +VF  G N S C G  DT   I  PR ++ L G     ++ G   TG
Sbjct: 29  SAANEAIYVTVNDEVFALGTNCSGCLGLGDTQSTI-EPRRIDILCGKKIISLSYG---TG 84

Query: 231 ----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
                 T  G V+  G N + QLG+G T    TP  ++       V +++ G  + +A+T
Sbjct: 85  PHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALVSTNLIGKRVTEVSCGSHHTIALT 144

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G VY++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  +G  Y
Sbjct: 145 TDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKV-VVNIACGQLCSMAVLDNGETY 203

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
            WG    G LG G+  ++  P  +++L+    +QV      T  L D G VY +G   +G
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYG 263

Query: 407 SLG 409
            LG
Sbjct: 264 QLG 266


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 8/247 (3%)

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G +++CG N++G+LG GD ++R    S+ PL     + Q+ +G   +  +T +GVV + G
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSV-PLCGWDHIRQVVSGNEILAILTSDGVVLTCG 406

Query: 296 SGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
              +   GHG   DE  +  R IQ  R   +  +  S G EH++A+  +G  Y+WG    
Sbjct: 407 LNKSGQCGHG-NFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465

Query: 354 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
           G LGH +   K  LP+ + S+K             + ++  +G +Y FG    G LG   
Sbjct: 466 GQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDH 525

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
              +     P+++ +L  HHVS +S GLYH V+ T  G +F  G N+  QLG    +   
Sbjct: 526 ---TQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVK 582

Query: 473 EPTEIFI 479
            PT++ +
Sbjct: 583 VPTQVVL 589



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 154/354 (43%), Gaps = 24/354 (6%)

Query: 126  LISNSSVFSCGSSLCG--VLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 183
            +     +FSCG +  G   LGH   T +     R +F S   +  ++        +++ G
Sbjct: 3129 MFEECEIFSCGQNNYGELCLGHCNPTNK---LERASFFSYKSIQSIAGGNEVLVVLMKDG 3185

Query: 184  QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTC 241
             VFTCG N S  CG  + +  +  P  + AL G+P   V A       L I   G V++ 
Sbjct: 3186 AVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSW 3245

Query: 242  GSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
            G N  GQLG G T+ +  TP+ I  L E   +   A    +   V+ NG + +FG   + 
Sbjct: 3246 GYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSG 3305

Query: 301  CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG--H 358
             LG      +  P+ ++T   +   V RV+ G  H VA+   G VY++GK   G LG  H
Sbjct: 3306 QLGLDHTQHQHTPQLVETLSSQ--KVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSH 3363

Query: 359  GDEID-----KTLPEPLSSLKSHL--AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
                      K  P P + +   +  AVQV      T  +++ G V  +G   +G LG  
Sbjct: 3364 TQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIG 3423

Query: 412  DRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             +   S     P  L S     V + S G YHT+++   GR   FG N + QLG
Sbjct: 3424 SKEHKSIAQFVPLPLTS----RVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLG 3473



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 149/337 (44%), Gaps = 11/337 (3%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           ++SCG +  G LG G +  +    T +      H+ QV +     A +   G V TCG N
Sbjct: 350 LYSCGQNSYGELGLGDDIERH-QLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCGLN 408

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNTHGQL 249
            S  CGH + +  +   R ++AL+    K + A  G      +T  G  ++ G N  GQL
Sbjct: 409 KSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQL 468

Query: 250 GHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
           GH +   +   PK I  ++E   +   A    +   V+ +G +Y+FG      LG     
Sbjct: 469 GHENVGTKLYLPKLIESIKE-KKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQ 527

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
            +  P+ ++     G HV  VS G  H+V    SG V+T GK   G LG G      +P 
Sbjct: 528 HQSTPQLVKALL--GHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPT 585

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
            +  L + L   V         +  TG  Y FG   +G LG   +   +  +   I  + 
Sbjct: 586 QV-VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNT 644

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           R  H    + G YHT++++D G++F FG N + QLG+
Sbjct: 645 RMVHA---ACGCYHTLLMSDSGQVFVFGRNNKGQLGN 678



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 16/340 (4%)

Query: 125 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQS 182
           +L S+  V +CG +  G  GHG    + +    I    +  V  ++AS    H   +  +
Sbjct: 395 ILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDT 454

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           G  ++ G N     GH +    ++ P+L+E++K    K      + +  +++ G ++T G
Sbjct: 455 GLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFG 514

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
            N  GQLG   T  + TP+ +  L  +G  V  ++ G  +M+  T +G V++ G   +  
Sbjct: 515 MNDCGQLGLDHTQHQSTPQLVKAL--LGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQ 572

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LG G  H++      Q      + V  V+ G  H  A+ S+G  Y++G+   G LG G +
Sbjct: 573 LGLG--HNKQVKVPTQVVLPNEL-VCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSK 629

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV-- 419
           I + +P  L+   +   V        T ++ D+G V+ FG    G LG  +RG +D +  
Sbjct: 630 IHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLG--NRGNTDSLLP 687

Query: 420 --LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
             L+ R   ++R      I+ G Y T ++ +R R    GD
Sbjct: 688 VPLKVRPEKNMR--RCLHIAAGFYTTSLIVERKRENDEGD 725



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 161/379 (42%), Gaps = 24/379 (6%)

Query: 125  LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE--NHAAFVLQS 182
            +L+ + +VF+CG +  G  G G    + +  + I   S   +  V+AS    H   +   
Sbjct: 3180 VLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHD 3239

Query: 183  GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA-GLNFTGFLTIRGHVHTC 241
            G V++ G N     G   T      PR++E+L+        A   + +  ++  G + T 
Sbjct: 3240 GAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTF 3299

Query: 242  GSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N  GQLG   T  + TP+ +  L  ++VG   ++A G  + +A+  +G VYSFG    
Sbjct: 3300 GMNDSGQLGLDHTQHQHTPQLVETLSSQKVG---RVACGLYHTVAIVDDGDVYSFGKNEY 3356

Query: 300  FCLGHGEQHDELQPRAIQ------TFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGY 352
              LG     +   P  ++      T     ++  V+V  G  H V +   G V TWG+  
Sbjct: 3357 GQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRND 3416

Query: 353  CGALGHGDEIDKTLPE--PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
             G LG G +  K++ +  PL  L S +    C       +LV+ G    FG    G LG 
Sbjct: 3417 YGQLGIGSKEHKSIAQFVPL-PLTSRVKRASCGCYHTLLLLVN-GRPMVFGRNNKGQLGV 3474

Query: 411  PDRGV-SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR---GRLFGFGDNERAQLGHD 466
              R + S  +  P  L  L +  V  IS G Y + ++T +    +L   G N       +
Sbjct: 3475 ASRSLPSADLPLPIPLHPLSSDEVVYISAGFYCSYILTGKEANDQLQAMGGNPTENPAEE 3534

Query: 467  -TLRGCLEPTEIFIQEMEE 484
             T R C    ++F   M++
Sbjct: 3535 MTSRTCRTSEKLFQDLMKQ 3553



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 18/216 (8%)

Query: 258  PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRA 315
            P   SI+ LE+ G   Q ++  S M        ++S G  +    CLGH    ++L+  +
Sbjct: 3106 PNNTSIS-LEQKGKDCQWSSTSSPMFE---ECEIFSCGQNNYGELCLGHCNPTNKLERAS 3161

Query: 316  IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLK 374
              +++     +  ++ G+E +V L   G V+T G    G  G G+  ++ + P P+ +L 
Sbjct: 3162 FFSYKS----IQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALS 3217

Query: 375  SHLAVQVCARK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS-DKVLRPRILDSLRAH 431
                  V A         +   G+VY +G+   G LG    G +  K   PR+++SLR  
Sbjct: 3218 GIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGL---GTTVSKSHTPRVIESLREK 3274

Query: 432  H-VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            + ++  +   +H+ VV++ G L  FG N+  QLG D
Sbjct: 3275 YFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLD 3310


>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
          Length = 531

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 126/250 (50%), Gaps = 9/250 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLAVTGN 288
           ++T    V+  GSN    LG GD      P+ +  L +   +V IA  +GP ++LAV+ N
Sbjct: 36  YITNDDEVYAIGSNCSSCLGLGDAHSSFEPRKVDVLCK-KKIVDIAFGSGP-HVLAVSKN 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G +YS+G      LG+G     L P  I T   +G  ++RV+ G  H +AL   G ++ W
Sbjct: 94  GEMYSWGHNGYCQLGNGGSGQGLTPTLINT-NLQGKKILRVACGSHHSMALSQEGEIFAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G+  CG +G G   ++  P  + + + + +A+ +   +  +  L++ G VYG+G+ G G 
Sbjct: 153 GQNNCGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALLENGEVYGWGYNGNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG    G +     P  +  L+   +SQ+  G  HT+ ++D G LF +G N   QLG   
Sbjct: 213 LGL---GNNVNQPNPCRVQQLQGVIISQLVCGYAHTLALSDEGSLFSWGANSYGQLGTGN 269

Query: 468 LRGCLEPTEI 477
               + P+++
Sbjct: 270 KANQVSPSKV 279



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 135/289 (46%), Gaps = 11/289 (3%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT--RINFPSAAHVVQVS-ASEN 174
           ++G     + ++  V++ GS+    LG G   +   SF   +++      +V ++  S  
Sbjct: 29  SSGNEAIYITNDDEVYAIGSNCSSCLGLGDAHS---SFEPRKVDVLCKKKIVDIAFGSGP 85

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   V ++G++++ G N     G+  + + +    +   L+G    +V  G + +  L+ 
Sbjct: 86  HVLAVSKNGEMYSWGHNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVACGSHHSMALSQ 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G +   G N  GQ+G G T ++PTP+ +  +      + IA G +  +A+  NG VY +
Sbjct: 146 EGEIFAWGQNNCGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALLENGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++  P  +Q  +  G+ + ++  G  H +AL   G +++WG    G
Sbjct: 206 GYNGNGQLGLGNNVNQPNPCRVQQLQ--GVIISQLVCGYAHTLALSDEGSLFSWGANSYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK--TFVLVDTGSVYGFG 401
            LG G++ ++  P  +  +     V++ A      +  + +TG V+ +G
Sbjct: 264 QLGTGNKANQVSPSKV-PMNGERMVEIAASHYAHISAAMSETGKVFMWG 311


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 141/301 (46%), Gaps = 17/301 (5%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I +G  HT+ L S   V+SCGS+  G LG   + +QC       F  A  +  V+A +
Sbjct: 34  ISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGF-GAEEIFHVAAGD 90

Query: 174 NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             +  + +SG +F  G   N    C        +  P+L++ +      QV  G      
Sbjct: 91  FFSIAIAESGLLFGWGRSLNGELMCKQDS----LHEPKLLDKIMHWSVVQVACGAQHCIA 146

Query: 232 LTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           LT  G + + GSNT GQLG G + ++   P  IA L     + QI AG  +   ++ +G 
Sbjct: 147 LTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF-PISQICAGAYHSGVLSPSGT 205

Query: 291 VYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           ++++G  +   LGHG   D  Q  PR ++T R +   VV V+ G+EH V    +G V++W
Sbjct: 206 LFTWGKNNWGQLGHGNS-DSFQSSPRLVKTLRHQ--EVVFVAMGEEHSVCRTRNGGVFSW 262

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G G  G LGH    + T P+ +  L      Q+C  +R T  L D   + GFG      L
Sbjct: 263 GHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQL 322

Query: 409 G 409
           G
Sbjct: 323 G 323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 23/265 (8%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           + +GL  T +LT    V++CGSN  GQLG   +  RP+  +    EE+     +AAG  +
Sbjct: 36  IASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKSQCRPSLVTGFGAEEI---FHVAAGDFF 92

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGE---QHDEL-QPRAIQTFRRKGIH--VVRVSAGDEH 335
            +A+  +G+++ +G   N     GE   + D L +P+ +     K +H  VV+V+ G +H
Sbjct: 93  SIAIAESGLLFGWGRSLN-----GELMCKQDSLHEPKLLD----KIMHWSVVQVACGAQH 143

Query: 336 VVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
            +AL   G + +WG    G LG G  EI+   P  ++SL +    Q+CA    + VL  +
Sbjct: 144 CIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPS 203

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           G+++ +G   +G LG    G SD     PR++ +LR   V  ++ G  H+V  T  G +F
Sbjct: 204 GTLFTWGKNNWGQLG---HGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVF 260

Query: 454 GFGDNERAQLGHDTLRGCLEPTEIF 478
            +G     QLGH+++    +P +I 
Sbjct: 261 SWGHGGNGQLGHNSMANVTQPKKIM 285



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 152/338 (44%), Gaps = 20/338 (5%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           ++  G +  G LG G E       + I+  +   V+ +++   H  ++  + +V++CG N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPID--ANQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 250
                G     +   RP LV          V AG  F+  +   G +   G + +G+L  
Sbjct: 59  E---FGQLGQQKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMC 115

Query: 251 HGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
             D+L  P       L+++   SVVQ+A G  + +A+T  G + S+GS +   LG G   
Sbjct: 116 KQDSLHEP-----KLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSE 170

Query: 309 DE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTL 366
            E L+P  I +       + ++ AG  H   L  SG ++TWGK   G LGHG+    ++ 
Sbjct: 171 IEFLEPTIIASL--NAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSS 228

Query: 367 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           P  + +L+    V V   +  +      G V+ +G  G G LG         V +P+ + 
Sbjct: 229 PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMA---NVTQPKKIM 285

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            L    V QI  G  HT+ +TD+ +L GFG N   QLG
Sbjct: 286 ELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 112/230 (48%), Gaps = 13/230 (5%)

Query: 238 VHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
           ++  G N +GQLG G + +    P   +P++   SV+ IA+G  + + +T    VYS GS
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCP---SPIDANQSVISIASGLRHTVYLTSTRKVYSCGS 57

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
                LG  +Q  + +P  +  F  +   +  V+AGD   +A+  SG ++ WG+   G L
Sbjct: 58  NEFGQLG--QQKSQCRPSLVTGFGAE--EIFHVAAGDFFSIAIAESGLLFGWGRSLNGEL 113

Query: 357 G-HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
               D + +  P+ L  +     VQV    +    L + G++  +G    G LG     +
Sbjct: 114 MCKQDSLHE--PKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEI 171

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             + L P I+ SL A  +SQI  G YH+ V++  G LF +G N   QLGH
Sbjct: 172 --EFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGH 219


>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 671

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 22/363 (6%)

Query: 102 HSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINF 160
           HS  +V  ++G  + ++ G   T+ + N  +V+S G +  G LG G   T   S + +  
Sbjct: 26  HSQKVVAGTSG-YIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDG---TTSNSNSPVQV 81

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                +  +SA   H   +   G V+T G   S   G   TN     P  +  L G+   
Sbjct: 82  KGLNGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDG-TNSLRTTPAPINGLTGITA- 139

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
            ++AG N T  L   G + + G N +GQLG G+T +   P  +    ++G +  I++G  
Sbjct: 140 -ISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVP--GQIG-ITSISSGGG 195

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + L +  +G V+S+G  +   LG+G   +   P  I         ++ VSAG  H  AL 
Sbjct: 196 HSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLN----GIINVSAGVIHSTALK 251

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           S G V+ WG  + G L +G++ID  +P   + L   +A  + A    +  +   G+ + +
Sbjct: 252 SDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNGIIA--ITAGWEFSSAIKSDGTFWVW 309

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   +G LG    G    V  P  + SL    ++ I TG  +TV +   G +F FG+N  
Sbjct: 310 GVNDYGQLG---NGSKSDVTSPMQVSSLSG--ITAIDTGATYTVALKTDGNIFAFGENTY 364

Query: 461 AQL 463
            QL
Sbjct: 365 GQL 367



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 15/207 (7%)

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSA 331
           + ++AG +  +A+  +G V+S+G   N  LG G   +   P      + KG++ +  +SA
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSP-----VQVKGLNGITAISA 92

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           G  H VAL S G V+TWG GY G LG G    +T P P++ L    A  + A    T  L
Sbjct: 93  GWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITA--ISAGWNHTLAL 150

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRG 450
              G+++ +G   +G LG  +   S+  L+ P  +       ++ IS+G  H++V+ + G
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQI------GITSISSGGGHSLVIKNDG 204

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            ++ +G N   QLG+ T      P +I
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQI 231



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 16/269 (5%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  HTL L ++ +++S G +  G LG G  T   +    +  P    +  +S+   H
Sbjct: 140 ISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNI---PLQVPGQIGITSISSGGGH 196

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           +  +   G V++ G N+    G+  ++N P   P  +  L G+    V+AG+  +  L  
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNP--TPHQISGLNGI--INVSAGVIHSTALKS 252

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  G+L +G+ +D   P     L     ++ I AG  +  A+  +G  + +
Sbjct: 253 DGTVWNWGCNFRGELANGNKIDSYIPVQANGLN---GIIAITAGWEFSSAIKSDGTFWVW 309

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      LG+G + D   P  + +       +  +  G  + VAL + G ++ +G+   G
Sbjct: 310 GVNDYGQLGNGSKSDVTSPMQVSSLS----GITAIDTGATYTVALKTDGNIFAFGENTYG 365

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
            LG+G     T PE +S   +++A    A
Sbjct: 366 QLGNGTTTGSTTPELVSIGDTYVATDKSA 394


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
           G    Q  +G   +  L     V +CG N+ GQLG         P+ I  LE +  V  +
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           + G  + LAV   G V+++G+GS   LG GE +     P+ I T     I +++VS G  
Sbjct: 81  SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL     V++WGK   G LG G E   +  P+ + SL+     QV A    +F L  
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            G+ +G+G    G L    R V  +  +P  + +L+   V  IS G  HT V+T  G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 454 GFGDNERAQLGH 465
            FGDN   QLG+
Sbjct: 259 TFGDNRSGQLGY 270



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A ++Q ++ E H+  +L + +V +CGDNS    G R   R    P  ++AL+ +    V+
Sbjct: 23  AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
            G   +  +  +G V   G+ + GQLG G+  +   TPK I  L ++  ++Q++ G  + 
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
           LA++ +  V+S+G  S+  LG G++   +  P+ +++   +GI + +V+AG  H  AL  
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198

Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
            G  + WG    G L   G    +    P  + +LK+   V +      T VL   G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258

Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
            FG    G LG+   P++     V R   +D L    VSQI  G YHT+  V   G++  
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311

Query: 455 FG 456
           FG
Sbjct: 312 FG 313



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
           +Q  +G  H+LL+ +N  V SCG +  G LG         PE  Q +    ++       
Sbjct: 26  LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             VS  + H+  V   G+VF  G  S    G  +     F P+ +  L  +   QV+ G 
Sbjct: 80  --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +  L+    V + G N+HGQLG G     + +P+ +  LE +  + Q+AAG ++  A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  G  + +GS S   L    ++  +Q  + +     K + VV +S GD H   L   G 
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           V+T+G    G LG+    +K  P+ +  +   ++   C        +  TG V  FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 29/367 (7%)

Query: 126 LISNSSVFSCGSSLCGVLGHGP-ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + + SSV + GS   G LG G  E  + V   +   P     V V+ S N  A +   G+
Sbjct: 1   MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSV-VAGSRNSLA-ICDDGK 58

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 245 THGQLGH----GDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVVYSFGSG 297
            +GQ G      D   RP  + I   +   S   V Q+AAG ++ + +T  G V+S+G  
Sbjct: 119 EYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWGQ- 177

Query: 298 SNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGY 352
                          P  I+      R +G+  VR ++ G  H +AL   G ++ WG   
Sbjct: 178 ------------PWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNE 225

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG GD   ++ P  +  L     V + A    +  L D G VYG+G    G LGF D
Sbjct: 226 YGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGD 285

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
              S K++ P+ ++ L    + Q+S G  H+V +T  GR++ FG  +  +LG+       
Sbjct: 286 NDKSSKMV-PQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHGRLGYGRKVTTG 344

Query: 473 EPTEIFI 479
           +P E+ I
Sbjct: 345 QPMEVPI 351



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 134/304 (44%), Gaps = 19/304 (6%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  ++L I  +  +F+ G +  G LGH PET      +++   +  ++VQ +    H
Sbjct: 43  VVAGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWH 102

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLV--EALKGVPCKQVTAGLNF 228
              V   G+ +  G N    CG       DT RP+ R  ++       +  +QV AG   
Sbjct: 103 CLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAGGTH 162

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  GHV + G         GD      P  +  LE    V  IA G  + LA+  +
Sbjct: 163 SVVLTREGHVWSWGQ----PWPPGDIKQISVPVRVQGLER---VRLIAVGAFHNLALQED 215

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G ++++G+     LG G+     QP  +Q     G+ +V ++AG  H  AL   G VY W
Sbjct: 216 GTLWAWGNNEYGQLGTGDTQPRSQPITVQGL--SGLTLVDIAAGGWHSTALTDDGEVYGW 273

Query: 349 GKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           G+G  G LG G  D+  K +P+ ++ L     VQV      +  L   G +Y FG    G
Sbjct: 274 GRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALTRDGRMYTFGRGDHG 333

Query: 407 SLGF 410
            LG+
Sbjct: 334 RLGY 337


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 156/355 (43%), Gaps = 29/355 (8%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT  ++ S  V+  G +  G LG G  T +         PS   V  ++A + H
Sbjct: 313 IAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSGLPSG--VETIAAGDYH 370

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNR-----PIFRPRLVEALKGVP--CKQVTAGLNF 228
              ++ SG V         C GH D  +        R   V A+ G+P     + AG   
Sbjct: 371 TCALMSSGGVR--------CWGHNDRGQLGDGTTTARSTPV-AVSGLPSGVTAIAAGRLH 421

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           T   T  G V   G N+ GQLG G   D  TP +++ L     V  IAAG  +  A+TG+
Sbjct: 422 TCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLAS--GVETIAAGGWHTCALTGS 479

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V+ +G  ++  LG G     + P A+         V  ++AG  H  AL  SG V+ W
Sbjct: 480 GGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSG---VTAIAAGGVHTCALTGSGGVWCW 536

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G  + G LG G   D++ P  +S L S +   + A    T  L  +G V+ +G   FG L
Sbjct: 537 GGNFAGQLGDGTTTDRSTPVAVSGLPSGV-TAIAAGDIHTCALTGSGGVWCWGGNDFGQL 595

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
           G    G +     P  +  L +  V+ I+ GL +T  +T  G ++ +G N   QL
Sbjct: 596 G---DGTTTNRSTPVAVSGLPS-GVTAIAAGLRYTCALTGSGGVWCWGYNLSGQL 646



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 156/367 (42%), Gaps = 25/367 (6%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  L S+  V+  GS+  G LG G  TT+         PS   V  ++A   H
Sbjct: 109 IAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSG--VTAIAAGGWH 166

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTG 230
                 SG V+  G N     G     D + P+       A+ G+P +   + AG   T 
Sbjct: 167 TCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPV-------AVSGLPSEVTAIAAGDAHTC 219

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
                G V   G N +GQLG G   D  TP +++ L     V  IAAG  +  A+TG+G 
Sbjct: 220 ARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPS--GVTAIAAGGVHTCALTGSGG 277

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V  +G+  +  LG+G       P A+         V  ++AGD H  AL  SG V+ WG 
Sbjct: 278 VRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG---VTAIAAGDYHTCALTGSGGVWCWGG 334

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
            Y G LG G    ++ P  +S L S +   + A    T  L+ +G V  +G    G LG 
Sbjct: 335 NYSGQLGDGTTTARSTPVAVSGLPSGVET-IAAGDYHTCALMSSGGVRCWGHNDRGQLG- 392

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
              G +     P  +  L +  V+ I+ G  HT   T  G ++ +GDN   QLG  +   
Sbjct: 393 --DGTTTARSTPVAVSGLPS-GVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTD 449

Query: 471 CLEPTEI 477
              P  +
Sbjct: 450 SSTPVAV 456



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 154/354 (43%), Gaps = 19/354 (5%)

Query: 117 ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ S    C G++  G LG+G    +         PS   V  ++A + H
Sbjct: 262 IAAGGVHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG--VTAIAAGDYH 319

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP--CKQVTAGLNFTGFLT 233
              +  SG V+  G N S   G         R   V A+ G+P   + + AG   T  L 
Sbjct: 320 TCALTGSGGVWCWGGNYS---GQLGDGTTTARSTPV-AVSGLPSGVETIAAGDYHTCALM 375

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N  GQLG G T  R TP +++ L     V  IAAG  +  A T +G V+ 
Sbjct: 376 SSGGVRCWGHNDRGQLGDGTTTARSTPVAVSGLPS--GVTAIAAGRLHTCARTSSGGVWC 433

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G  S+  LG G   D   P A+         V  ++AG  H  AL  SG V+ WG+   
Sbjct: 434 WGDNSDGQLGDGSFTDSSTPVAVSGLASG---VETIAAGGWHTCALTGSGGVWCWGRNNS 490

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G  I    P  +S L S +   + A    T  L  +G V+ +G    G LG  D 
Sbjct: 491 GQLGDGSTIYHITPVAVSGLPSGV-TAIAAGGVHTCALTGSGGVWCWGGNFAGQLG--DG 547

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
             +D+   P  +  L +  V+ I+ G  HT  +T  G ++ +G N+  QLG  T
Sbjct: 548 TTTDRS-TPVAVSGLPSG-VTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGT 599



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 159/401 (39%), Gaps = 69/401 (17%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT  L+S+  V   G +  G LG G  T +         PS   V  ++A   H
Sbjct: 364 IAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTARSTPVAVSGLPSG--VTAIAAGRLH 421

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
                 SG V+  GDNS    G     D++ P+    L   ++      + AG   T  L
Sbjct: 422 TCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVE-----TIAAGGWHTCAL 476

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V   G N  GQLG G T+   TP +++ L     V  IAAG  +  A+TG+G V+
Sbjct: 477 TGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPS--GVTAIAAGGVHTCALTGSGGVW 534

Query: 293 SFGSGSNFC--LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
            +G   NF   LG G   D   P A+         V  ++AGD H  AL  SG V+ WG 
Sbjct: 535 CWGG--NFAGQLGDGTTTDRSTPVAVSGLPSG---VTAIAAGDIHTCALTGSGGVWCWGG 589

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL-- 408
              G LG G   +++ P  +S L S +   + A  R T  L  +G V+ +G+   G L  
Sbjct: 590 NDFGQLGDGTTTNRSTPVAVSGLPSGV-TAIAAGLRYTCALTGSGGVWCWGYNLSGQLDD 648

Query: 409 ------------GFPD---------------------------------RGVSDKVLRPR 423
                       G P                                   G + K   P 
Sbjct: 649 GTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPV 708

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            +  L +  V+ I+ G  HT  +   G ++ +G N+  QLG
Sbjct: 709 AVSGLPSG-VTAIAAGGEHTCALMSSGGVWCWGRNDSGQLG 748



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 118/264 (44%), Gaps = 12/264 (4%)

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           L+GV    + AG   T   T  G V   G N  G+LG G   D  TP +++ L     V 
Sbjct: 52  LQGV--TAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPS--GVT 107

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            IAAG ++  A+T +G V+ +GS     LG G       P A+         V  ++AG 
Sbjct: 108 AIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSG---VTAIAAGG 164

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
            H  A  SSG V+ WG  Y G LG G   D++ P  +S L S +   + A    T   + 
Sbjct: 165 WHTCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSEV-TAIAAGDAHTCARMS 223

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           +G V+ +G   +G LG  D   +D    P  +  L +  V+ I+ G  HT  +T  G + 
Sbjct: 224 SGEVWCWGGNNYGQLG--DGSYTDSS-TPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVR 279

Query: 454 GFGDNERAQLGHDTLRGCLEPTEI 477
            +G N   QLG+    G   P  +
Sbjct: 280 CWGANYSGQLGNGLTFGRSTPGAV 303



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 111/254 (43%), Gaps = 15/254 (5%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ S  V+  G +  G LG G  T +         PS   V  ++A + H
Sbjct: 517 IAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSG--VTAIAAGDIH 574

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLT 233
              +  SG V+  G N     G    TNR    P  V  L  GV    + AGL +T  LT
Sbjct: 575 TCALTGSGGVWCWGGNDFGQLGDGTTTNRST--PVAVSGLPSGV--TAIAAGLRYTCALT 630

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N  GQL  G T  R TP +++ L     V  IAAG  Y  A T +G V  
Sbjct: 631 GSGGVWCWGYNLSGQLDDG-TTSRSTPVAVSGLPS--GVTAIAAGGWYTCARTSSGGVRC 687

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+  +  LG G       P A+         V  ++AG EH  AL SSG V+ WG+   
Sbjct: 688 WGANGSGQLGDGTTTKRSTPVAVSGLPSG---VTAIAAGGEHTCALMSSGGVWCWGRNDS 744

Query: 354 GALGHGDEIDKTLP 367
           G LG G  + +T P
Sbjct: 745 GQLGDGRPLYRTTP 758



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 97/218 (44%), Gaps = 13/218 (5%)

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC-LGHGEQHDELQPRAIQTF 319
            S +PL+    V  IAAG  +  A T +G V+ +G G++F  LG G   D   P A+   
Sbjct: 47  SSFSPLQ---GVTAIAAGGGHTCARTSSGGVWCWG-GNDFGRLGDGSYTDSSTPVAVSGL 102

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
                 V  ++AG  H  AL SSG V+ WG  + G LG G    ++ P  +S L S +  
Sbjct: 103 PSG---VTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSGV-T 158

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            + A    T     +G V+ +G    G LG  D   +D+   P  +  L +  V+ I+ G
Sbjct: 159 AIAAGGWHTCARTSSGGVWCWGGNYRGQLG--DGTTTDRS-TPVAVSGLPS-EVTAIAAG 214

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             HT      G ++ +G N   QLG  +      P  +
Sbjct: 215 DAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAV 252



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 89/212 (41%), Gaps = 10/212 (4%)

Query: 117 ITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G  HT  ++ S  V+  G +  G LG G  T +         PS   V  ++A   +
Sbjct: 568 IAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPSG--VTAIAAGLRY 625

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-KGVPCKQVTAGLNFTGFLTI 234
              +  SG V+  G N S       T+R    P  V  L  GV    + AG  +T   T 
Sbjct: 626 TCALTGSGGVWCWGYNLSGQLDDGTTSRST--PVAVSGLPSGV--TAIAAGGWYTCARTS 681

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G+N  GQLG G T  R TP +++ L     V  IAAG  +  A+  +G V+ +
Sbjct: 682 SGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLPS--GVTAIAAGGEHTCALMSSGGVWCW 739

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
           G   +  LG G       P  + T    G+++
Sbjct: 740 GRNDSGQLGDGRPLYRTTPVDVVTSASWGVYL 771


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 166/375 (44%), Gaps = 48/375 (12%)

Query: 116  QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
            Q+  G+  T +I  N +V +CG    G LG G  +      T I+      V Q+     
Sbjct: 1156 QVVCGQNCTFVIQPNGTVLACGEGSYGRLGQG-NSDDLHVLTVISALQGFVVTQLVTSCG 1214

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--------------- 216
            S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G               
Sbjct: 1215 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQVGRGRAAGAG 1273

Query: 217  -VPCK-------QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE- 267
               C+       Q++ G   +  +T  G + T G+  +G+LG G+T ++  P+ +A LE 
Sbjct: 1274 LCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEG 1333

Query: 268  -EVGSVVQIAAGPSYMLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK--- 322
             ++G V  +A G ++ L V+ +G+ V++FG G    LG G    +  P+      +    
Sbjct: 1334 YQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTL 1393

Query: 323  ----------GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
                      GI + +V+ G +  VAL   G V+T+G+     L      +   P+ L +
Sbjct: 1394 CQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPA 1453

Query: 373  LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
            L       V      T  L  TG VY +G    G LG    G ++ V  P ++  L+  H
Sbjct: 1454 LSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGL---GHTNHVREPTVVTMLQGKH 1510

Query: 433  VSQISTGLYHTVVVT 447
            + Q+S G  H+   T
Sbjct: 1511 IHQVSAGRCHSAAWT 1525



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 151/361 (41%), Gaps = 46/361 (12%)

Query: 161  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
            PS +   QV   +N    +  +G V  CG+ S    G  +++  +    ++ AL+G    
Sbjct: 1149 PSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVVT 1207

Query: 221  QVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSV--- 272
            Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L  EEV  V   
Sbjct: 1208 QLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRG 1267

Query: 273  -----------------VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 315
                             +Q++ G  +   VT +G +++FG+G    LG G   ++  P  
Sbjct: 1268 RAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPER 1327

Query: 316  IQTFRRKGI-HVVRVSAGDEHVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLS-- 371
            +       I  V  V+ G  H + + + G  V+ +G G  G LG G+   K+ P+  +  
Sbjct: 1328 VAALEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVI 1387

Query: 372  ----SLKSHLAVQV-CARKRK--------TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
                +L   L V V C    K        +  L   G V+ FG      +G P+    + 
Sbjct: 1388 LQSPTLCQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRL--IGLPESRARNH 1445

Query: 419  VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
              RP+ L +L   HV  ++ G  HT+ ++  G ++ +G N   QLG        EPT + 
Sbjct: 1446 N-RPQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVT 1504

Query: 479  I 479
            +
Sbjct: 1505 M 1505



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 114/274 (41%), Gaps = 39/274 (14%)

Query: 238  VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V   G+  HGQL   G  +  PT    AP        Q+  G +    +  NG V + G 
Sbjct: 1124 VFLWGAGRHGQLAEAGRNILVPT---TAP--SFSQAQQVVCGQNCTFVIQPNGTVLACGE 1178

Query: 297  GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
            GS   LG G   D      I   +   +  +  S G D H +AL  SG V++WG G  G 
Sbjct: 1179 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 1238

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQV------------------------CARKRKTFVL 391
            LGHG+   +  P  + +L+    VQV                        C  K    V 
Sbjct: 1239 LGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVT 1298

Query: 392  VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQISTGLYHTVVVTDR 449
             D G ++ FG   +G LG  +   S+K L  R+  L+  +   V+ ++ GL HT+VV+  
Sbjct: 1299 AD-GKLFTFGNGDYGRLGLGN--TSNKKLPERVAALEGYQIGQVANVACGLNHTLVVSAD 1355

Query: 450  GRL---FGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
            G +   FG GD  +  LG+ T +   +   + +Q
Sbjct: 1356 GMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQ 1389



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
            V+ WG G  G L    E  + +  P ++     A QV   +  TFV+   G+V   G   
Sbjct: 1124 VFLWGAGRHGQLA---EAGRNILVPTTAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGS 1180

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD +    ++ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 1181 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1237

Query: 462  QLGHDTLRGCLEPTEIFIQEMEE 484
            +LGH        P +I   + EE
Sbjct: 1238 KLGHGNSDRQRRPRQIEALQGEE 1260


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 159/335 (47%), Gaps = 13/335 (3%)

Query: 107  VETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSA 163
            V  S     QI  G+  T +I +N +V +CG    G LG G   +  Q    + +     
Sbjct: 3208 VTPSFSQAQQIICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVV 3267

Query: 164  AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
              +V    S+ H+  + +SG+VF+ GD      GH +++R   RPR +EAL+G    Q+ 
Sbjct: 3268 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEIIQMA 3326

Query: 224  AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYM 282
             G   +  ++  G + T G+  +G+LG G+T ++  P+ +  LE  G +V Q+  G ++ 
Sbjct: 3327 CGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALE--GQMVGQVGCGLNHT 3384

Query: 283  LAVTGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            LAV+ +G  V+SFG G    LG G    +  P+ +      GI V +V  G +  VAL  
Sbjct: 3385 LAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPL--CGIGVKKVCCGTQFSVALTK 3442

Query: 342  SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
             G V+T+G+            +   P+ + +L++     V      +  L  TG V+ +G
Sbjct: 3443 DGRVFTFGQERLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWG 3502

Query: 402  WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
              G G LG    G ++    P ++ +L+  +V Q+
Sbjct: 3503 SNGDGQLGI---GDTNARREPCLVTALQGKNVRQV 3534



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 13/309 (4%)

Query: 161  PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
            PS +   Q+   +N   FV+Q+ G V  CG+ S    G  +++  + +  ++ AL+G   
Sbjct: 3210 PSFSQAQQIICGQN-CTFVIQANGTVQACGEGSYGRLGQGNSDD-LHQLTIISALQGFVV 3267

Query: 220  KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
             Q+       G    LT  G V + G   +G+LGHG++  +  P+ I  L+    ++Q+A
Sbjct: 3268 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEIIQMA 3326

Query: 277  AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
             G  +   V+ +G +++FG+G    LG G   ++  P  +     +G  V +V  G  H 
Sbjct: 3327 CGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTAL--EGQMVGQVGCGLNHT 3384

Query: 337  VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
            +A+ + G  V+++G G  G LG G+   K+ P+ +  L      +VC   + +  L   G
Sbjct: 3385 LAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDG 3444

Query: 396  SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             V+ FG      +G P+   S    RP+ + +L A  V  +  G  H++ +T  G ++ +
Sbjct: 3445 RVFTFGQERL--IGQPE-SRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAW 3501

Query: 456  GDNERAQLG 464
            G N   QLG
Sbjct: 3502 GSNGDGQLG 3510



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 11/233 (4%)

Query: 235  RGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            R   +  G   HGQL   G +L  PT   + P        QI  G +    +  NG V +
Sbjct: 3182 RCEAYMWGGGRHGQLAETGRSLLTPT---VTP--SFSQAQQIICGQNCTFVIQANGTVQA 3236

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGY 352
             G GS   LG G   D  Q   I   +   +  +  S G D H +AL  SG V++WG G 
Sbjct: 3237 CGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 3296

Query: 353  CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
             G LGHG+   +  P  + +L+    +Q+    + + V+   G ++ FG   +G LG  +
Sbjct: 3297 YGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGN 3356

Query: 413  RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLG 464
               S+K + P  + +L    V Q+  GL HT+ V+ D   ++ FGD +  +LG
Sbjct: 3357 --TSNKKI-PERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLG 3406



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 127/298 (42%), Gaps = 43/298 (14%)

Query: 123  HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
            H++ ++ S  VFS G    G LGHG    Q     +I       ++Q++    H+A V  
Sbjct: 3279 HSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEIIQMACGFKHSAVVSA 3337

Query: 182  SGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
             G++FT G+      G  +T N+ I  P  V AL+G    QV  GLN T  ++  G+ V 
Sbjct: 3338 DGKLFTFGNGDYGRLGLGNTSNKKI--PERVTALEGQMVGQVGCGLNHTLAVSADGNTVW 3395

Query: 240  TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            + G   +G+LG G++  + TP+ + PL  +G V ++  G  + +A+T +G V++FG    
Sbjct: 3396 SFGDGDYGKLGLGNSTAKSTPQRVDPLCGIG-VKKVCCGTQFSVALTKDGRVFTFGQ--E 3452

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY------- 352
              +G  E       R  Q    +   V  V  G EH +AL S+G V+ WG          
Sbjct: 3453 RLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIG 3512

Query: 353  ---------------------------CGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
                                        G LG GD   +  P  ++ L+     Q+ A
Sbjct: 3513 DTNARREPCLVTALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVTDLQGKNVRQISA 3570



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 9/148 (6%)

Query: 345  VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
             Y WG G  G L    E  ++L  P  +     A Q+   +  TFV+   G+V   G   
Sbjct: 3185 AYMWGGGRHGQLA---ETGRSLLTPTVTPSFSQAQQIICGQNCTFVIQANGTVQACGEGS 3241

Query: 405  FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
            +G LG   +G SD + +  I+ +L+   V+Q+ T      H++ +T+ G +F +GD +  
Sbjct: 3242 YGRLG---QGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3298

Query: 462  QLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
            +LGH        P +I   + EE   +A
Sbjct: 3299 KLGHGNSDRQRRPRQIEALQGEEIIQMA 3326


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 145/304 (47%), Gaps = 23/304 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q++ +E     + +SG+V+T   +S               P+LV+ L      ++ A 
Sbjct: 454 VSQIACAEKRFLILSRSGRVYTQAYSSD-----------ALAPQLVQGLVSRNIVKIAAH 502

Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
            +   +L +   G V++ G    G+LGHGDT+    PK I+    ++ G  VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGST 562

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
           Y  A+T  G +Y++G G+   LGHG   DE  P  +     KG+ V+ V+  +GD   +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           +  +G V++WG G  G LG G       P+ +  L+    V+V    + +  L   G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
            +G      LG    G  + V  P++L+ L+   V  ++ G  H + +T+   +  +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737

Query: 459 ERAQ 462
           ++ Q
Sbjct: 738 DQCQ 741



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 9/203 (4%)

Query: 271 SVVQIAAGPS--YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHV 326
           ++V+IAA     + LA+   G VYS+G G    LGHG+     +P+ I  F  ++ G  V
Sbjct: 495 NIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRV 554

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC--AR 384
           V ++ G  +  A+ + G +YTWG+G  G LGHG   D+ +P  ++ LK    + V   + 
Sbjct: 555 VHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSG 614

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
             +T  + + G V+ +G   +G LG   RG SD    P++++ L+   V ++  G   +V
Sbjct: 615 DAQTLAVTENGQVWSWGDGDYGKLG---RGGSDGCKTPKLVEKLQDLDVVKVRCGSQFSV 671

Query: 445 VVTDRGRLFGFGDNERAQLGHDT 467
            +T  G+++ +G  +  +LGH T
Sbjct: 672 ALTKDGQVYSWGKGDNQRLGHGT 694



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 19/261 (7%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-------AHVVQVS 170
           + G ++  L +   V+S G    G LGHG      V        SA         VV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKLISAFCGKQAGQRVVHIA 558

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               ++A +   G+++T G  +    GH  +      P LV  LKG+    V  G     
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617

Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            L +   G V + G   +G+LG G +    TPK +  L+++  VV++  G  + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL-DVVKVRCGSQFSVALTKD 676

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VYS+G G N  LGHG +     P+ ++    +G  V+ V+AG  H +AL     V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 349 GKGYCGALGHGDEIDKTLPEP 369
           G        H D +  T PEP
Sbjct: 735 GSN--DQCQHFDTLHATKPEP 753



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 20/221 (9%)

Query: 260 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           P   A L  +G V QIA      L ++ +G VY+    S          D L P+ +Q  
Sbjct: 443 PIQCAGLASLG-VSQIACAEKRFLILSRSGRVYTQAYSS----------DALAPQLVQGL 491

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA- 378
             + I  +   +   H +AL ++G VY+WG G  G LGHGD +    P+ +S+     A 
Sbjct: 492 VSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAG 551

Query: 379 ---VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
              V +      +  +   G +Y +G   +G LG    G S+    P ++  L+   V  
Sbjct: 552 QRVVHIACGSTYSAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVID 608

Query: 436 IS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           ++  +G   T+ VT+ G+++ +GD +  +LG     GC  P
Sbjct: 609 VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 649


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 134/295 (45%), Gaps = 10/295 (3%)

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
           S  ++T G   ++  G R T     +P L++  +    +QV  G   T  L   G +H+ 
Sbjct: 9   SSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSF 68

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
           G N +GQLG+G  +D P   S         ++ +A G  +  A+  NG V+++G G N  
Sbjct: 69  GYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGR 128

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGH ++     P  I    R      ++  G  H+ A  +   +YTWG G  G LG G  
Sbjct: 129 LGHNDEQTRTIPCRITHLPR----AHKIFCG-YHITAAITDDGLYTWGWGEHGQLGQGSL 183

Query: 362 IDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
            D   P+ +    ++LA+ Q+    R   V  ++G VY +G   FG LG    G  +++ 
Sbjct: 184 EDSYGPKKVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGI---GRYNEIY 240

Query: 421 -RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
             P +L SL    V+ ++ G  H+  VT+ G LF +G     Q GH     C  P
Sbjct: 241 SSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMP 295



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 144/319 (45%), Gaps = 25/319 (7%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  HTL L+ +  + S G +  G LG+G +    +  +R     +  ++ V+    
Sbjct: 48  QVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRY 107

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGL 226
           H+A +  +G VFT G   +   GH D           E  + +PC+        ++  G 
Sbjct: 108 HSAALDVNGTVFTWGGGKNGRLGHND-----------EQTRTIPCRITHLPRAHKIFCGY 156

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           + T  +T  G ++T G   HGQLG G   D   PK +   +   ++ Q+A G  + L  T
Sbjct: 157 HITAAITDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRT 215

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G VY++GS     LG G +++E+    +      G+ V  V+AGD H  A+ ++G ++
Sbjct: 216 ESGDVYTWGSNEFGQLGIG-RYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLF 274

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           TWG G  G  GHGD  D  +P  + SL     ++V      T  L     +Y FG   +G
Sbjct: 275 TWGCGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYG 334

Query: 407 SLGFPDRGVSDKVLRPRIL 425
            LG    G       PR L
Sbjct: 335 QLG---DGSKSSCCTPRKL 350



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 12/195 (6%)

Query: 290 VVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
            +Y++G   N+ LG  G + D  QP  I+ F    I   +V+ G  H + L   G ++++
Sbjct: 11  ALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQ--QVACGGGHTLVLLEDGCLHSF 68

Query: 349 GKGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           G    G LG+G ++D  L     +SSL + L    C R     + V+ G+V+ +G    G
Sbjct: 69  GYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVN-GTVFTWGGGKNG 127

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  D     + +  RI    RAH   +I  G + T  +TD G L+ +G  E  QLG  
Sbjct: 128 RLGHNDE--QTRTIPCRITHLPRAH---KIFCGYHITAAITDDG-LYTWGWGEHGQLGQG 181

Query: 467 TLRGCLEPTEIFIQE 481
           +L     P ++   +
Sbjct: 182 SLEDSYGPKKVIFDD 196



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 3/127 (2%)

Query: 341 SSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
           +S  +YTWG+     LG  G   D   PE +   ++    QV      T VL++ G ++ 
Sbjct: 8   ASSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHS 67

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           FG+  +G LG   + V   +   R + SL ++ +  ++ G YH+  +   G +F +G  +
Sbjct: 68  FGYNQYGQLGNGTK-VDSPLDASRDISSL-SNKLIAVACGRYHSAALDVNGTVFTWGGGK 125

Query: 460 RAQLGHD 466
             +LGH+
Sbjct: 126 NGRLGHN 132


>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 734

 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 171/373 (45%), Gaps = 22/373 (5%)

Query: 107 VETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH 165
           V++     + +  G  H+L++ S+ +V+S G ++ G LG G    +  S  ++++ S   
Sbjct: 329 VQSGLSGGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRS-SAVKVSWLSLGR 387

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK-QVTA 224
              VS+ + H+  +  +G V+  GDN S   G+           LV A  G+     V+A
Sbjct: 388 A-DVSSGQLHSVVLDSNGAVWAWGDNYSGQLGN-----GTGLDSLVAAPVGLGGSVAVSA 441

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   T  L     V   G N HGQLG G   DR  P  +A L  V +V   +AG  + LA
Sbjct: 442 GFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRTRPVQVAGLSGVSAV---SAGSYHSLA 498

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  NG V+++G      LG G   D LQP  +Q     G  VV V+AGD H +AL S G 
Sbjct: 499 LRSNGTVWAWGFNRYGQLGDGTNTDRLQP--VQVAGLSG--VVAVAAGDSHSLALRSDGT 554

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           V+ WG  + G +G G    + LP  +  +     V V A    +  L   G+V+ +G+ G
Sbjct: 555 VWAWGYNFDGQIGDGSYSWRFLP--VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNG 612

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG      S  + +P  +       V  + +G YH++ +   G ++ +G N   QLG
Sbjct: 613 SGQLGDG----STAINKPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLG 668

Query: 465 HDTLRGCLEPTEI 477
             +L     P  +
Sbjct: 669 DGSLLNRSTPVRV 681



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 164/368 (44%), Gaps = 31/368 (8%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G Y++L L S+ +V++ G +  G LG G  T + V    +N    + V+ +SA  
Sbjct: 189 IAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNL---SGVMNLSAGS 245

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H   +   G V+  G N+    G   T    F+P  V    G+         N+   L 
Sbjct: 246 FHTVALRSDGSVWAWGFNAYGQLGD-GTTTSRFQPVQV----GLSDVLTLVAGNYH-SLA 299

Query: 234 IR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +R  G V   G N + QLG G T     P        +   V + AG  + L +  +G V
Sbjct: 300 VRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQ----SGLSGGVTLVAGYKHSLVLRSDGTV 355

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEHVVALDSSGYVYTWG 349
           +S+G      LG G       PR+    +   + + R  VS+G  H V LDS+G V+ WG
Sbjct: 356 WSWGDNVFGQLGDGT----FNPRS-SAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWG 410

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             Y G LG+G  +D  +  P+    S   V V A  + T VL    +V+ +G    G LG
Sbjct: 411 DNYSGQLGNGTGLDSLVAAPVGLGGS---VAVSAGFKHTLVLKADTTVWAWGVNEHGQLG 467

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
             D  ++D+  RP  +  L    VS +S G YH++ +   G ++ +G N   QLG  T  
Sbjct: 468 --DGTLTDRT-RPVQVAGLSG--VSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNT 522

Query: 470 GCLEPTEI 477
             L+P ++
Sbjct: 523 DRLQPVQV 530



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 14/247 (5%)

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   G N  GQLG G  +D PTP  +  L     VV +A+G  + L ++ +G V+++G
Sbjct: 55  GTVWAWGFNRQGQLGDGTLVDSPTPVRVTNLS---GVVSVASGDYHSLGLSSDGTVWAWG 111

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
             +   LG+G       P  +Q        VV + +G  H +AL S G V+ WG      
Sbjct: 112 DNTAGQLGNGTASASPVPVRVQNLS----GVVSLGSGFSHGLALRSDGTVWAWGDNRYNQ 167

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG+       LP  +  L   +AV   A    +  L   G+V+ +G   +G LG  D   
Sbjct: 168 LGNVGATRSNLPVQVPGLSGVIAV--VAGGYYSLALRSDGTVWAWGDNRYGQLG--DGTT 223

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
           + + +  ++L+      V  +S G +HTV +   G ++ +G N   QLG  T     +P 
Sbjct: 224 TQRAVPVQVLN---LSGVMNLSAGSFHTVALRSDGSVWAWGFNAYGQLGDGTTTSRFQPV 280

Query: 476 EIFIQEM 482
           ++ + ++
Sbjct: 281 QVGLSDV 287



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 159/366 (43%), Gaps = 36/366 (9%)

Query: 107 VETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-A 164
           V+    + + +  G YH+L + S+ +V++ G +    LG G  T+     +R+   S  +
Sbjct: 280 VQVGLSDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTS-----SRVPVQSGLS 334

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK----GVPCK 220
             V + A   H+  +   G V++ GDN     G        F PR   A+K     +   
Sbjct: 335 GGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGD-----GTFNPR-SSAVKVSWLSLGRA 388

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
            V++G   +  L   G V   G N  GQLG+G  LD      +A    +G  V ++AG  
Sbjct: 389 DVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLD----SLVAAPVGLGGSVAVSAGFK 444

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + L +  +  V+++G   +  LG G   D  +P  +Q     G+  V  SAG  H +AL 
Sbjct: 445 HTLVLKADTTVWAWGVNEHGQLGDGTLTDRTRP--VQVAGLSGVSAV--SAGSYHSLALR 500

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           S+G V+ WG    G LG G   D+  P  ++ L     V V A    +  L   G+V+ +
Sbjct: 501 SNGTVWAWGFNRYGQLGDGTNTDRLQPVQVAGLSG--VVAVAAGDSHSLALRSDGTVWAW 558

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           G+   G +G       D     R L    +    V  +S G YH++ +   G ++ +G N
Sbjct: 559 GYNFDGQIG-------DGSYSWRFLPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYN 611

Query: 459 ERAQLG 464
              QLG
Sbjct: 612 GSGQLG 617



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 146/346 (42%), Gaps = 25/346 (7%)

Query: 135 CGSSLCGVLGHGPETTQCVSFTRINFP--SAAHVVQVSASENHAAFVLQSGQVFTCGDNS 192
            G+ L    G GP   +  +  R+  P    +   +++  + H+  V   G V+  G N 
Sbjct: 6   LGAWLVAGCGPGPGVEEP-ALGRVRSPLGGRSSAARLALGQYHSVGVHSDGTVWAWGFNR 64

Query: 193 SFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
               G     + P   P  V  L GV    V +G   +  L+  G V   G NT GQLG+
Sbjct: 65  QGQLGDGTLVDSPT--PVRVTNLSGVVS--VASGDYHSLGLSSDGTVWAWGDNTAGQLGN 120

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDE 310
           G     P P  +   + +  VV + +G S+ LA+  +G V+++G      LG+ G     
Sbjct: 121 GTASASPVPVRV---QNLSGVVSLGSGFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSN 177

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
           L    +Q     G  V+ V AG  + +AL S G V+ WG    G LG G    + +P  +
Sbjct: 178 LP---VQVPGLSG--VIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQV 232

Query: 371 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
            +L     + + A    T  L   GSV+ +G+  +G LG    G +    +P     +  
Sbjct: 233 LNLSG--VMNLSAGSFHTVALRSDGSVWAWGFNAYGQLG---DGTTTSRFQPV---QVGL 284

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
             V  +  G YH++ V   G ++ +GDN   QLG  T      P +
Sbjct: 285 SDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQ 330



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 117/254 (46%), Gaps = 17/254 (6%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G YH+L L SN +V++ G +  G LG G  T +      +     + VV V+A ++H
Sbjct: 489 VSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDR---LQPVQVAGLSGVVAVAAGDSH 545

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  +   G V+  G N     G    +   +R   V+ +       V+AG   +  L   
Sbjct: 546 SLALRSDGTVWAWGYNFDGQIGDGSYS---WRFLPVQVVGLSGVVSVSAGGYHSLALRSD 602

Query: 236 GHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
           G V T G N  GQLG G T +++P P  +A L     VV + +G  + L +  +G V+++
Sbjct: 603 GTVWTWGYNGSGQLGDGSTAINKPAPVQVAGLS---GVVSLGSGNYHSLGLRSDGTVWAW 659

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           G   +  LG G   +   P      R  G+  VV V AGD H +A  S G V+ WG    
Sbjct: 660 GFNFDGQLGDGSLLNRSTP-----VRVSGLSGVVSVVAGDYHSLARRSDGTVWAWGYNGE 714

Query: 354 GALGHGDEIDKTLP 367
           G LG G   D  +P
Sbjct: 715 GQLGDGTRNDTLVP 728



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 141/345 (40%), Gaps = 62/345 (17%)

Query: 114 QMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS 172
           +  +++G+ H++++ SN +V++ G +  G LG+G      V+   +    +   V VSA 
Sbjct: 387 RADVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVA-APVGLGGS---VAVSAG 442

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             H   +     V+  G N     G    T+R   RP  V  L GV    V+AG   +  
Sbjct: 443 FKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRT--RPVQVAGLSGVSA--VSAGSYHSLA 498

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           L   G V   G N +GQLG G   DR  P  +A L     VV +AAG S+ LA+  +G V
Sbjct: 499 LRSNGTVWAWGFNRYGQLGDGTNTDRLQPVQVAGLS---GVVAVAAGDSHSLALRSDGTV 555

Query: 292 YSFGSGSNFCLGHGEQHDELQP----------------------RAIQTFRRKGIH---- 325
           +++G   +  +G G       P                      R+  T    G +    
Sbjct: 556 WAWGYNFDGQIGDGSYSWRFLPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQ 615

Query: 326 ---------------------VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
                                VV + +G+ H + L S G V+ WG  + G LG G  +++
Sbjct: 616 LGDGSTAINKPAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNR 675

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           + P  +S L     V V A    +      G+V+ +G+ G G LG
Sbjct: 676 STPVRVSGLSG--VVSVVAGDYHSLARRSDGTVWAWGYNGEGQLG 718


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 134/304 (44%), Gaps = 13/304 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SA N++  TT         N+ +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 53  SASNEVLYTT--------VNNEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T ++P P+ +    +  +VV IA G    +AV   
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDA 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GIHV RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G LG G++ +++ P P+S  K   + +  C     +      G+VY +G     S
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPISVEKDRIIEIAACHSTHTSAAKTQGGNVYMWGQCRGQS 341

Query: 408 LGFP 411
           +  P
Sbjct: 342 VTLP 345



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 122/253 (48%), Gaps = 7/253 (2%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 289
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATT-EG 118

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCYIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 177

Query: 350 KGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
               G +G G   ++ +P  ++  L++   V +   +  +  +VD G VY +G+ G G L
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQL 237

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
           G    G S     P  + +L+  HV +++ G  HT+V+TD G+++ +G N   QLG    
Sbjct: 238 GL---GSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 469 RGCLEPTEIFIQE 481
                PT I +++
Sbjct: 295 SNQSYPTPISVEK 307



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 12/277 (4%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNF 228
           ++ N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G + 
Sbjct: 53  SASNEVLYTTVNNEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHI 111

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
               T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +
Sbjct: 112 V-LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSD 170

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V+++G  ++  +G G   ++  PR + T   +   VV ++ G    +A+  +G VY W
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRV-TGCLQNKAVVNIACGQMCSMAVVDAGEVYVW 229

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G    G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G L
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQL 289

Query: 409 GFPDRGVSD-----KVLRPRILDSLRAH--HVSQIST 438
           G  ++          V + RI++    H  H S   T
Sbjct: 290 GTGNKSNQSYPTPISVEKDRIIEIAACHSTHTSAAKT 326


>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
           743B]
 gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 852

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 22/363 (6%)

Query: 102 HSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINF 160
           HS  +V  ++G  + ++ G   T+ + N  +V+S G +  G LG G   T   S + +  
Sbjct: 26  HSQKVVAGTSG-YIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDG---TTSNSNSPVQV 81

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
                +  +SA   H   +   G V+T G   S   G   TN     P  +  L G+   
Sbjct: 82  KGLNGITAISAGWAHFVALKSDGTVWTWGVGYSGELGDG-TNSLRTTPAPINGLTGITA- 139

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
            ++AG N T  L   G + + G N +GQLG G+T +   P  +    ++G +  I++G  
Sbjct: 140 -ISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVP--GQIG-ITSISSGGG 195

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + L +  +G V+S+G  +   LG+G   +   P  I         ++ VSAG  H  AL 
Sbjct: 196 HSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLN----GIINVSAGVIHSTALK 251

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           S G V+ WG  + G L +G++ID  +P   + L   +A  + A    +  +   G+ + +
Sbjct: 252 SDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNGIIA--ITAGWEFSSAIKSDGTFWVW 309

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   +G LG    G    V  P  + SL    ++ I TG  +TV +   G +F FG+N  
Sbjct: 310 GVNDYGQLG---NGSKSDVTSPMQVSSLSG--ITAIDTGATYTVALKTDGNIFAFGENTY 364

Query: 461 AQL 463
            QL
Sbjct: 365 GQL 367



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 15/207 (7%)

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSA 331
           + ++AG +  +A+  +G V+S+G   N  LG G   +   P      + KG++ +  +SA
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSP-----VQVKGLNGITAISA 92

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           G  H VAL S G V+TWG GY G LG G    +T P P++ L    A  + A    T  L
Sbjct: 93  GWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTGITA--ISAGWNHTLAL 150

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRG 450
              G+++ +G   +G LG  +   S+  L+ P  +       ++ IS+G  H++V+ + G
Sbjct: 151 KADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQI------GITSISSGGGHSLVIKNDG 204

Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
            ++ +G N   QLG+ T      P +I
Sbjct: 205 TVWSWGCNNFGQLGNGTNSNNPTPHQI 231



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 20/271 (7%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I+ G  HTL L ++ +++S G +  G LG G  T   +    +  P    +  +S+   H
Sbjct: 140 ISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNI---PLQVPGQIGITSISSGGGH 196

Query: 176 AAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           +  +   G V++ G N+    G+  ++N P   P  +  L G+    V+AG+  +  L  
Sbjct: 197 SLVIKNDGTVWSWGCNNFGQLGNGTNSNNP--TPHQISGLNGI--INVSAGVIHSTALKS 252

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVY 292
            G V   G N  G+L +G+ +D     S  P++  G   ++ I AG  +  A+  +G  +
Sbjct: 253 DGTVWNWGCNFRGELANGNKID-----SYIPVQANGLNGIIAITAGWEFSSAIKSDGTFW 307

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G      LG+G + D   P  + +       +  +  G  + VAL + G ++ +G+  
Sbjct: 308 VWGVNDYGQLGNGSKSDVTSPMQVSSLS----GITAIDTGATYTVALKTDGNIFAFGENT 363

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
            G LG+G     T PE +S   +++A    A
Sbjct: 364 YGQLGNGTTTGSTTPELVSIGDTYVATDKSA 394


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 148/321 (46%), Gaps = 11/321 (3%)

Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
           +  ++H+ Q+SA E H  ++  +G ++TCG N     G +  +     P LV+  KG   
Sbjct: 31  WKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTL 90

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAG 278
             +  GL  +  L   G   + GS++ GQLG    +  +  PK I  L    +V+Q+A G
Sbjct: 91  STIACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTL-ATKNVIQVACG 149

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
             + + +T NG +Y++G+ S    G G + + E  P+A+ +    GI +  ++ G  H  
Sbjct: 150 SYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSIL--GIPIALIACGSNHTF 207

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGS 396
           AL  SG V+ WGK   G LG  D   +  P  L +L++     + C      F+ +D G 
Sbjct: 208 ALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLD-GG 266

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           V+  G   +G  G    G +   L PR +  L    V+Q++ G  H +      R+   G
Sbjct: 267 VFTCGAGEYGQTG---HGNTKDELVPRKVMELMGSTVTQVACGRRHMLCRVGE-RILACG 322

Query: 457 DNERAQLGHDTLRGCLEPTEI 477
              R QLG   +   L PT +
Sbjct: 323 YGARGQLGCPHMAFALVPTPV 343



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 154/334 (46%), Gaps = 15/334 (4%)

Query: 81  ELLNRCNGNWKRVLR-FLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSS 138
           EL   C GN   V++  L   + SS I         QI+ G +HTL +SN+  +++CGS+
Sbjct: 11  ELCIECPGNLDLVIKPTLSKWKESSHI--------QQISAGEFHTLYLSNNGHLYTCGSN 62

Query: 139 LCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 198
             G LG    +    S   ++      +  ++    H+  + + GQ F+ G +S    G 
Sbjct: 63  EVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGS 122

Query: 199 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 258
              +    +P++++ L      QV  G   T  LT  G ++  G+N++GQ G G+  ++ 
Sbjct: 123 NLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKE 182

Query: 259 -TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
            TP++++ +  +  +  IA G ++  A++ +G V+ +G  S+  LG  ++     P  ++
Sbjct: 183 TTPQALSSILGI-PIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLK 241

Query: 318 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 377
           T R   + V  +S G++    L   G V+T G G  G  GHG+  D+ +P  +  L    
Sbjct: 242 TLR--NVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGST 299

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             QV   +R     V    +   G+   G LG P
Sbjct: 300 VTQVACGRRHMLCRVGE-RILACGYGARGQLGCP 332



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 13/71 (18%)

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-------- 465
           G  D V++P +     + H+ QIS G +HT+ +++ G L+  G NE  QLG         
Sbjct: 18  GNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGT 77

Query: 466 -----DTLRGC 471
                DT +GC
Sbjct: 78  SPVLVDTFKGC 88


>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
           rubripes]
          Length = 531

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNG 289
           ++T    V+  G N    LG GD+     PK +  L     V +   +GP  +LA T +G
Sbjct: 36  YITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKVDILSGRKVVSLSYGSGPHILLA-TEDG 94

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            ++++G      LG+G  +  + P  +      RK   V  V+ G  H +AL  SG VY 
Sbjct: 95  ELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRK---VTEVACGSHHSMALTDSGEVYA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +SS L++ +AV +   +  +  +VD G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  L +L+   V Q+ +G  H++ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPCRLVALQGLCVQQVVSGYAHSLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P +I  ++
Sbjct: 269 NKSNQLSPVQIMTEK 283



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 9/288 (3%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQC-VSFTRINFPSAAHVVQVS-ASENH 175
           T+      + S+  V++ G +    LG G   +QC +   +++  S   VV +S  S  H
Sbjct: 29  TSANEAIYITSDDEVYAFGLNCSNCLGTGD--SQCTIVPKKVDILSGRKVVSLSYGSGPH 86

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTI 234
                + G++F  G N     G+  TN+ +  P LV A L      +V  G + +  LT 
Sbjct: 87  ILLATEDGELFAWGHNGYSQLGNGTTNQGV-APVLVSATLLNRKVTEVACGSHHSMALTD 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V+  G N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +
Sbjct: 146 SGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +     +G+ V +V +G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRLVAL--QGLCVQQVVSGYAHSLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ ++  P  + + K  +  +  C     +     +G VY +G
Sbjct: 264 QLGTGNKSNQLSPVQIMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 74/156 (47%), Gaps = 9/156 (5%)

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
           + P+ + T R+   +V   SA +   + + S   VY +G      LG GD     +P+ +
Sbjct: 13  MSPQELSTIRKA--YVFGTSANE--AIYITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKV 68

Query: 371 SSLKSHLAVQVCARKRKTFVLV-DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD-SL 428
             L     V +        +L  + G ++ +G  G+  LG    G +++ + P ++  +L
Sbjct: 69  DILSGRKVVSLSYGSGPHILLATEDGELFAWGHNGYSQLG---NGTTNQGVAPVLVSATL 125

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               V++++ G +H++ +TD G ++ +G N   Q+G
Sbjct: 126 LNRKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVG 161


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 141/301 (46%), Gaps = 17/301 (5%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I +G  HT+ L S   V+SCGS+  G LG   + +QC       F  A  +  V+A +
Sbjct: 34  ISIASGLRHTVYLTSTRKVYSCGSNEFGQLGQ--QKSQCRPSLVTGF-GAEEIFHVAAGD 90

Query: 174 NHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             +  + +SG +F  G   N    C        +  P+L++ +      QV  G      
Sbjct: 91  FFSIAIAESGLLFGWGRSLNGELMCKQDS----LHEPKLLDKIMHWSVVQVACGAQHCIA 146

Query: 232 LTIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           LT  G + + GSNT GQLG G + ++   P  IA L     + QI AG  +   ++ +G 
Sbjct: 147 LTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAF-PISQICAGAYHSGVLSPSGT 205

Query: 291 VYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           ++++G  +   LGHG   D  Q  PR ++T R +   VV V+ G+EH V    +G V++W
Sbjct: 206 LFTWGKNNWGQLGHGNS-DSFQSSPRLVKTLRHQ--EVVFVAMGEEHSVCRTRNGGVFSW 262

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G G  G LGH    + T P+ +  L      Q+C  +R T  L D   + GFG      L
Sbjct: 263 GHGGNGQLGHNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQL 322

Query: 409 G 409
           G
Sbjct: 323 G 323



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 23/265 (8%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           + +GL  T +LT    V++CGSN  GQLG   +  RP+  +    EE+     +AAG  +
Sbjct: 36  IASGLRHTVYLTSTRKVYSCGSNEFGQLGQQKSQCRPSLVTGFGAEEI---FHVAAGDFF 92

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGE---QHDEL-QPRAIQTFRRKGIH--VVRVSAGDEH 335
            +A+  +G+++ +G   N     GE   + D L +P+ +     K +H  VV+V+ G +H
Sbjct: 93  SIAIAESGLLFGWGRSLN-----GELMCKQDSLHEPKLLD----KIMHWSVVQVACGAQH 143

Query: 336 VVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
            +AL   G + +WG    G LG G  EI+   P  ++SL +    Q+CA    + VL  +
Sbjct: 144 CIALTEEGTILSWGSNTQGQLGLGSSEIEFLEPTIIASLNAFPISQICAGAYHSGVLSPS 203

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           G+++ +G   +G LG    G SD     PR++ +LR   V  ++ G  H+V  T  G +F
Sbjct: 204 GTLFTWGKNNWGQLG---HGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVF 260

Query: 454 GFGDNERAQLGHDTLRGCLEPTEIF 478
            +G     QLGH+++    +P +I 
Sbjct: 261 SWGHGGNGQLGHNSMANVTQPKKIM 285



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 152/338 (44%), Gaps = 20/338 (5%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           ++  G +  G LG G E       + I+  +   V+ +++   H  ++  + +V++CG N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISCPSPID--ANQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 250
                G     +   RP LV          V AG  F+  +   G +   G + +G+L  
Sbjct: 59  E---FGQLGQQKSQCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMC 115

Query: 251 HGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
             D+L  P       L+++   SVVQ+A G  + +A+T  G + S+GS +   LG G   
Sbjct: 116 KQDSLHEP-----KLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSE 170

Query: 309 DE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTL 366
            E L+P  I +       + ++ AG  H   L  SG ++TWGK   G LGHG+    ++ 
Sbjct: 171 IEFLEPTIIASLN--AFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSS 228

Query: 367 PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD 426
           P  + +L+    V V   +  +      G V+ +G  G G LG         V +P+ + 
Sbjct: 229 PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMA---NVTQPKKIM 285

Query: 427 SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            L    V QI  G  HT+ +TD+ +L GFG N   QLG
Sbjct: 286 ELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLG 323



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 17/228 (7%)

Query: 242 GSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           G N +GQLG G + +    P   +P++   SV+ IA+G  + + +T    VYS GS    
Sbjct: 5   GKNDYGQLGLGSENMLISCP---SPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNE-- 59

Query: 301 CLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             G  G+Q  + +P  +  F  +   +  V+AGD   +A+  SG ++ WG+   G L   
Sbjct: 60  -FGQLGQQKSQCRPSLVTGFGAE--EIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCK 116

Query: 360 DEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
            +   +L EP  L  +     VQV    +    L + G++  +G    G LG     +  
Sbjct: 117 QD---SLHEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQLGLGSSEI-- 171

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           + L P I+ SL A  +SQI  G YH+ V++  G LF +G N   QLGH
Sbjct: 172 EFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGH 219


>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 382

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 166/377 (44%), Gaps = 22/377 (5%)

Query: 93  VLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQ 151
            LR ++    +  +     G ++ ++ G  H+L + ++ SV++ G+S  G+   G  + +
Sbjct: 13  ALREVERPRSAPPLGRAGEGPRVPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRR 72

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
              F  +  P  + +V V+A   H+  V   G ++T G N     G   T      P  V
Sbjct: 73  ---FAPVPVPGLSDIVSVAAGGAHSLAVRADGTLWTWGGNPYGQLGDGTTTARAL-PVQV 128

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
             L GV  + V  GL  +  L   G V   G N  GQLG G T    TP+   P+  +  
Sbjct: 129 AGLSGV--RAVATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPR---PIPGLSG 183

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  +AAG  + L V  +  V+++GS     LG G       PRAI   R    +V  V+ 
Sbjct: 184 VRSVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTSRRAVPRAIPGLR----NVASVAG 239

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR-KTFV 390
           G  H +A+ + G +  WG    G LG G   ++  P P+  L     V+  A     +  
Sbjct: 240 GCYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPRPVPGLS---GVRCVATSFFHSLA 296

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L   G+V+ +G  G+G  G  D   S +   PR +  L    V  ++TG +H++ V   G
Sbjct: 297 LRAEGTVWAWGLNGYGEQG--DGTASRQSPTPRPVPGLSG--VLSVATGTFHSLAVNTNG 352

Query: 451 RLFGFGDNERAQLGHDT 467
            +  +G N + QLG  T
Sbjct: 353 TVSAWGHNGQGQLGDGT 369



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 120/279 (43%), Gaps = 15/279 (5%)

Query: 199 RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP 258
           R+  RP   P L  A +G P   ++AG + +  +   G V   G++  G    G    R 
Sbjct: 15  REVERPRSAPPLGRAGEG-PRVPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRF 73

Query: 259 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 318
            P    P+  +  +V +AAG ++ LAV  +G ++++G      LG G       P  +Q 
Sbjct: 74  AP---VPVPGLSDIVSVAAGGAHSLAVRADGTLWTWGGNPYGQLGDGTTTARALP--VQV 128

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA 378
               G+  V    G  H +AL + G V+ WG    G LG G       P P+  L     
Sbjct: 129 AGLSGVRAVATGLG--HSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSG--V 184

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
             V A    + V+ D  +V+ +G   +G LG    G + +   PR +  LR  +V+ ++ 
Sbjct: 185 RSVAAGGFHSLVVRDDDTVWAWGSNDYGELG---DGSTSRRAVPRAIPGLR--NVASVAG 239

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           G YH++ V   G L  +G N   QLG  T      P  +
Sbjct: 240 GCYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPRPV 278



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 17/254 (6%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           + TG  H+L L ++ +V++ G +  G LG G  T+Q ++   I  P  + V  V+A   H
Sbjct: 137 VATGLGHSLALRADGTVWAWGLNQFGQLGDG-TTSQWLTPRPI--PGLSGVRSVAAGGFH 193

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  V     V+  G N     G   T+R    PR +  L+ V    V  G   +  +   
Sbjct: 194 SLVVRDDDTVWAWGSNDYGELGDGSTSRRAV-PRAIPGLRNV--ASVAGGCYHSLAVHAD 250

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G +   G N++GQLG G   +R TP+   P+  +  V  +A    + LA+   G V+++G
Sbjct: 251 GTLSAWGLNSYGQLGDGTFSNRATPR---PVPGLSGVRCVATSFFHSLALRAEGTVWAWG 307

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRR-KGIH-VVRVSAGDEHVVALDSSGYVYTWGKGYC 353
                  G+GEQ D    R   T R   G+  V+ V+ G  H +A++++G V  WG    
Sbjct: 308 -----LNGYGEQGDGTASRQSPTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAWGHNGQ 362

Query: 354 GALGHGDEIDKTLP 367
           G LG G    ++ P
Sbjct: 363 GQLGDGTATHRSTP 376



 Score = 38.9 bits (89), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 6/152 (3%)

Query: 113 NQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N   +  G YH+L + ++ ++ + G +  G LG G  + +    T    P  + V  V+ 
Sbjct: 233 NVASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRA---TPRPVPGLSGVRCVAT 289

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S  H+  +   G V+  G N     G    +R    PR V  L GV    V  G   +  
Sbjct: 290 SFFHSLALRAEGTVWAWGLNGYGEQGDGTASRQSPTPRPVPGLSGV--LSVATGTFHSLA 347

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           +   G V   G N  GQLG G    R TP ++
Sbjct: 348 VNTNGTVSAWGHNGQGQLGDGTATHRSTPVTV 379


>gi|17510153|ref|NP_490834.1| Protein HERC-1 [Caenorhabditis elegans]
 gi|351051254|emb|CCD73459.1| Protein HERC-1 [Caenorhabditis elegans]
          Length = 1019

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 139/302 (46%), Gaps = 18/302 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  V+  E H  F+ + G++++ G N     G        F    V         Q++AG
Sbjct: 43  VTSVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAG 102

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            + T  +T  G V   GSN HGQLG       + TP+ +   +E+  +VQ+A+G ++ +A
Sbjct: 103 RSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRV---QEINDIVQVASGSNHCIA 159

Query: 285 VTGNGVVYSFGSGSN-FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           +   G V+ +G  ++  C+   E  ++L           G+ +VRV AG  H +AL +SG
Sbjct: 160 LDEGGRVFVWGEQADGRCIHRPEPVEQL----------SGVPIVRVLAGARHCLALSASG 209

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            V+TWG+   G LG  D   +T  + +  +     V+       T +L   G  + FG  
Sbjct: 210 AVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSD 269

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G  GF  +   +K   P  +  L   HV++I+ G  HT+ +  +G  + FG N   QL
Sbjct: 270 ALGQCGFGKK--VEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQL 326

Query: 464 GH 465
           G+
Sbjct: 327 GN 328



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 159/345 (46%), Gaps = 34/345 (9%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +T G  HT+ ++ +  ++S GS++ G LG G  T    S   +++ S+A ++Q+SA  +H
Sbjct: 46  VTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSH 105

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              V   G+VF  G N     G          PR V+ +  +   QV +G N    L   
Sbjct: 106 TVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDI--VQVASGSNHCIALDEG 163

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYS 293
           G V   G    G+  H     RP      P+E++  V  V++ AG  + LA++ +G V++
Sbjct: 164 GRVFVWGEQADGRCIH-----RP-----EPVEQLSGVPIVRVLAGARHCLALSASGAVFT 213

Query: 294 FGSGSNFCLGHGEQHDELQPR-AIQ-TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +G  ++  LG     D+L+P+ ++Q   +  G+ VV  + GD H V L   G  +++G  
Sbjct: 214 WGQNNSGELG----IDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSD 269

Query: 352 YCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
             G  G G +++K T P  +S L      ++ A    T  +   G+ Y FG    G LG 
Sbjct: 270 ALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLG- 327

Query: 411 PDRGVSDKVL---RPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
                + K++    PR  D L   HV+ +  G + T  V   G +
Sbjct: 328 -----NGKIMTQSTPRKTDEL--DHVTGVFAGYHQTFFVRSSGTI 365



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 142/291 (48%), Gaps = 18/291 (6%)

Query: 109 TSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV 167
           TS+   +QI+ GR HT+ +++   VF+ GS+  G LG   + T   +  R+       +V
Sbjct: 91  TSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQ--EINDIV 148

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           QV++  NH   + + G+VF  G+ +   C H        RP  VE L GVP  +V AG  
Sbjct: 149 QVASGSNHCIALDEGGRVFVWGEQADGRCIH--------RPEPVEQLSGVPIVRVLAGAR 200

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
               L+  G V T G N  G+LG  D   + + + +  ++ +G VV+ A G ++ + +T 
Sbjct: 201 HCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLG-VVEAACGDNHTVLLTH 259

Query: 288 NGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            G  +SFGS +    G G++ ++   P A+      G HV R++AG  H +A+   G  Y
Sbjct: 260 CGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDL--IGSHVTRIAAGACHTIAI-CKGAPY 316

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
            +G    G LG+G  + ++ P     L       V A   +TF +  +G++
Sbjct: 317 PFGLNSSGQLGNGKIMTQSTPRKTDELDH--VTGVFAGYHQTFFVRSSGTI 365


>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
 gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
          Length = 1160

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 168/377 (44%), Gaps = 24/377 (6%)

Query: 121  RYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV----VQVSASENH 175
            R  TL + S+ + ++ G +  G LG G   TQ      +  P+ A      VQVSA +  
Sbjct: 676  RGFTLAVGSDGNAYAWGRNNYGQLGDG-TLTQRNKPVIVKKPAGASADFTYVQVSAGDEQ 734

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV----EALKGVPCKQVTAGLNFTGF 231
            +  V   G V+  G+N S   G+  +      P  V    +   G+   QV+AG   +  
Sbjct: 735  SLAVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLA 794

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNG 289
            L  RG++   G N  G+LG+G+ ++   P       + G+V  +Q++ G  +  A+   G
Sbjct: 795  LDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKG 854

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTW 348
              +S+G      LG+G   D   P  +Q  R  G +  ++VSAG +H + +D+ G  + W
Sbjct: 855  NTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTKGNTWAW 914

Query: 349  GKGYCGALGHGDEIDKTLPEP-----LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            G    G LG+G       P P       +  +  A+QV A    +  +   G+ + +G  
Sbjct: 915  GWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGN 974

Query: 404  GFGSLGFPDRGVSDKVLRPRILDSLR---AHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
              G LG    G + K   P ++   +   A    Q+S G YH++ +   G+ + +G N+ 
Sbjct: 975  DSGELGI---GTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQF 1031

Query: 461  AQLGHDTLRGCLEPTEI 477
             QLG+ T+     PT +
Sbjct: 1032 GQLGNGTISNSSIPTPV 1048



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 146/317 (46%), Gaps = 26/317 (8%)

Query: 70   IYAGMSRNVQIELLNRCNGNWKRV-LRFLQSVEHSSDIVETSAGNQMQITTGRYHTL-LI 127
            +YA    N   +L N  +G +  V LR +   +  S +        +Q++ G YH+L L 
Sbjct: 744  VYA-WGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTA------VQVSAGYYHSLALD 796

Query: 128  SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV---QVSASENHAAFVLQSGQ 184
            +  ++++ G +  G LG+G      +  T   +P  A  V   QVS   +H A +   G 
Sbjct: 797  ARGNIWAWGFNQFGELGNGNNINSAIP-TLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGN 855

Query: 185  VFTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
             ++ G N     G+ +        P+  PR    ++ +   QV+AG + +  +  +G+  
Sbjct: 856  TWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAI---QVSAGADHSLIIDTKGNTW 912

Query: 240  TCGSNTHGQLGHGDTLD--RPTPKSIAPLEEVGSV--VQIAAGPSYMLAVTGNGVVYSFG 295
              G N  G+LG+G +     P P  +   E  G+V  +Q++AG  + LA+  NG  +++G
Sbjct: 913  AWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWG 972

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
               +  LG G       P  +Q  +  G +  V+VSAG  H + +D  G  + WG    G
Sbjct: 973  GNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGKTWAWGYNQFG 1032

Query: 355  ALGHGDEIDKTLPEPLS 371
             LG+G   + ++P P++
Sbjct: 1033 QLGNGTISNSSIPTPVA 1049


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 161/364 (44%), Gaps = 21/364 (5%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G  H L L+S+ +V + G +  G LG G  T +      +       VV ++A E
Sbjct: 148 VAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTG---VVAIAAGE 204

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           NH+  VL  G V   G+N+    G   T +    P LV +L GV    + AG N +  + 
Sbjct: 205 NHSLAVLADGTVRAWGNNTYGRLGDGTTTQRT-SPVLVSSLTGVTA--IAAGANHSLAVL 261

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N  G+LG G T  R TP ++  L     V +I+AG  + LA+  +G   +
Sbjct: 262 ADGTVRAWGYNASGRLGDGTTTQRATPVAVPGLT---GVTEISAGGGHSLALLADGTARA 318

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +GS  +  LG G   +   P  + +       V  +SAG  H +AL + G    WG    
Sbjct: 319 WGSNVSGQLGDGTVSNRTSPVLVSSL----TGVTALSAGGNHSLALLADGTARAWGANVS 374

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G    +TLP  L  L    A+   A    +  ++  G+V  +G   +G LG    
Sbjct: 375 GQLGDGTTTQRTLPVGLPGLTGVAAL--AAGGYHSLAVLANGTVRAWGHNTYGQLG---D 429

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G + +   P ++ +L    V  ++ G  H++ +   G +  +G+N   QLG  T      
Sbjct: 430 GSTAQRTAPVVVPALTG--VVSLTAGYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGT 487

Query: 474 PTEI 477
           P ++
Sbjct: 488 PVQV 491



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 161/355 (45%), Gaps = 29/355 (8%)

Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G YH+L +++N +V + G +  G LG G    +      +  P+   VV ++A  +H
Sbjct: 400 LAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAP---VVVPALTGVVSLTAGYDH 456

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNR---PIFRPRL--VEALKGVPCKQVTAGLNFTG 230
           +  +L  G V   G+N+S   G   TN+   P+    L  V AL G       A      
Sbjct: 457 SLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTNVVALSGGKLYHALA------ 510

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            L   G V   G N +GQLG G T +R TP +++ L  V   V IAAG  Y LA+  NG 
Sbjct: 511 -LLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGLTNV---VAIAAGGDYSLALQSNGT 566

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V S+G G    LG         P+A+        +VV ++AG  HV+AL + G VY WG+
Sbjct: 567 VQSWGYGVYGPLGRDYDTYSPTPKAVPGV----TNVVAIAAGANHVLALRADGTVYAWGR 622

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG G  + +  P  +  L +   V +      +  L   G+VY +G+     LG 
Sbjct: 623 NDFGQLGDGTTVQRNTPVQVPGLTN--VVAIATGWDHSLALRADGTVYAWGYNYARQLG- 679

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            D   ++    P  +  L   +V  ++ G   ++ +   G +  +GDN   +LG+
Sbjct: 680 -DGSTANYRQTPAPVPGLT--NVVAVTAGGNQSLALLSSGAVHAWGDNSHGELGN 731



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 154/345 (44%), Gaps = 20/345 (5%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G Y   L+ + +V + G++  G LG G  T    S   +  P  + VV ++A  NHA  +
Sbjct: 104 GEYSLALLGDGTVRAWGNNTYGQLGDG-TTPHRASPGAV--PGLSGVVAIAAGNNHALAL 160

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
           L  G V   G N+    G   T +    P  V  L GV    + AG N +  +   G V 
Sbjct: 161 LSDGTVRAWGYNAYGQLGDGTTTQ-RRTPVAVLGLTGVVA--IAAGENHSLAVLADGTVR 217

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
             G+NT+G+LG G T  R +P  ++ L     V  IAAG ++ LAV  +G V ++G  ++
Sbjct: 218 AWGNNTYGRLGDGTTTQRTSPVLVSSLT---GVTAIAAGANHSLAVLADGTVRAWGYNAS 274

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG G       P A+         V  +SAG  H +AL + G    WG    G LG G
Sbjct: 275 GRLGDGTTTQRATPVAVPGL----TGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDG 330

Query: 360 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
              ++T P  +SSL    A  + A    +  L+  G+   +G    G LG    G + + 
Sbjct: 331 TVSNRTSPVLVSSLTGVTA--LSAGGNHSLALLADGTARAWGANVSGQLG---DGTTTQR 385

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             P  L  L    V+ ++ G YH++ V   G +  +G N   QLG
Sbjct: 386 TLPVGLPGLTG--VAALAAGGYHSLAVLANGTVRAWGHNTYGQLG 428



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 146/324 (45%), Gaps = 19/324 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
            V++++ + H+      G V   GDN+S   G   T +    P  V  L G     V+AG
Sbjct: 47  AVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQ-RSSPTAVPGLAG--AVAVSAG 103

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             ++  L   G V   G+NT+GQLG G T  R +P ++  L     VV IAAG ++ LA+
Sbjct: 104 GEYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGLS---GVVAIAAGNNHALAL 160

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             +G V ++G  +   LG G       P A+         VV ++AG+ H +A+ + G V
Sbjct: 161 LSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGL----TGVVAIAAGENHSLAVLADGTV 216

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
             WG    G LG G    +T P  +SSL    A+   A      VL D G+V  +G+   
Sbjct: 217 RAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGA-NHSLAVLAD-GTVRAWGYNAS 274

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G LG    G + +   P  +  L    V++IS G  H++ +   G    +G N   QLG 
Sbjct: 275 GRLG---DGTTTQRATPVAVPGLTG--VTEISAGGGHSLALLADGTARAWGSNVSGQLGD 329

Query: 466 DTLRGCLEPTEIFIQEMEEDTGLA 489
            T+     P  + +  +   T L+
Sbjct: 330 GTVSNRTSP--VLVSSLTGVTALS 351



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 162/365 (44%), Gaps = 22/365 (6%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G  H+L ++++ +V + G++  G LG G  TTQ  S   ++  S   V  ++A  
Sbjct: 198 VAIAAGENHSLAVLADGTVRAWGNNTYGRLGDG-TTTQRTSPVLVS--SLTGVTAIAAGA 254

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           NH+  VL  G V   G N+S   G   T +    P  V  L GV   +++AG   +  L 
Sbjct: 255 NHSLAVLADGTVRAWGYNASGRLGDGTTTQRAT-PVAVPGLTGV--TEISAGGGHSLALL 311

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G     GSN  GQLG G   +R +P  ++ L     V  ++AG ++ LA+  +G   +
Sbjct: 312 ADGTARAWGSNVSGQLGDGTVSNRTSPVLVSSLT---GVTALSAGGNHSLALLADGTARA 368

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+  +  LG G       P  +         V  ++AG  H +A+ ++G V  WG    
Sbjct: 369 WGANVSGQLGDGTTTQRTLPVGLPGL----TGVAALAAGGYHSLAVLANGTVRAWGHNTY 424

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG G    +T P  + +L     V + A    +  L+  G+V  +G    G LG    
Sbjct: 425 GQLGDGSTAQRTAPVVVPALTG--VVSLTAGYDHSLALLSDGTVRAWGNNASGQLG---D 479

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTG-LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           G +++   P  +  L   +V  +S G LYH + +   G +  +G N   QLG  +     
Sbjct: 480 GTTNQRGTPVQVSGLT--NVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRW 537

Query: 473 EPTEI 477
            P  +
Sbjct: 538 TPVAV 542



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 20/263 (7%)

Query: 113 NQMQITTGR-YHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 170
           N + ++ G+ YH L L+S+ +V + G ++ G LG G  + +   +T +      +VV ++
Sbjct: 496 NVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNR---WTPVAVSGLTNVVAIA 552

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-DTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           A  +++  +  +G V + G       G   DT  P   P+ V  +  V    + AG N  
Sbjct: 553 AGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPT--PKAVPGVTNVVA--IAAGANHV 608

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             L   G V+  G N  GQLG G T+ R TP  +  L  V   V IA G  + LA+  +G
Sbjct: 609 LALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLTNV---VAIATGWDHSLALRADG 665

Query: 290 VVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
            VY++G      LG G   +  Q P  +        +VV V+AG    +AL SSG V+ W
Sbjct: 666 TVYAWGYNYARQLGDGSTANYRQTPAPVPGL----TNVVAVTAGGNQSLALLSSGAVHAW 721

Query: 349 GKGYCGALGHGDEIDKTLPEPLS 371
           G    G LG+G  +  T P P++
Sbjct: 722 GDNSHGELGNGSTL--TPPAPVA 742



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 6/155 (3%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N + I  G  H L L ++ +V++ G +  G LG G   T     T +  P   +VV ++ 
Sbjct: 597 NVVAIAAGANHVLALRADGTVYAWGRNDFGQLGDG---TTVQRNTPVQVPGLTNVVAIAT 653

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             +H+  +   G V+  G N +   G   T      P  V  L  V    VTAG N +  
Sbjct: 654 GWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVA--VTAGGNQSLA 711

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           L   G VH  G N+HG+LG+G TL  P P ++  L
Sbjct: 712 LLSSGAVHAWGDNSHGELGNGSTLTPPAPVAVTGL 746


>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
          Length = 531

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 468 LRGCLEPTEIFIQE 481
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           LT   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           ++++G  +   +G G   ++  PR I         VV ++ G    +A+  SG VY WG 
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKITNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 411 PDRGVSDKVLRP 422
              G  + +L P
Sbjct: 267 --TGSKNNLLSP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            +   G N  GQ+G G T ++PTP+ I        VV IA G +  +AV  +G VY +G 
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 357 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQ 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  VL SG+V+  G N +   G    N     P  V AL G+   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALT 249

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 291
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 292 YSFG 295
           Y +G
Sbjct: 308 YMWG 311


>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 992

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 4/207 (1%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            V+Q++  + H+  +   GQ+F  G+N+    G R        PR +++L G+P  Q++A
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISA 178

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G N +  L++ G V   G N+ GQLG GDT DR  P  +  L+    +V I+ G  +  A
Sbjct: 179 GGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKR-KKIVSISCGGEHTAA 237

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSG 343
           +   G V++FGSG    LGH    DE  PR +      G  V +V+ G  H +V+  S  
Sbjct: 238 LAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELW--GSKVSQVTCGRNHTLVSTASPK 295

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPL 370
            +Y++G G  G LG+G+++ +++P P+
Sbjct: 296 LIYSFGCGMQGQLGNGEQVKQSVPLPV 322



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 109/218 (50%), Gaps = 17/218 (7%)

Query: 255 LDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDEL 311
           +D+ T    +PL+  E   V+QIA G  + +A+T +G ++ +G  +   LG   EQ    
Sbjct: 103 MDKST--ECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQ 160

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
            PR +Q+    GI V ++SAG  H   L  SG V+ WG    G LG GD  D+ +P  ++
Sbjct: 161 SPRHLQSL--CGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVN 218

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSL 428
           SLK    V +      T  L   G+V+ FG  GFG LG   F D         PR++  L
Sbjct: 219 SLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEH------HPRLVAEL 272

Query: 429 RAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLGH 465
               VSQ++ G  HT+V T   +L + FG   + QLG+
Sbjct: 273 WGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGN 310



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 105/230 (45%), Gaps = 8/230 (3%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI  G  H++ ++N   +F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 121 IQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAGG 180

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           NH+  +  SG VF  G NS+   G  DT    F P +V +LK      ++ G   T  L 
Sbjct: 181 NHSFVLSLSGVVFGWGGNSAGQLGLGDTTDR-FVPTVVNSLKRKKIVSISCGGEHTAALA 239

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGN-GVV 291
             G V T GS   GQLGH    D   P+ +A L   GS V Q+  G ++ L  T +  ++
Sbjct: 240 KGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAEL--WGSKVSQVTCGRNHTLVSTASPKLI 297

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQ--TFRRKGIHVVRVSAGDEHVVAL 339
           YSFG G    LG+GEQ  +  P  +   T       + ++ AG+ H  AL
Sbjct: 298 YSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFAL 347



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 4/146 (2%)

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCA 383
            V++++ GD+H +AL + G ++ WG+   G LG   E   T  P  L SL      Q+ A
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISA 178

Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
               +FVL  +G V+G+G    G LG  D   +D+ + P +++SL+   +  IS G  HT
Sbjct: 179 GGNHSFVLSLSGVVFGWGGNSAGQLGLGD--TTDRFV-PTVVNSLKRKKIVSISCGGEHT 235

Query: 444 VVVTDRGRLFGFGDNERAQLGHDTLR 469
             +   G +F FG     QLGH++ +
Sbjct: 236 AALAKGGTVFTFGSGGFGQLGHNSFK 261


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 141/323 (43%), Gaps = 20/323 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q+     H A   + G+VFT G+      GH  T+  I RP+LVE++       ++ G
Sbjct: 259 VNQIVCGSRHIALTTRQGEVFTWGEELGGRLGH-GTDTDISRPKLVESISVTIVDFISCG 317

Query: 226 LNFTGFLTIRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              T  ++  G +   G  ++  G LG+        PK ++ PLE +  V+ +A G  + 
Sbjct: 318 EFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGL-QVLFVACGSWHS 376

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS- 341
             +T  G +Y+FG G+   LGHG +     P+ ++     G   ++V+ G  H  A+   
Sbjct: 377 ALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEAL--NGFRTIKVACGVWHSAAIVEA 434

Query: 342 ---------SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                    S  +YTWG G    LG GD+  + +P  + +L  H   Q+   +  T  L 
Sbjct: 435 TVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACGQNMTVALA 494

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G VY  G    G LG P        L   + D L    V +IS G  H  V+T R  +
Sbjct: 495 TSGHVYTMGSSDNGQLGNPKSDGKQPCL---VKDKLAHELVEEISCGAAHVAVLTSRSEV 551

Query: 453 FGFGDNERAQLGHDTLRGCLEPT 475
           + +G     +LGH  L     PT
Sbjct: 552 YTWGMGANGRLGHGDLNDKKAPT 574



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 149/352 (42%), Gaps = 36/352 (10%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
           QI  G  H  L +    VF+ G  L G LGHG       P+  + +S T ++F       
Sbjct: 261 QIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDF------- 313

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFC--CGHRDTNRPIFRPRLVEA-LKGVPCKQVTA 224
            +S  E H   +  SG +F  GD S      G+ DT    + P+ V   L+G+    V  
Sbjct: 314 -ISCGEFHTCAISASGDLFNWGDGSYHAGLLGY-DTGASHWLPKRVSGPLEGLQVLFVAC 371

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   +  +T  G ++T G  T G LGHG+      PK +  L      +++A G  +  A
Sbjct: 372 GSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGF-RTIKVACGVWHSAA 430

Query: 285 V------TGNGVV----YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           +      TG  +V    Y++G G    LG G++   L P  +Q       H  +++ G  
Sbjct: 431 IVEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFH--QLACGQN 488

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
             VAL +SG+VYT G    G LG+     K        L   L  ++        VL   
Sbjct: 489 MTVALATSGHVYTMGSSDNGQLGNPKSDGKQPCLVKDKLAHELVEEISCGAAHVAVLTSR 548

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
             VY +G    G LG  D  ++DK   P I+++L+  HV  IS G   T  +
Sbjct: 549 SEVYTWGMGANGRLGHGD--LNDKKA-PTIVEALKDRHVKSISCGSNFTTCI 597



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 16/293 (5%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  P+ +E+   +   Q+  G       T +G V T G    G+LGHG   D   PK + 
Sbjct: 245 VLIPKPLESDVVLDVNQIVCGSRHIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVE 304

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRK 322
            +  V  V  I+ G  +  A++ +G ++++G GS     LG+        P+ + +   +
Sbjct: 305 SI-SVTIVDFISCGEFHTCAISASGDLFNWGDGSYHAGLLGYDTGASHWLPKRV-SGPLE 362

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVC 382
           G+ V+ V+ G  H   + S+G +YT+G G  GALGHG+      P+ + +L     ++V 
Sbjct: 363 GLQVLFVACGSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVA 422

Query: 383 ARKRKTFVLVDTGSVYG--------FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
                +  +V+     G        + W G G      +G  +  L P  + +L  H+  
Sbjct: 423 CGVWHSAAIVEATVQTGMNMVSKKLYTW-GDGDKNRLGQGDKEARLIPTCVQALLEHNFH 481

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGH---DTLRGCLEPTEIFIQEMEE 484
           Q++ G   TV +   G ++  G ++  QLG+   D  + CL   ++  + +EE
Sbjct: 482 QLACGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKQPCLVKDKLAHELVEE 534


>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
 gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
          Length = 474

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 159/371 (42%), Gaps = 43/371 (11%)

Query: 123 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           H++LI  N   F+ G +    LGHG +T  C   T++   +  +V+Q +   NH  F+  
Sbjct: 117 HSVLIDENWKAFTFGRNQLSQLGHG-DTVTCEKPTQVADLADFNVIQAACGRNHTLFLTD 175

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
           +G V+ CGDN S  CG  +    I  P  + +  G P  +V  G  F+  L I+G++HT 
Sbjct: 176 TGTVYACGDNKSGQCGVGNKLPTITSPTRI-SYNGPPIIKVGCGAEFSVILDIKGNLHTF 234

Query: 242 GSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGSVVQIAA 277
           G   +GQLGH                           +++     + P+E V +++  A 
Sbjct: 235 GLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENV-NIIDFAC 293

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G ++ +A+      YS+G G    LGH EQ DE+ PR I+ F  +   V+RV  G  + +
Sbjct: 294 GNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRKVMRVFCGSSYSL 353

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           A+   G +Y +G+      G  +      P+P+  L       +        +  D   +
Sbjct: 354 AISDIGSLYLFGQN--KKTGEAN----MYPKPVQDLAGWNITSIGTGYTSIVISADDSLI 407

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
                  +G LG  D   S     P+ +  +    +  ++ G  H++++ +        +
Sbjct: 408 AWGASPTYGELGLGDLQKSSST--PKEVTRMEGMKIPMVALGYSHSMLLVNT-------E 458

Query: 458 NERAQLGHDTL 468
           +E+ +  +D L
Sbjct: 459 HEKTKEKYDNL 469



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 134/310 (43%), Gaps = 38/310 (12%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S  H+  + ++ + FT G N     GH DT     +P  V  L      Q   G N T F
Sbjct: 114 SAAHSVLIDENWKAFTFGRNQLSQLGHGDT-VTCEKPTQVADLADFNVIQAACGRNHTLF 172

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGV 290
           LT  G V+ CG N  GQ G G+ L  PT  S   +   G  ++++  G  + + +   G 
Sbjct: 173 LTDTGTVYACGDNKSGQCGVGNKL--PTITSPTRISYNGPPIIKVGCGAEFSVILDIKGN 230

Query: 291 VYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRK----------GIHVVR 328
           +++FG      LGH               H E QPR +  +  K           ++++ 
Sbjct: 231 LHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHVLPIENVNIID 290

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS--SLKSHLAVQVCARKR 386
            + G+ H VA+DS    Y+WG G  G LGH ++ D+ +P  +     ++   ++V     
Sbjct: 291 FACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNRKVMRVFCGSS 350

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            +  + D GS+Y FG          ++   +  + P+ +  L   +++ I TG Y ++V+
Sbjct: 351 YSLAISDIGSLYLFG---------QNKKTGEANMYPKPVQDLAGWNITSIGTG-YTSIVI 400

Query: 447 TDRGRLFGFG 456
           +    L  +G
Sbjct: 401 SADDSLIAWG 410



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 34/235 (14%)

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T G N   QLGHGDT+    P  +A L +  +V+Q A G ++ L +T  G VY+ G   +
Sbjct: 129 TFGRNQLSQLGHGDTVTCEKPTQVADLADF-NVIQAACGRNHTLFLTDTGTVYACGDNKS 187

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
              G G +   +      ++   G  +++V  G E  V LD  G ++T+G    G LGH 
Sbjct: 188 GQCGVGNKLPTITSPTRISYN--GPPIIKVGCGAEFSVILDIKGNLHTFGLPEYGQLGHN 245

Query: 360 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
            +    +    +S K     +   RK    VLV                 + ++     V
Sbjct: 246 TDGRYFV----NSTKMSFHFETQPRK----VLV-----------------YMEKNKEGHV 280

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           L       +   ++   + G  HTV +  + R + +G     +LGH   +  + P
Sbjct: 281 L------PIENVNIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVP 329


>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_b [Mus musculus]
          Length = 563

 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 68  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 125

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 126 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 184

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 185 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 244

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 245 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 301

Query: 468 LRGCLEPTEIFIQE 481
               L PT+I +++
Sbjct: 302 KNNLLSPTQIMVEK 315



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 61  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 119

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 120 LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 179

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +G 
Sbjct: 180 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 239

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 240 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 297

Query: 357 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 298 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 343


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 40/306 (13%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------R 257
           P  ++ L+     QV  G   T  + I+G+V++ G++  GQLG     D          +
Sbjct: 14  PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQ 73

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ----HDE--- 310
           PTP+ I  L+ V  V+QIA G ++ +A+T +G +YS+G G    LGH +      DE   
Sbjct: 74  PTPRIIELLQSV-KVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGC 132

Query: 311 -LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID------ 363
             QP+       K + V +V+ G  H VA+ ++G++Y+WG G CG LGH D         
Sbjct: 133 PYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADED 192

Query: 364 ----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
               + +P  +++LK    +        T VL D G +Y FG    G LGF +  +S   
Sbjct: 193 GYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGN--ISQMP 250

Query: 420 LR---------PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
           L          P+ ++SL+   +  +S G  H++ ++  G ++ +G+    QLG D +R 
Sbjct: 251 LDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRD 310

Query: 471 CLEPTE 476
             + T+
Sbjct: 311 LPKNTD 316



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 150/345 (43%), Gaps = 56/345 (16%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-----PETTQCVSFTR----INFPSAAH 165
           Q+  G  HT+ +    +V+S G+S CG LG       P   +   +      I    +  
Sbjct: 27  QVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQSVK 86

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-----------RPIFRPRLVEAL 214
           V+Q++  + H   + Q G++++ G       GH DT+           +P  +P+L+  L
Sbjct: 87  VIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQP--KPKLIVVL 144

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------RPTPKSIA 264
           K +  KQV  G   T  +   GH+++ G+   GQLGH DT            +P P+ + 
Sbjct: 145 KNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVT 204

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQ---------PR 314
            L+    ++  + G  + + +T  G +Y FG GS   LG G      L          P+
Sbjct: 205 ALKPF-KLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPK 263

Query: 315 AIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID----------K 364
            I++ +  GI +V +S GD H +AL   G+VY WG+   G LG  D  D          +
Sbjct: 264 KIESLQ--GIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQ 321

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             P+ + +L +   V +   +  T  L + G +Y FG    G LG
Sbjct: 322 PFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLG 366



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 135/293 (46%), Gaps = 36/293 (12%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----------R 257
           PR++E L+ V   Q+  G   T  LT  G +++ G    GQLGH DT            +
Sbjct: 76  PRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQ 135

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH----DE--- 310
           P PK I  L+ +  V Q+A G ++ +AV  NG +YS+G+G+   LGH +      DE   
Sbjct: 136 PKPKLIVVLKNL-EVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGY 194

Query: 311 -LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD------EID 363
             QP        K   ++  S GD H + L   G +Y +G G CG LG G+      ++D
Sbjct: 195 PYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVD 254

Query: 364 K----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD-----RG 414
                 +P+ + SL+    V +      +  L   G VY +G   +G LG  D     + 
Sbjct: 255 SCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKN 314

Query: 415 VSDKVLRP--RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             +K  +P  + + +L    +  IS G  HT+ +T+ G L+ FG N   QLG 
Sbjct: 315 TDNKPYQPFPQKVVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLGQ 367



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 111/236 (47%), Gaps = 32/236 (13%)

Query: 257 RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD------- 309
           +P P  I  L   G + Q+A G  + +AV   G VYS+G+ +   LG     D       
Sbjct: 11  QPHPLEIDMLRNKG-IYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEG 69

Query: 310 ---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD------ 360
              +  PR I+  +   + V++++ GD H VAL   G +Y+WG G CG LGH D      
Sbjct: 70  YPYQPTPRIIELLQ--SVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPK 127

Query: 361 EID----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD---- 412
           + D    +  P+ +  LK+    QV   K  T  +++ G +Y +G    G LG PD    
Sbjct: 128 DEDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSF 187

Query: 413 ----RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                G   + + PR + +L+   +   S G  HT+V+TD+G ++ FG     QLG
Sbjct: 188 PADEDGYPYQPI-PRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQLG 242


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 8/232 (3%)

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G +++CG N++G+LG GD ++R    S++ L     + Q+ +G   +  +T  GVV + G
Sbjct: 328 GELYSCGQNSYGELGTGDDIERHQLTSVS-LCGWDDIRQVVSGNETLAVLTNEGVVLTCG 386

Query: 296 SGSNFCLGHGEQHDE--LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
              +   G G   DE  +  R +Q  R + +  +  S G EH++AL  +G  Y+WG    
Sbjct: 387 LNKSGQCGQG-HFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDR 445

Query: 354 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
           G LGH +   K  +P+ + SLK             + V+ D G +Y FG    G LG   
Sbjct: 446 GQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDH 505

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              +     P+++ SL A  VS ++ GLYHT++ T  G LF  G N+  QLG
Sbjct: 506 ---TQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLG 554



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 136/290 (46%), Gaps = 18/290 (6%)

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRL--VEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
           SG++++CG NS    G   T   I R +L  V        +QV +G      LT  G V 
Sbjct: 327 SGELYSCGQNSY---GELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVL 383

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAA--GPSYMLAVTGNGVVYSFG 295
           TCG N  GQ G G   +R     + P++ + S  V  IAA  G  +M+A+T  G+ YS+G
Sbjct: 384 TCGLNKSGQCGQGHFDERVM--MLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWG 441

Query: 296 SGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
                 LGH     ++  P+ I++ + K +    VS    H   +  +G +YT+G   CG
Sbjct: 442 YNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSY--HHSAVITDAGELYTFGMNDCG 499

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG      ++ P+ + SL++     V      T +    G ++  G   +G LG     
Sbjct: 500 QLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGL---- 555

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             ++ ++   L +L    VS ++ G YH+VVV+  GR F FG N+  QLG
Sbjct: 556 AHNRQIKLPTLVALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLG 605



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 156/356 (43%), Gaps = 11/356 (3%)

Query: 128 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
           ++  ++SCG +  G LG G +  +    T ++      + QV +     A +   G V T
Sbjct: 326 ASGELYSCGQNSYGELGTGDDIERH-QLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLT 384

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIRGHVHTCGSNT 245
           CG N S  CG    +  +   R V+AL+    K + A  G      LT  G  ++ G N 
Sbjct: 385 CGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYND 444

Query: 246 HGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
            GQLGH +   +   PK I  L++   +   +    +   +T  G +Y+FG      LG 
Sbjct: 445 RGQLGHENLATKIHVPKLIESLKD-KKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGL 503

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
                +  P+ +++   +   V  V+ G  H +   ++G ++T GK   G LG       
Sbjct: 504 DHTQHQSTPQLVKSL--EATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQI 561

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
            LP  L +L + +   V      + V+   G  + FG   +G LG   + V   V  P +
Sbjct: 562 KLPT-LVALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSK-VHQNV--PNV 617

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
           +       + + + G YHTV+++++G+++ FG N + QLG+      L P  + ++
Sbjct: 618 VALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLPVPLKVR 673



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 11/347 (3%)

Query: 116 QITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE- 173
           Q+ +G     +++N  V  +CG +  G  G G    + +    +    +  V  ++AS  
Sbjct: 365 QVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNG 424

Query: 174 -NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H   +  +G  ++ G N     GH +    I  P+L+E+LK       +   + +  +
Sbjct: 425 CEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVI 484

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G ++T G N  GQLG   T  + TP+ +  LE    V  +A G  + +  T  G ++
Sbjct: 485 TDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEAT-EVSMVACGLYHTIICTAAGELF 543

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           + G      LG         P  +         V  V+ G  H V + + G  +++G+  
Sbjct: 544 TCGKNDYGQLGLAHNRQIKLPTLVALPNE---MVSFVACGYYHSVVVSTGGRAFSFGRND 600

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G ++ + +P  ++   +   V+       T +L + G VY FG    G LG  +
Sbjct: 601 YGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLG--N 658

Query: 413 RGVSDKVLRP--RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           RG +D +L    ++     +     ++ G Y T ++ +R R    GD
Sbjct: 659 RGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDDGD 705



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 23/238 (9%)

Query: 255 LDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 313
           L +  P S   LE  +  +  +   P Y      +G +YS G  S   LG G   D+++ 
Sbjct: 294 LMKQPPTSAVNLEMSIAKLAALKEQPMYG-KCEASGELYSCGQNSYGELGTG---DDIER 349

Query: 314 RAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWG---KGYCGALGHGDEIDKTLPEP 369
             + +    G   +R V +G+E +  L + G V T G    G CG  GH DE    L  P
Sbjct: 350 HQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQ-GHFDERVMML-RP 407

Query: 370 LSSLKSHLAVQVCARK--RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
           + +L+S     + A         L DTG  Y +G+   G LG     ++ K+  P++++S
Sbjct: 408 VQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGH--ENLATKIHVPKLIES 465

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD--------TLRGCLEPTEI 477
           L+   +   S   +H+ V+TD G L+ FG N+  QLG D         L   LE TE+
Sbjct: 466 LKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEV 523


>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
          Length = 531

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD     TPK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H VAL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSVALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++DTG VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG    G +   L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGL---GNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L PT I +++
Sbjct: 269 NKNNLLSPTHIMVEK 283



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 12/255 (4%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S N A +V +  +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTEDDEVFVFGLNYSNCLGTGD-NQSTLTPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGE 148

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYT 347
           V+++G  +   +G G   ++  PR +       +H+ RV   + G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKV----TNCLHIKRVVGIACGQTSSMAVLDTGEVYG 204

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    G LG G+ +++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 408 LGFPDRGVSDKVLRP 422
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV   G VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNVNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPTHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDTGEVYGWGYNGNGQLG-LGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 291
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPTHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 292 YSFG 295
           Y +G
Sbjct: 308 YMWG 311


>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
 gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
 gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_a [Mus musculus]
          Length = 531

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 468 LRGCLEPTEIFIQE 481
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           LT   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           ++++G  +   +G G   ++  PR +         VV ++ G    +A+  SG VY WG 
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 411 PDRGVSDKVLRP 422
              G  + +L P
Sbjct: 267 --TGSKNNLLSP 276



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +G 
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 357 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  VL SG+V+  G N +   G    N     P  V AL G+   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALT 249

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 291
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 292 YSFG 295
           Y +G
Sbjct: 308 YMWG 311


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 121/232 (52%), Gaps = 16/232 (6%)

Query: 233 TIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           T RG + T GS ++ +LG    +   +PTP+ + P   +  +  I+ G  Y  A+T NG 
Sbjct: 540 TSRG-LMTWGSGSYCKLGFKSVEKDSQPTPERL-PNFNISDICSISCGSYYSAALTENGD 597

Query: 291 VYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           VY +G GS        LG+G   D+L P+ +++ +     +V +S G  H  A+ S+G +
Sbjct: 598 VYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQE----IVVISIGFYHSAAVKSNGEL 653

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
            TWG G  G LGHGD  ++ +P+ + S+ SH   QV   ++ T  L   G V+ +G   +
Sbjct: 654 LTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEY 713

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           G LG  D   + K   P ++ SL  +H+ QI+ G  H  V+T+   +  FG+
Sbjct: 714 GQLGLGD---TQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGN 762



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 137/293 (46%), Gaps = 16/293 (5%)

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCK 220
           S   +V +S    H+A V  +G++ T G       GH D  N+PI  P++V+++      
Sbjct: 630 SLQEIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPI--PKVVQSITSHWVT 687

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           QV  G   T  LT  G V T G++ +GQLG GDT    TP  +  L++   ++QIA G +
Sbjct: 688 QVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKY-HIIQIACGAT 746

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           +   +T N  V  FG+G+      G  +    P  + +   K +++ R+S G     AL 
Sbjct: 747 HNAVLTNNREVLVFGNGA----AMGSANIISIPIMVPSL--KIMNIERLSCGHYSTAALT 800

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G VYTWG G    LGHG    +  P+ + +L++    Q+    R    L D+G +Y  
Sbjct: 801 ECGDVYTWGSGQ--ELGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTS 858

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           G   FG LG       D+  RP+ +DSL       IS G  H   + D  R F
Sbjct: 859 GKDPFGQLG---HAAGDQN-RPKKIDSLLKTTFMSISCGENHNAALFDTTRSF 907



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 144/314 (45%), Gaps = 25/314 (7%)

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCG----DNSSFCCGHRDTNRPIFRPRLVEAL 214
           NF + + +  +S    ++A + ++G V+  G     N         T      P+ VE+L
Sbjct: 573 NF-NISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESL 631

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           + +    ++ G   +  +   G + T G    GQLGHGD  ++P PK +  +     V Q
Sbjct: 632 QEIVV--ISIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITS-HWVTQ 688

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           +  G  + + +T NG V+++G+     LG G+      P  + +  +   H+++++ G  
Sbjct: 689 VQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDK--YHIIQIACGAT 746

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H   L ++  V  +G G   A+G  + I  ++P  + SLK     ++      T  L + 
Sbjct: 747 HNAVLTNNREVLVFGNG--AAMGSANII--SIPIMVPSLKIMNIERLSCGHYSTAALTEC 802

Query: 395 GSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
           G VY +G    +G G       G S+    P+++++LR   + QIS G  H   +TD G+
Sbjct: 803 GDVYTWGSGQELGHG------HGTSEA--HPKLVETLRNQSIRQISCGGRHMAFLTDSGK 854

Query: 452 LFGFGDNERAQLGH 465
           ++  G +   QLGH
Sbjct: 855 IYTSGKDPFGQLGH 868



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 22/237 (9%)

Query: 251 HGDTLDRP----------TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
            G+ LD P          TP S  PL  V S     +  S     T  G++ ++GSGS  
Sbjct: 495 QGNGLDSPHHTTSTGGSFTPGSSPPLNAVNSAESSLSMRSATQLDTSRGLM-TWGSGSYC 553

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC-----GA 355
            LG      + QP   +        +  +S G  +  AL  +G VY WG+G         
Sbjct: 554 KLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIAT 613

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG+G   D+ LP+ + SL+  + + +      +  +   G +  +G    G LG  D  V
Sbjct: 614 LGNGTFDDQLLPQKVESLQEIVVISIGFYH--SAAVKSNGELLTWGCGEDGQLGHGD--V 669

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH-DTLRGC 471
            ++ + P+++ S+ +H V+Q+  G  HT+ +T  G++F +G +E  QLG  DT + C
Sbjct: 670 FNQPI-PKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNC 725



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 72/197 (36%), Gaps = 48/197 (24%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  HT+ L  N  VF+ G+S  G LG G     C      +     H++Q++    
Sbjct: 688 QVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSL-DKYHIIQIACGAT 746

Query: 175 HAAFVLQSGQVFTCGDNSS-----------------------FCCGHRDT---------- 201
           H A +  + +V   G+ ++                         CGH  T          
Sbjct: 747 HNAVLTNNREVLVFGNGAAMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVY 806

Query: 202 ------------NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
                             P+LVE L+    +Q++ G     FLT  G ++T G +  GQL
Sbjct: 807 TWGSGQELGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQL 866

Query: 250 GHGDTLDRPTPKSIAPL 266
           GH    D+  PK I  L
Sbjct: 867 GHAAG-DQNRPKKIDSL 882


>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 1
 gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Mus musculus]
          Length = 531

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP ++L  T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           GVVY++G      LG+G  +  + P  + T       V+ V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 468 LRGCLEPTEIFIQE 481
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           LT   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           ++++G  +   +G G   ++  PR +         VV ++ G    +A+  SG VY WG 
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG G+  ++  P  +++L      Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 411 PDRGVSDKVLRP 422
              G  + +L P
Sbjct: 267 --TGSKNNLLSP 276



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +G 
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 357 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  VL SG+V+  G N +   G    N     P  V AL G+   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALT 249

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 291
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 292 YSFG 295
           Y +G
Sbjct: 308 YMWG 311


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 53  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +   ++   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 15/287 (5%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 262 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 378
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 208 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEED 485
           G  HT+V+TD G+++ +G N   QLG         PT +    ME+D
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---TMEKD 308



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 232
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 171/369 (46%), Gaps = 22/369 (5%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G +HTL L SN +V+S G +  G LG+G   TQ  +   +N   A   V +SA  
Sbjct: 157 VAIAAGTHHTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDA---VAISAGA 213

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +  +G V + G N+    G+  T      P  V  L  +  K + AG N +  L 
Sbjct: 214 AHSLALRANGAVVSWGANTYGQLGNGTTTTSA-SPVGVSGLNNI--KSLAAGGNHSLALK 270

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV-TGNGVVY 292
             G V   G N +GQ+G+G T +  +P +++ L     V  ++AG S+  A+ + NGV++
Sbjct: 271 SDGTVTAWGYNAYGQVGNGATANVLSPIAVSTLS---GVTAVSAGVSHSHAIGSSNGVIW 327

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
            +G  +   LG+  + +   P  I      G+    V+ G +H + +   G V+ WG   
Sbjct: 328 GWGLNTYGGLGNNTKVNRSTPGTI--LLTSGLQ--GVAGGAQHTIYVKGDGTVWAWGSNT 383

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G +G G  + +  P  LS+L   +AV   A    +  L   G+V+ +G    G LG  D
Sbjct: 384 YGQIGDGTPLRRLTPVQLSTLTGIIAV--AAGANHSLALAANGTVFAWGRNNHGQLG--D 439

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
              +++ L P  + +L    +  ++ G  H++ +   G ++ +G N   QLG +T    L
Sbjct: 440 GSTTNRSL-PTQVPNLTG--IVALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTDRL 496

Query: 473 EPTEIFIQE 481
            P  +   E
Sbjct: 497 SPVAVHYLE 505



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 169/353 (47%), Gaps = 22/353 (6%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           + + I+ G  H+L L +N +V S G++  G LG+G  TT   S + +      ++  ++A
Sbjct: 205 DAVAISAGAAHSLALRANGAVVSWGANTYGQLGNGTTTT---SASPVGVSGLNNIKSLAA 261

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-G 230
             NH+  +   G V   G N+    G+  T   +  P  V  L GV    V+AG++ +  
Sbjct: 262 GGNHSLALKSDGTVTAWGYNAYGQVGNGATAN-VLSPIAVSTLSGVTA--VSAGVSHSHA 318

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
             +  G +   G NT+G LG+   ++R TP +I  L   G +  +A G  + + V G+G 
Sbjct: 319 IGSSNGVIWGWGLNTYGGLGNNTKVNRSTPGTI--LLTSG-LQGVAGGAQHTIYVKGDGT 375

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+++GS +   +G G     L P  + T       ++ V+AG  H +AL ++G V+ WG+
Sbjct: 376 VWAWGSNTYGQIGDGTPLRRLTPVQLSTLTG----IIAVAAGANHSLALAANGTVFAWGR 431

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG G   +++LP  + +L     V + A    +  L   G+VY +G    G LG 
Sbjct: 432 NNHGQLGDGSTTNRSLPTQVPNLTG--IVALAAGATHSLALRFDGTVYAWGRNHLGQLG- 488

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
            D   +D+ L P  +  L    V  IS G  H++ +   G  F +G +E  QL
Sbjct: 489 -DETCTDR-LSPVAVHYLE--KVVAISAGDNHSLAIHQNGTAFAWGSDEHGQL 537



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 168/359 (46%), Gaps = 25/359 (6%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCV------SFTRINFPSAAHVVQVSASENHAAFV 179
           L S+ +V+S G +    LG+    TQ +      SF  I  P    VV ++A  +H   +
Sbjct: 111 LKSDGTVWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSP-LTDVVAIAAGTHHTLAL 169

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
             +G V++ G NSS   G         +   V+A+       ++AG   +  L   G V 
Sbjct: 170 KSNGTVWSWGLNSS---GQLGNGTLATQSAAVQAVNLTDAVAISAGAAHSLALRANGAVV 226

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G+NT+GQLG+G T    +P  ++ L  + S   +AAG ++ LA+  +G V ++G  + 
Sbjct: 227 SWGANTYGQLGNGTTTTSASPVGVSGLNNIKS---LAAGGNHSLALKSDGTVTAWGYNAY 283

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GYVYTWGKGYCGALGH 358
             +G+G   + L P A+ T       V  VSAG  H  A+ SS G ++ WG    G LG+
Sbjct: 284 GQVGNGATANVLSPIAVSTLSG----VTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGN 339

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
             +++++ P  +  L S L   V    + T  +   G+V+ +G   +G +G    G   +
Sbjct: 340 NTKVNRSTPGTIL-LTSGLQ-GVAGGAQHTIYVKGDGTVWAWGSNTYGQIG---DGTPLR 394

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            L P  L +L    +  ++ G  H++ +   G +F +G N   QLG  +      PT++
Sbjct: 395 RLTPVQLSTLTG--IIAVAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQV 451



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 163/370 (44%), Gaps = 24/370 (6%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G YH+L L S+ +V++ G +  G LG    TT+      +N      V+ ++A +
Sbjct: 49  ISVAAGYYHSLALKSDGTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLTG---VIAIAA-D 104

Query: 174 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV--PCKQV---TAGLN 227
            + +F L+S G V++ G N +   G+          ++ ++  G+  P   V    AG +
Sbjct: 105 YYQSFALKSDGTVWSWGYNGNSALGNASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTH 164

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            T  L   G V + G N+ GQLG+G    +        L +    V I+AG ++ LA+  
Sbjct: 165 HTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDA---VAISAGAAHSLALRA 221

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           NG V S+G+ +   LG+G       P  +        ++  ++AG  H +AL S G V  
Sbjct: 222 NGAVVSWGANTYGQLGNGTTTTSASPVGVSGLN----NIKSLAAGGNHSLALKSDGTVTA 277

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    G +G+G   +   P  +S+L    AV          +    G ++G+G   +G 
Sbjct: 278 WGYNAYGQVGNGATANVLSPIAVSTLSGVTAVSAGVSHSHA-IGSSNGVIWGWGLNTYGG 336

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG      + KV R      L    +  ++ G  HT+ V   G ++ +G N   Q+G  T
Sbjct: 337 LGN-----NTKVNRSTPGTILLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGT 391

Query: 468 LRGCLEPTEI 477
               L P ++
Sbjct: 392 PLRRLTPVQL 401



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 188/437 (43%), Gaps = 30/437 (6%)

Query: 56  LVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVETSAGNQM 115
           L  +A S L  + ++ AG+S +  I   N     W   L     + +++ +  ++ G  +
Sbjct: 295 LSPIAVSTLSGVTAVSAGVSHSHAIGSSNGVIWGWG--LNTYGGLGNNTKVNRSTPGTIL 352

Query: 116 ------QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 168
                  +  G  HT+ +  + +V++ GS+  G +G G   T     T +   +   ++ 
Sbjct: 353 LTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDG---TPLRRLTPVQLSTLTGIIA 409

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           V+A  NH+  +  +G VF  G N+    G    TNR +  P  V  L G+    + AG  
Sbjct: 410 VAAGANHSLALAANGTVFAWGRNNHGQLGDGSTTNRSL--PTQVPNLTGIVA--LAAGAT 465

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  L   G V+  G N  GQLG     DR +P ++  LE+V   V I+AG ++ LA+  
Sbjct: 466 HSLALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAVHYLEKV---VAISAGDNHSLAIHQ 522

Query: 288 NGVVYSFGSGSNFCL-GHGEQHDELQPRAIQTFR-RKGIHVVRVSAGDEHVVALDSSGYV 345
           NG  +++GS  +  L   G       P   Q     KGI    ++AG  H + L+++G  
Sbjct: 523 NGTAFAWGSDEHGQLCDSGSGSGRFSPLISQIPGIVKGI---GIAAGANHTLLLEANGTA 579

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           +  G    G LG G   DK+ P P+++L +  A ++ A    +  L   G+V  +G    
Sbjct: 580 WACGDNLYGQLGDGTTTDKSAPVPITTLTN--AARLAAGGNTSAALTTNGTVSTWGLNSS 637

Query: 406 GSLG---FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
           G LG      R     VLR           V+ +  G  H   V   G +  +G N+  Q
Sbjct: 638 GQLGDNTTASRTTIAPVLRTVYPTVEVFSGVASLGAGTAHLTAVKTDGYVHSWGLNDSGQ 697

Query: 463 LGHDTLRGCLEPTEIFI 479
           +G  TL     PT   +
Sbjct: 698 IGDGTLVNRPLPTAALL 714



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 128/308 (41%), Gaps = 19/308 (6%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   V Q G V+  G N     G+  T      P  V  L GV    V AG   +  L  
Sbjct: 7   HTLAVRQDGTVWASGYNYHGELGN-GTATDSLSPVQVSNLTGV--ISVAAGYYHSLALKS 63

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G NT+G LG   T  R  P  +  L     V+ IAA      A+  +G V+S+
Sbjct: 64  DGTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLT---GVIAIAADYYQSFALKSDGTVWSW 120

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGI-----HVVRVSAGDEHVVALDSSGYVYTWG 349
           G   N  LG+     +  P  +Q     GI      VV ++AG  H +AL S+G V++WG
Sbjct: 121 GYNGNSALGNASPATQKLPAQVQQ-SFGGILSPLTDVVAIAAGTHHTLALKSNGTVWSWG 179

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               G LG+G    ++      +L    AV + A    +  L   G+V  +G   +G LG
Sbjct: 180 LNSSGQLGNGTLATQSAAVQAVNLTD--AVAISAGAAHSLALRANGAVVSWGANTYGQLG 237

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
               G +     P  +  L  +++  ++ G  H++ +   G +  +G N   Q+G+    
Sbjct: 238 ---NGTTTTSASPVGVSGL--NNIKSLAAGGNHSLALKSDGTVTAWGYNAYGQVGNGATA 292

Query: 470 GCLEPTEI 477
             L P  +
Sbjct: 293 NVLSPIAV 300



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 13/196 (6%)

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G  + LAV  +G V++ G   +  LG+G   D L P  +Q     G  V+ V+AG  H +
Sbjct: 4   GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSP--VQVSNLTG--VISVAAGYYHSL 59

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           AL S G V+ WG    G L  GD    T  +P+  L     + + A   ++F L   G+V
Sbjct: 60  ALKSDGTVWAWGLNTYGNL--GDNTTTTRTKPVQVLNLTGVIAIAADYYQSFALKSDGTV 117

Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA-----HHVSQISTGLYHTVVVTDRGRL 452
           + +G+ G  +LG  +   + + L  ++  S          V  I+ G +HT+ +   G +
Sbjct: 118 WSWGYNGNSALG--NASPATQKLPAQVQQSFGGILSPLTDVVAIAAGTHHTLALKSNGTV 175

Query: 453 FGFGDNERAQLGHDTL 468
           + +G N   QLG+ TL
Sbjct: 176 WSWGLNSSGQLGNGTL 191


>gi|357166571|ref|XP_003580754.1| PREDICTED: protein RCC2-like [Brachypodium distachyon]
          Length = 547

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 163/350 (46%), Gaps = 40/350 (11%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L ++   ++ G +  G LGHG +T Q    T ++  S   +++ S  +NH   V   G+ 
Sbjct: 85  LGADGRCYTWGRNEKGQLGHG-DTVQRDLPTIVSELSKYKIIKASIGKNHTVVVTDDGKA 143

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC--KQVTA---GLNFTGFLT-IRGH-V 238
           F+ G N     G       I      E L  VPC   +VTA   G +FT +L+ + G  +
Sbjct: 144 FSFGHNKYGQLGTGSLRNEI------ETLP-VPCLVTEVTAAVCGGDFTVWLSSVEGSSI 196

Query: 239 HTCGSNTHGQLGHG-----DTLD---------RPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
            T G   +GQLGHG     +T D         +P P++IA L E  ++V++A G ++ +A
Sbjct: 197 LTAGLPQYGQLGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEK-TIVKVACGTNHTVA 255

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEHVVALDSS 342
           V  +G VY++G G    LGH EQ DE QPR ++ F++  +      VSAG          
Sbjct: 256 VDSSGFVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKNNVLPPNAIVSAGSASCACTAGG 315

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G +Y WGK        GD  D   P+PL  L S   ++  A      V+    S   +G 
Sbjct: 316 GQLYMWGK----MKNTGD--DWMYPKPLMDL-SGWNIRCMASGNMHHVVGADDSCISWGA 368

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
             +G LG+   G       P+ +DSL   HV+ +  G   ++++ DR ++
Sbjct: 369 AQYGELGYGPNGQKSSA-NPKKVDSLEGMHVTSVGCGYGMSLIIVDRAKI 417



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 131/313 (41%), Gaps = 39/313 (12%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   +   G+ +T G N     GH DT +    P +V  L      + + G N T  +T 
Sbjct: 81  HCVALGADGRCYTWGRNEKGQLGHGDTVQRDL-PTIVSELSKYKIIKASIGKNHTVVVTD 139

Query: 235 RGHVHTCGSNTHGQLGHGDTLDR----PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            G   + G N +GQLG G   +     P P  +    EV + V       ++ +V G+ +
Sbjct: 140 DGKAFSFGHNKYGQLGTGSLRNEIETLPVPCLVT---EVTAAVCGGDFTVWLSSVEGSSI 196

Query: 291 VYSFGSGSNFCLGHGEQHD--------------ELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           + + G      LGHG  ++              + +PRAI     K I  V+V+ G  H 
Sbjct: 197 L-TAGLPQYGQLGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEKTI--VKVACGTNHT 253

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ----VCARKRKTFVLV 392
           VA+DSSG+VYTWG G  G LGH ++ D+  P  +   + +  +     V A         
Sbjct: 254 VAVDSSGFVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKNNVLPPNAIVSAGSASCACTA 313

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
             G +Y +G M         +   D  + P+ L  L   ++  +++G  H VV  D    
Sbjct: 314 GGGQLYMWGKM---------KNTGDDWMYPKPLMDLSGWNIRCMASGNMHHVVGADD-SC 363

Query: 453 FGFGDNERAQLGH 465
             +G  +  +LG+
Sbjct: 364 ISWGAAQYGELGY 376



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE--HVVALDSSGYVYTWGKGYCGALGHG 359
           +G G Q + L P  ++     G+ +  V++G    H VAL + G  YTWG+   G LGHG
Sbjct: 48  VGGGIQGNLLSPSRLRPLV--GVDIRSVASGCTAFHCVALGADGRCYTWGRNEKGQLGHG 105

Query: 360 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           D + + LP  +S L  +  ++    K  T V+ D G  + FG   +G LG
Sbjct: 106 DTVQRDLPTIVSELSKYKIIKASIGKNHTVVVTDDGKAFSFGHNKYGQLG 155



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G  Y +G    G LG  D    D    P I+  L  + + + S G  HTVVVTD G+ F 
Sbjct: 89  GRCYTWGRNEKGQLGHGDTVQRD---LPTIVSELSKYKIIKASIGKNHTVVVTDDGKAFS 145

Query: 455 FGDNERAQLGHDTLRGCLE--PTEIFIQEM 482
           FG N+  QLG  +LR  +E  P    + E+
Sbjct: 146 FGHNKYGQLGTGSLRNEIETLPVPCLVTEV 175


>gi|34098426|sp|Q7ZZC8.1|NEK9_XENLA RecName: Full=Serine/threonine-protein kinase Nek9; Short=xNek9;
           AltName: Full=Nercc1 kinase; AltName: Full=Never in
           mitosis A-related kinase 9; Short=NimA-related protein
           kinase 9
 gi|30523244|gb|AAP31900.1| NIMA-family kinase Nercc1 [Xenopus laevis]
          Length = 944

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++  KG    +QV AG      +T+   ++T      GS  HGQLGHGD      PK
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 319
            +  L+   SV +++ G  + + +T  G +YSFGS    CLG  +    + L+P  +  F
Sbjct: 401 HVEKLQG-KSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFF 459

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
             + +   +VS GD H++AL  S  VY+WG G  G LG   E D   P+ +   +    V
Sbjct: 460 LNEPVD--QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIV 517

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 429
            VC     +F+L  TG V   G      LG        ++ +  +         +   L 
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 367
           P+ +  F+  G    +V AGD H   +     +YTW     G    G LGHGD      P
Sbjct: 341 PQKLDVFK-GGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
           + +  L+     +V      T  + D G +Y FG   +G LG  ++    +VL P ++D 
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGV-NQSAGSEVLEPLLVDF 458

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
                V Q+S G  H + +T    ++ +G  E  +LG D+      P ++ +Q
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 134/314 (42%), Gaps = 35/314 (11%)

Query: 107 VETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSA 163
           VE   G  +Q ++ G   T+ I++   ++S GS   G LG +    ++ +    ++F   
Sbjct: 402 VEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLN 461

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVP 218
             V QVS  ++H   + +S  V++ G      CG       D+   ++ P+ VE  +G+ 
Sbjct: 462 EPVDQVSCGDSHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLC 515

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEE 268
              V  G + +  LT+ G V  CG N H +LG          H    + P   S+   ++
Sbjct: 516 IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQ 575

Query: 269 VG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
           +    +  I+ G ++  A+   G + +FGS     LG G+    L    +      G  V
Sbjct: 576 LSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQV 634

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAV 379
           +RVS GDE   A  +  +++ WG G  G L         G +I  + P P+     H+  
Sbjct: 635 IRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTD 694

Query: 380 QVCARKRKTFVLVD 393
             C R   T ++V+
Sbjct: 695 LSC-RGWHTILIVE 707


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 58  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASL 108

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +   ++   L      +V  G   
Sbjct: 109 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYH 168

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 169 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 228

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 229 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 287 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 12/283 (4%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 262 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 96  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 152

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 378
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 153 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 212

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 213 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 269

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           G  HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 270 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 232
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 119

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 120 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 179

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 180 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 238

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 239 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 137/290 (47%), Gaps = 37/290 (12%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG------HGDTLDR- 257
           + RP+ V    G P  QV  G     +LT  G V++ G N   ++       H  TL   
Sbjct: 465 VLRPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDN 524

Query: 258 ------PTPKSIAP--LEEVG--------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
                  T   +AP  +EE+         ++  +A G  + LA+T  G +Y++GSG +  
Sbjct: 525 ESTRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGR 584

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LGHG+  D   PR + +  R+   VV  S G  H   L + G V+T+G+G  G LG GD 
Sbjct: 585 LGHGDMRDRAVPRKVMSLLRES--VVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDN 642

Query: 362 IDKTLPEPLSSLK--SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS--LGFPDRGVSD 417
             +  P P+      + +++ VC     T  L   GSV+ +G  G G   LG+ DR   D
Sbjct: 643 KWRDTPHPIVGFPQGTSISLVVCGWN-FTAALDRQGSVFTWGKTGEGQCGLGYVDR---D 698

Query: 418 KVLRPRILDSLR---AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +V+ PR +D LR      V  ++ G  HTVV+T  G L+ +G  E  QLG
Sbjct: 699 QVV-PRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLG 747



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 177/423 (41%), Gaps = 59/423 (13%)

Query: 99  SVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPE----TTQCVS 154
           SVE + D+VE   G+               +++     SS   V G  P     T   + 
Sbjct: 423 SVEDAVDVVELEEGD---------------DATQVEEPSSCMYVWGRPPSLEGGTPLVLR 467

Query: 155 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN-----SSFCCGHRDTNRP----- 204
              ++  +   +VQV+    H  ++  +G V++ GDN     ++       +  P     
Sbjct: 468 PKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNEST 527

Query: 205 -------IFRPRLVE------ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
                     P LVE      AL       V  G   +  +T  G ++T GS   G+LGH
Sbjct: 528 RVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGH 587

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 311
           GD  DR  P+ +  L    SVV  + G ++   +T  G V++FG G N  LG G+     
Sbjct: 588 GDMRDRAVPRKVMSLLR-ESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRD 646

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK---GYCGALGHGDEIDKTLPE 368
            P  I  F  +G  +  V  G     ALD  G V+TWGK   G CG LG+ D  D+ +P 
Sbjct: 647 TPHPIVGF-PQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCG-LGYVDR-DQVVPR 703

Query: 369 PLSSLKS---HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPR 423
            +  L+       V V      T VL  +G +Y +G   +G LG  D  + +  +V  P 
Sbjct: 704 CVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGDVYQPLPARVQLP- 762

Query: 424 ILDSLRA-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ--LGHDTLRGCLEPTEIFIQ 480
             D+L A   ++++  G +H++  T++  +F +G N      LGH   +   E  + F  
Sbjct: 763 -ADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDCFSS 821

Query: 481 EME 483
           + E
Sbjct: 822 QTE 824



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 18/298 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  V+    H+  +  +G+++T G       GH D  R    PR V +L        + G
Sbjct: 555 IAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDM-RDRAVPRKVMSLLRESVVSASCG 613

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              T  LT +G V T G   +G+LG GD   R TP  I    +  S+  +  G ++  A+
Sbjct: 614 GAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAAL 673

Query: 286 TGNGVVYSFG-SGSNFC-LGHGEQHDELQPRAIQTFRR-KGIHVVRVSAGDEHVVALDSS 342
              G V+++G +G   C LG+ ++ D++ PR +   R   G  VV V+ G  H V L +S
Sbjct: 674 DRQGSVFTWGKTGEGQCGLGYVDR-DQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTAS 732

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV-------LVDTG 395
           G +Y+WG G  G LG GD     + +PL +     A  +CA  +   V       +  T 
Sbjct: 733 GELYSWGLGEYGQLGTGD-----VYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTE 787

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
               F W G  S G    G +    +P  +D   +     ++ G  +T+ +     L+
Sbjct: 788 QRVMFAW-GLNSYGACGLGHTANKDKPERIDCFSSQTELVVACGHKYTIALEVNASLY 844



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 10/235 (4%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +  +L +  SVF+ G    G LG G    +      + FP    +  V    N  A +
Sbjct: 614 GAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAAL 673

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP---CKQVTAGLNFTGFLTIRG 236
            + G VFT G      CG    +R    PR V+ L+ V       V  G   T  LT  G
Sbjct: 674 DRQGSVFTWGKTGEGQCGLGYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASG 733

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIA-PLEEVGSVVQIA---AGPSYMLAVTGNGVVY 292
            +++ G   +GQLG GD   +P P  +  P + + +  Q+A    G  + +A T   V++
Sbjct: 734 ELYSWGLGEYGQLGTGDVY-QPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMF 792

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           ++G  S    G G   ++ +P  I  F  +   V  V+ G ++ +AL+ +  +YT
Sbjct: 793 AWGLNSYGACGLGHTANKDKPERIDCFSSQTELV--VACGHKYTIALEVNASLYT 845


>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 821

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 160/361 (44%), Gaps = 22/361 (6%)

Query: 118 TTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 176
           + G+Y T  + ++ S++  G +  G LG G    +      +     +    +S    H 
Sbjct: 479 SAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAP---VQVGGDSDWTSLSVGREHT 535

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
             V   G ++  G N +   G  DT+      R+           V+AG  +T  +   G
Sbjct: 536 LAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGSDSD---WATVSAGTGYTLAVKDDG 592

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            +   G N+HGQLG GDT +R  P  +A   +  +V   +AG  + LAV  +G ++++G 
Sbjct: 593 TLWAWGRNSHGQLGLGDTNNRDAPVQVASDNDWAAV---SAGSRHTLAVKNDGTLWAWGR 649

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
            S+  LG G+  +   P  + +          VS G  H +A+ + G ++ WG+   G L
Sbjct: 650 NSDGQLGLGDTDNRDVPEQVGSD----TDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQL 705

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           G GD  ++  PE +       AV   A  + T  + + G+++G+G   +G LG  D   +
Sbjct: 706 GLGDTDERHAPEQVGGDSDWAAV--TAGWQHTLAIKNDGTLWGWGLNLYGQLGLGD---T 760

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
           D    P  + S      + ++ G YHT+ V D G L  +G N   QLG  T R   +P E
Sbjct: 761 DGRHAPMQVGS--DSDWATVAAGRYHTLAVKDDGTLRAWGRNRFGQLGQRTYR-FDQPQE 817

Query: 477 I 477
           +
Sbjct: 818 V 818



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 167/367 (45%), Gaps = 31/367 (8%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPE---TTQCVSFTRINFPSAAHVVQVSAS 172
           +T G YHTL + ++ ++ + G +  G LG G     T+   + T  ++ +A      SA 
Sbjct: 428 VTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYITSPLQTVTEADWAAA------SAG 481

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           +     V   G ++  G N S   G  DT+    R   V+         ++ G   T  +
Sbjct: 482 QYQTQAVKADGSLWGWGRNHSGQLGLGDTDD---RHAPVQVGGDSDWTSLSVGREHTLAV 538

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G +   G N +GQLG GDT DR TP+ +    +  +V   +AG  Y LAV  +G ++
Sbjct: 539 KADGTLWGWGQNYNGQLGLGDTDDRKTPERVGSDSDWATV---SAGTGYTLAVKDDGTLW 595

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  S+  LG G+ ++   P  + +          VSAG  H +A+ + G ++ WG+  
Sbjct: 596 AWGRNSHGQLGLGDTNNRDAPVQVASDN----DWAAVSAGSRHTLAVKNDGTLWAWGRNS 651

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG GD  ++ +PE + S     AV   +    T  +   G+++ +G    G LG  D
Sbjct: 652 DGQLGLGDTDNRDVPEQVGSDTDWAAVSTGS--GHTLAVKTDGTLWAWGRNSDGQLGLGD 709

Query: 413 RGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
              +D+   P  +  DS  A     ++ G  HT+ + + G L+G+G N   QLG     G
Sbjct: 710 ---TDERHAPEQVGGDSDWA----AVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTDG 762

Query: 471 CLEPTEI 477
              P ++
Sbjct: 763 RHAPMQV 769



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 106/233 (45%), Gaps = 14/233 (6%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +   G +   G N  GQLG GDT  R TP  +    +  +V   +AG +Y LAV  +G +
Sbjct: 138 MKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGSDTDWAAV---SAGGAYTLAVKDDGTL 194

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G      LG G+  D   P  + +        V VSAG  H +AL + G ++ WG+ 
Sbjct: 195 WAWGENYFGQLGLGDTDDRHAPEQVGSDS----DWVAVSAGRHHTLALKADGTLWAWGRN 250

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
           Y G LG G   ++  PE + S        V    R +  + + G+++ +G    G LG  
Sbjct: 251 YFGQLGLGGTTNRNAPEQVGSHSDWAG--VIGGDRHSLAVREDGTLWSWGQNNVGQLGL- 307

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                D V R R          + +S GL HT+ V + G L+ +G N   QLG
Sbjct: 308 ----GDTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDGTLWAWGGNGFGQLG 356



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 135/301 (44%), Gaps = 22/301 (7%)

Query: 113 NQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           +   ++ GR HTL + ++ +++  G +  G LG G +T    +  R+   S +    VSA
Sbjct: 524 DWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLG-DTDDRKTPERVG--SDSDWATVSA 580

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              +   V   G ++  G NS    G  DTN    R   V+         V+AG   T  
Sbjct: 581 GTGYTLAVKDDGTLWAWGRNSHGQLGLGDTNN---RDAPVQVASDNDWAAVSAGSRHTLA 637

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA---GPSYMLAVTGN 288
           +   G +   G N+ GQLG GDT +R  P      E+VGS    AA   G  + LAV  +
Sbjct: 638 VKNDGTLWAWGRNSDGQLGLGDTDNRDVP------EQVGSDTDWAAVSTGSGHTLAVKTD 691

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G ++++G  S+  LG G+  +   P  +            V+AG +H +A+ + G ++ W
Sbjct: 692 GTLWAWGRNSDGQLGLGDTDERHAPEQVGGDS----DWAAVTAGWQHTLAIKNDGTLWGW 747

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G    G LG GD   +  P  + S  S  A  V A +  T  + D G++  +G   FG L
Sbjct: 748 GLNLYGQLGLGDTDGRHAPMQVGS-DSDWAT-VAAGRYHTLAVKDDGTLRAWGRNRFGQL 805

Query: 409 G 409
           G
Sbjct: 806 G 806



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 149/351 (42%), Gaps = 25/351 (7%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  HTL + N  ++++ G +  G LG G    +      +   S      ++A + +
Sbjct: 328 VSAGLLHTLAVKNDGTLWAWGGNGFGQLGLGDTDNRDAP---VQVGSDNDWAALNAGQRY 384

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           +  V   G +++ G N     G  DT+    R    +   G+    VTAG+  T  +   
Sbjct: 385 SLAVKNDGSLWSWGWNDFGELGLGDTDD---RHAPEQVGGGMEWAAVTAGMYHTLGVKAD 441

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYS 293
           G +   G N  G+LG G  +        +PL+ V        +AG     AV  +G ++ 
Sbjct: 442 GTLRAWGRNDFGELGLGVMV-----YITSPLQTVTEADWAAASAGQYQTQAVKADGSLWG 496

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G   +  LG G+  D   P  +            +S G EH +A+ + G ++ WG+ Y 
Sbjct: 497 WGRNHSGQLGLGDTDDRHAPVQVGGDS----DWTSLSVGREHTLAVKADGTLWGWGQNYN 552

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG GD  D+  PE + S  S  A  V A    T  + D G+++ +G    G LG  D 
Sbjct: 553 GQLGLGDTDDRKTPERVGS-DSDWAT-VSAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDT 610

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              D  ++    +   A     +S G  HT+ V + G L+ +G N   QLG
Sbjct: 611 NNRDAPVQVASDNDWAA-----VSAGSRHTLAVKNDGTLWAWGRNSDGQLG 656



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 23/293 (7%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   +   G ++  G N+    G  DT +   R    +         V+AG  +T  +  
Sbjct: 134 HTLAMKADGTLWAWGQNNVGQLGLGDTEK---RDTPAQVGSDTDWAAVSAGGAYTLAVKD 190

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYMLAVTGNGVV 291
            G +   G N  GQLG GDT DR  P      E+VGS    V ++AG  + LA+  +G +
Sbjct: 191 DGTLWAWGENYFGQLGLGDTDDRHAP------EQVGSDSDWVAVSAGRHHTLALKADGTL 244

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G      LG G   +   P  + +          V  GD H +A+   G +++WG+ 
Sbjct: 245 WAWGRNYFGQLGLGGTTNRNAPEQVGSHS----DWAGVIGGDRHSLAVREDGTLWSWGQN 300

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG GD +++  PE + +  S  A  V A    T  + + G+++ +G  GFG LG  
Sbjct: 301 NVGQLGLGDTVERRRPEQVGN-DSDWAT-VSAGLLHTLAVKNDGTLWAWGGNGFGQLGLG 358

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           D   +D    P  + S   +  + ++ G  +++ V + G L+ +G N+  +LG
Sbjct: 359 D---TDNRDAPVQVGS--DNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELG 406



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 7/136 (5%)

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 388
           ++AG  H +A+ + G ++ WG+   G LG GD   +  P  + S     A  V A    T
Sbjct: 128 LAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGSDTDWAA--VSAGGAYT 185

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
             + D G+++ +G   FG LG  D   +D    P  + S  +  V+ +S G +HT+ +  
Sbjct: 186 LAVKDDGTLWAWGENYFGQLGLGD---TDDRHAPEQVGS-DSDWVA-VSAGRHHTLALKA 240

Query: 449 RGRLFGFGDNERAQLG 464
            G L+ +G N   QLG
Sbjct: 241 DGTLWAWGRNYFGQLG 256


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 53  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +   ++   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 12/283 (4%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 262 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 378
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 208 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           G  HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 232
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 53  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +   ++   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 12/283 (4%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 262 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
            +  L  +++ S+    +GP  +LA T  G V+++G  +   LG+G  +  L P  I T 
Sbjct: 91  RLDSLSGKKIASL-SYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCQIST- 147

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 378
                 V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + 
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVV 207

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
           V +   +     +VDTG VY +G+ G G LG    G      R   L  +R   V +++ 
Sbjct: 208 VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
           G  HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 3/237 (1%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 232
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 139/336 (41%), Gaps = 61/336 (18%)

Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
           +V+TCG NS    GH DT        LV+  +G     V AG   T  L   G V+T G 
Sbjct: 232 EVWTCGQNSYGELGHSDTGTRKTHC-LVKPFEGREVVDVAAGNEHTVLLCSTGEVYTAGY 290

Query: 244 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGVVYSFGSGSNFC 301
           N +GQ G G T  R    +  P++     VQ+ A  G  + L V  +G + SFG      
Sbjct: 291 NDNGQCGQG-TTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQ 349

Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           LG G    E  P+ ++     GI V + S    H V    +G VYT+G+   G LG GD 
Sbjct: 350 LGQGNTSSEPVPKPVRGL--NGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDV 407

Query: 362 IDKTLPEPLSSLKSH------------------LAVQVCAR-------------KRK--- 387
           ID+ LP  + SL+                    + VQ C +             +RK   
Sbjct: 408 IDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTESQRKFVA 467

Query: 388 -------------------TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
                              T VL     V+GFG   +G LG      + +V  P I++  
Sbjct: 468 VKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGH--TTQRVFGPTIIEGA 525

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +  HV +IS G YHTV++   G LF FG N   QLG
Sbjct: 526 QEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLG 561



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 170/384 (44%), Gaps = 32/384 (8%)

Query: 20  EILTSGRLSAVDLAHLELTSKTFGGSHGLY-PQKFRSLVDLAASQ-----LCALHSIY-A 72
           E+ T G+ S  +L H +  ++    +H L  P + R +VD+AA       LC+   +Y A
Sbjct: 232 EVWTCGQNSYGELGHSDTGTRK---THCLVKPFEGREVVDVAAGNEHTVLLCSTGEVYTA 288

Query: 73  GMSRNVQIELLNRCNGNWKRVLRFLQ-SVEHSSDIVETSAGNQMQITTGRYHTLLI-SNS 130
           G + N Q        G  +RV    +  ++     V+  A N      G  HTL++  + 
Sbjct: 289 GYNDNGQC-----GQGTTQRVGVLTRVPIDGGRKAVQVHAYN------GCEHTLVVLDDG 337

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
            + S G +  G LG G  +++ V    +   +   V Q S S  H+     +G+V+T G 
Sbjct: 338 QMMSFGYNYRGQLGQGNTSSEPVP-KPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGR 396

Query: 191 NSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
           N     G  D  +R +  P LVE+L+G     +  G   T   T+   V +CG N +GQL
Sbjct: 397 NDFGQLGSGDVIDRKL--PCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQL 454

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQ 307
           G   T  +    ++    +   V  +  G  + + +T    V+ FG        LGH  Q
Sbjct: 455 GLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQ 514

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
                P  I+  + K  HV R+SAG  H V +D+ G ++ +G+ + G LG GD  ++  P
Sbjct: 515 R-VFGPTIIEGAQEK--HVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSP 571

Query: 368 EPLSSLKSHLAVQVCARKRKTFVL 391
            P+S+       +V A    T VL
Sbjct: 572 FPVSTFLGKRIAKVAAGFYHTIVL 595



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 148/348 (42%), Gaps = 21/348 (6%)

Query: 105 DIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVS-FTRINFPSA 163
           ++V+ +AGN+  +       LL S   V++ G +  G  G G  TTQ V   TR+     
Sbjct: 265 EVVDVAAGNEHTV-------LLCSTGEVYTAGYNDNGQCGQG--TTQRVGVLTRVPIDGG 315

Query: 164 AHVVQVSASE--NHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCK 220
              VQV A     H   VL  GQ+ + G N     G  +T+  P+  P+ V  L G+   
Sbjct: 316 RKAVQVHAYNGCEHTLVVLDDGQMMSFGYNYRGQLGQGNTSSEPV--PKPVRGLNGIRVT 373

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           Q +     +      G V+T G N  GQLG GD +DR  P  +  L     +  +A G  
Sbjct: 374 QASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRG-QRITTLACGQY 432

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           + +  T    V S G      LG      + +  A++  +  G  V  V  G  H + L 
Sbjct: 433 HTVVSTLEIGVQSCGKNDYGQLGLESTESQRKFVAVKG-KLDGAQVRHVRCGYYHTIVLT 491

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
           +  +V+ +G+   G LG G    +   P  +   +     ++ A    T ++   G ++ 
Sbjct: 492 AEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFV 551

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           FG    G LG  D   +++   P  + +     +++++ G YHT+V+T
Sbjct: 552 FGRNHHGQLGTGD---TNERHSPFPVSTFLGKRIAKVAAGFYHTIVLT 596


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 122/237 (51%), Gaps = 17/237 (7%)

Query: 229 TGFLTIRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
           T   T RG + T GS+++ +LG    G    + TP+ + P   +  +  I+ G  Y  A+
Sbjct: 582 TQLDTQRG-IMTWGSSSNCKLGFKTEGREQSQATPERL-PNFNIPEICSISCGSYYSAAL 639

Query: 286 TGNGVVYSFGSGSN-----FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           T NG VY +G GS        LG+G   D+L P  +++       VV VS G  H  AL 
Sbjct: 640 TENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLS----EVVLVSIGYYHSAALK 695

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           S+G + TWG G  G LGHGD +++T+P+ + ++ SH   QV   ++ T  L   G V+ +
Sbjct: 696 SNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTW 755

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           G   +G LG    G + K   P ++ SL  +++ QI+ G  H  V+T+   +  FG+
Sbjct: 756 GTSEYGQLGL---GDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGN 809



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 158/355 (44%), Gaps = 24/355 (6%)

Query: 119 TGRYHTLLISNSSVFSCGSSLCGVLG---HGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           + R  T L +   + + GSS    LG    G E +Q       NF +   +  +S    +
Sbjct: 577 SSRSATQLDTQRGIMTWGSSSNCKLGFKTEGREQSQATPERLPNF-NIPEICSISCGSYY 635

Query: 176 AAFVLQSGQVFTCG----DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           +A + ++G V+  G     N         +      P  VE+L  V    V+ G   +  
Sbjct: 636 SAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVL--VSIGYYHSAA 693

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           L   G + T G    GQLGHGD L++  PK +  +     V Q+  G  + + +T NG V
Sbjct: 694 LKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTS-HWVTQVQCGEKHTICLTKNGKV 752

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G+     LG G+      P  + +  +   ++++++ G  H   L ++  V  +G G
Sbjct: 753 FTWGTSEYGQLGLGDTQKNCTPMLVTSLEK--YNIIQIACGSTHCAVLTNAREVLVFGNG 810

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              A+G  + I  ++P  + +LK HL ++ +      T  L + G VY   W     LG 
Sbjct: 811 --AAMGSANII--SVPMMVPALK-HLNIERLSCGHYSTAALTECGDVYT--WGSGQELG- 862

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
              G +   L P+++D LR+  + QIS G  H   +TD G+++  G +   QLGH
Sbjct: 863 --HGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGH 915



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 13/225 (5%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  HT+ L  N  VF+ G+S  G LG G     C      +     +++Q++    
Sbjct: 735 QVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSL-EKYNIIQIACGST 793

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H A +  + +V   G+ ++    +      I  P +V ALK +  ++++ G   T  LT 
Sbjct: 794 HCAVLTNAREVLVFGNGAAMGSANI-----ISVPMMVPALKHLNIERLSCGHYSTAALTE 848

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V+T GS    +LGHG       PK +  L    S+ QI+ G  +M  +T +G +Y+ 
Sbjct: 849 CGDVYTWGSGQ--ELGHGTNQSELHPKLVDGLRS-QSIRQISCGGRHMAFLTDSGKIYTC 905

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           G      LGH  Q D+ +P+ I +  +     + VS G+ H  +L
Sbjct: 906 GKDPFGQLGHA-QGDQNKPKKIDSLLKTTF--ISVSCGENHNASL 947


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 103/210 (49%), Gaps = 9/210 (4%)

Query: 156 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK 215
           TR++F     +V V+     +A +    +VFT G  S    GH + +   + PR V AL 
Sbjct: 257 TRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDE-WLPRSVAALH 315

Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--------APLE 267
            +P  QV  G      L++ G V+T G   HGQLGHGD     TPK +          + 
Sbjct: 316 HIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVA 375

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
           +VGS V +A G S  L +T  G + SFG      LG GE+    +P  I +        V
Sbjct: 376 DVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFV 435

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
            +SAGDEH  A+ S G VYTWG+G  GA+G
Sbjct: 436 HLSAGDEHCAAVTSKGNVYTWGQGCFGAVG 465



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 7/228 (3%)

Query: 263 IAPLEEVGSVVQIAAGPSYM-LAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTF 319
           +A L       ++ +GPS + L    +  +Y F  G   N+ LG G+   +  P+ + T 
Sbjct: 149 VAALRHEDPRARVVSGPSALSLQPRRDEAIYLFAWGCSHNYQLGTGQYQAQPFPKLVSTL 208

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
            R G  ++ VS G +H  A+DS+G ++TWG    G LG     D   P  +  LK  + V
Sbjct: 209 TRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDFLKDEVIV 268

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            V      +  +     V+ +G    G LG  ++  SD+ L PR + +L    + Q++ G
Sbjct: 269 DVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEK--SDEWL-PRSVAALHHIPIVQVALG 325

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTG 487
             H   ++  G ++ +G+ E  QLGH  L  C  P ++ + E+E  TG
Sbjct: 326 YEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLL-ELENTTG 372



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 137/309 (44%), Gaps = 22/309 (7%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH----RDTNRPIFRPRLVEALKGVPCKQ 221
           ++ VS   +H A +  +G++FT G      C H      + + +  P  V+ LK      
Sbjct: 215 IIDVSYGADHGAAIDSTGKLFTWG-----LCDHGRLGLKSGKDVPYPTRVDFLKDEVIVD 269

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           VT G+  +  ++    V T GS + GQLGH +  D   P+S+A L  +  +VQ+A G  +
Sbjct: 270 VTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVAALHHI-PIVQVALGYEH 328

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-------HVVRVSAGDE 334
           M A++ +G VY++G G +  LGHG+ +    P+ +                 V ++ G  
Sbjct: 329 MAALSLDGDVYTWGEGEHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGAS 388

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLV 392
             + L   G + ++G    GALG G++     P  ++S  +     V + A       + 
Sbjct: 389 VTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVT 448

Query: 393 DTGSVYGFGWMGFGSLGFPDRGV---SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
             G+VY +G   FG++G P R          +P  L+          S G  +TV+++  
Sbjct: 449 SKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSKD 508

Query: 450 GRLFGFGDN 458
           G +   GD+
Sbjct: 509 GCVLVLGDD 517



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 118/281 (41%), Gaps = 55/281 (19%)

Query: 208 PRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
           P+LV  L   G     V+ G +    +   G + T G   HG+LG     D P P  +  
Sbjct: 202 PKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDHGRLGLKSGKDVPYPTRVDF 261

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
           L++   +V +  G      ++ +  V+++GSGS   LGH E+ DE  PR++       I 
Sbjct: 262 LKDE-VIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVAALHH--IP 318

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           +V+V+ G EH+ AL   G VYTWG+G  G LGHGD                  +  C+  
Sbjct: 319 IVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGD------------------LNSCSTP 360

Query: 386 RKTFVLVD--TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
           +K  + ++  TG V   G                    P +L           + G   T
Sbjct: 361 KKLLLELENTTGEVADVG-------------------SPVLL-----------ACGASVT 390

Query: 444 VVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
           +++TD GRL  FG +E   LG    R    P  I  + M++
Sbjct: 391 LILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDK 431


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 161/366 (43%), Gaps = 25/366 (6%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L L ++   ++ G +  G LG   + T     T    P  AHVV ++A  
Sbjct: 640 VALAAGDSHSLALRADGVAWAWGGNDQGQLG---DATTLERSTPAAVPGLAHVVALAAGN 696

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +   G   + G+N     G          P  V+       K V AG + +  + 
Sbjct: 697 AHSLVLHADGTSSSWGNN---AYGQLGDGTSTLHPVPVQVPGPSAMKGVAAGGSHSLAVR 753

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G+N  G+LG G  L RP P  +   + +GS V ++AG ++ LAV  +G V++
Sbjct: 754 SDGTVWAWGNNGSGELGDGTGLQRPRPVQV---QGLGSAVAVSAGTNHSLAVQSDGTVWA 810

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +G  S   LG G       P      R  G++ V+ VSAG  H +AL S G V+ WG  +
Sbjct: 811 WGGNSQGQLGDGTGITRYVP-----VRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNF 865

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG      + +P  +  L     V + A    +  +   G+V+ +G+  +G LG   
Sbjct: 866 YGQLGDATSTQRLVPIQVPGLTG--VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGD-- 921

Query: 413 RGVSDKVLR-PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
                K+ R P +     A  VS ++ G YH++ V   G ++ +G N   QLG  T    
Sbjct: 922 ---GTKIQRSPPVQVPGLAGMVS-VAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQR 977

Query: 472 LEPTEI 477
           L P  I
Sbjct: 978 LLPVPI 983



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 169/365 (46%), Gaps = 23/365 (6%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + ++ G  H+L ++S+  V + G +  G LG G  T +   +T +   S   V  V A  
Sbjct: 190 VALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTER---WTPVLVSSLTGVKSVVAGT 246

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  +   G V   G+N S   G    T RP+  P +V  L  V  + + AG   +  L
Sbjct: 247 FHSLALCSDGTVRAWGENGSGQLGISSTTRRPV--PVVVPGLTNV--QALAAGSAHSLAL 302

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   G+N HGQ+G+G    + TP  +     VG +  IAAG ++ LA+  +G+ +
Sbjct: 303 RSDGTVRAWGNNDHGQVGNGTISQQLTPVQV---PGVGRMKSIAAGGAHSLAMRADGITW 359

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  S   LG G+   +L+P  +   R +    + +  G+ H +AL + G V+ WG   
Sbjct: 360 AWGDDSQGQLGDGQSSQQLRPARVLGQRIR----MPLGTGNRHSLALHADGTVWAWGVNT 415

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G ++ +TLP  +  L       + A    +      G+V+ +G   FG LG   
Sbjct: 416 AGQLGDGTDLPRTLPVQVPGLAG--VHTLSATTSHSLAARADGTVWAWGDNAFGQLG--- 470

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            G + + L P  +  L    V  +S+   H++ V+  G ++ +G N   +LG  T    L
Sbjct: 471 DGTTTQRLLPVQVPGLAG--VDTVSSMHQHSLAVSRDGTVWAWGFNGSGRLGDGTTLSRL 528

Query: 473 EPTEI 477
            P ++
Sbjct: 529 TPVQV 533



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 158/362 (43%), Gaps = 22/362 (6%)

Query: 117  ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            +  G  H+L + S+ +V++ G++  G LG G   T       +        V VSA  NH
Sbjct: 742  VAAGGSHSLAVRSDGTVWAWGNNGSGELGDG---TGLQRPRPVQVQGLGSAVAVSAGTNH 798

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            +  V   G V+  G NS    G   T    + P  V  L GV    V+AG   +  L   
Sbjct: 799  SLAVQSDGTVWAWGGNSQGQLGD-GTGITRYVPVRVSGLNGV--MAVSAGSAHSLALRSD 855

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G V   G N +GQLG   +  R  P  +  L     VV IAAG  + LAV  +G V+++G
Sbjct: 856  GTVWAWGYNFYGQLGDATSTQRLVPIQVPGLT---GVVSIAAGTHHSLAVRSDGTVWAWG 912

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                  LG G +     P  +Q     G+  V V+AG  H +A+ S+G V+ WG    G 
Sbjct: 913  YNFYGQLGDGTKIQRSPP--VQVPGLAGM--VSVAAGTYHSLAVHSNGTVWAWGYNNHGQ 968

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            LG G    + LP P+SS    +A    A    + V+   G+V+G+G      LG  D   
Sbjct: 969  LGDGTTTQRLLPVPISSSSGVIA---AAANWHSLVVRTDGTVWGWGSNNASQLG--DGST 1023

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
            SD   R     S   + V  IS+G  H++ +   G ++ +G     QLG   +   L P 
Sbjct: 1024 SD---RKMPTPSSVPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPA 1080

Query: 476  EI 477
             +
Sbjct: 1081 GV 1082



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 158/358 (44%), Gaps = 28/358 (7%)

Query: 128 SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFT 187
           ++ +V++ G +  G LG G  T + +    +  P  A V  VS+   H+  V + G V+ 
Sbjct: 454 ADGTVWAWGDNAFGQLGDGTTTQRLLP---VQVPGLAGVDTVSSMHQHSLAVSRDGTVWA 510

Query: 188 CGDNSSFCCGHRDT-NR--PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
            G N S   G   T +R  P+  P L   +       V AG   +  L   G V   G N
Sbjct: 511 WGFNGSGRLGDGTTLSRLTPVQVPGLSSMVA------VAAGSTHSLALRADGTVWAWGDN 564

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
           ++G LG G TL R +P  +  L     VV +AAG  Y LAV   G V+++G      LG 
Sbjct: 565 SNGALGDGTTLRRLSPVQVPGLS---GVVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGD 621

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G       PR   T       VV ++AGD H +AL + G  + WG    G LG    +++
Sbjct: 622 GTT----TPRVTPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLER 677

Query: 365 TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
           + P  +  L +H+ V + A    + VL   G+   +G   +G LG    G S   L P  
Sbjct: 678 STPAAVPGL-AHV-VALAAGNAHSLVLHADGTSSSWGNNAYGQLG---DGTS--TLHPVP 730

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 482
           +       +  ++ G  H++ V   G ++ +G+N   +LG  T  G   P  + +Q +
Sbjct: 731 VQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGT--GLQRPRPVQVQGL 786



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 139/313 (44%), Gaps = 23/313 (7%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           QV+A   H+  +   G V+  GDN+    G   T      P  V++L  V    V   + 
Sbjct: 41  QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGD-GTGITQRLPVRVQSLDSV----VALAVG 95

Query: 228 FTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
           +   L +R  G V   G N  GQLG G       P  +  L     VV IAAG  + LA+
Sbjct: 96  YQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSLN---GVVAIAAGDHHSLAL 152

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGY 344
             +G V+++G  +     HG+  D+    +    + +G+  VV +SAG  H +A+ S G 
Sbjct: 153 LSDGSVWAWGYNA-----HGQLGDDTTVASPLPVQVQGLSGVVALSAGSTHSLAVLSDGK 207

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           V  WG  Y G LG G   ++  P  +SSL       V A    +  L   G+V  +G  G
Sbjct: 208 VKAWGDNYYGQLGDGSSTERWTPVLVSSLTG--VKSVVAGTFHSLALCSDGTVRAWGENG 265

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G L     G+S    RP  +      +V  ++ G  H++ +   G +  +G+N+  Q+G
Sbjct: 266 SGQL-----GISSTTRRPVPVVVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVG 320

Query: 465 HDTLRGCLEPTEI 477
           + T+   L P ++
Sbjct: 321 NGTISQQLTPVQV 333



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 147/363 (40%), Gaps = 33/363 (9%)

Query: 112 GNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQC----VSFTRINFPSAAHV 166
           G    I  G  H+L + ++   ++ G    G LG G  + Q     V   RI  P     
Sbjct: 337 GRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMP----- 391

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
             +     H+  +   G V+  G N++   G   T+ P   P  V  L GV     T   
Sbjct: 392 --LGTGNRHSLALHADGTVWAWGVNTAGQLGD-GTDLPRTLPVQVPGLAGVHTLSATTSH 448

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           +        G V   G N  GQLG G T  R  P  +  L  V +V  +     + LAV+
Sbjct: 449 SLA--ARADGTVWAWGDNAFGQLGDGTTTQRLLPVQVPGLAGVDTVSSMH---QHSLAVS 503

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G V+++G   +  LG G     L P  +         +V V+AG  H +AL + G V+
Sbjct: 504 RDGTVWAWGFNGSGRLGDGTTLSRLTPVQVPGLSS----MVAVAAGSTHSLALRADGTVW 559

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
            WG    GALG G  + +  P  +  L     V + A    +  +   GSV+ +G+ G G
Sbjct: 560 AWGDNSNGALGDGTTLRRLSPVQVPGLSG--VVALAAGNGYSLAVDAQGSVWAWGYNGMG 617

Query: 407 SLGFPDRGVSDKVLRPRILDSLRA--HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            LG       D    PR+  +       V  ++ G  H++ +   G  + +G N++ QLG
Sbjct: 618 QLG-------DGTTTPRVTPTQAPALSGVVALAAGDSHSLALRADGVAWAWGGNDQGQLG 670

Query: 465 HDT 467
             T
Sbjct: 671 DAT 673



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 158/374 (42%), Gaps = 23/374 (6%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q+  G  H+L++ S+ +V++ G +  G LG G   TQ +    +   S   VV ++    
Sbjct: 41  QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLP---VRVQSLDSVVALAVGYQ 97

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           H+  +   G V+  GDN     G   D    +  P  V +L GV    + AG + +  L 
Sbjct: 98  HSLALRSDGTVWAWGDNFFGQLGDGSDAQSQV--PIQVWSLNGVVA--IAAGDHHSLALL 153

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V   G N HGQLG   T+  P P  +  L     VV ++AG ++ LAV  +G V +
Sbjct: 154 SDGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLS---GVVALSAGSTHSLAVLSDGKVKA 210

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G      LG G   +   P  + +       V  V AG  H +AL S G V  WG+   
Sbjct: 211 WGDNYYGQLGDGSSTERWTPVLVSSL----TGVKSVVAGTFHSLALCSDGTVRAWGENGS 266

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG      + +P  +  L +  A+   A    +  L   G+V  +G    G +G    
Sbjct: 267 GQLGISSTTRRPVPVVVPGLTNVQAL--AAGSAHSLALRSDGTVRAWGNNDHGQVG---N 321

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
           G   + L P  +  +    +  I+ G  H++ +   G  + +GD+ + QLG       L 
Sbjct: 322 GTISQQLTPVQVPGV--GRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLR 379

Query: 474 PTEIFIQEMEEDTG 487
           P  +  Q +    G
Sbjct: 380 PARVLGQRIRMPLG 393



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 16/258 (6%)

Query: 209 RLVEALKGVPC--KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           R+  AL   P   +QV AG   +  L   G V   G NT+GQLG G  + +  P  +  L
Sbjct: 27  RIEAALTPPPLGHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSL 86

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
           +   SVV +A G  + LA+  +G V+++  G NF    G+  D      IQ +   G  V
Sbjct: 87  D---SVVALAVGYQHSLALRSDGTVWAW--GDNFFGQLGDGSDAQSQVPIQVWSLNG--V 139

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           V ++AGD H +AL S G V+ WG    G LG    +   LP  +  L     V + A   
Sbjct: 140 VAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLSG--VVALSAGST 197

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            +  ++  G V  +G   +G LG    G S +   P ++ SL    V  +  G +H++ +
Sbjct: 198 HSLAVLSDGKVKAWGDNYYGQLG---DGSSTERWTPVLVSSLTG--VKSVVAGTFHSLAL 252

Query: 447 TDRGRLFGFGDNERAQLG 464
              G +  +G+N   QLG
Sbjct: 253 CSDGTVRAWGENGSGQLG 270



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 113/260 (43%), Gaps = 19/260 (7%)

Query: 115  MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            M ++ G  H+L L S+ +V++ G +  G LG    T + V    I  P    VV ++A  
Sbjct: 840  MAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVP---IQVPGLTGVVSIAAGT 896

Query: 174  NHAAFVLQSGQVFTCGDN--SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
            +H+  V   G V+  G N       G +    P   P  V  L G+    V AG   +  
Sbjct: 897  HHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSP---PVQVPGLAGM--VSVAAGTYHSLA 951

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            +   G V   G N HGQLG G T  R  P    P+     V+  AA   + L V  +G V
Sbjct: 952  VHSNGTVWAWGYNNHGQLGDGTTTQRLLP---VPISSSSGVIAAAAN-WHSLVVRTDGTV 1007

Query: 292  YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
            + +GS +   LG G   D    R + T       V  +S+G  H +AL S G V+ WG G
Sbjct: 1008 WGWGSNNASQLGDGSTSD----RKMPTPSSVPNGVRSISSGANHSLALRSDGTVWAWGFG 1063

Query: 352  YCGALGHGDEIDKTLPEPLS 371
              G LG G    + +P  +S
Sbjct: 1064 NSGQLGDGVMSMRLVPAGVS 1083


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 20/255 (7%)

Query: 208 PRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           P LV+   K +    ++AG  ++  +T  G+V+T G N  GQLG GD      P+ I  L
Sbjct: 220 PVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSL 279

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
               S+V IA G  +M A++ +G +Y++G G    LGHG+    L P+ +  F ++   +
Sbjct: 280 SN-KSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKI 338

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALG---------------HGDEIDKTLPEPLS 371
           V+V+ G    +A+  +G ++++G G  G LG                 D +  +LP+ + 
Sbjct: 339 VQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVK 398

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH 431
           +L+S    +V      T  +     VY +GW   G LGF DR      L P+ + SL   
Sbjct: 399 ALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQ---LVPQRVPSLSGE 455

Query: 432 HVSQISTGLYHTVVV 446
            +S +S G  HT++V
Sbjct: 456 EISSVSGGEKHTLIV 470



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 20/251 (7%)

Query: 158 INFPSAA-HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
           ++F S +  +V +SA   ++A V  +G V+T G N     G  D       PR++ +L  
Sbjct: 223 VDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYH-GNPRVIRSLSN 281

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQI 275
                +  G      ++  G ++T G    GQLGHG       PK +   E +   +VQ+
Sbjct: 282 KSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQV 341

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLG------------HGEQHDELQ---PRAIQTFR 320
           A G ++ +AV+ NG ++SFG G    LG            +G++ D L+   P+ ++   
Sbjct: 342 ATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKAL- 400

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
            + + V +V+ G  H +A+ +   VYTWG G  G LG GD   + +P+ + SL       
Sbjct: 401 -ESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISS 459

Query: 381 VCARKRKTFVL 391
           V   ++ T ++
Sbjct: 460 VSGGEKHTLIV 470



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 141/375 (37%), Gaps = 48/375 (12%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
           SV S G    G LG      Q +    I       + Q++  E H+  V + G V++ G 
Sbjct: 2   SVISFGVGKQGQLGLDVNKDQ-LDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGR 60

Query: 191 NSSFCCGH--RDTNRPIFRPRLVEALKGVPCKQVTAG------LNFTGFLTIRGHVHTCG 242
                 GH  +    P   P L++AL+     +V  G      L  TG +   G +H   
Sbjct: 61  GKEGELGHPQKAMTAP---PALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQLHEID 117

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPL------------EEVGSVVQIAAGPSYMLAVTGNGV 290
           +   G    G  ++    KS A              E+     + A+        T NG+
Sbjct: 118 ATKSGVKSQGGLVEMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSVLQDNPTANGL 177

Query: 291 VYSFGSGSNFCLGHG--EQHDELQPR-----------------AIQTFRRKGIHVVRVSA 331
           V          L     +   E QP                   +  F  K I +V +SA
Sbjct: 178 VTDDQEEEEEFLPEAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISA 237

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           G  +  A+ S+G VYTWG    G LG GD      P  + SL +   V +   ++    +
Sbjct: 238 GWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAI 297

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR--ILDSLRAHHVSQISTGLYHTVVVTDR 449
             +G +Y +G   FG LG    G    +L P+  +    +   + Q++TG   T+ V++ 
Sbjct: 298 SKSGDLYTWGLGVFGQLG---HGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSEN 354

Query: 450 GRLFGFGDNERAQLG 464
           G LF FG  E  QLG
Sbjct: 355 GELFSFGHGEYGQLG 369



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 18/176 (10%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA-AHVVQVSAS 172
           + I  GR H   IS S  +++ G  + G LGHG   +       + F      +VQV+  
Sbjct: 285 VNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATG 344

Query: 173 ENHAAFVLQSGQVFTCG----------DNSSFC----CGHRDTNRPIFRPRLVEALKGVP 218
            N    V ++G++F+ G          +++ +      G RD +     P+ V+AL+ V 
Sbjct: 345 ANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVK 404

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSV 272
            ++V  G   T  +T    V+T G  + G LG GD   +  P+ +  L  EE+ SV
Sbjct: 405 VRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISSV 460



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 359 GDEIDKTLPEPL---SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           G+ +DK    P+      KS   V + A    +  +  TG+VY +G+   G LG  DR  
Sbjct: 210 GEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWY 269

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
                 PR++ SL    +  I+ G  H   ++  G L+ +G     QLGH  L+  L P 
Sbjct: 270 HG---NPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPK 326

Query: 476 EIFIQEMEE 484
           ++   E ++
Sbjct: 327 KVLYFEQQQ 335



 Score = 38.9 bits (89), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           SV  FG    G LG     V+   L P ++  L+   + QI+ G  H++ VT+ G ++ +
Sbjct: 2   SVISFGVGKQGQLGL---DVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSW 58

Query: 456 GDNERAQLGH 465
           G  +  +LGH
Sbjct: 59  GRGKEGELGH 68


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  IS G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDISIGDSHCLSLSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 128/266 (48%), Gaps = 14/266 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           HTL   +   VFS G    G LGHG  +TQ              VV VSA   H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
            G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+ 
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642

Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
            CLG G  +   L+P+ I+        +V +S GD H ++L     VY WG    G  G 
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699

Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
           G+     T P+ +S L      Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V +S  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
           niloticus]
          Length = 531

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNG 289
           ++T    V   G N    LG GD+L    PK +  L     V +   +GP  +LA T +G
Sbjct: 36  YITNDDEVFVFGLNCSNCLGTGDSLSTIVPKKLDFLSGRKVVSLSYGSGPHILLA-TEDG 94

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            ++++G      LG+G  +  + P  +      +K   V  V+ G  H +AL  +G VY 
Sbjct: 95  ELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKK---VTEVACGSHHSMALTDTGEVYA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +SS L++ +AV +   +  +  +VD G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     + P  L  L+   V QI +G  H++ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P +I  ++
Sbjct: 269 NKSNQLSPVQILTEK 283



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 129/279 (46%), Gaps = 7/279 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 184
           + ++  VF  G +    LG G   +  V   +++F S   VV +S  S  H     + G+
Sbjct: 37  ITNDDEVFVFGLNCSNCLGTGDSLSTIVP-KKLDFLSGRKVVSLSYGSGPHILLATEDGE 95

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
           +F  G N     G+  TN+ +  P LV A L      +V  G + +  LT  G V+  G 
Sbjct: 96  LFAWGHNGYSQLGNGTTNQGV-APVLVSANLLNKKVTEVACGSHHSMALTDTGEVYAWGY 154

Query: 244 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
           N  GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G   N  LG
Sbjct: 155 NNCGQVGSGSTANQPTPRRVSSCLQNKVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLG 214

Query: 304 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
            G   +++ P   +    +G+ V ++ +G  H +AL   G +Y WG    G LG G++ +
Sbjct: 215 LGNNGNQVTP--CRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLGTGNKSN 272

Query: 364 KTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
           +  P  + + K  +  +  C     +     +G VY +G
Sbjct: 273 QLSPVQILTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 3/240 (1%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           +S N A ++    +VF  G N S C G  D+   I  P+ ++ L G     ++ G     
Sbjct: 29  SSANEAIYITNDDEVFVFGLNCSNCLGTGDSLSTIV-PKKLDFLSGRKVVSLSYGSGPHI 87

Query: 231 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
            L T  G +   G N + QLG+G T     P  ++       V ++A G  + +A+T  G
Sbjct: 88  LLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTDTG 147

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VY++G  +   +G G   ++  PR + +  +  +  V +  G    +A+  +G VY WG
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKV-AVSIVCGQTSSLAVVDNGEVYGWG 206

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               G LG G+  ++  P  L  L+     Q+ +    +  L D G +Y +G   +G LG
Sbjct: 207 YNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSGYAHSMALTDEGLLYAWGANTYGQLG 266


>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 393

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 160/368 (43%), Gaps = 35/368 (9%)

Query: 126 LISNSSVFSCGSSLCGVLGHG-PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           + +++S+ + G+   G LG G  E  + V    +N      V  V A   ++  +   G+
Sbjct: 1   MATHTSLIAWGAGEDGQLGIGINEEKEWVCV--VNALEPYKVRSVVAGSRNSLAICDDGK 58

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +FT G N     GH    +    P  V+AL  V   Q   G      +  +G  +  G N
Sbjct: 59  LFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 245 THGQLGH--------GDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            +GQ G         G TL R    P+  AP      V Q+AAG ++ + +T  G V+++
Sbjct: 119 EYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKL---VVRQVAAGGTHSVVLTREGHVWTW 175

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTF----RRKGIHVVR-VSAGDEHVVALDSSGYVYTWG 349
           G                 P  I+      R +G+  V+ ++ G  H +AL   G ++ WG
Sbjct: 176 GQ-------------PWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWG 222

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               G LG GD   ++ P P+  L     V + A    +  L D G VYG+G    G LG
Sbjct: 223 NNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 282

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
           F D   S K++ P+ ++ L    + Q+S G  H+V +T  GR+F FG  +  +LG+    
Sbjct: 283 FGDNDKSSKMV-PQKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKV 341

Query: 470 GCLEPTEI 477
              +P E+
Sbjct: 342 TTGQPVEV 349



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 14/207 (6%)

Query: 116 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF-TRINFPSAAHVVQVSASE 173
           Q+  G  H+++++    V++ G          P   + +S   R+       ++ V A  
Sbjct: 155 QVAAGGTHSVVLTREGHVWTWGQPWP------PGDIKQISVPVRVQGLEKVKLIAVGAFH 208

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           N A  + + G ++  G+N     G  DT +P  +P  V+ L G+    + AG   +  LT
Sbjct: 209 NLA--LQEDGTLWAWGNNEYGQLGTGDT-QPRSQPIPVQGLSGLTLVDIAAGGWHSTALT 265

Query: 234 IRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
             G V+  G   HG+LG GD     +  P+ +  L     +VQ++ G ++ +A+T +G +
Sbjct: 266 DDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGE-DIVQLSCGGTHSVALTQDGRM 324

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQT 318
           +SFG G +  LG+G++    QP  + T
Sbjct: 325 FSFGRGDHGRLGYGKKVTTGQPVEVPT 351


>gi|443693194|gb|ELT94624.1| hypothetical protein CAPTEDRAFT_225863 [Capitella teleta]
          Length = 1384

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 122/264 (46%), Gaps = 21/264 (7%)

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           + V  G      +T+   V T G  + GQLGHG+      P  +  L+   S++Q   G 
Sbjct: 544 RDVAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGLKG-KSIIQARCGE 602

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-----GIHVVRVSAGDE 334
            + L  + NG++ + G G+  CLGHG+     +PR I+   R       + VV V+ G  
Sbjct: 603 EFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEALLRDQLSLYSVDVVSVACGSH 662

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK-TFVLVD 393
           HV  + S   V+TWG+G  G LG G E D   P+ ++ +  +L+++ C   R  T +L D
Sbjct: 663 HVCVVGSESEVFTWGRGKNGRLGLGSEQDFCQPQEVT-VPDNLSIKECHCGRDGTLLLTD 721

Query: 394 TGSVYGFGWMGFGSLGFPDRG----------VSDKVLRPRILDSLRA---HHVSQISTGL 440
            GS+   G      LG   R              +V   +I   +R    H V  IS G 
Sbjct: 722 VGSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVRELCRHRVVDISLGP 781

Query: 441 YHTVVVTDRGRLFGFGDNERAQLG 464
           +H+ VV + G ++ FG N + QLG
Sbjct: 782 HHSAVVVEPGHVYTFGKNSKGQLG 805



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 112/273 (41%), Gaps = 25/273 (9%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H ++I+    VF+ G    G LGHG     C   + +       ++Q    E  
Sbjct: 546 VAVGSGHVIVITVERMVFTWGRGSKGQLGHG-NLESCHVPSLVEGLKGKSIIQARCGEEF 604

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL-------KGVPCKQVTAGLNF 228
           + F   +G + TCGD ++ C GH D      RPRL+EAL         V    V  G + 
Sbjct: 605 SLFASDNGIIMTCGDGTAGCLGHGDWC-STSRPRLIEALLRDQLSLYSVDVVSVACGSHH 663

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
              +     V T G   +G+LG G   D   P+ +   + + S+ +   G    L +T  
Sbjct: 664 VCVVGSESEVFTWGRGKNGRLGLGSEQDFCQPQEVTVPDNL-SIKECHCGRDGTLLLTDV 722

Query: 289 GVVYSFGS--GSNFCLGHGE----------QHDELQPRAIQTFRRKGIH--VVRVSAGDE 334
           G + + G+  G+   L H +             E+    I T  R+     VV +S G  
Sbjct: 723 GSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEVAEEKIFTPVRELCRHRVVDISLGPH 782

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           H   +   G+VYT+GK   G LG G+  ++  P
Sbjct: 783 HSAVVVEPGHVYTFGKNSKGQLGTGNSKEQDAP 815



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 12/208 (5%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           +  +A G  +++ +T   +V+++G GS   LGHG       P  ++    KG  +++   
Sbjct: 543 IRDVAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGL--KGKSIIQARC 600

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-------SLKSHLAVQVCAR 384
           G+E  +    +G + T G G  G LGHGD    + P  +        SL S   V V   
Sbjct: 601 GEEFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEALLRDQLSLYSVDVVSVACG 660

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
                V+     V+ +G    G LG    G      +P+ +       + +   G   T+
Sbjct: 661 SHHVCVVGSESEVFTWGRGKNGRLGL---GSEQDFCQPQEVTVPDNLSIKECHCGRDGTL 717

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCL 472
           ++TD G +   G+NE  +LG +  +G L
Sbjct: 718 LLTDVGSMLACGNNEGNKLGLNHRQGFL 745



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 108/290 (37%), Gaps = 46/290 (15%)

Query: 102 HSSDIVETSAGNQM-QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHG-------PETTQC 152
           H   +VE   G  + Q   G   +L  S N  + +CG    G LGHG       P   + 
Sbjct: 582 HVPSLVEGLKGKSIIQARCGEEFSLFASDNGIIMTCGDGTAGCLGHGDWCSTSRPRLIEA 641

Query: 153 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRL 210
           +   +++  S   VV V+   +H   V    +VFT G   N     G   + +   +P+ 
Sbjct: 642 LLRDQLSLYSV-DVVSVACGSHHVCVVGSESEVFTWGRGKNGRLGLG---SEQDFCQPQE 697

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-------------DTLDR 257
           V     +  K+   G + T  LT  G +  CG+N   +LG                  + 
Sbjct: 698 VTVPDNLSIKECHCGRDGTLLLTDVGSMLACGNNEGNKLGLNHRQGFLMAMKNIFTKTEV 757

Query: 258 PTPKSIAPLEEV--GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 315
              K   P+ E+    VV I+ GP +   V   G VY+FG  S   LG G   ++  P  
Sbjct: 758 AEEKIFTPVRELCRHRVVDISLGPHHSAVVVEPGHVYTFGKNSKGQLGTGNSKEQDAPIQ 817

Query: 316 IQTFRRKGIHVV----------------RVSAGDEHVVALDSSGYVYTWG 349
           ++ F  K   V                 RV  G+ + VA      +Y WG
Sbjct: 818 VKAFEDKPAFVCKFLCYVAFSEICSSLQRVRCGESYTVAGTVDNGLYFWG 867



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 10/158 (6%)

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 388
           V+ G  HV+ +     V+TWG+G  G LGHG+     +P  +  LK    +Q    +  +
Sbjct: 546 VAVGSGHVIVITVERMVFTWGRGSKGQLGHGNLESCHVPSLVEGLKGKSIIQARCGEEFS 605

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS-------QISTGLY 441
               D G +   G    G LG  D   +    RPR++++L    +S        ++ G +
Sbjct: 606 LFASDNGIIMTCGDGTAGCLGHGDWCSTS---RPRLIEALLRDQLSLYSVDVVSVACGSH 662

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           H  VV     +F +G  +  +LG  + +   +P E+ +
Sbjct: 663 HVCVVGSESEVFTWGRGKNGRLGLGSEQDFCQPQEVTV 700


>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
 gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
           15441]
          Length = 392

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 156/349 (44%), Gaps = 15/349 (4%)

Query: 130 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           S ++  GS   GVLG      +  S   ++    + V+ V    +H   + + G V+T G
Sbjct: 51  SVIYGTGSDANGVLGSSSVKGKTTSPVPVD--DLSDVLMVDTGTSHTVALQKDGTVWTWG 108

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            ++    G+         P  V+ L  V  KQV AG NFT  L   G V   G N  GQL
Sbjct: 109 WSAYGELGNEKAKSTEKTPHHVKWLSDV--KQVRAGENFTLALKEDGTVWAFGKNRSGQL 166

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G G T  R  P  ++ L +   +V I AG  + LA++ +G V+++G+ S   LG+G +  
Sbjct: 167 GDGTTETRVKPVQVSGLTD---IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREK 223

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
            LQP  +         V+ +S G++   A+ S+G VY WG    G LG G    +  P  
Sbjct: 224 ALQPVQVSEL----TDVIAISTGEKQGYAVTSNGDVYGWGYN-QGKLGDGTNKSRNSPVL 278

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           +  +   +AV   + K+ T  L + G+V+ +G    G LG+              L+S  
Sbjct: 279 IDGIYDVIAVD--SGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTE 336

Query: 430 A-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             + +  I  G +H+  +   G ++ +G N   +LG    +  + P +I
Sbjct: 337 PLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKI 385



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 17/220 (7%)

Query: 104 SDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 163
           +DIV   AG +  +        L  + +V++ G++  G LG+G   T+  +   +     
Sbjct: 184 TDIVAIDAGEEFSLA-------LSEDGTVWAWGNNSVGQLGNG---TREKALQPVQVSEL 233

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
             V+ +S  E     V  +G V+  G N         TN+    P L++ +  V    V 
Sbjct: 234 TDVIAISTGEKQGYAVTSNGDVYGWGYNQGKLG--DGTNKSRNSPVLIDGIYDVIA--VD 289

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSI--APLEEVGSVVQIAAGPS 280
           +G   T  L   G V   G+NTHGQLG+G  ++   TP  +     E +  +V I AG  
Sbjct: 290 SGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGF 349

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
           +  A+  +G V+S+G  SN  LG G    ++ P  I+T  
Sbjct: 350 HSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKIETIN 389


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 145/325 (44%), Gaps = 20/325 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V Q+   + H A V + G+VFT G++S    GH    +   RP LVE+L       V  G
Sbjct: 305 VHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGH-GFEKDFGRPHLVESLAITNVTFVACG 363

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYM 282
              +  ++  G + T G  THG   LGHG  +    PK ++ PLE +  VV +A G  + 
Sbjct: 364 EYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGL-QVVSVACGTWHS 422

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL--- 339
              T NG +++ G G    LGHG++     P+ +Q     G   ++V+ G  H  A+   
Sbjct: 423 ALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQLL--SGHKAIKVACGVWHSAAIIEV 480

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                   S+  ++TWG G    LGH ++     P  ++++  +   QV      T  L 
Sbjct: 481 MGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTVALT 540

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
            +G V+  G   +G LG P+   SD  +   +   L    V +IS G  H  V+T R  L
Sbjct: 541 TSGHVFTMGGTAYGQLGNPN---SDGKVPILVRGKLVGEFVEEISCGANHVAVLTSRSEL 597

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEI 477
           + +G     +LGH        PT +
Sbjct: 598 YTWGRGANGRLGHGDTDDQKSPTMV 622



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 126/272 (46%), Gaps = 19/272 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSL--CGVLGHGPETTQCVSFTRINFP-SAAHVVQVSAS 172
           +  G YH+  +S+S  +F+ G      G+LGHG + +  +   R++ P     VV V+  
Sbjct: 360 VACGEYHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIP-KRVSGPLEGLQVVSVACG 418

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG------- 225
             H+A    +G++FT GD      GH D +   + P+ V+ L G    +V  G       
Sbjct: 419 TWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAY-PKEVQLLSGHKAIKVACGVWHSAAI 477

Query: 226 ---LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
              +  +G  T    + T G     +LGH +      P  +A + E  +  Q+A G +  
Sbjct: 478 IEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEY-NFHQVACGYTMT 536

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+T +G V++ G  +   LG+    D   P  ++  +  G  V  +S G  HV  L S 
Sbjct: 537 VALTTSGHVFTMGGTAYGQLGN-PNSDGKVPILVRG-KLVGEFVEEISCGANHVAVLTSR 594

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
             +YTWG+G  G LGHGD  D+  P  + +LK
Sbjct: 595 SELYTWGRGANGRLGHGDTDDQKSPTMVEALK 626



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 141/345 (40%), Gaps = 36/345 (10%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVV 167
           QI  G  H  L++    VF+ G    G LGHG       P   + ++ T + F       
Sbjct: 307 QIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTF------- 359

Query: 168 QVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTA 224
            V+  E H+  V  SG +FT GD +  +   GH  T+   + P+ V   L+G+    V  
Sbjct: 360 -VACGEYHSCAVSSSGDLFTWGDGTHGAGLLGH-GTDVSYWIPKRVSGPLEGLQVVSVAC 417

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   +   T  G + T G    G LGHGD      PK +  L      +++A G  +  A
Sbjct: 418 GTWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQLLSG-HKAIKVACGVWHSAA 476

Query: 285 V----------TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           +          T    ++++G G  + LGH  +   L+P  +        H  +V+ G  
Sbjct: 477 IIEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFH--QVACGYT 534

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
             VAL +SG+V+T G    G LG+ +   K        L      ++        VL   
Sbjct: 535 MTVALTTSGHVFTMGGTAYGQLGNPNSDGKVPILVRGKLVGEFVEEISCGANHVAVLTSR 594

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
             +Y +G    G LG    G +D    P ++++L+  H+  IS G
Sbjct: 595 SELYTWGRGANGRLG---HGDTDDQKSPTMVEALKDRHIKNISCG 636



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 19/301 (6%)

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           G+V+  G++S            +  P+ +E+   +   Q+  G      +T +G V T G
Sbjct: 269 GEVWVDGNSSDGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWG 328

Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC- 301
            ++ G+LGHG   D   P  +  L  + +V  +A G  +  AV+ +G ++++G G++   
Sbjct: 329 EDSGGRLGHGFEKDFGRPHLVESLA-ITNVTFVACGEYHSCAVSSSGDLFTWGDGTHGAG 387

Query: 302 -LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LGHG       P+ + +   +G+ VV V+ G  H     S+G ++T G G  G LGHGD
Sbjct: 388 LLGHGTDVSYWIPKRV-SGPLEGLQVVSVACGTWHSALATSNGKLFTIGDGRFGVLGHGD 446

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD--------TGSVYGFGWMGFGS---LG 409
                 P+ +  L  H A++V      +  +++        T +   F W G G    LG
Sbjct: 447 RDSVAYPKEVQLLSGHKAIKVACGVWHSAAIIEVMGPSGSNTSAKRLFTW-GDGDQYRLG 505

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
             ++   +  L P  + ++  ++  Q++ G   TV +T  G +F  G     QLG+    
Sbjct: 506 HVNK---ETYLEPTCVAAVAEYNFHQVACGYTMTVALTTSGHVFTMGGTAYGQLGNPNSD 562

Query: 470 G 470
           G
Sbjct: 563 G 563



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 30/236 (12%)

Query: 115 MQITTGRYHTLL-ISNSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
           + +  G +H+ L  SN  +F+ G    GVLGHG   +  V++ + +   S    ++V+  
Sbjct: 413 VSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDS--VAYPKEVQLLSGHKAIKVACG 470

Query: 173 ENHAAFVLQ----------SGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQ 221
             H+A +++          + ++FT GD   +  GH   N+  +  P  V A+      Q
Sbjct: 471 VWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGH--VNKETYLEPTCVAAVAEYNFHQ 528

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-----QIA 276
           V  G   T  LT  GHV T G   +GQLG+      P      P+   G +V     +I+
Sbjct: 529 VACGYTMTVALTTSGHVFTMGGTAYGQLGN------PNSDGKVPILVRGKLVGEFVEEIS 582

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
            G +++  +T    +Y++G G+N  LGHG+  D+  P  ++  + +  H+  +S G
Sbjct: 583 CGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKSPTMVEALKDR--HIKNISCG 636



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 8/172 (4%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           D L P+ +++     +H  ++  GD H+  +   G V+TWG+   G LGHG E D   P 
Sbjct: 290 DVLTPKPLESDVVLDVH--QIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPH 347

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSV--YGFGWMGFGSLGFPDRGVSDKVLRP-RIL 425
            + SL       V   +  +  +  +G +  +G G  G G LG    G       P R+ 
Sbjct: 348 LVESLAITNVTFVACGEYHSCAVSSSGDLFTWGDGTHGAGLLG---HGTDVSYWIPKRVS 404

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             L    V  ++ G +H+ + T  G+LF  GD     LGH        P E+
Sbjct: 405 GPLEGLQVVSVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEV 456



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 25/187 (13%)

Query: 99  SVEHSSDIVETSAGNQMQITTGRYHTLLI--------SNSS---VFSCGSSLCGVLGHGP 147
           SV +  ++   S    +++  G +H+  I        SN+S   +F+ G      LGH  
Sbjct: 449 SVAYPKEVQLLSGHKAIKVACGVWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGHVN 508

Query: 148 ETT----QCVS-FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN 202
           + T     CV+     NF       QV+        +  SG VFT G  +    G+ +++
Sbjct: 509 KETYLEPTCVAAVAEYNFH------QVACGYTMTVALTTSGHVFTMGGTAYGQLGNPNSD 562

Query: 203 RPIFRPRLVE-ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
             +  P LV   L G   ++++ G N    LT R  ++T G   +G+LGHGDT D+ +P 
Sbjct: 563 GKV--PILVRGKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKSPT 620

Query: 262 SIAPLEE 268
            +  L++
Sbjct: 621 MVEALKD 627



 Score = 38.9 bits (89), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 3/127 (2%)

Query: 113 NQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N  Q+  G   T+ ++ S  VF+ G +  G LG+ P +   V            V ++S 
Sbjct: 525 NFHQVACGYTMTVALTTSGHVFTMGGTAYGQLGN-PNSDGKVPILVRGKLVGEFVEEISC 583

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             NH A +    +++T G  ++   GH DT+     P +VEALK    K ++ G  FT  
Sbjct: 584 GANHVAVLTSRSELYTWGRGANGRLGHGDTDDQK-SPTMVEALKDRHIKNISCGSTFTSC 642

Query: 232 LTIRGHV 238
           + +   V
Sbjct: 643 ICLHKWV 649


>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
 gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Rattus norvegicus]
          Length = 531

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 9/254 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  + + S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL + G ++ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPIQVCT-NLLVKQVVEVACGSHHSMALAADGELFAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G   CG +G G   ++  P  +++ L +   V +   +  +  ++D+G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269

Query: 468 LRGCLEPTEIFIQE 481
               L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 8/260 (3%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A V  +SASE  A +V  S +VF  G N S C G  D N+    P+ +EAL G   K ++
Sbjct: 24  ACVFGISASE--AIYVTDSDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKRIKSLS 80

Query: 224 AGLNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
            G      L+   G V+  G N + QLG+G T     P  +     V  VV++A G  + 
Sbjct: 81  YGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHS 140

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           +A+  +G ++++G  +   +G G   ++  PR +         VV ++ G    +A+  S
Sbjct: 141 MALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-KVVNIACGQTSSMAVLDS 199

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           G VY WG    G LG G+  ++  P  +++L      Q+      T  L D G +Y +G 
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGA 259

Query: 403 MGFGSLGFPDRGVSDKVLRP 422
             +G LG    G  + +L P
Sbjct: 260 NTYGQLG---TGSKNNLLSP 276



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G +   G N  GQ+G G T ++PTP+ +        VV IA G +  +AV  +G VY +
Sbjct: 146 DGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +      G+ V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--GVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
            LG G + +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H++ L ++  +F+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQ 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  VL SG+V+  G N +   G    N     P  V AL GV   Q+  G   T  LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALT 249

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 291
             G ++  G+NT+GQLG G   +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307

Query: 292 YSFG 295
           Y +G
Sbjct: 308 YMWG 311


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 147/303 (48%), Gaps = 26/303 (8%)

Query: 89  NWK-RVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHG 146
           +W+ R +R L++V+             +QI  G  H++ +++ S VF+ G  L G LGHG
Sbjct: 79  DWEPRWIRALETVK------------VVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHG 126

Query: 147 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI- 205
             +     F  +       +  +     +   +  +G+V   G  +S   G+ D +  I 
Sbjct: 127 DVSDVWFPFL-VKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIG 185

Query: 206 ---FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----HGDTLDRP 258
              + P  +++L      Q T G NF+ FL+  G +++ G   +GQLG      ++L+ P
Sbjct: 186 GNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLP 245

Query: 259 TPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
              ++  +   G  V+ ++ G S+ LA++ +G+VYS+GSG N+ LGHG   D   P+ + 
Sbjct: 246 YTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVA 305

Query: 318 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 377
                    V VSAG  H  A+ ++G +YTWG+ + G LG G  ID    + +  L + +
Sbjct: 306 MLEAD--PCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRV 363

Query: 378 AVQ 380
            ++
Sbjct: 364 ILK 366



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 149/342 (43%), Gaps = 13/342 (3%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V+SCG    G LG   E  +      +       V  ++    H   + ++G+V++ G N
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYN 65

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
            S   GH   +   + PR + AL+ V   Q+ AG + +  LT R  V T G   HGQLGH
Sbjct: 66  DSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGH 125

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 311
           GD  D   P  +  L+  G +  I  G     A+TG G V  FGS ++  LG+G+    +
Sbjct: 126 GDVSDVWFPFLVKGLQGKG-IKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGI 184

Query: 312 QPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
                   + K +    +++ + G    + L  +G +Y+ G    G LG   E  ++L  
Sbjct: 185 GGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNL 244

Query: 369 PLS------SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
           P +      S K      V      +  L + G VY +G     +LG    G ++    P
Sbjct: 245 PYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALG---HGGTEDTFTP 301

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           +++  L A     +S G YH+  V+  GR++ +G N   QLG
Sbjct: 302 KMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLG 343



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 15/186 (8%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFR-----RKGIHVVRVSAGDEHVVALDSSGYV 345
           VYS G G+   LG  ++      RA   F       + + V  ++ G +H + L  +G V
Sbjct: 6   VYSCGHGAGGRLGLNDE------RARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKV 59

Query: 346 YTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           Y+WG       GHG +++    P  + +L++   VQ+ A +  +  L D   V+ +G   
Sbjct: 60  YSWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGL 119

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG  D  VSD V  P ++  L+   +  I  G  +T  +T  G++ GFG     +LG
Sbjct: 120 HGQLGHGD--VSD-VWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLG 176

Query: 465 HDTLRG 470
           +  + G
Sbjct: 177 NGDVDG 182


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 155/332 (46%), Gaps = 27/332 (8%)

Query: 147 PETTQCVSFTRI----NFPSAAHV-----VQVSASENHAAFVLQSGQVFTCGDNS--SFC 195
           PET    +F +     N PS   +     + +S  + H+A + +SG+++T G N      
Sbjct: 10  PETGAIFTFGKSRFADNLPSKFWIRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLG 69

Query: 196 CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL 255
            GH    +P  +P  V++LK      V  G + T   T  G +++ G+ + GQLG GD  
Sbjct: 70  LGHM---KPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQ 126

Query: 256 DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 315
              +P+ I   E+   +  ++AG  +  A+T +G +Y +GSGS   LG G       P+ 
Sbjct: 127 CATSPQLINLPEQKYKL--LSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSVETPKE 184

Query: 316 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI--DKTLPEPLSSL 373
           ++        V  VS G  H   +   G +YT+G+   G LG  ++   D T P+ + S+
Sbjct: 185 LKFHSS----VSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESI 240

Query: 374 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR-PRILDSLRAHH 432
              + +  C     T V+ D G++Y FG    G LG    G S   L  P+ +  L  H 
Sbjct: 241 TEKIKLVACGGAH-TAVISDVGNLYTFGDGMHGQLG---NGPSLLQLSLPQKVARLSEHK 296

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              +S G  HT V+T++G ++ FGD    +LG
Sbjct: 297 CKYVSCGDNHTAVITEKGAMYTFGDGRHGKLG 328



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 121/245 (49%), Gaps = 10/245 (4%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           ++ G   +  +T  G ++T GSN  GQLG G       P  +  L++ G V  +A G S+
Sbjct: 41  ISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEG-VNLVACGRSH 99

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            +  T  G +YSFG+GS+  LG G+      P+ I    +K      +SAG +H  AL +
Sbjct: 100 TIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLINLPEQK---YKLLSAGTDHSAALTT 156

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-VCARKRKTFVLVDTGSVYGF 400
            G +Y WG G  G LG G+      P+    LK H +V  V      T ++ D G +Y F
Sbjct: 157 DGTLYMWGSGSEGQLGLGNTDSVETPK---ELKFHSSVSWVSCGYYHTAIVTDDGKLYTF 213

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   FG LG  +  + D    P+ ++S+    +  ++ G  HT V++D G L+ FGD   
Sbjct: 214 GEKEFGKLGLTEDQLED-TTTPKHVESI-TEKIKLVACGGAHTAVISDVGNLYTFGDGMH 271

Query: 461 AQLGH 465
            QLG+
Sbjct: 272 GQLGN 276



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 146/316 (46%), Gaps = 22/316 (6%)

Query: 115 MQITTGRYHTLLISNSS-VFSCGSSLCGVLG--HGPETTQ--CVSFTRINFPSAAHVVQV 169
           M I+ G  H+ +I+ S  +++ GS+  G LG  H   TT+  CV   +        V  V
Sbjct: 39  MHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLK-----QEGVNLV 93

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           +   +H     ++G++++ G  S    G  D       P+L+  L     K ++AG + +
Sbjct: 94  ACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCAT-SPQLIN-LPEQKYKLLSAGTDHS 151

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT  G ++  GS + GQLG G+T    TPK    L+   SV  ++ G  +   VT +G
Sbjct: 152 AALTTDGTLYMWGSGSEGQLGLGNTDSVETPKE---LKFHSSVSWVSCGYYHTAIVTDDG 208

Query: 290 VVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            +Y+FG      LG  E    D   P+ +++   K   +  V+ G  H   +   G +YT
Sbjct: 209 KLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEK---IKLVACGGAHTAVISDVGNLYT 265

Query: 348 WGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           +G G  G LG+G  + + +LP+ ++ L  H    V      T V+ + G++Y FG    G
Sbjct: 266 FGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHG 325

Query: 407 SLGFPDRGVSDKVLRP 422
            LG  +    + + +P
Sbjct: 326 KLGISEEDFCN-IFKP 340



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
            + I+ G  +   +T +G +Y+FGS     LG G      +P  +++ +++G+++V  + 
Sbjct: 38  AMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLV--AC 95

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
           G  H +    +G +Y++G G  G LG GD    T P+ L +L       + A    +  L
Sbjct: 96  GRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQ-LINLPEQKYKLLSAGTDHSAAL 154

Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH-VSQISTGLYHTVVVTDRG 450
              G++Y +G    G LG    G +D V  P+    L+ H  VS +S G YHT +VTD G
Sbjct: 155 TTDGTLYMWGSGSEGQLGL---GNTDSVETPK---ELKFHSSVSWVSCGYYHTAIVTDDG 208

Query: 451 RLFGFGDNERAQLG--HDTLRGCLEPTEI 477
           +L+ FG+ E  +LG   D L     P  +
Sbjct: 209 KLYTFGEKEFGKLGLTEDQLEDTTTPKHV 237



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 13/142 (9%)

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +G ++T+GK               LP     +++  A+ +      + ++ ++G +Y FG
Sbjct: 12  TGAIFTFGK---------SRFADNLPSKFW-IRNDKAMHISCGDEHSAIITESGRLYTFG 61

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
              +G LG    G      +P  + SL+   V+ ++ G  HT+V T  GRL+ FG     
Sbjct: 62  SNDWGQLGL---GHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDG 118

Query: 462 QLGHDTLRGCLEPTEIFIQEME 483
           QLG    +    P  I + E +
Sbjct: 119 QLGTGDAQCATSPQLINLPEQK 140


>gi|148231237|ref|NP_001082607.1| serine/threonine-protein kinase Nek9 [Xenopus laevis]
 gi|49522774|gb|AAH74227.1| LOC398600 protein [Xenopus laevis]
          Length = 944

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 125/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++  KG    +QV AG      +T+   ++T      GS  HGQLGHGD      PK
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 319
            +  L+   SV +++ G  +   +T  G +YSFGS    CLG  +    + L+P  +  F
Sbjct: 401 HVEKLQG-KSVQKVSCGSDFTACITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFF 459

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
             + +   +VS GD H++AL  S  VY+WG G  G LG   E D   P+ +   +    V
Sbjct: 460 LNEPVD--QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIV 517

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 429
            VC     +F+L  TG V   G      LG        ++ +  +         +   L 
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 367
           P+ +  F+  G    +V AGD H   +     +YTW     G    G LGHGD      P
Sbjct: 341 PQKLDVFK-GGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
           + +  L+     +V      T  + D G +Y FG   +G LG  ++    +VL P ++D 
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTACITDEGQLYSFGSDYYGCLGV-NQSAGSEVLEPLLVDF 458

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
                V Q+S G  H + +T    ++ +G  E  +LG D+      P ++ +Q
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 133/314 (42%), Gaps = 35/314 (11%)

Query: 107 VETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSA 163
           VE   G  +Q ++ G   T  I++   ++S GS   G LG +    ++ +    ++F   
Sbjct: 402 VEKLQGKSVQKVSCGSDFTACITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLN 461

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVP 218
             V QVS  ++H   + +S  V++ G      CG       D+   ++ P+ VE  +G+ 
Sbjct: 462 EPVDQVSCGDSHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLC 515

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEE 268
              V  G + +  LT+ G V  CG N H +LG          H    + P   S+   ++
Sbjct: 516 IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQ 575

Query: 269 VG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
           +    +  I+ G ++  A+   G + +FGS     LG G+    L    +      G  V
Sbjct: 576 LSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQV 634

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAV 379
           +RVS GDE   A  +  +++ WG G  G L         G +I  + P P+     H+  
Sbjct: 635 IRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTD 694

Query: 380 QVCARKRKTFVLVD 393
             C R   T ++V+
Sbjct: 695 LSC-RGWHTILIVE 707


>gi|408500686|ref|YP_006864605.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465510|gb|AFU71039.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1073

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 21/357 (5%)

Query: 116 QITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFT-RINFPSAAHVVQVSASE 173
           Q + G+  +L + +  V +S G++  G LG  P  +       R++ P+  H +Q+SA +
Sbjct: 76  QFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGD 135

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRP-RLVEALKGVPC-KQVTAGLNFTGF 231
           ++A  +  +  +++ G+N     G   ++ P   P +++ ++       QV+ G N+   
Sbjct: 136 DYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVLA 195

Query: 232 LTIRGHVHTCGSNTHGQLGH--GDTLDRPTPKSIAP--LEEVGSVVQIAAGPSYMLAVTG 287
           +   G V++ G N+ GQLG   G T+    P +  P  L +   + Q+ AG    LA+  
Sbjct: 196 VCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGGKASLALAS 255

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           +G VYS+G  S+  LG      E   RA +     G++  ++SAG  H++A+DS G  Y+
Sbjct: 256 DGSVYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILAVDSDGNTYS 315

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG G     G        LP+    +++ L   + A    + V    G++Y +G    G 
Sbjct: 316 WGYG-----GTSQPSKVALPD---GIRTRL---ISAGHDYSLVTASDGNIYSWGDNSSGQ 364

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           LG  D G  +   +P    +      +Q   G  H + +   G L+G+GDN  +QLG
Sbjct: 365 LG-QDTG-GETTNQPGKAVTPDGVTYTQAIAGYRHILAMGSDGYLYGWGDNSSSQLG 419



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 142/314 (45%), Gaps = 34/314 (10%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR-PIFRPRLVEALKGVPCKQVTAGL 226
           Q SA ++ +  +   G +++ G+NS    G   T+  P  RP  V+   G    Q++AG 
Sbjct: 76  QFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDPADRPGRVDVPNGTHFLQISAGD 135

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           ++   + I  H+++ G+N  GQ G G   +   P  + I  +    S VQ++ GP+Y+LA
Sbjct: 136 DYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNATQSFVQVSTGPNYVLA 195

Query: 285 VTGNGVVYSFGSGSNFCLGHG-----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
           V  +G VYS+G  S+  LG         +    P  +     KG+ + +V+AG +  +AL
Sbjct: 196 VCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSL--PKGVKITQVTAGGKASLAL 253

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEP------LSSLKSHLAVQVCARKRKTFVLVD 393
            S G VY+WG    G LG       +  EP      +++       Q+ A  R    +  
Sbjct: 254 ASDGSVYSWGDNSSGQLGR----TPSASEPANRAYKMTTADGMNFSQISAGYRHILAVDS 309

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            G+ Y +G   +G    P +      +R R+           IS G  +++V    G ++
Sbjct: 310 DGNTYSWG---YGGTSQPSKVALPDGIRTRL-----------ISAGHDYSLVTASDGNIY 355

Query: 454 GFGDNERAQLGHDT 467
            +GDN   QLG DT
Sbjct: 356 SWGDNSSGQLGQDT 369



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 113/260 (43%), Gaps = 26/260 (10%)

Query: 213 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           A+  +   Q +AG +F+  L   G +++ G+N+ GQLG        TP    P +  G V
Sbjct: 68  AIGDIRFSQFSAGKDFSLALDSLGVLYSWGNNSQGQLGR-------TPTDSDPADRPGRV 120

Query: 273 --------VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKG 323
                   +QI+AG  Y +A+  N  +YS+G+      G G      L P  +       
Sbjct: 121 DVPNGTHFLQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQVIPSVNAT 180

Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-------PEPLSSLKSH 376
              V+VS G  +V+A+ S G VY+WG    G LG   E+  T+       P P+S  K  
Sbjct: 181 QSFVQVSTGPNYVLAVCSDGTVYSWGDNSSGQLGR--EVGGTMTHYGPGNPNPVSLPKGV 238

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
              QV A  + +  L   GSVY +G    G LG      S+   R   + +    + SQI
Sbjct: 239 KITQVTAGGKASLALASDGSVYSWGDNSSGQLGR-TPSASEPANRAYKMTTADGMNFSQI 297

Query: 437 STGLYHTVVVTDRGRLFGFG 456
           S G  H + V   G  + +G
Sbjct: 298 SAGYRHILAVDSDGNTYSWG 317



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 142/336 (42%), Gaps = 30/336 (8%)

Query: 145 HGPETT-QCVSFTRINFPSAAHVVQVSASENHAAFVL---QSGQVFTCGDNSSFCCGHRD 200
            GP+T  Q V  T    P     ++ S  ++ A F L     G +++ G N  +  GH  
Sbjct: 583 EGPQTGGQSVKLTP---PQGTRGIRFSWIQSGADFSLALGSDGNLYSWGINYDYQLGHTT 639

Query: 201 TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPT 259
           +++P+    +VE   GV   Q  AG  F   L   G+V+T G+NT+ QLG      +   
Sbjct: 640 SDKPV----VVETPAGVRYTQAAAGQKFALALGSDGYVYTWGNNTYDQLGRSTFGNNHNA 695

Query: 260 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           P  + P   +    ++ AG  + LA+  +G +Y++G  S   LG G      +   ++  
Sbjct: 696 PDKVTPPAGI-HYTRVYAGDCFALALGSDGNLYAWGDNSAGALGQGRIGATSR-NPLRVV 753

Query: 320 RRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 377
             +GI   +V  G   +HV+AL S G +Y+WG      LG            L++L   L
Sbjct: 754 APEGITFTQVFTGPSSKHVLALGSDGNLYSWGYDDSFQLGRQRNA-------LTALGDPL 806

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH------ 431
             +V A    TF    TG  +        +L     G+  ++   +++    ++      
Sbjct: 807 PGKVQAPAGITFTQASTGLNFSLALGSDNNLYSWGNGLKSQLGNAQMISMYPSNVIMPSG 866

Query: 432 -HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            + ++   G Y  +     G L+ +G N+  QLG D
Sbjct: 867 INFTRFVAGRYFAIAAGSDGNLYSWGYNDYGQLGRD 902



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 128/292 (43%), Gaps = 50/292 (17%)

Query: 212 EALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP----TPKSIAPLE 267
           +  +G+    + +G +F+  L   G++++ G N   QLGH  T D+P    TP  +    
Sbjct: 598 QGTRGIRFSWIQSGADFSLALGSDGNLYSWGINYDYQLGH-TTSDKPVVVETPAGV---- 652

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---GEQH---DELQPRAIQTFRR 321
                 Q AAG  + LA+  +G VY++G+ +   LG    G  H   D++ P A      
Sbjct: 653 ---RYTQAAAGQKFALALGSDGYVYTWGNNTYDQLGRSTFGNNHNAPDKVTPPA------ 703

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----SHL 377
            GIH  RV AGD   +AL S G +Y WG    GALG G  I  T   PL  +     +  
Sbjct: 704 -GIHYTRVYAGDCFALALGSDGNLYAWGDNSAGALGQG-RIGATSRNPLRVVAPEGITFT 761

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGW----------MGFGSLGFPDRGVSDKVLRPRILDS 427
            V      +    L   G++Y +G+              +LG P  G   KV  P  +  
Sbjct: 762 QVFTGPSSKHVLALGSDGNLYSWGYDDSFQLGRQRNALTALGDPLPG---KVQAPAGI-- 816

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
                 +Q STGL  ++ +     L+ +G+  ++QLG+  +   + P+ + +
Sbjct: 817 ----TFTQASTGLNFSLALGSDNNLYSWGNGLKSQLGNAQMI-SMYPSNVIM 863



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 119/294 (40%), Gaps = 50/294 (17%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS---AAHVVQVS 170
           +QI+ G  + + I  N  ++S G++  G  G G  ++  +   ++  PS       VQVS
Sbjct: 129 LQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQV-IPSVNATQSFVQVS 187

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR----DTNRPIFRPRLVEALKGVPCKQVTAGL 226
              N+   V   G V++ GDNSS   G       T+     P  V   KGV   QVTAG 
Sbjct: 188 TGPNYVLAVCSDGTVYSWGDNSSGQLGREVGGTMTHYGPGNPNPVSLPKGVKITQVTAGG 247

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAV 285
             +  L   G V++ G N+ GQLG   +   P  ++       G +  QI+AG  ++LAV
Sbjct: 248 KASLALASDGSVYSWGDNSSGQLGRTPSASEPANRAYKMTTADGMNFSQISAGYRHILAV 307

Query: 286 TGNGVVYSFGSG-----SNFCLGHGEQ-------HD------------------------ 309
             +G  YS+G G     S   L  G +       HD                        
Sbjct: 308 DSDGNTYSWGYGGTSQPSKVALPDGIRTRLISAGHDYSLVTASDGNIYSWGDNSSGQLGQ 367

Query: 310 ----ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
               E   +  +     G+   +  AG  H++A+ S GY+Y WG      LG G
Sbjct: 368 DTGGETTNQPGKAVTPDGVTYTQAIAGYRHILAMGSDGYLYGWGDNSSSQLGTG 421



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 15/221 (6%)

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 311
           G+T    TP +I  +       Q +AG  + LA+   GV+YS+G+ S   LG      + 
Sbjct: 58  GNTTATLTPPAIGDIR----FSQFSAGKDFSLALDSLGVLYSWGNNSQGQLGRTPTDSDP 113

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP--EP 369
             R  +     G H +++SAGD++ VA+D + ++Y+WG    G  G G     +LP  + 
Sbjct: 114 ADRPGRVDVPNGTHFLQISAGDDYAVAIDINHHLYSWGNNEKGQAGQGISSSPSLPPNQV 173

Query: 370 LSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL-----RPR 423
           + S+ +  + VQV         +   G+VY +G    G LG   R V   +       P 
Sbjct: 174 IPSVNATQSFVQVSTGPNYVLAVCSDGTVYSWGDNSSGQLG---REVGGTMTHYGPGNPN 230

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            +   +   ++Q++ G   ++ +   G ++ +GDN   QLG
Sbjct: 231 PVSLPKGVKITQVTAGGKASLALASDGSVYSWGDNSSGQLG 271



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 14/247 (5%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV--SASENHAAFVLQSG 183
           L S+ ++++ G +  G LG G       +  R+  P      QV    S  H   +   G
Sbjct: 720 LGSDGNLYAWGDNSAGALGQGRIGATSRNPLRVVAPEGITFTQVFTGPSSKHVLALGSDG 779

Query: 184 QVFTCGDNSSFCCGHRDT-----NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
            +++ G + SF  G +         P+  P  V+A  G+   Q + GLNF+  L    ++
Sbjct: 780 NLYSWGYDDSFQLGRQRNALTALGDPL--PGKVQAPAGITFTQASTGLNFSLALGSDNNL 837

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
           ++ G+    QLG+   +       I P     +  +  AG  + +A   +G +YS+G   
Sbjct: 838 YSWGNGLKSQLGNAQMISMYPSNVIMPSGI--NFTRFVAGRYFAIAAGSDGNLYSWGYND 895

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
              LG       +  P  ++     GI +++  AGD H  A+ S G  Y+WGK   G LG
Sbjct: 896 YGQLGRDISDKSDYMPTKLEA--PAGITLIQPQAGDNHSSAIGSDGNTYSWGKSADGVLG 953

Query: 358 HGDEIDK 364
                D+
Sbjct: 954 RDTSGDQ 960



 Score = 39.7 bits (91), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 13/141 (9%)

Query: 113 NQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N  QI+ G  H L + S+ + +S G            T+Q    +++  P       +SA
Sbjct: 293 NFSQISAGYRHILAVDSDGNTYSWGYG---------GTSQP---SKVALPDGIRTRLISA 340

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             +++      G +++ GDNSS   G         +P       GV   Q  AG      
Sbjct: 341 GHDYSLVTASDGNIYSWGDNSSGQLGQDTGGETTNQPGKAVTPDGVTYTQAIAGYRHILA 400

Query: 232 LTIRGHVHTCGSNTHGQLGHG 252
           +   G+++  G N+  QLG G
Sbjct: 401 MGSDGYLYGWGDNSSSQLGTG 421


>gi|50543738|ref|XP_500035.1| YALI0A13299p [Yarrowia lipolytica]
 gi|49645900|emb|CAG83964.1| YALI0A13299p [Yarrowia lipolytica CLIB122]
          Length = 498

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 165/393 (41%), Gaps = 58/393 (14%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           VF+ G+     LG GPE    V   R++   +  +V ++    H   +   G+V++ G N
Sbjct: 90  VFAFGTGDMCELGLGPEKASTVKRPRLSPYLSKEIVDIAVGGQHGLVLDSQGRVWSWGGN 149

Query: 192 SSFCCGHRDTNRPIFR------------PRLVEALKGVPC--------KQVTAGLNFTGF 231
                G   +   + +            P+L  A + +P          ++ A  + +  
Sbjct: 150 DLGALGRDTSGHEVLKDMDADESDDEDDPKLNPA-ESIPALVDTDQRFVKIEASDSLSLA 208

Query: 232 LTIRGHVHTCGS--NTHGQLGHGDTL---DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           LT  G V   GS  N+ G +G  D +   +RP       +EE+ ++  IAAG  ++LA+T
Sbjct: 209 LTAEGDVWAWGSFRNSQGTMGFSDKVKVQNRPVK-----IEELSNIAAIAAGRDHVLALT 263

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYV 345
             G V+++G   NF LG       L PR +      G+ ++V V AG+ H  A+D+ G V
Sbjct: 264 QWGTVHTWGDSENFRLGWKSNRSTLSPREL------GLKNIVYVGAGEFHSFAIDTDGKV 317

Query: 346 YTWG---KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
             WG    G CG LG  D      P  + +L     V V   +  +  L   G+VY FG 
Sbjct: 318 LAWGLNQYGQCGILGQSDNAAVDGPTYVDALDGKDIVAVTGGEHHSLALSKDGTVYSFGR 377

Query: 403 MGFGSLGF-----PDRGVSDKVLRPRIL------------DSLRAHHVSQISTGLYHTVV 445
             +  +GF     P+  V D    PR L            D  +   +  I+ G +H+++
Sbjct: 378 YDYHQIGFTTKDLPEGTVRDDKGNPRFLPVPSPLSLGGEDDDEKLPKMRFIACGAHHSLI 437

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
           +   GR++ +G +   Q GH        P +I 
Sbjct: 438 IDVDGRVWTWGFSSSFQTGHAEEDDVETPRKIM 470



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 50/263 (19%)

Query: 256 DRPTPKSIAPLEEVGSVVQIAA--GPSYMLAVTGNGV---VYSFGSGSNFCLGHGEQHDE 310
           ++P P + AP     S +Q      P+ +   + N V   V++FG+G    LG G     
Sbjct: 50  EKPIPAAKAPSRLRLSAIQRKHKHSPTLLPLPSINKVDCEVFAFGTGDMCELGLG----- 104

Query: 311 LQPRAIQTFRRKGI------HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH---GDE 361
             P    T +R  +       +V ++ G +H + LDS G V++WG    GALG    G E
Sbjct: 105 --PEKASTVKRPRLSPYLSKEIVDIAVGGQHGLVLDSQGRVWSWGGNDLGALGRDTSGHE 162

Query: 362 IDKTL----------PE--PLSSLKSHLA-----VQVCARKRKTFVLVDTGSVYGFGWM- 403
           + K +          P+  P  S+ + +      V++ A    +  L   G V+ +G   
Sbjct: 163 VLKDMDADESDDEDDPKLNPAESIPALVDTDQRFVKIEASDSLSLALTAEGDVWAWGSFR 222

Query: 404 -GFGSLGFPDRGVSDKVL---RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
              G++GF     SDKV    RP  ++ L   +++ I+ G  H + +T  G +  +GD+E
Sbjct: 223 NSQGTMGF-----SDKVKVQNRPVKIEEL--SNIAAIAAGRDHVLALTQWGTVHTWGDSE 275

Query: 460 RAQLGHDTLRGCLEPTEIFIQEM 482
             +LG  + R  L P E+ ++ +
Sbjct: 276 NFRLGWKSNRSTLSPRELGLKNI 298



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 100/247 (40%), Gaps = 26/247 (10%)

Query: 113 NQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N   I  GR H L ++   +V + G S    LG        +S   +      ++V V A
Sbjct: 248 NIAAIAAGRDHVLALTQWGTVHTWGDSENFRLGW-KSNRSTLSPRELGL---KNIVYVGA 303

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCG--HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
            E H+  +   G+V   G N    CG   +  N  +  P  V+AL G     VT G + +
Sbjct: 304 GEFHSFAIDTDGKVLAWGLNQYGQCGILGQSDNAAVDGPTYVDALDGKDIVAVTGGEHHS 363

Query: 230 GFLTIRGHVHTCGSNTHGQLG-------HGDTLDR---------PTPKSIA---PLEEVG 270
             L+  G V++ G   + Q+G        G   D          P+P S+      E++ 
Sbjct: 364 LALSKDGTVYSFGRYDYHQIGFTTKDLPEGTVRDDKGNPRFLPVPSPLSLGGEDDDEKLP 423

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
            +  IA G  + L +  +G V+++G  S+F  GH E+ D   PR I     K I V    
Sbjct: 424 KMRFIACGAHHSLIIDVDGRVWTWGFSSSFQTGHAEEDDVETPRKIMNTAIKPIDVKMAG 483

Query: 331 AGDEHVV 337
            G +  V
Sbjct: 484 GGGQFSV 490


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 165/374 (44%), Gaps = 20/374 (5%)

Query: 115 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H++ I+ S   FS GS+  G LGHG  T   V+   +        + V+   
Sbjct: 45  ISVACGDQHSVFITASGRTFSFGSNDYGQLGHG-HTKALVNPRCVKALKDKRAILVACGR 103

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +H        +V+  G NS    G + +      P+LV  L GV  K +TAG + +  L+
Sbjct: 104 SHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALS 163

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
            +G V+  GS+ HGQLG G    R  P     L+  G  + I+AG  +   V  +GV+Y+
Sbjct: 164 AKGIVYLWGSSEHGQLGLGRKKQRKLP---VQLKTEGKAIAISAGAYHSAYVNTDGVLYT 220

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWG 349
           FG        HG+    L P+  +   +    +G+ V  V+ G  H VAL   G  Y++G
Sbjct: 221 FGETE-----HGKLGTNLAPKKCRKPSKVPDIQGL-VTSVACGGSHTVALTCDGRAYSFG 274

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
            G  G LG G  +       L  + + + + +V A +  T  L +   +Y  G    G L
Sbjct: 275 DGSQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKL 334

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
              D  +      P ++D L    V Q+S G  HT+V+     + G  D +  ++G   +
Sbjct: 335 ALEDGEMGSNKFSPMLVDILSLFQVQQVSCGGCHTLVLV----VPGLTDPQGNRMGDSPI 390

Query: 469 RGCLEPTEIFIQEM 482
              ++ TE+ +  +
Sbjct: 391 SAAVQATELTLARL 404



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 97/245 (39%), Gaps = 56/245 (22%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-------- 322
           +V+ +A G  + + +T +G  +SFGS     LGHG     + PR ++  + K        
Sbjct: 43  AVISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACG 102

Query: 323 -------------------------------------------GIHVVRVSAGDEHVVAL 339
                                                      G+ V  ++AG +H +AL
Sbjct: 103 RSHTLVATDDKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLAL 162

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
            + G VY WG    G LG G +  + LP  L +    +A+   A     +V  D G +Y 
Sbjct: 163 SAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAY-HSAYVNTD-GVLYT 220

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           FG    G LG        K  +P  +  ++   V+ ++ G  HTV +T  GR + FGD  
Sbjct: 221 FGETEHGKLG--TNLAPKKCRKPSKVPDIQG-LVTSVACGGSHTVALTCDGRAYSFGDGS 277

Query: 460 RAQLG 464
           + QLG
Sbjct: 278 QGQLG 282



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 6/168 (3%)

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
           G+ F  G  +  D L      TF  K   V+ V+ GD+H V + +SG  +++G    G L
Sbjct: 19  GAVFTFGKSKFSDNLPG----TFWVKNDAVISVACGDQHSVFITASGRTFSFGSNDYGQL 74

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           GHG       P  + +LK   A+ V   +  T V  D   VY FG      LG       
Sbjct: 75  GHGHTKALVNPRCVKALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQLGVKSSAAY 134

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                P+++ +L    V  ++ G  H++ ++ +G ++ +G +E  QLG
Sbjct: 135 HA--DPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLG 180


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 140/302 (46%), Gaps = 15/302 (4%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
           V +S  + H A V  +G+++  G N+      G ++T   + +P  V+ALK    K    
Sbjct: 33  VLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNT---VSKPTCVKALKPEKTKLAVC 89

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G N T   T +G+V+  G N+ GQLG GDT +R T   I+       + Q+AAG     A
Sbjct: 90  GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAA 149

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT +G ++ +G  S   +G  ++     P  +      G  V  +S G  H   +   G 
Sbjct: 150 VTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDV----GKPVSSISCGYYHSALITGDGE 205

Query: 345 VYTWGKGYCGALGHGDEIDKT--LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           +YT+G+   G LG   E  K   +P+P+  +   +    C  +  T VL +T  VY FG 
Sbjct: 206 LYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNKVACGGEH-TVVLTET-DVYTFGL 263

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
             +G LG         V  P+ +  LR H +  I+ G  HT VV + G +F FGD    +
Sbjct: 264 GQYGQLGHGTFIFETSV--PKSVKHLRRHKICNITCGENHTAVVAENGLMFTFGDGRHGK 321

Query: 463 LG 464
           LG
Sbjct: 322 LG 323



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 38/259 (14%)

Query: 120 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 177
           GR HTL+ +   +V++ G +  G LG G +T +  +F  I+F +  H + Q++A    +A
Sbjct: 90  GRNHTLVYTEKGNVYAAGGNSEGQLGLG-DTEERSTFHLISFFTNQHKIKQLAAGSYTSA 148

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGLNFT 229
            V + GQ+F  GDNS    G  D           EA   VPC+         ++ G   +
Sbjct: 149 AVTEDGQLFVWGDNSEGQIGLAD-----------EACVSVPCQVDVGKPVSSISCGYYHS 197

Query: 230 GFLTIRGHVHTCGSNTHGQLG------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
             +T  G ++T G   +G+LG        + + +P P  +        V ++A G  + +
Sbjct: 198 ALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIME------KVNKVACGGEHTV 251

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            +T   V Y+FG G    LGHG    E   P++++  RR  I    ++ G+ H   +  +
Sbjct: 252 VLTETDV-YTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKI--CNITCGENHTAVVAEN 308

Query: 343 GYVYTWGKGYCGALGHGDE 361
           G ++T+G G  G LG G+E
Sbjct: 309 GLMFTFGDGRHGKLGLGEE 327


>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
 gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
          Length = 1878

 Score =  110 bits (274), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 94/349 (26%), Positives = 157/349 (44%), Gaps = 35/349 (10%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ---- 181
           L +   +++ G +   VLG G E  +     ++NF SA  V QVS   +H A +++    
Sbjct: 55  LKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGISE 114

Query: 182 -SGQVFTCG----DNSSFCCGHRDTNRPIFRPRLVEA-LKGVPC----------KQVTAG 225
            SG+V+T G        +  GH +      +  L E+    +PC           +++ G
Sbjct: 115 ASGRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISCG 174

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            N +  L+  G V   G   +G LG G+  D  +P  I        V+ IAAG  + L  
Sbjct: 175 ANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCC 234

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
             +G V+++GS SN  LG G  +  +  P  I++  +   H+  V+AG+ H   +DS GY
Sbjct: 235 NEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQ--YHITLVAAGESHSGCIDSFGY 292

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +YTWG G  G LGHG + D  +P  +  + S   VQ+      +  L  +G VY +G   
Sbjct: 293 IYTWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQSGEVYIWGAKQ 352

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
              +  P +           +D+  + H+  I++G Y +  +  R  ++
Sbjct: 353 HEIISLPTK-----------IDAFDS-HICHINSGPYISFAMDVRHNIY 389



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 24/264 (9%)

Query: 235 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-----GN 288
           +G ++  G NT+  LG G +  +   P  +     +  V Q++ G S+   +       +
Sbjct: 58  KGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL-EVFQVSCGYSHTAVLVKGISEAS 116

Query: 289 GVVYSFGSGSNFCLGH-------GEQHDE-------LQPRAIQTFRRKGIHVVRVSAGDE 334
           G VY+ G G    LG+       G +HD+         P            + R+S G  
Sbjct: 117 GRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISCGAN 176

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVD 393
           H +AL  SG V+ WG G  G LG G+  D   P  + +  +   V  + A  R +    +
Sbjct: 177 HSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNE 236

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            G V+ +G    G LG    G       P  + SL  +H++ ++ G  H+  +   G ++
Sbjct: 237 DGQVFAWGSNSNGRLG--TGGSYGMKTVPTQIKSLSQYHITLVAAGESHSGCIDSFGYIY 294

Query: 454 GFGDNERAQLGHDTLRGCLEPTEI 477
            +G+    +LGH T   C  P  I
Sbjct: 295 TWGNGGSGKLGHGTQSDCNIPRRI 318



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 85/396 (21%), Positives = 155/396 (39%), Gaps = 55/396 (13%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G  H+L  + +  VF+ GS+  G LG G         T+I   S  H+  V+A E
Sbjct: 222 LHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAGE 281

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +H+  +   G ++T G+  S   GH  T      PR +E +  +P  Q+T G   +  L+
Sbjct: 282 SHSGCIDSFGYIYTWGNGGSGKLGH-GTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALS 340

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V+  G+  H  +          P  I   +    +  I +GP    A+     +Y 
Sbjct: 341 QSGEVYIWGAKQHEIIS--------LPTKIDAFDS--HICHINSGPYISFAMDVRHNIYL 390

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRK------------------------GIHVVRV 329
           +   +N  L + ++ + L     Q ++R                         G ++V  
Sbjct: 391 W---NNRLLVNSKKSEALNANEEQLYKRMNSKNPVLLPFFQSKAFVDDCIFYMGFNLVDY 447

Query: 330 SAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
             G++      S G +++  + Y   G+   G  +   +P       S    Q+      
Sbjct: 448 K-GNKVSYEPKSEGGLFSVNRIYKSNGSSEIGSLVGSQIP-------SWSVRQIACGTSH 499

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDR------GVSDKVLRPRILDSLRAHHVSQISTGLY 441
           T +LV  G+++ +G   +G LG   R      G  ++       +   +  + +++ G +
Sbjct: 500 TLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEPIRRVACGSW 559

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           H++    +G  F +G  +R QLG   +R   EP  I
Sbjct: 560 HSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGI 595



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 25/213 (11%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---------PIFRPRLVEALKG 216
           V Q++   +H   ++  G +F  GDN     G  DT R           F     E    
Sbjct: 490 VRQIACGTSHTLLLVYGGTIFAWGDNKYGQLG-IDTRRRKSQDGDKNESFLNEPTEIKFS 548

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
            P ++V  G   +    I+G+  + G    GQLG G   +   P  I  L+   +V+++A
Sbjct: 549 EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLK---NVIEVA 605

Query: 277 AGPSYMLAV-----TGNGVVYSFGSGSNFCLGHGEQH-----DELQPRAIQTFRRK--GI 324
            G  Y   +     TGN  + +  SG  +  G G+       D +    I   R    G 
Sbjct: 606 GGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGT 665

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
            +++V+ G  H +AL +SG + TWG GY G LG
Sbjct: 666 PIIKVALGSSHTLALTASGELITWGAGYYGRLG 698



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 28/229 (12%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG---------HGEQHDEL--QPRAIQTF 319
           SV QIA G S+ L +   G ++++G      LG          G++++    +P  I+ F
Sbjct: 489 SVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIK-F 547

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----- 374
                 + RV+ G  H +  D  G  ++WG+G  G LG G   +   P  + +LK     
Sbjct: 548 SEP---IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEV 604

Query: 375 ------SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
                 S   V       K    +++G ++ +G    G LG  D  +   +  PR L+  
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN-- 662

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               + +++ G  HT+ +T  G L  +G     +LG ++ +    P +I
Sbjct: 663 LGTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKI 711



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 87/395 (22%), Positives = 156/395 (39%), Gaps = 62/395 (15%)

Query: 116 QITTGRYHTLL-ISNSSVFSCGSSLCGVLG------HGPETTQCVSF----TRINFPSAA 164
           QI  G  HTLL +   ++F+ G +  G LG         +  +  SF    T I F    
Sbjct: 492 QIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEP- 550

Query: 165 HVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
            + +V+    H+      G  F+ G  D      G     R ++ P  +  LK V   +V
Sbjct: 551 -IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTG---AIRNLYEPAGIVTLKNV--IEV 604

Query: 223 TAGLNFTGFL------------TIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
             G  ++  +            TI  G +   G    G+LG GD + +    +   L   
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLG 664

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
             ++++A G S+ LA+T +G + ++G+G    LG         P  I+ F  KG+ +V +
Sbjct: 665 TPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIR-FPIKGVQIVDI 723

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV----QVCARK 385
           + G  H +A+ S G ++ WGK    A     E D   P   + L+S   +     + A  
Sbjct: 724 AVGSYHSMAVSSLGDLWVWGK----AENVLSEKDVLTPYIFAKLESPSGIPRIYSIHAFG 779

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----------HVS 434
             ++ +  +G ++ +G         P+   ++ +        +++H           +  
Sbjct: 780 DVSYAITQSGVLWIWG---------PENSETENIQGLETSIKIKSHTGRAEMIVLPGNAI 830

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
            +S    H V +   G +  +GD  R +LG   +R
Sbjct: 831 GVSGSTTHHVCLLASGEVVSWGDPSRGKLGQQDIR 865


>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
           latipes]
          Length = 527

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 126/275 (45%), Gaps = 5/275 (1%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 187
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H       G+VF 
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVFA 98

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G+  TN  +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSG 158

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
           Q+G G T ++PTP+ ++   +   VV +  G    +AV  NG +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNN 218

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            ++  P  I     +G++VV+V+ G  H +AL   G+VY WG    G LG G++ ++ LP
Sbjct: 219 GNQQTPCRIAAL--QGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALP 276

Query: 368 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
             +++ K  +  V  C     +     +G V  +G
Sbjct: 277 TLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 118/237 (49%), Gaps = 9/237 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP  ++A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSL-SYGTGPHVVIA-TAD 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V+++G      LG+G  +  L P  + T    G  V  V+ G  H +AL + G V+ W
Sbjct: 94  GEVFAWGHNGYSQLGNGTTNHGLTPALVST-NLLGKRVTEVACGSHHTIALTADGEVFAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G +G G   ++  P  +SS L+S + V V   +  +  ++D G +YG+G+   G 
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYNCNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           LG  + G      R   + +L+  +V Q++ G  HT+ +TD G ++ +G N   QLG
Sbjct: 213 LGLGNNGNQQTPCR---IAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLG 266



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 13/291 (4%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           ++ N A +V  + +VF  G N S C G  D    I  PR ++ L G     ++ G   TG
Sbjct: 29  SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDVLCGKKIVSLSYG---TG 84

Query: 231 ----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
                 T  G V   G N + QLG+G T    TP  ++       V ++A G  + +A+T
Sbjct: 85  PHVVIATADGEVFAWGHNGYSQLGNGTTNHGLTPALVSTNLLGKRVTEVACGSHHTIALT 144

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G V+++G  ++  +G G   ++  PR + +  +  + VV V  G    +A+  +G +Y
Sbjct: 145 ADGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKV-VVNVGCGQLCSMAVLDNGEIY 203

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
            WG    G LG G+  ++  P  +++L+    VQV      T  L D G VY +G   +G
Sbjct: 204 GWGYNCNGQLGLGNNGNQQTPCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYG 263

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFG 456
            LG  ++  S++ L P ++++ +   V   +    HT    T  G++  +G
Sbjct: 264 QLGTGNK--SNQAL-PTLINTDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311


>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Callithrix jacchus]
          Length = 556

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 130/293 (44%), Gaps = 13/293 (4%)

Query: 111 AGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 170
           AGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +S
Sbjct: 59  AGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLS 109

Query: 171 -ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
             S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   +
Sbjct: 110 YGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHS 169

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT  G V   G N  GQ+G G T+++PTP+ +    +   VV IA G    +AV  +G
Sbjct: 170 LVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSG 229

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY WG
Sbjct: 230 EVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 287

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
               G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 288 ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 8/281 (2%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGL-NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 262
           PIF     E L+ +    V  G  N   + T+   +   G+N  G LG GD      P+ 
Sbjct: 37  PIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR 96

Query: 263 IAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
           +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T   
Sbjct: 97  LDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NL 154

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 380
               V+ V+ G  H + L S G V+ WG    G +G G  +++  P  ++  L++ + V 
Sbjct: 155 SNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVT 214

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
           +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G 
Sbjct: 215 IACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACGY 271

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 272 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 118

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 237

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Callithrix jacchus]
          Length = 577

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 130/293 (44%), Gaps = 13/293 (4%)

Query: 111 AGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 170
           AGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +S
Sbjct: 80  AGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACLS 130

Query: 171 -ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
             S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   +
Sbjct: 131 YGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHS 190

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
             LT  G V   G N  GQ+G G T+++PTP+ +    +   VV IA G    +AV  +G
Sbjct: 191 LVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSG 250

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY WG
Sbjct: 251 EVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWG 308

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
               G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 309 ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 361



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 8/281 (2%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGL-NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 262
           PIF     E L+ +    V  G  N   + T+   +   G+N  G LG GD      P+ 
Sbjct: 58  PIFSLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRR 117

Query: 263 IAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
           +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T   
Sbjct: 118 LDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-NL 175

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQ 380
               V+ V+ G  H + L S G V+ WG    G +G G  +++  P  ++  L++ + V 
Sbjct: 176 SNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVT 235

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
           +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G 
Sbjct: 236 IACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACGY 292

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 293 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 333



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 82  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 139

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 140 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 199

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 200 FAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 258

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 259 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 316


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 7/270 (2%)

Query: 101 EHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-I 158
           +    +V   A N + ++ G  HTL +++   V++ G    G LG  P T +C+   R I
Sbjct: 22  QEREQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGL-PGTEECIRVPRNI 80

Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
              S   +VQVS    H+  + +  +VF+ G N     G     +    P+L+++L G+P
Sbjct: 81  KSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIP 140

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
             Q+ AG   +  LT+ G +   G N  GQLG  D  DR  P  +  L     +V I  G
Sbjct: 141 FMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVYICCG 199

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             +  A+T  G V++FG+G    LGH     E+ PR +  F   G  V +V+ G +H  A
Sbjct: 200 EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQHTSA 257

Query: 339 -LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            + SSG +Y++G G  G LG G   ++  P
Sbjct: 258 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 287



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 125/257 (48%), Gaps = 9/257 (3%)

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD-RPTPKSIAPLEEV 269
           V AL       V+ G   T  L  +G V+  G +T GQLG   T +    P++I  L ++
Sbjct: 27  VVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDI 86

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVR 328
             +VQ++ G  + LA++    V+S+G      LG G E   +  P+ I++    GI  ++
Sbjct: 87  -QIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLL--GIPFMQ 143

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 388
           ++AG  H   L  SG ++ WG+   G LG  DE D+ +P  L SL+S   V +C  +  T
Sbjct: 144 IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHT 203

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVT 447
             L   G V+ FG  G+G LG      +   + PR +  L    V+Q++ G  HT   V 
Sbjct: 204 AALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP 260

Query: 448 DRGRLFGFGDNERAQLG 464
             GR++ FG     QLG
Sbjct: 261 SSGRIYSFGLGGNGQLG 277



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 112/210 (53%), Gaps = 7/210 (3%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKGIHVVRV 329
           ++V ++ G ++ LA+   G VY++G  ++  LG  G +     PR I++     I +V+V
Sbjct: 34  NIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSL--SDIQIVQV 91

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVCARKRKT 388
           S G  H +AL     V++WG+   G LG G E  K T P+ + SL     +Q+ A    +
Sbjct: 92  SCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHS 151

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
           FVL  +G+++G+G   FG LG  D   +D+ + P +L SLR+  +  I  G  HT  +T 
Sbjct: 152 FVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDHTAALTK 208

Query: 449 RGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            G +F FG     QLGH++    + P ++F
Sbjct: 209 EGGVFTFGAGGYGQLGHNSTSHEINPRKVF 238



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 109/227 (48%), Gaps = 12/227 (5%)

Query: 94  LRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQC 152
           +R  ++++  SDI        +Q++ G YH+L +S  S VFS G +  G LG G E  + 
Sbjct: 74  IRVPRNIKSLSDI------QIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQ 127

Query: 153 VSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 212
            S   I        +Q++A   H+  +  SG +F  G N     G  D N   + P L++
Sbjct: 128 TSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPNLLK 186

Query: 213 ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV 272
           +L+      +  G + T  LT  G V T G+  +GQLGH  T     P+ +   E +GS+
Sbjct: 187 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSI 244

Query: 273 V-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
           V Q+A G  +  A V  +G +YSFG G N  LG G   +   P  ++
Sbjct: 245 VTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 291



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 2/97 (2%)

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
           E + +L +   V V      T  L D G VY +G    G LG P  G  + +  PR + S
Sbjct: 25  EQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLP--GTEECIRVPRNIKS 82

Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           L    + Q+S G YH++ ++    +F +G N+  QLG
Sbjct: 83  LSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLG 119


>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
 gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
          Length = 1812

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 171/391 (43%), Gaps = 25/391 (6%)

Query: 109  TSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGP--ETTQCVSFTRINFPSAAH 165
            T  G++ ++  G  H+L++ N   ++S G +  G+LG G   + T+ V  T +     + 
Sbjct: 1425 TVTGDKNRMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPV-LTDLTPLGGST 1483

Query: 166  VVQVS----ASENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVP 218
            VV +S    AS + A  +   G+++  G N +   G     D NRP+     + +L    
Sbjct: 1484 VVSISTGSGASRSQA--IDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVD--LASLGSSK 1539

Query: 219  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVG--SVVQI 275
               V AG      L  +  +   G N  GQLG G   +   P  I   LE +   +V  +
Sbjct: 1540 VTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGV 1599

Query: 276  AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
             AG  + + +   G ++ +G      LG G    + +P  +      G  V+ VSAG+ H
Sbjct: 1600 WAGDFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHH 1659

Query: 336  VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE--PLSSLKSHLAVQVCARKRKTFVLVD 393
             VALD  G ++ WG    G LG G   D+  P    L+SL  H  V + A    T  L +
Sbjct: 1660 TVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDE 1719

Query: 394  TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILD--SLRAHHVSQISTGLYHTVVVTDRGR 451
             G ++ +G    G LG    G +    RP  +D   L    V  +S G ++  VV DRG 
Sbjct: 1720 LGRLWAWGPNESGLLG---DGTTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGE 1776

Query: 452  LFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 482
            L+ +G N   QLG  T    L+P  + +  M
Sbjct: 1777 LWAWGSNSYGQLGDGTKTRRLKPVRVDMSAM 1807



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 24/318 (7%)

Query: 132  VFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
            +++ G +  G LG G       P      S        ++ V  V+A   H   +    +
Sbjct: 1505 LWAWGYNFAGALGDGTGIDRNRPVLVDLASL------GSSKVTAVAAGRYHNLVLDDQSR 1558

Query: 185  VFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
            ++  G N     G     +   P+     +E L G     V AG   +  L   G +   
Sbjct: 1559 LWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILDDLGRLWVW 1618

Query: 242  GSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            G N +G+LG G T    RP    + PL     V+ ++AG  + +A+   G ++++G   +
Sbjct: 1619 GKNKYGELGDGTTTYQTRPVLVDLLPLNGR-KVMAVSAGEHHTVALDEQGGLWAWGLNDS 1677

Query: 300  FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
              LG G   D  +P  +      G  VV +SAG  + VALD  G ++ WG    G LG G
Sbjct: 1678 GRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDELGRLWAWGPNESGLLGDG 1737

Query: 360  DEIDKTLP--EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
              I++  P    L+ L     V V A     FV+ D G ++ +G   +G LG    G   
Sbjct: 1738 TTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGELWAWGSNSYGQLG---DGTKT 1794

Query: 418  KVLRPRILDSLRAHHVSQ 435
            + L+P  +D    ++ S+
Sbjct: 1795 RRLKPVRVDMSAMNNTSK 1812



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 14/263 (5%)

Query: 231  FLTIRGHVHTCGSNTHGQLGHGDTLDRPTP--KSIAPLEEVGSVVQIA--AGPSYMLAVT 286
             L  +  + + G N  G LG G   DR  P    + PL    +VV I+  +G S   A+ 
Sbjct: 1442 ILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGG-STVVSISTGSGASRSQAID 1500

Query: 287  GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
              G ++++G      LG G   D  +P  +         V  V+AG  H + LD    ++
Sbjct: 1501 DQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSSKVTAVAAGRYHNLVLDDQSRLW 1560

Query: 347  TWGKGYCGALGHGDEIDKTLPEP----LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
             WG    G LG G   +   P P    L  L       V A    + +L D G ++ +G 
Sbjct: 1561 AWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILDDLGRLWVWGK 1620

Query: 403  MGFGSLGFPDRGVSDKVLRPRILD--SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
              +G LG    G +    RP ++D   L    V  +S G +HTV + ++G L+ +G N+ 
Sbjct: 1621 NKYGELG---DGTTTYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDS 1677

Query: 461  AQLGHDTLRGCLEPTEIFIQEME 483
             +LG  +      P ++ +  ++
Sbjct: 1678 GRLGDGSTTDRHRPVQVDLTSLD 1700



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 8/270 (2%)

Query: 105  DIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSF---TRINF 160
            D+    +     +  GRYH L++ + S +++ G +  G LG G  T           +  
Sbjct: 1531 DLASLGSSKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEP 1590

Query: 161  PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVP 218
             + + V  V A + H+  +   G+++  G N     G   T     RP LV+   L G  
Sbjct: 1591 LAGSTVTGVWAGDFHSIILDDLGRLWVWGKNKYGELGDGTTTYQT-RPVLVDLLPLNGRK 1649

Query: 219  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAA 277
               V+AG + T  L  +G +   G N  G+LG G T DR  P  +      G  VV I+A
Sbjct: 1650 VMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISA 1709

Query: 278  GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
            G    +A+   G ++++G   +  LG G   ++ +P  +      G  VV VSAG  +  
Sbjct: 1710 GGWNTVALDELGRLWAWGPNESGLLGDGTTINQHRPVQVDLTPLNGRKVVAVSAGSFYFF 1769

Query: 338  ALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
             +D  G ++ WG    G LG G +  +  P
Sbjct: 1770 VVDDRGELWAWGSNSYGQLGDGTKTRRLKP 1799


>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
 gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
          Length = 400

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 130/262 (49%), Gaps = 19/262 (7%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYM-LAVTGNGVVYS 293
           + + G    GQ GHGD  D   PK +  L ++G    +VQ+AAG   + L +  +G V S
Sbjct: 4   IASWGVAKRGQCGHGDREDVSEPKLL--LGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLS 61

Query: 294 FGSGSNFCLGHG-----EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           FG+     LGHG     +  D L+PR I   + +   V+ VSAG+ H   + + G VYTW
Sbjct: 62  FGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNE--KVICVSAGELHSGCVTADGDVYTW 119

Query: 349 GKGYCGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           G+G+CG LG GD     LPE   L  L+      +    R T V+ + G V+ +G   +G
Sbjct: 120 GEGFCGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRYG 179

Query: 407 SLGFPDRGVSDKVLR--PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            L   +  + D   +  P+++D+L A     +S G  H++V+ + G L+ FG      LG
Sbjct: 180 VLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGGLYTFGSGASGALG 239

Query: 465 HDTLRGCLEPTEIFIQEMEEDT 486
           H  L G   P ++   + EE+ 
Sbjct: 240 HGDLVGQEFPVKVM--QFEENN 259



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 149/326 (45%), Gaps = 27/326 (8%)

Query: 106 IVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG----PETTQCVSFTRINFP 161
           IV+ +AG       G+   +L  +  V S G++  G LGHG     + + C+    I+  
Sbjct: 39  IVQVAAGG------GQLDLMLKKSGRVLSFGTAQYGALGHGYDAGKQLSDCLRPRYIDAL 92

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE--ALKGVPC 219
               V+ VSA E H+  V   G V+T G+      G  D  RP   P  V    L+    
Sbjct: 93  KNEKVICVSAGELHSGCVTADGDVYTWGEGFCGQLGLGD-RRPHLLPEQVTLGGLEDECV 151

Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPL-EEVGS--VVQI 275
             ++ G   T  +T  G V + G   +G L   + TLD P+ +    L + +G+   V +
Sbjct: 152 SNMSCGCRHTLVVTEEGEVFSWGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGV 211

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
           +AG  + + +  +G +Y+FGSG++  LGHG+   +  P  +  F    + + ++SAG + 
Sbjct: 212 SAGHRHSMVLDEHGGLYTFGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDM 271

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 394
            +A+ ++G VY WGK   G +G G+  D  LP  +    ++   V V      + ++   
Sbjct: 272 SMAVSTTGDVYAWGKAKEGRIGLGNNNDICLPRKVDVGDANFKGVDVECGYVHSLIIGLD 331

Query: 395 GSVYGFGWMGF---------GSLGFP 411
           GSVY  G +G          G  GFP
Sbjct: 332 GSVYQCGGVGVDGKDDGQNTGGDGFP 357


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
           PS +    + A +     +   G V  CG  S    G  D+N      +  F P    ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
           K V   + + G   T   T  G V + G   +G+LGHG++  +  PK I    +   VV 
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           ++AG  +  AVT +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571

Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           H +AL   G  V+++G G  G LGHGD      P+ + +L+     +VCA  + +  L  
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631

Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           TG VY +G    +G GS            LRP++++ L A  +  +S G  H + ++   
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684

Query: 451 RLFGFGDNERAQLGH 465
            ++ +G+N   Q G 
Sbjct: 685 EVYAWGNNSMGQCGQ 699



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVT 527

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 583

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK I  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 584 WSFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        +V VS GD H +AL     VY WG    G  G
Sbjct: 643 --CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCG 698

Query: 358 HGDEIDK-TLPEPLSSLKSHLAVQVCA 383
            G+     T P+ +S L      Q+ A
Sbjct: 699 QGNSTGPITKPKKVSGLDGIAIQQISA 725



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   +F         + AG      + + G V   GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H +++  +  +     T      G V+ +G   +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  VT+ G L+ +G+ +  +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +A  +V VS  ++H   +    +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L G+  +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 58  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACL 108

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 109 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 168

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV  +
Sbjct: 169 SLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDS 228

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 287 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 96  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 153

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  I++ +P  ++  L++ + V
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVV 213

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 214 TIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 270

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 271 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 118

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 179 FAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 237

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
          Length = 1207

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 156/346 (45%), Gaps = 22/346 (6%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           + TG YH+L I+ S +V++ G +    LG   +  +    T +   +A   V  +   + 
Sbjct: 40  VATGYYHSLAITRSGTVYTTGKNDRRQLGRSGDEHKWARVTPLETITA---VAGAVGLDF 96

Query: 176 AAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +  V  +G+V+T G  +      G          PR V+ L       V  G      LT
Sbjct: 97  SVVVDSTGKVYTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALT 156

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V + G    GQLG G  + R +P+ IA L   G VV +AAG +Y LAVTG   VY+
Sbjct: 157 RDGRVFSWGEGADGQLGDGQFVSRHSPEVIADLRGKG-VVSVAAGSTYSLAVTGADQVYA 215

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           FGS S   LG G+     +P  ++     G  V  V+AGD H +A   +G++Y WG    
Sbjct: 216 FGSNSKGQLGVGDTTARFRPTLVRFL--DGKQVCHVTAGDFHTLARTRTGHLYAWGSNQW 273

Query: 354 GALGHGDEIDK-TLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYG--------FGWM 403
           G LG G E D    P  ++  L+    ++V A +R T  L+ T +  G        FG  
Sbjct: 274 GQLGLGSEADSVAAPTEITHILEIGRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGAN 333

Query: 404 GFGSLGF-PDRGVSDK--VLRPRILDSLRAHHVSQISTGLYHTVVV 446
             G LG  PD   S +  +  P  L  + + H  ++  G  HT+++
Sbjct: 334 NTGQLGLDPDHPASKRTQLFHPVRLKRISSMHPIKLIAGGNHTIMI 379



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 8/248 (3%)

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           +T  G V+T G N   QLG     D      + PLE + +V   A G  + + V   G V
Sbjct: 50  ITRSGTVYTTGKNDRRQLGRSG--DEHKWARVTPLETITAVAG-AVGLDFSVVVDSTGKV 106

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG-IHVVRVSAGDEHVVALDSSGYVYTWGK 350
           Y++G G    LG G +  E   R  +  +  G   V+ V+ G  H +AL   G V++WG+
Sbjct: 107 YTWGGGERGQLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGE 166

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G  G LG G  + +  PE ++ L+    V V A    +  +     VY FG    G LG 
Sbjct: 167 GADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGV 226

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
            D   +    RP ++  L    V  ++ G +HT+  T  G L+ +G N+  QLG  +   
Sbjct: 227 GD---TTARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEAD 283

Query: 471 CL-EPTEI 477
            +  PTEI
Sbjct: 284 SVAAPTEI 291



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 111/247 (44%), Gaps = 22/247 (8%)

Query: 238 VHTCGSNTHGQLGHGDTLDR-PTPKSIAP-LEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           V   G+   GQLG GD      T  ++ P LE+   +  +A G  + LA+T +G VY+ G
Sbjct: 3   VAVWGATGAGQLGIGDADGTGKTRVTLVPSLEQ--ELAFVATGYYHSLAITRSGTVYTTG 60

Query: 296 SGSNFCLGH-GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
                 LG  G++H   +   ++T     I  V  + G +  V +DS+G VYTWG G  G
Sbjct: 61  KNDRRQLGRSGDEHKWARVTPLET-----ITAVAGAVGLDFSVVVDSTGKVYTWGGGERG 115

Query: 355 ALGHGDEIDKT---LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG-- 409
            LG G E  +T   +P P+  L +   + V    R    L   G V+ +G    G LG  
Sbjct: 116 QLGLGREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDG 175

Query: 410 -FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
            F  R        P ++  LR   V  ++ G  +++ VT   +++ FG N + QLG    
Sbjct: 176 QFVSRH------SPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDT 229

Query: 469 RGCLEPT 475
                PT
Sbjct: 230 TARFRPT 236


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  109 bits (273), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 21/275 (7%)

Query: 221  QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSIAPLEEVGSVVQIAAG 278
            +V+ G +    +T  G ++T GSN  GQLGHG  +++    PK +        +  +  G
Sbjct: 1126 KVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECG 1185

Query: 279  PSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
              + +AV  N  VYS+GS     LGHG +  ++ +P+ I+    + I  +  +AG  H +
Sbjct: 1186 GEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAI--AAGFAHNI 1243

Query: 338  ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP------LSSLKSHLA---VQVCARKRKT 388
             L  SG ++++G G  G LG G    K +P        +  L+ H      Q+      +
Sbjct: 1244 VLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHS 1303

Query: 389  FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
             +  + G VY +G    G LG     V + + +PR++++LR   V++IS G +HTV  TD
Sbjct: 1304 VICSENGEVYSWGLGKQGQLG---HKVFENISKPRLIETLRG--VTKISCGHFHTVATTD 1358

Query: 449  RGRLFGFGDNERAQLGHDTLRGCLEP--TEIFIQE 481
               ++ +G  E  +LGH + +    P   + FIQ+
Sbjct: 1359 LKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQK 1393



 Score =  109 bits (273), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 64/224 (28%), Positives = 118/224 (52%), Gaps = 10/224 (4%)

Query: 263  IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ-PRAIQTFR 320
            +APL+     ++++ G  ++  +T +G +Y++GS  +  LGHG E +  L  P+ +  FR
Sbjct: 1115 MAPLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFR 1174

Query: 321  RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAV 379
             K   +  V  G EH +A+DS+ +VY+WG    G LGHG + ++++ P+ +  L      
Sbjct: 1175 GKS-PIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQ 1233

Query: 380  QVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPDRGVSDKVLRPRILDSLRAH---HV 433
             + A      VL  +G ++ FG+  FG LG   F  + +  ++    I+  L+ H    +
Sbjct: 1234 AIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKI 1293

Query: 434  SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            +QI+ G  H+V+ ++ G ++ +G  ++ QLGH       +P  I
Sbjct: 1294 TQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLI 1337



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 97/402 (24%), Positives = 169/402 (42%), Gaps = 40/402 (9%)

Query: 115  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSF-TRIN-FPSAAHVVQVSA 171
            ++++ G  H  +I++   +++ GS+  G LGHG E  + +S   R++ F   + +  V  
Sbjct: 1125 IKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVEC 1184

Query: 172  SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
               H   V  +  V++ G +     GH        RP+++E L G   + + AG      
Sbjct: 1185 GGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244

Query: 232  LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA--------PLEEVGSVVQIAAGPSYML 283
            L   G + + G    GQLG G    +  P  I            + G + QIA G  + +
Sbjct: 1245 LKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSV 1304

Query: 284  AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
              + NG VYS+G G    LGH    +  +PR I+T R     V ++S G  H VA     
Sbjct: 1305 ICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLR----GVTKISCGHFHTVATTDLK 1360

Query: 344  YVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRK-TFVLVD-------- 393
             VY+WG G    LGH  + D+++P+ +   ++ +++  VC +    T    D        
Sbjct: 1361 NVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQD 1420

Query: 394  -----------TGSVYGFGWMGFGSLGFPDRGVS---DKVLRPRILDSLRAHHVSQISTG 439
                       +  +Y +G    G LG      S   DK + P  +  + + ++  IS G
Sbjct: 1421 DEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPI-PTAIKGVNSLNLIDISCG 1479

Query: 440  LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
               + ++T    ++ +G     Q+G+        PT I + +
Sbjct: 1480 SDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRISLND 1521



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 71/303 (23%), Positives = 132/303 (43%), Gaps = 44/303 (14%)

Query: 106  IVETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPS- 162
            ++E   G ++Q I  G  H +++  S  +FS G    G LG G   ++ +  TRI   + 
Sbjct: 1223 VIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIP-TRIEINAI 1281

Query: 163  --------AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
                       + Q++    H+    ++G+V++ G       GH+     I +PRL+E L
Sbjct: 1282 MGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHK-VFENISKPRLIETL 1340

Query: 215  KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
            +GV   +++ G   T   T   +V++ GS  H +LGH    D   PK +    +  +V +
Sbjct: 1341 RGV--TKISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQ-KNVSK 1397

Query: 275  IAAGPSYMLAVT---------------------GNGVVYSFGSGSNFCLGHGEQ-----H 308
            +  G ++ + +T                      +  +Y++GS  +  LG G        
Sbjct: 1398 VVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFF 1457

Query: 309  DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
            D+  P AI+      ++++ +S G +    + S+  +Y WG G  G +G+G   D  +P 
Sbjct: 1458 DKPIPTAIKGV--NSLNLIDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPT 1515

Query: 369  PLS 371
             +S
Sbjct: 1516 RIS 1518


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 53  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIASL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +   ++   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 12/258 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           + T+   +   G+N  G LG GD      P+ +  L  +++ S+    +GP  +LA T  
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASL-SYGSGPHIVLATT-E 117

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ W
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAW 176

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G +G G  +++ +P  ++  L++ + V +   +     +VDTG VY +G+ G G 
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG    G      R   L  +R   V +++ G  HT+V+TD G+++ +G N   QLG   
Sbjct: 237 LGLGSSGNQPTPCRVAALQGIR---VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 468 LRGCLEPTEIFIQEMEED 485
                 PT +    ME+D
Sbjct: 294 KSNQSYPTPV---TMEKD 308



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 3/241 (1%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 232
           N   +   + ++F  G N   C G  D    I  PR +++L G     ++ G      L 
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIASLSYGSGPHIVLA 114

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG   
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYNG 233

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG  +
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN 293

Query: 413 R 413
           +
Sbjct: 294 K 294


>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
           carolinensis]
          Length = 530

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 13/256 (5%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  + + S+    +GP  +L+ T +
Sbjct: 35  YITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLESLSGKRIRSL-SYGSGPHVVLS-TED 92

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FRRKGIHVVRVSAGDEHVVALDSSGYVY 346
           G VY++G      LG+G  +  + P  + T    +K   V+ V+ G  H +AL S G VY
Sbjct: 93  GEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKK---VIEVACGSHHSLALSSDGDVY 149

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
            WG   CG +G G   ++  P  +S+ L++ + V +   +  +  +VD G VYG+G+ G 
Sbjct: 150 AWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGN 209

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G LG  + G     L P  + +L+   + QI+ G  HT+ +TD G ++ +G N   QLG 
Sbjct: 210 GQLGLGNNG---NQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLGT 266

Query: 466 DTLRGCLEPTEIFIQE 481
                 L P +I +++
Sbjct: 267 GNKSNQLSPGQILMEK 282



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 3/239 (1%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S N A ++  + +VF  G N S C G  D N+    P+ +E+L G   + ++ G      
Sbjct: 29  SANEAIYITHNDEVFVFGLNCSNCLGTGD-NQSTIVPKKLESLSGKRIRSLSYGSGPHVV 87

Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+   G V+  G N + QLG+G T    TP  +     +  V+++A G  + LA++ +G 
Sbjct: 88  LSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGD 147

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY++G  +   +G G   ++  PR +    +  I VV ++ G    VA+  +G VY WG 
Sbjct: 148 VYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKI-VVSIACGQTSSVAIVDNGEVYGWGY 206

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
              G LG G+  ++  P  +++L+    +Q+      T  L D G +Y +G   +G LG
Sbjct: 207 NGNGQLGLGNNGNQLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLG 265



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 129/286 (45%), Gaps = 5/286 (1%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
           T+      +  N  VF  G +    LG G   +  V   ++   S   +  +S  S  H 
Sbjct: 28  TSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVP-KKLESLSGKRIRSLSYGSGPHV 86

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
               + G+V+  G N     G+  TN+ +   ++   L      +V  G + +  L+  G
Sbjct: 87  VLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDG 146

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V+  G N  GQ+G G T ++PTP+ ++   +   VV IA G +  +A+  NG VY +G 
Sbjct: 147 DVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGY 206

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             N  LG G   ++L P  +     +G+ +++++ G  H +AL   G +Y+WG    G L
Sbjct: 207 NGNGQLGLGNNGNQLTPCRVAAL--QGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQL 264

Query: 357 GHGDEIDKTLP-EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G G++ ++  P + L   +  + +  C     +     +G VY +G
Sbjct: 265 GTGNKSNQLSPGQILMEKERVVEIAACHSAHTSAAKTQSGLVYMWG 310



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 6/184 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H+L L S+  V++ G + CG +G G    Q       N      VV ++  +
Sbjct: 130 IEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQ 189

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  ++ +G+V+  G N +   G  +    +  P  V AL+GV   Q+  G   T  LT
Sbjct: 190 TSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQL-TPCRVAALQGVCIMQIACGYAHTLALT 248

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 291
             G +++ G+NT+GQLG G+  ++ +P  I  L E   VV+IAA  S     A T +G+V
Sbjct: 249 DEGLMYSWGANTYGQLGTGNKSNQLSPGQI--LMEKERVVEIAACHSAHTSAAKTQSGLV 306

Query: 292 YSFG 295
           Y +G
Sbjct: 307 YMWG 310


>gi|449274807|gb|EMC83885.1| Serine/threonine-protein kinase Nek9, partial [Columba livia]
          Length = 878

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++A+K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 263 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPK 322

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + +T  G VY+FGS    C+G  + +  + L+P  +  F
Sbjct: 323 HVEKLQG-KAIHQVSCGDDFTVCITDEGQVYAFGSDYYGCIGVDKAYGSEVLEPLQLDFF 381

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HV  L  +  VYTWG G  G LG   E D   P+ +   K+   V
Sbjct: 382 LTNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIV 439

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 429
            V      TF+L  TG V   G   F  LG      G+ +              +   L 
Sbjct: 440 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 499

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 500 FYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLG 534



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 131/307 (42%), Gaps = 40/307 (13%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ I++   V++ GS   G +G    +G E  + +   +++F     V QVS
Sbjct: 334 QVSCGDDFTVCITDEGQVYAFGSDYYGCIGVDKAYGSEVLEPL---QLDFFLTNPVEQVS 390

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
             +NH A + ++ +V+T G      CG       D+    + P+ V+  K +    V  G
Sbjct: 391 CGDNHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCG 444

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 273
            + T  LT  G V  CG N   +LG          H    + P   S+   +++    + 
Sbjct: 445 CDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIR 504

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            I+ G ++  ++   G + +FGS     LG G+    L    +      G  V+RVS GD
Sbjct: 505 TISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLGG-PLGGKQVIRVSCGD 563

Query: 334 EHVVALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 564 EFTIAATDDNHIFAWGNGGNGRLAMTSTERAHGSDICTSWPRPIFGSLHHVPDLSC-RGW 622

Query: 387 KTFVLVD 393
            T ++V+
Sbjct: 623 HTIIVVE 629



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD      P+ +  L+ 
Sbjct: 270 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQG 329

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G VY FG   +G +G  D+    +VL P  LD    + V Q
Sbjct: 330 KAIHQVSCGDDFTVCITDEGQVYAFGSDYYGCIGV-DKAYGSEVLEPLQLDFFLTNPVEQ 388

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 389 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDV 432



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 133/341 (39%), Gaps = 40/341 (11%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVV--------QVSASENHAAFVLQSGQVFT 187
           G+ L G LGHG          R ++    HV         QVS  ++    +   GQV+ 
Sbjct: 303 GTKLHGQLGHG---------DRASYRQPKHVEKLQGKAIHQVSCGDDFTVCITDEGQVYA 353

Query: 188 CGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
            G +   C G  +     +  P  ++     P +QV+ G N    LT    V+T G   +
Sbjct: 354 FGSDYYGCIGVDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEY 413

Query: 247 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS------GSNF 300
           G+LG     D  TP+ +  + +  ++V +  G      +T  G V + G       G N 
Sbjct: 414 GRLGLDSEEDHYTPQKVD-VPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQ 472

Query: 301 CLGHGEQHDEL--QPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYTWGKGYCGA 355
           C      HD     P A      K +   ++   S G  H  ++D  G + T+G   CG 
Sbjct: 473 CTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQ 532

Query: 356 LGHGDEIDKTLPEPL--SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP-- 411
           LG GD   K L   L    L     ++V      T    D   ++ +G  G G L     
Sbjct: 533 LGVGD-YKKHLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTST 591

Query: 412 DRGVSDKVLR--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 449
           +R     +    PR I  SL  HHV  +S   +HT++V ++
Sbjct: 592 ERAHGSDICTSWPRPIFGSL--HHVPDLSCRGWHTIIVVEK 630


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 53  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV  +
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDS 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  I++ +P  ++  L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVV 208

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VD+G VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 209 TIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 113

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  SG VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDSGEVYVWGYN 232

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 141/303 (46%), Gaps = 26/303 (8%)

Query: 174 NHAAFVLQS-GQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEALKGVPCKQVTAGL 226
            +  FV+ S G V  CG  S    G  D+N      +  F P    A+K V   + + G 
Sbjct: 422 QYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RAIKKVSSSKGSDG- 478

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
             T   T  G V + G   +G+LGHG++  +  PK I    +   VV ++AG  +  AV+
Sbjct: 479 -HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVS 537

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY-V 345
            +G +Y++G G    LGHG+ +     R I T  +   +V  VS G  H +AL   G  V
Sbjct: 538 EDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSSHTIALSKDGRTV 593

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG---W 402
           +++G G  G LGHGD      P+ + +L+     +VCA  + +  L  TG VY +G    
Sbjct: 594 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 653

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
           +G GS            LRP++++ L    V  IS G  H + ++    ++ +G+N   Q
Sbjct: 654 LGCGS-------SEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQ 706

Query: 463 LGH 465
            G 
Sbjct: 707 CGQ 709



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 121/243 (49%), Gaps = 15/243 (6%)

Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ-VSASENHAAFVL 180
           HTL   +   VFS G    G LGHG  +TQ      I  P    VV  VSA   H+A V 
Sbjct: 479 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYP-KLIQGPLQGKVVVCVSAGYRHSAAVS 537

Query: 181 QSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           + G+++T G+      GH D+N R I  P LV+ +  V   +V+ G + T  L+  G  V
Sbjct: 538 EDGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTV 593

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            + G   +G+LGHGDT     PK +  L+ +  + ++ AG    LA+T  G VY++G G+
Sbjct: 594 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA 652

Query: 299 NFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
             CLG G  +   L+P+ I+        VV +S GD H +AL     VY WG    G  G
Sbjct: 653 --CLGCGSSEATALRPKLIEEL--ATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCG 708

Query: 358 HGD 360
            G+
Sbjct: 709 QGN 711



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 13/180 (7%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY +GS S+  L  G Q   LQP+   TF         + AG      + S G V   GK
Sbjct: 384 VYVWGSNSSHQLVEGTQEKILQPKLAATF----ADAQTIEAGQYCTFVISSDGSVRACGK 439

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
           G  G LG GD  +++  + L + + H A++  +  +     T      G V+ +G   +G
Sbjct: 440 GSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 498

Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G S     P+++   L+   V  +S G  H+  V++ G L+ +G+ +  +LGH
Sbjct: 499 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGH 555



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L S   V++ G   C  LG G      +    I   +   VV +S  ++H   +    +V
Sbjct: 639 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEV 696

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +  G+NS   CG  ++  PI +P+ V  L GV  +Q++AG
Sbjct: 697 YAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVAIQQISAG 736


>gi|326920825|ref|XP_003206668.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Meleagris
           gallopavo]
          Length = 905

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++A+K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 290 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPK 349

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + +T  G +Y+FGS    C+G  + +  + L+P  +  F
Sbjct: 350 HVEKLQG-KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFF 408

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HV  L  +  VYTWG G  G LG   E D   P+ +   K+   V
Sbjct: 409 LTNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHCTPQKVDVPKTLNIV 466

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 429
            V      TF+L  TG V   G   F  LG      G+ +              +   L 
Sbjct: 467 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 526

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 527 FYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLG 561



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 40/307 (13%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ I++   +++ GS   G +G    +G E  + +   +++F     V QVS
Sbjct: 361 QVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPL---QLDFFLTNPVEQVS 417

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
             +NH A + ++ +V+T G      CG       D+      P+ V+  K +    V  G
Sbjct: 418 CGDNHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHCTPQKVDVPKTLNIVSVHCG 471

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 273
            + T  LT  G V  CG N   +LG          H    + P   S+   +++    + 
Sbjct: 472 CDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIR 531

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            I+ G ++  ++   G + +FGS     LG G+    L    +      G  V+RVS GD
Sbjct: 532 TISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAG-PLGGKQVIRVSCGD 590

Query: 334 EHVVALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 591 EFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFGSLHHVPDLSC-RGW 649

Query: 387 KTFVLVD 393
            T ++V+
Sbjct: 650 HTIIIVE 656



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD      P+ +  L+ 
Sbjct: 297 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQG 356

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  LD    + V Q
Sbjct: 357 KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGI-DKAYGSEVLEPLQLDFFLTNPVEQ 415

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 416 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHCTPQKVDV 459



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 133/343 (38%), Gaps = 44/343 (12%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVV--------QVSASENHAAFVLQSGQVFT 187
           G+ L G LGHG          R ++    HV         QVS  ++    +   GQ++ 
Sbjct: 330 GTKLHGQLGHG---------DRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYA 380

Query: 188 CGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
            G +   C G  +     +  P  ++     P +QV+ G N    LT    V+T G   +
Sbjct: 381 FGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEY 440

Query: 247 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS------GSNF 300
           G+LG     D  TP+ +  + +  ++V +  G      +T  G V + G       G N 
Sbjct: 441 GRLGLDSEEDHCTPQKVD-VPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQ 499

Query: 301 CLGHGEQHDEL--QPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYTWGKGYCGA 355
           C      HD     P A      K +   ++   S G  H  ++D  G + T+G   CG 
Sbjct: 500 CTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQ 559

Query: 356 LGHGDEID----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
           LG GD         L  PL   +    ++V      T    D   ++ +G  G G L   
Sbjct: 560 LGVGDYKKHLGINLLAGPLGGKQ---VIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMT 616

Query: 412 --DRGVSDKVLR--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 449
             +R     +    PR I  SL  HHV  +S   +HT+++ ++
Sbjct: 617 PTERAHGSDICTSWPRPIFGSL--HHVPDLSCRGWHTIIIVEK 657



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 40/204 (19%)

Query: 299 NFCLGHGEQH----DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS- 342
           N CL    +     DEL  + + + RR+ +              R S  +E  +A+ +S 
Sbjct: 217 NSCLDQDPEKRPTADELLEQPLLSKRRREMEEKVTLLNGPNKRPRSSTVNEAPIAVVTSR 276

Query: 343 -GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGF 400
              VY WG G            K+ P+ L ++KS   A QVCA      V+     +Y +
Sbjct: 277 TSEVYVWGGG------------KSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTW 324

Query: 401 -----GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
                G    G LG  DR       +P+ ++ L+   + Q+S G   TV +TD G+L+ F
Sbjct: 325 VNMQGGTKLHGQLGHGDRA---SYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAF 381

Query: 456 GDNERAQLGHDTLRG--CLEPTEI 477
           G +    +G D   G   LEP ++
Sbjct: 382 GSDYYGCIGIDKAYGSEVLEPLQL 405


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 11/282 (3%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           PIF     E LK +    V    N   +LT    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI 67

Query: 264 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FR 320
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 379
           +K I    V+ G  H + L   G VY WG    G +G G   ++ +P  ++S L++   +
Sbjct: 127 KKAI---SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +VD G VY +G+ G G LG    G      R   L  +R   V Q+  G
Sbjct: 184 GIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VEQVVCG 240

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+ +TD G ++ +G N   QLG         P ++ + +
Sbjct: 241 YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDK 282



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 5/278 (1%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 184
           L  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTG-DAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYN 154

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   +  QP   +    +GI V +V  G  H +AL   G +Y WG    G LG G++ ++
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQ 272

Query: 365 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
           + P  +   K  +  +  C     +     +G VY +G
Sbjct: 273 SYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 14/267 (5%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 232
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYLTKNDEVFVMGTNSSGCLGTGDA-QSIIEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V++ G N + QLG+G T    +P  ++        + +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVY 149

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--- 409
            G LG G   ++  P  +++L+     QV      T  L D G +Y +G   +G LG   
Sbjct: 209 NGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGN 268

Query: 410 -----FPDRGVSDKVLRPRILDSLRAH 431
                +P + + DK    RI++    H
Sbjct: 269 KSNQSYPVQVIVDK---ERIVEIAACH 292


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 153/347 (44%), Gaps = 26/347 (7%)

Query: 117 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 176
           +T G +H++L +   VF  G    G LG   E  Q   +     P    V   SA   H 
Sbjct: 91  VTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVN---PRIKRVQMASAGGLHN 147

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
             + + G V+T G  +    GH    R +  PRL+E         V+AG + T  +T  G
Sbjct: 148 IALTEVGNVYTWGYGAFGALGHGSYERELL-PRLLEGPWKDRIVHVSAGGSHTAAVTESG 206

Query: 237 HVHTCGSNT-HGQLGHGD-------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            ++T G +   G+LGHG+        L RPT   +  L+    +  +  G  + +A+T +
Sbjct: 207 ELYTWGRDEGEGRLGHGNPDIMDEGALSRPT--KVQALDV--PIALVYCGGFFTMALTKS 262

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G ++S+G  +N  LGHG + +  +P+ +     + + +V+V+ G  H  AL   G V TW
Sbjct: 263 GQLWSWGGNANHELGHGTRANNWKPKVVAAL--EDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G G  G LGHG   +   P  + ++       +      T  + + G +Y +G      L
Sbjct: 321 GYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQL 380

Query: 409 GFPDRGVSDKVLRPRILDSLRAHH------VSQISTGLYHTVVVTDR 449
           G P  G+ D+ L P ++   +A H      V  +S G  H V +  R
Sbjct: 381 GIP--GLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 18/271 (6%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           VT GL F   L     V   G    G+LG     ++  P  + P   +  V   +AG  +
Sbjct: 91  VTCGL-FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKP-YVNP--RIKRVQMASAGGLH 146

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            +A+T  G VY++G G+   LGHG    EL PR ++   +    +V VSAG  H  A+  
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHTAAVTE 204

Query: 342 SGYVYTWGKGYC-GALGHG-----DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
           SG +YTWG+    G LGHG     DE   + P  + +L   +A+  C     T  L  +G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCG-GFFTMALTKSG 263

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            ++ +G      LG    G      +P+++ +L    + Q++ G +H   +T  G++  +
Sbjct: 264 QLWSWGGNANHELG---HGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 456 GDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 486
           G     QLGH TL    EP    ++ M + T
Sbjct: 321 GYGGNGQLGHGTLENGKEPA--IVEAMADKT 349



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 154/384 (40%), Gaps = 42/384 (10%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG- 189
            V++ G    G +GHG E T+ +         AA            A         TCG 
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95

Query: 190 -------DNSSFCCGHRDTNR-----------PIFRPRLVEALKGVPCKQVTAGLNFTGF 231
                  +   F  G  D  R           P   PR+         +  +AG      
Sbjct: 96  FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR------VQMASAGGLHNIA 149

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGV 290
           LT  G+V+T G    G LGHG       P+ +  P ++   +V ++AG S+  AVT +G 
Sbjct: 150 LTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHTAAVTESGE 207

Query: 291 VYSFGSGSNFC-LGHGEQH--DE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +Y++G       LGHG     DE    +P  +Q      + +  V  G    +AL  SG 
Sbjct: 208 LYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD---VPIALVYCGGFFTMALTKSGQ 264

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +++WG      LGHG   +   P+ +++L+    VQV         L   G V  +G+ G
Sbjct: 265 LWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGG 324

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG    G  +    P I++++     + I+ G   T  +T+ G L+ +G N   QLG
Sbjct: 325 NGQLG---HGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLG 381

Query: 465 HDTLRG-CLEPTEI-FIQEMEEDT 486
              L+   L+P  + F Q + E T
Sbjct: 382 IPGLKDEQLDPVLVQFPQALHEKT 405



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 31/179 (17%)

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
           R++Q  RR G    RVS+G+   +       V+ WG+G  G +GHG E  + LP  +S+L
Sbjct: 13  RSLQR-RRIGYLADRVSSGEPAELE------VWAWGRGTHGQVGHGSEDTEKLPVLISTL 65

Query: 374 K-------SHLAVQVCARKRKTFVLVDTG----------SVYGFGWMGFGSLGFPDRGVS 416
           K       + +  ++ A+ R   V V  G           V+ +G    G LG       
Sbjct: 66  KLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQ 125

Query: 417 DK-VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            K  + PRI        V   S G  H + +T+ G ++ +G      LGH +    L P
Sbjct: 126 YKPYVNPRI------KRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP 178


>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
           vitripennis]
          Length = 533

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 128/284 (45%), Gaps = 9/284 (3%)

Query: 202 NRPIFRPRLVEALKGVPCKQVTAGL-NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           N PIF     + +  +    V   L N    +T  G V+  GSNT G LG GD+     P
Sbjct: 8   NWPIFSLLEPKFISTIHMAVVYGNLGNEALIVTKDGDVYALGSNTAGCLGTGDSHSTLHP 67

Query: 261 KSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           K +  L   G       +GP ++LA+T  G +YS+G      LG+G  +  L P      
Sbjct: 68  KKVEALCGKGIKTFAYGSGP-HVLALTNKGEIYSWGHNGYCELGNGSTNQGLTPTLCLNL 126

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLA 378
             K   V  ++ G  H VAL   G VY+WG+  CG +  G   ++  P  + S+L   + 
Sbjct: 127 NEK--VVTAIACGSHHSVALTEDGEVYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKVV 184

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
           V +   +  +  + D G V+G+G+ G G LG    G     L P  +  L    + +++ 
Sbjct: 185 VSIACGQTSSMAVTDVGEVFGWGYNGVGQLGI---GNYVNQLSPCKVTGLNGIVIEKVAC 241

Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 482
           G  HT+ ++D G L+ +G N   QLG         P ++ + EM
Sbjct: 242 GYAHTLALSDEGALYVWGGNGFGQLGLGNKANACTPIKLNVTEM 285



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 145/308 (47%), Gaps = 12/308 (3%)

Query: 154 SFTRINFPSAAHVVQVSAS-ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE 212
           S     F S  H+  V  +  N A  V + G V+  G N++ C G  D++  +  P+ VE
Sbjct: 13  SLLEPKFISTIHMAVVYGNLGNEALIVTKDGDVYALGSNTAGCLGTGDSHSTL-HPKKVE 71

Query: 213 AL--KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           AL  KG+      +G +    LT +G +++ G N + +LG+G T    TP     L E  
Sbjct: 72  ALCGKGIKTFAYGSGPHVLA-LTNKGEIYSWGHNGYCELGNGSTNQGLTPTLCLNLNE-K 129

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
            V  IA G  + +A+T +G VYS+G  +   +  G   ++  PR + +    G  VV ++
Sbjct: 130 VVTAIACGSHHSVALTEDGEVYSWGQNNCGQVSSGISSNQGAPRKVNS-ALTGKVVVSIA 188

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
            G    +A+   G V+ WG    G LG G+ +++  P  ++ L   +  +V      T  
Sbjct: 189 CGQTSSMAVTDVGEVFGWGYNGVGQLGIGNYVNQLSPCKVTGLNGIVIEKVACGYAHTLA 248

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH--TVVVTD 448
           L D G++Y +G  GFG LG  ++        P  L+      +S I+T  Y+  +V +  
Sbjct: 249 LSDEGALYVWGGNGFGQLGLGNKA---NACTPIKLNVTEMGRISDIATLHYNHISVAMGQ 305

Query: 449 RGRLFGFG 456
            G+++ +G
Sbjct: 306 GGKIYMWG 313


>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
 gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
          Length = 1878

 Score =  108 bits (271), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 95/357 (26%), Positives = 155/357 (43%), Gaps = 51/357 (14%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ---- 181
           L +   +++ G +   VLG G E  +     ++NF SA  V QVS   +H A +++    
Sbjct: 55  LKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSALEVFQVSCGYSHTAVLVKGISE 114

Query: 182 -SGQVFTCGDNSSFCCGH-------------RDTNRPIFRPRLVEALKGVPC-------- 219
            SG+V+T G       G+              D N   + P        VPC        
Sbjct: 115 ASGRVYTMGLGDRGRLGYTRGYTEFGNEHDKNDLNESWYTP--------VPCIVNFPFNA 166

Query: 220 --KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
              +++ G N +  L+  G V   G   +G LG G+  D  +P  I        V+ IAA
Sbjct: 167 KISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAA 226

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD-ELQPRAIQTFRRKGIHVVRVSAGDEHV 336
           G  + L    +G V+++GS SN  LG G  +  +  P  I++  +   H+  V+AG+ H 
Sbjct: 227 GARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQ--YHITLVAAGESHS 284

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
             +DS GY+YTWG G  G LGHG + D  +P  +  + S   VQ+      +  L  +G 
Sbjct: 285 GCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALSQSGE 344

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
           VY +G      +  P +           +D+  + H+  I++G Y +  +  R  ++
Sbjct: 345 VYIWGAKQHEIISLPTK-----------IDAFDS-HICHINSGPYISFAMDVRHNIY 389



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 24/264 (9%)

Query: 235 RGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT-----GN 288
           +G ++  G NT+  LG G +  +   P  +     +  V Q++ G S+   +       +
Sbjct: 58  KGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL-EVFQVSCGYSHTAVLVKGISEAS 116

Query: 289 GVVYSFGSGSNFCLGH-------GEQHDE-------LQPRAIQTFRRKGIHVVRVSAGDE 334
           G VY+ G G    LG+       G +HD+         P            + R+S G  
Sbjct: 117 GRVYTMGLGDRGRLGYTRGYTEFGNEHDKNDLNESWYTPVPCIVNFPFNAKISRISCGAN 176

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVD 393
           H +AL  SG V+ WG G  G LG G+  D   P  + +  +   V  + A  R +    +
Sbjct: 177 HSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHSLCCNE 236

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            G V+ +G    G LG    G       P  + SL  +H++ ++ G  H+  +   G ++
Sbjct: 237 DGQVFAWGSNSNGRLG--TGGSYGMKTVPTQIKSLSQYHITLVAAGESHSGCIDSFGYIY 294

Query: 454 GFGDNERAQLGHDTLRGCLEPTEI 477
            +G+    +LGH T   C  P  I
Sbjct: 295 TWGNGGSGKLGHGTQSDCNIPRRI 318



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 85/396 (21%), Positives = 155/396 (39%), Gaps = 55/396 (13%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + I  G  H+L  + +  VF+ GS+  G LG G         T+I   S  H+  V+A E
Sbjct: 222 LHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAGE 281

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +H+  +   G ++T G+  S   GH  T      PR +E +  +P  Q+T G   +  L+
Sbjct: 282 SHSGCIDSFGYIYTWGNGGSGKLGH-GTQSDCNIPRRIEGISSLPFVQLTLGAFNSMALS 340

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V+  G+  H  +          P  I   +    +  I +GP    A+     +Y 
Sbjct: 341 QSGEVYIWGAKQHEIIS--------LPTKIDAFDS--HICHINSGPYISFAMDVRHNIYL 390

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRK------------------------GIHVVRV 329
           +   +N  L + ++ + L     Q ++R                         G ++V  
Sbjct: 391 W---NNRLLVNSKKSEALNASEEQLYKRMNSKNPVLLPFFQSKAFVDDCIFYMGFNLVDY 447

Query: 330 SAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
             G++      S G +++  + Y   G+   G  +   +P       S    Q+      
Sbjct: 448 K-GNKVSYEPKSEGGLFSVNRIYKSNGSSEIGSLVGSQIP-------SWSVRQIACGTSH 499

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDR------GVSDKVLRPRILDSLRAHHVSQISTGLY 441
           T +LV  G+++ +G   +G LG   R      G  ++       +   +  + +++ G +
Sbjct: 500 TLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKFSEPIRRVACGSW 559

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           H++    +G  F +G  +R QLG   +R   EP  I
Sbjct: 560 HSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGI 595



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 25/213 (11%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNR---------PIFRPRLVEALKG 216
           V Q++   +H   ++  G +F  GDN     G  DT R           F     E    
Sbjct: 490 VRQIACGTSHTLLLVYGGTIFAWGDNKYGQLG-VDTRRRKSQNGDKNESFLNEPTEIKFS 548

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
            P ++V  G   +    I+G+  + G    GQLG G   +   P  I  L+   +V+++A
Sbjct: 549 EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLK---NVIEVA 605

Query: 277 AGPSYMLAV-----TGNGVVYSFGSGSNFCLGHGEQH-----DELQPRAIQTFRRK--GI 324
            G  Y   +     TGN  + +  SG  +  G G+       D +    I   R    G 
Sbjct: 606 GGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGT 665

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
            +++V+ G  H + L +SG + TWG GY G LG
Sbjct: 666 PIIKVALGSSHTLVLTASGELITWGAGYYGRLG 698



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 28/229 (12%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG---------HGEQHDEL--QPRAIQTF 319
           SV QIA G S+ L +   G ++++G      LG         +G++++    +P  I+ F
Sbjct: 489 SVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIK-F 547

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----- 374
                 + RV+ G  H +  D  G  ++WG+G  G LG G   +   P  + +LK     
Sbjct: 548 SEP---IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEV 604

Query: 375 ------SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
                 S   V       K    +++G ++ +G    G LG  D  +   +  PR L+  
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLN-- 662

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
               + +++ G  HT+V+T  G L  +G     +LG ++ +    P +I
Sbjct: 663 LGTPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKI 711



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 87/395 (22%), Positives = 154/395 (38%), Gaps = 62/395 (15%)

Query: 116 QITTGRYHTLL-ISNSSVFSCGSSLCGVLG------HGPETTQCVSF----TRINFPSAA 164
           QI  G  HTLL +   ++F+ G +  G LG            +  SF    T I F    
Sbjct: 492 QIACGTSHTLLLVYGGTIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKFSEP- 550

Query: 165 HVVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
            + +V+    H+      G  F+ G  D      G     R ++ P  +  LK V   +V
Sbjct: 551 -IRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTG---AIRNLYEPAGIVTLKNV--IEV 604

Query: 223 TAGLNFTGFL------------TIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
             G  ++  +            TI  G +   G    G+LG GD + +    +   L   
Sbjct: 605 AGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLG 664

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
             ++++A G S+ L +T +G + ++G+G    LG         P  I+ F  KG+ +V +
Sbjct: 665 TPIIKVALGSSHTLVLTASGELITWGAGYYGRLGTNSTKSHSNPIKIR-FPIKGVQIVDI 723

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV----QVCARK 385
           + G  H +A+ S G ++ WGK    A     E D   P   + L+S   V     + A  
Sbjct: 724 AVGSYHSMAVSSLGDLWVWGK----AENVLSEKDVLTPYIFAKLESPSGVPRIYSIHAFG 779

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----------HVS 434
             ++ +  +G ++ +G         P+   ++ +        +++H           +  
Sbjct: 780 DVSYAITQSGVLWIWG---------PENSETENIQGLESSIKIKSHTGRAEMILLPGNAI 830

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
            +S    H V +   G +  +GD  R +LG   +R
Sbjct: 831 GVSGSTTHHVCLLASGEVVSWGDPSRGKLGQQDIR 865


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 11/282 (3%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           PIF     E LK +    V    N   +LT    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRI 67

Query: 264 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT--FR 320
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 379
           +K I    V+ G  H + L   G VY WG    G +G G   ++ +P  ++S L++   +
Sbjct: 127 KKAI---SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +VD G VY +G+ G G LG    G      R   L  +R   V Q+  G
Sbjct: 184 GIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VEQVVCG 240

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+ +TD G ++ +G N   QLG         P ++ + +
Sbjct: 241 YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDK 282



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 5/278 (1%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 184
           L  N  VF  G++  G LG G +    +   RI+  S   +V +S  S  H   V   G+
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTG-DAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGE 94

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V++ G N+    G+  TN+ +   ++   L       V  G + +  LT  G V+  G N
Sbjct: 95  VYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYN 154

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
             GQ+G G T ++P P+ +    +  +V+ IA G    +AV  NG VY++G   N  LG 
Sbjct: 155 NSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGL 214

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   +  QP   +    +GI V +V  G  H +AL   G +Y WG    G LG G++ ++
Sbjct: 215 GSSGN--QPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQ 272

Query: 365 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
           + P  +   K  +  +  C     +     +G VY +G
Sbjct: 273 SYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 14/267 (5%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 232
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYLTKNDEVFVMGTNSSGCLGTGDA-QSILEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V++ G N + QLG+G T    +P  ++        + +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVY 149

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--- 409
            G LG G   ++  P  +++L+     QV      T  L D G +Y +G   +G LG   
Sbjct: 209 NGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGN 268

Query: 410 -----FPDRGVSDKVLRPRILDSLRAH 431
                +P + + DK    RI++    H
Sbjct: 269 KSNQSYPVQVIVDK---ERIVEIAACH 292


>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 985

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 111/206 (53%), Gaps = 4/206 (1%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+Q++  + H+  +   GQ+F  G+N+    G R     I  P+ +++L G+P  Q++AG
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            N +  L++ G V   GSN+ GQLG GDT DR  P  +  L      V I+ G  +   +
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSG-KKTVSISCGGEHTATL 238

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS-SGY 344
           +  G V++FGSG    LGH    DE  PR +      G  V +V+ G  H + L + +  
Sbjct: 239 SKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW--GSKVSQVTCGRHHTLVLVALTNR 296

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPL 370
           +Y++G G  G LG+G+++ +++P P+
Sbjct: 297 IYSFGCGMQGQLGNGEQVKQSVPLPV 322



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 7/197 (3%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRV 329
            V+QIA G  + +A++ +G ++ +G  ++  LG  ++   +Q P+ +Q+    GI V ++
Sbjct: 119 KVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC--GIPVAQI 176

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           SAG  H   L  SG V+ WG    G LG GD  D+ +P  + SL     V +      T 
Sbjct: 177 SAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTA 236

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTD 448
            L   G+V+ FG  GFG LG     + D+   PR++  L    VSQ++ G +HT V+V  
Sbjct: 237 TLSKGGTVFTFGSGGFGQLG--HNSLKDE-HHPRLVAELWGSKVSQVTCGRHHTLVLVAL 293

Query: 449 RGRLFGFGDNERAQLGH 465
             R++ FG   + QLG+
Sbjct: 294 TNRIYSFGCGMQGQLGN 310



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 5/203 (2%)

Query: 209 RLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLE 267
           R ++ L      Q+  G   +  L+  G +   G N HGQLG   +     +P+ +  L 
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC 169

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            +  V QI+AG ++   ++ +GVV+ +GS S   LG G+  D   P  +++    G   V
Sbjct: 170 GI-PVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSL--SGKKTV 226

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            +S G EH   L   G V+T+G G  G LGH    D+  P  ++ L      QV   +  
Sbjct: 227 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHH 286

Query: 388 TFVLVD-TGSVYGFGWMGFGSLG 409
           T VLV  T  +Y FG    G LG
Sbjct: 287 TLVLVALTNRIYSFGCGMQGQLG 309



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 103/229 (44%), Gaps = 6/229 (2%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +QI  G  H++ +SN   +F  G +  G LG   E     S   +       V Q+SA  
Sbjct: 121 IQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAGG 180

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           NH+  +  SG VF  G NS+   G  DT    F P +V++L G     ++ G   T  L+
Sbjct: 181 NHSFVLSLSGVVFGWGSNSAGQLGLGDTTDR-FVPTIVKSLSGKKTVSISCGGEHTATLS 239

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG-NGVVY 292
             G V T GS   GQLGH    D   P+ +A L     V Q+  G  + L +      +Y
Sbjct: 240 KGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWG-SKVSQVTCGRHHTLVLVALTNRIY 298

Query: 293 SFGSGSNFCLGHGEQHDELQPRAI--QTFRRKGIHVVRVSAGDEHVVAL 339
           SFG G    LG+GEQ  +  P  +   T       + ++ AG++H  AL
Sbjct: 299 SFGCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAGEKHSFAL 347



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 4/145 (2%)

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-HGDEIDKTLPEPLSSLKSHLAVQVCAR 384
           V++++ GD+H VAL + G ++ WG+   G LG   ++     P+ L SL      Q+ A 
Sbjct: 120 VIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLCGIPVAQISAG 179

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              +FVL  +G V+G+G    G LG  D   +D+ + P I+ SL       IS G  HT 
Sbjct: 180 GNHSFVLSLSGVVFGWGSNSAGQLGLGD--TTDRFV-PTIVKSLSGKKTVSISCGGEHTA 236

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLR 469
            ++  G +F FG     QLGH++L+
Sbjct: 237 TLSKGGTVFTFGSGGFGQLGHNSLK 261



 Score = 45.1 bits (105), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 362 IDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
           +DK T+  PL  L +   +Q+    + +  L + G ++ +G    G LG   R     + 
Sbjct: 103 MDKYTVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGL--RKEQALIQ 160

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            P+ L SL    V+QIS G  H+ V++  G +FG+G N   QLG
Sbjct: 161 SPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG 204


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 132/271 (48%), Gaps = 13/271 (4%)

Query: 197 GHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 256
           GH+D ++P F P +VE+L G     +  G + T  L  +G V + G+   G LGHG+  D
Sbjct: 176 GHKD-DKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRD 234

Query: 257 RPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQP 313
           R +P  I  PL +V +VV +A   ++   ++ +G +Y++G    F LG+ +     + +P
Sbjct: 235 RYSPLMIDGPLRDV-NVVHVACYENHSAVISEDGNLYTWGKAGPF-LGYMDDSVTKQTKP 292

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
           R +      G  +V+V+ G  H + +D  G VY++G    G LG G +   T P  + +L
Sbjct: 293 RLVDALY--GTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNL 350

Query: 374 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
            S   V  C R     +  D G ++ +GW   G LG   +G    +  P  ++      +
Sbjct: 351 VSICKVS-CGRHHSAAIDED-GVLFMWGWGARGQLG---QGEPKSLFSPTPVNGFNDQPL 405

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             +S G  HT  +T  G  + +GDN  +Q G
Sbjct: 406 EDVSCGYGHTAAITANGVAYCWGDNASSQCG 436



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 117/239 (48%), Gaps = 12/239 (5%)

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           G    G+LGH D   R  P  +  L  +G +V  IA G S+ +A+   G V+S+G+G   
Sbjct: 168 GGGDRGRLGHKDDKPRFLPNVVESL--LGQNVTMIACGGSHTIALNSKGQVFSWGAGPQG 225

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
           CLGHG   D   P  I    R  ++VV V+  + H   +   G +YTWGK     LG+ D
Sbjct: 226 CLGHGNLRDRYSPLMIDGPLRD-VNVVHVACYENHSAVISEDGNLYTWGKAG-PFLGYMD 283

Query: 361 E--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           +    +T P  + +L     VQV   +  T V+ + G VY FG   FG LG   +G    
Sbjct: 284 DSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELG---QGHDKA 340

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           + +P ++ +L +  + ++S G +H+  + + G LF +G   R QLG    +    PT +
Sbjct: 341 ITKPTMVPNLVS--ICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPV 397



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 155/346 (44%), Gaps = 19/346 (5%)

Query: 105 DIVETSAG-NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFP- 161
           ++VE+  G N   I  G  HT+ L S   VFS G+   G LGHG    +  S   I+ P 
Sbjct: 187 NVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDR-YSPLMIDGPL 245

Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ 221
              +VV V+  ENH+A + + G ++T G    F     D+     +PRLV+AL G    Q
Sbjct: 246 RDVNVVHVACYENHSAVISEDGNLYTWGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQ 305

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQL--GHGDTLDRPTPKSIAPLEEVGSVVQIAAGP 279
           V  G + T  +   G V++ G N  G+L  GH   + +PT   + P   + S+ +++ G 
Sbjct: 306 VACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPT---MVP--NLVSICKVSCGR 360

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            +  A+  +GV++ +G G+   LG GE      P  +  F  + +    VS G  H  A+
Sbjct: 361 HHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLE--DVSCGYGHTAAI 418

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHL-AVQVCARKRKTFVLVDTGSV 397
            ++G  Y WG       G    +   L  P    L S +   Q+      T ++   G +
Sbjct: 419 TANGVAYCWGDNASSQCGVPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQL 478

Query: 398 YGFGWMGFGSLGFPDRGVSDKVL-RPRILDSLRAHHVSQISTGLYH 442
           + +G    G LG    G + K   +P  ++SL    V  ++ G  H
Sbjct: 479 FTWGCNMSGQLG---NGEAKKTFSQPMPVESLSEKRVKMVACGEDH 521



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 12/233 (5%)

Query: 253 DTLDRPTPKSIAPLEEVGSVV-------QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
           D  D     S   +E  GS+V       Q+    + +L    +  +Y +G G    LGH 
Sbjct: 119 DKYDNKEAVSAKLVEMRGSIVSEDRLEVQLGTIKTKVLLKDNSCDLYLWGGGDRGRLGHK 178

Query: 306 EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKT 365
           +      P  +++    G +V  ++ G  H +AL+S G V++WG G  G LGHG+  D+ 
Sbjct: 179 DDKPRFLPNVVESLL--GQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDRY 236

Query: 366 LPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
            P  +   L+    V V   +  + V+ + G++Y +G  G   LG+ D  V+ K  +PR+
Sbjct: 237 SPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGKAG-PFLGYMDDSVT-KQTKPRL 294

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +D+L    + Q++ G  HT+V+ + GR++ FG N+  +LG    +   +PT +
Sbjct: 295 VDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMV 347



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 10/129 (7%)

Query: 116 QITTGRYHTLLISNSSVFSC----GSSLCGVLGHGPETT--QCVSFTRINFPSAAHVVQV 169
            ++ G  HT  I+ + V  C     SS CGV    P +   +  S   I  PS     Q+
Sbjct: 407 DVSCGYGHTAAITANGVAYCWGDNASSQCGV----PSSVYGELSSPRGIVLPSGIRPTQI 462

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           +   N    V   GQ+FT G N S   G+ +  +   +P  VE+L     K V  G +  
Sbjct: 463 NCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAKKTFSQPMPVESLSEKRVKMVACGEDHI 522

Query: 230 GFLTIRGHV 238
           G L   G V
Sbjct: 523 GCLVGHGWV 531


>gi|363734146|ref|XP_001235085.2| PREDICTED: serine/threonine-protein kinase Nek9 [Gallus gallus]
          Length = 965

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++A+K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 350 PQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPK 409

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + +T  G +Y+FGS    C+G  + +  + L+P  +  F
Sbjct: 410 HVEKLQG-KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFF 468

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HV  L  +  VYTWG G  G LG   E D   P+ +   K+   V
Sbjct: 469 LTNPVE--QVSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIV 526

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 429
            V      TF+L  TG V   G   F  LG      G+ +              +   L 
Sbjct: 527 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 586

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  IS G  HT  + +RGRL  FG N+  QLG
Sbjct: 587 FYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLG 621



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 131/307 (42%), Gaps = 40/307 (13%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ I++   +++ GS   G +G    +G E  + +   +++F     V QVS
Sbjct: 421 QVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPL---QLDFFLTNPVEQVS 477

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
             +NH A + ++ +V+T G      CG       D+    + P+ V+  K +    V  G
Sbjct: 478 CGDNHVAVLTRNREVYTWG------CGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCG 531

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 273
            + T  LT  G V  CG N   +LG          H    + P   S+   +++    + 
Sbjct: 532 CDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLSFYKIR 591

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            I+ G ++  ++   G + +FGS     LG G+    L    +      G  V+RVS GD
Sbjct: 592 TISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINLLAG-PLGGKQVIRVSCGD 650

Query: 334 EHVVALDSSGYVYTWGKGYCGAL-------GHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 651 EFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRPIFGSLHHVPDLSC-RGW 709

Query: 387 KTFVLVD 393
            T ++V+
Sbjct: 710 HTIIVVE 716



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD      P+ +  L+ 
Sbjct: 357 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQG 416

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  LD    + V Q
Sbjct: 417 KAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGI-DKAYGSEVLEPLQLDFFLTNPVEQ 475

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 476 VSCGDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDV 519



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 133/343 (38%), Gaps = 44/343 (12%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVV--------QVSASENHAAFVLQSGQVFT 187
           G+ L G LGHG          R ++    HV         QVS  ++    +   GQ++ 
Sbjct: 390 GTKLHGQLGHG---------DRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYA 440

Query: 188 CGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
            G +   C G  +     +  P  ++     P +QV+ G N    LT    V+T G   +
Sbjct: 441 FGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEY 500

Query: 247 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS------GSNF 300
           G+LG     D  TP+ +  + +  ++V +  G      +T  G V + G       G N 
Sbjct: 501 GRLGLDSEEDHYTPQKVD-VPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQ 559

Query: 301 CLGHGEQHDEL--QPRAIQTFRRKGIHVVRV---SAGDEHVVALDSSGYVYTWGKGYCGA 355
           C      HD     P A      K +   ++   S G  H  ++D  G + T+G   CG 
Sbjct: 560 CTSGIINHDTYCEVPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQ 619

Query: 356 LGHGDEID----KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
           LG GD         L  PL   +    ++V      T    D   ++ +G  G G L   
Sbjct: 620 LGVGDYKKHLGINLLAGPLGGKQ---VIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMT 676

Query: 412 --DRGVSDKVLR--PR-ILDSLRAHHVSQISTGLYHTVVVTDR 449
             +R     +    PR I  SL  HHV  +S   +HT++V ++
Sbjct: 677 PTERAHGSDICTSWPRPIFGSL--HHVPDLSCRGWHTIIVVEK 717



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 40/204 (19%)

Query: 299 NFCLGHGEQH----DELQPRAIQTFRRKGIHVV-----------RVSAGDEHVVALDSS- 342
           N CL    +     DEL  + + + RR+ +              R S  +E  +A+ +S 
Sbjct: 277 NSCLDQDPEKRPTADELLEQPLLSKRRREMEEKVTLLNGPNKRPRSSTVNEAPIAVVTSR 336

Query: 343 -GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGF 400
              VY WG G            K+ P+ L ++KS   A QVCA      V+     +Y +
Sbjct: 337 TSEVYVWGGG------------KSTPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTW 384

Query: 401 -----GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
                G    G LG  DR       +P+ ++ L+   + Q+S G   TV +TD G+L+ F
Sbjct: 385 VNMQGGTKLHGQLGHGDRA---SYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAF 441

Query: 456 GDNERAQLGHDTLRG--CLEPTEI 477
           G +    +G D   G   LEP ++
Sbjct: 442 GSDYYGCIGIDKAYGSEVLEPLQL 465


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 110/208 (52%), Gaps = 8/208 (3%)

Query: 259 TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAI 316
           TP+S+  L  + +V Q+A G  + + ++ +G VY++G  S   LG G++       P+ +
Sbjct: 112 TPRSLEALSGI-TVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170

Query: 317 QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
           ++     + VV+VSAG +H  AL  SG V+ WG+  CG LG GD  D+  P  +  L   
Sbjct: 171 RSL--SSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMK 228

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
             V     K  T VL   G+V+ FG   +G LG          L PR++  L    V++I
Sbjct: 229 KTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLG---HNSFRNALCPRLVAELWGAKVTKI 285

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLG 464
           + G YHT+V+TD  +++ FG NE  QLG
Sbjct: 286 ACGRYHTLVLTDHMKVYSFGCNEHGQLG 313



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 102/220 (46%), Gaps = 12/220 (5%)

Query: 194 FCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
           FC    D+  P F PR +EAL G+   QV  G   T  L+  G V+T G N+ GQLG G 
Sbjct: 102 FCV---DSPHPPFTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGK 158

Query: 254 T--LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHD 309
                  +P+ +  L  +  VVQ++AG  +  A++ +G V  FG G N C  LG G+  D
Sbjct: 159 EGCSSISSPQCVRSLSSM-PVVQVSAGGDHSFALSVSGSV--FGWGRNDCGQLGLGDTTD 215

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
              P  +     K    V  + G +H   L   G V+T+G G+ G LGH    +   P  
Sbjct: 216 RETPTLVHYLNMK--KTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRL 273

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           ++ L      ++   +  T VL D   VY FG    G LG
Sbjct: 274 VAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLG 313



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 114/246 (46%), Gaps = 14/246 (5%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           L+S++ V  C  S      H P T + +        S   V QV+    H   + + GQV
Sbjct: 94  LLSDTGVVFCVDS-----PHPPFTPRSLEAL-----SGITVTQVACGSQHTVVLSKDGQV 143

Query: 186 FTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           +T G NS    G  ++    I  P+ V +L  +P  QV+AG + +  L++ G V   G N
Sbjct: 144 YTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRN 203

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
             GQLG GDT DR TP  +  L  +   V  A G  +   +T +G V++FGSG    LGH
Sbjct: 204 DCGQLGLGDTTDRETPTLVHYLN-MKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGH 262

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
               + L PR +      G  V +++ G  H + L     VY++G    G LG  +E   
Sbjct: 263 NSFRNALCPRLVAELW--GAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHP 320

Query: 365 TLPEPL 370
            +P P+
Sbjct: 321 CVPLPV 326



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 9/191 (4%)

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T +GV     +G  FC+     H    PR+++     GI V +V+ G +H V L   G V
Sbjct: 88  TDDGVTLLSDTGVVFCVD--SPHPPFTPRSLEAL--SGITVTQVACGSQHTVVLSKDGQV 143

Query: 346 YTWGKGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
           YTWG+   G LG G E   ++  P+ + SL S   VQV A    +F L  +GSV+G+G  
Sbjct: 144 YTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRN 203

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G LG  D   +D+   P ++  L        + G  HT V+T  G +F FG     QL
Sbjct: 204 DCGQLGLGD--TTDRE-TPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQL 260

Query: 464 GHDTLRGCLEP 474
           GH++ R  L P
Sbjct: 261 GHNSFRNALCP 271



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 104/220 (47%), Gaps = 7/220 (3%)

Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSASE 173
           Q+  G  HT+++S +  V++ G +  G LG G E    +S  + +   S+  VVQVSA  
Sbjct: 126 QVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGG 185

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           +H+  +  SG VF  G N     G  DT +R    P LV  L          G + T  L
Sbjct: 186 DHSFALSVSGSVFGWGRNDCGQLGLGDTTDRET--PTLVHYLNMKKTVFAACGKDHTAVL 243

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T+ G V T GS  +GQLGH    +   P+ +A L     V +IA G  + L +T +  VY
Sbjct: 244 TMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWG-AKVTKIACGRYHTLVLTDHMKVY 302

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
           SFG   +  LG  E+     P  +Q   R+G  +  + AG
Sbjct: 303 SFGCNEHGQLGPREETHPCVPLPVQ-LPREGPIIQNIFAG 341



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 5/166 (3%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q++ G  H+  +S S SVF  G + CG LG G +TT   + T +++ +    V  +  +
Sbjct: 179 VQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLG-DTTDRETPTLVHYLNMKKTVFAACGK 237

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +H A +   G VFT G       GH ++ R    PRLV  L G    ++  G   T  LT
Sbjct: 238 DHTAVLTMDGTVFTFGSGHYGQLGH-NSFRNALCPRLVAELWGAKVTKIACGRYHTLVLT 296

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-IAAG 278
               V++ G N HGQLG  +      P  +  L   G ++Q I AG
Sbjct: 297 DHMKVYSFGCNEHGQLGPREETHPCVPLPVQ-LPREGPIIQNIFAG 341


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 127/293 (43%), Gaps = 7/293 (2%)

Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
            V  V+    H+A V+ SG+V   G+N    CG   T      P  V +L GV C  V+ 
Sbjct: 30  QVRDVACGLVHSAMVMGSGEVLCWGENKYGQCG-TGTQEQTEHPTFVGSLFGVACMSVSC 88

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G   T  ++  G V + G   +GQLGHG   +  TP  +  +     V+ +  G  + + 
Sbjct: 89  GGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGR-DVLAVTCGVGHTVI 147

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           V   G +Y+ G   N   G G   D L P+ +++ R +G+     S G  H   +   G 
Sbjct: 148 VLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQ--HASCGAGHTAVVTGGGE 205

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           V+T+G G CG LGHGD  D ++P  + +L   +   V   +  T        V+GFG   
Sbjct: 206 VFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNN 265

Query: 405 FGSLGFPDRGVSDKVL-RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
            G LG      S   L  PR ++ L+   V          + +T RG L  +G
Sbjct: 266 VGQLGASS--TSHPYLSEPRQMEFLKEEEVELCKCNQSEVIALTRRGALRAWG 316



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 15/282 (5%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           PR+++   G   + V  GL  +  +   G V   G N +GQ G G       P  +  L 
Sbjct: 20  PRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVGSLF 79

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVV 327
            V + + ++ G ++ + V+ +G V+S+G G+N  LGHG + +   P  +Q  R  G  V+
Sbjct: 80  GV-ACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMR--GRDVL 136

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
            V+ G  H V + + G +YT G    G  G G   D   P+ + SL+             
Sbjct: 137 AVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGH 196

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           T V+   G V+ FG    G LG  D      +  PR + +L    +S ++ G  +TV   
Sbjct: 197 TAVVTGGGEVFTFGSGSCGQLGHGD---CQDLSMPRRVGALVGIVMSMVACGEEYTVCAA 253

Query: 448 DRGRLFGFGDNERAQLG-----HDTLRGCLEPTEI-FIQEME 483
              R+FGFG N   QLG     H  L    EP ++ F++E E
Sbjct: 254 FDHRVFGFGLNNVGQLGASSTSHPYLS---EPRQMEFLKEEE 292



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 8/215 (3%)

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 310
           G+ +   TP+ +   + +G  V+ +A G  +   V G+G V  +G       G G Q   
Sbjct: 12  GEQVSSSTPRMLK--KAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYGQCGTGTQEQT 69

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
             P  + +    G+  + VS G  H V +   G V++WG G  G LGHG   + T P  +
Sbjct: 70  EHPTFVGSLF--GVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVV 127

Query: 371 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
            +++    + V      T +++  G +Y  GW   G  G    G +  +L P+ ++SLR 
Sbjct: 128 QAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGV---GSTSDLLSPQCVESLRG 184

Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
             V   S G  HT VVT  G +F FG     QLGH
Sbjct: 185 EGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGH 219



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 115/245 (46%), Gaps = 22/245 (8%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VV 167
           M ++ G  HT+++S +  VFS G    G LGHG       S   +  PS         V+
Sbjct: 84  MSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHG-------SRDNLTTPSVVQAMRGRDVL 136

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            V+    H   VL  G+++TCG N +  CG   T+  +  P+ VE+L+G   +  + G  
Sbjct: 137 AVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTS-DLLSPQCVESLRGEGVQHASCGAG 195

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVT 286
            T  +T  G V T GS + GQLGHGD  D   P+ +  L  VG V+  +A G  Y +   
Sbjct: 196 HTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGAL--VGIVMSMVACGEEYTVCAA 253

Query: 287 GNGVVYSFGSGSNFCLGHGE-QHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
            +  V+ FG  +   LG     H  L +PR ++  + + + + + +     V+AL   G 
Sbjct: 254 FDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEVELCKCN--QSEVIALTRRGA 311

Query: 345 VYTWG 349
           +  WG
Sbjct: 312 LRAWG 316


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 153/347 (44%), Gaps = 26/347 (7%)

Query: 117 ITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 176
           +T G +H++L +   VF  G    G LG   E  Q   +     P    V   SA   H 
Sbjct: 91  VTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVN---PRIKRVQMASAGGLHN 147

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
             + + G V+T G  +    GH    R +  PRL+E         V+AG + +  +T  G
Sbjct: 148 IALTEVGNVYTWGYGAFGALGHGSYERELL-PRLLEGPWKDRIVHVSAGGSHSAAVTESG 206

Query: 237 HVHTCGSNT-HGQLGHGD-------TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
            ++T G +   G+LGHG+        L RPT   +  L+    +  +  G  + +A+T +
Sbjct: 207 ELYTWGRDEGEGRLGHGNPDIMDEGALSRPT--KVQALDV--PIASVYCGGFFTMALTKS 262

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G ++S+G  +N  LGHG + +  +P+ +     + + +V+V+ G  H  AL   G V TW
Sbjct: 263 GQLWSWGGNANHELGHGTRANNWKPKVVAAL--EDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G G  G LGHG   +   P  + ++       +      T  + + G +Y +G      L
Sbjct: 321 GYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQL 380

Query: 409 GFPDRGVSDKVLRPRILDSLRAHH------VSQISTGLYHTVVVTDR 449
           G P  G+ D+ L P ++   +A H      V  +S G  H V +  R
Sbjct: 381 GIP--GLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 123/271 (45%), Gaps = 18/271 (6%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
           VT GL F   L     V   G    G+LG     ++  P  + P   +  V   +AG  +
Sbjct: 91  VTCGL-FHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKP-YVNP--RIKRVQMASAGGLH 146

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
            +A+T  G VY++G G+   LGHG    EL PR ++   +    +V VSAG  H  A+  
Sbjct: 147 NIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHSAAVTE 204

Query: 342 SGYVYTWGKGYC-GALGHG-----DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
           SG +YTWG+    G LGHG     DE   + P  + +L   +A   C     T  L  +G
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCG-GFFTMALTKSG 263

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            ++ +G      LG    G      +P+++ +L    + Q++ G +H   +T  G++  +
Sbjct: 264 QLWSWGGNANHELG---HGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 456 GDNERAQLGHDTLRGCLEPTEIFIQEMEEDT 486
           G     QLGH TL    EP    ++ M + T
Sbjct: 321 GYGGNGQLGHGTLENGKEPA--IVEAMADKT 349



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 154/383 (40%), Gaps = 42/383 (10%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG-- 189
           V++ G    G +GHG E T+ +         AA            A         TCG  
Sbjct: 37  VWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLF 96

Query: 190 ------DNSSFCCGHRDTNR-----------PIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
                 +   F  G  D  R           P   PR+         +  +AG      L
Sbjct: 97  HSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR------VQMASAGGLHNIAL 150

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           T  G+V+T G    G LGHG       P+ +  P ++   +V ++AG S+  AVT +G +
Sbjct: 151 TEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKD--RIVHVSAGGSHSAAVTESGEL 208

Query: 292 YSFGSGSNFC-LGHGEQH--DE---LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           Y++G       LGHG     DE    +P  +Q      + +  V  G    +AL  SG +
Sbjct: 209 YTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD---VPIASVYCGGFFTMALTKSGQL 265

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           ++WG      LGHG   +   P+ +++L+    VQV         L   G V  +G+ G 
Sbjct: 266 WSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGN 325

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G LG    G  +    P I++++     + I+ G   T  +T+ G L+ +G N   QLG 
Sbjct: 326 GQLG---HGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGI 382

Query: 466 DTLRG-CLEPTEI-FIQEMEEDT 486
             L+   L+P  + F Q + E T
Sbjct: 383 PGLKDEQLDPVLVQFPQALHEKT 405



 Score = 40.0 bits (92), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 30/173 (17%)

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK----- 374
           RR G    RVS+G+   +       V+ WG+G  G +GHG E  + LP  +S+LK     
Sbjct: 18  RRIGYLADRVSSGEPAELE------VWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFT 71

Query: 375 --SHLAVQVCARKRKTFVLVDTG----------SVYGFGWMGFGSLGFPDRGVSDK-VLR 421
             + +  ++ A+ R   V V  G           V+ +G    G LG        K  + 
Sbjct: 72  GMAPIQGRMPAKPRLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVN 131

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           PRI        V   S G  H + +T+ G ++ +G      LGH +    L P
Sbjct: 132 PRI------KRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP 178


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 119/237 (50%), Gaps = 8/237 (3%)

Query: 222  VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGP 279
            V+ G N    LT  GHV+T G N  G+LGHGD    P   PK +   +    V ++  G 
Sbjct: 880  VSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKS-KCVKEVVCGG 938

Query: 280  SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
             + LA T +G VY +G+G    LG G++     P  I+T R+  +HV +++AG  H + +
Sbjct: 939  EHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRK--MHVTQLAAGYAHTIVV 996

Query: 340  DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
              SG V  +G G  G LG G   D  +P  L ++ S   VQ       T +L + G VY 
Sbjct: 997  LKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPS--IVQAACGYCHTALLTEAGEVYT 1054

Query: 400  FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
             G    G LG  D   +D+ L P++++ L    +  I+ G +HT+ +TD   ++ +G
Sbjct: 1055 CGSAMSGQLGHADNLQNDR-LAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWG 1110



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 141/323 (43%), Gaps = 20/323 (6%)

Query: 146  GPETTQ---CVSFTRINFP-----SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 197
            GPE+ Q     S  ++N P     S   VV VS   NH A + ++G V+T G N S   G
Sbjct: 849  GPESEQDDGVSSGGKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELG 908

Query: 198  HRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD 256
            H D +  P   P+ V   K    K+V  G   T   T  G V+  G+   GQLG GD   
Sbjct: 909  HGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTL 968

Query: 257  RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAI 316
               P  I  L ++  V Q+AAG ++ + V  +G V  FG G    LG G + D L P  +
Sbjct: 969  HWLPVPIKTLRKM-HVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKL 1027

Query: 317  QTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI--DKTLPEPLSSLK 374
            Q        +V+ + G  H   L  +G VYT G    G LGH D +  D+  P+ +  L 
Sbjct: 1028 QAMP----SIVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLN 1083

Query: 375  SHLAVQVCARKRKTFVLVDTGSVYGFGWM----GFGSLGFPDRGVSDKVLRPRILDSLRA 430
                  +      T  + D  +VY +G +      G++    +    K + P I+  L  
Sbjct: 1084 GKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMG 1143

Query: 431  HHVSQISTGLYHTVVVTDRGRLF 453
              +S +S G  H+V  T  G ++
Sbjct: 1144 KRISLVSCGHAHSVATTMDGEVY 1166



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 100/196 (51%), Gaps = 9/196 (4%)

Query: 272  VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRV 329
            VV ++ G ++  A+T NG VY++G   +  LGHG++    +L P+ +  F+ K +    V
Sbjct: 877  VVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVK--EV 934

Query: 330  SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
              G EH +A   SG VY WG G  G LG GD     LP P+ +L+     Q+ A    T 
Sbjct: 935  VCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTI 994

Query: 390  VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            V++ +G V  FG    G LG    G+   +L P  L ++ +  + Q + G  HT ++T+ 
Sbjct: 995  VVLKSGEVMVFGGGEVGQLG---TGMRKDLLVPTKLQAMPS--IVQAACGYCHTALLTEA 1049

Query: 450  GRLFGFGDNERAQLGH 465
            G ++  G     QLGH
Sbjct: 1050 GEVYTCGSAMSGQLGH 1065



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 80/155 (51%), Gaps = 5/155 (3%)

Query: 325  HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVC 382
             VV VS G  H  AL  +G+VYTWG+   G LGHGD+  + +  P+ +   KS    +V 
Sbjct: 876  QVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVV 935

Query: 383  ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                 T    ++GSVYG+G    G LG  DR +      P  + +LR  HV+Q++ G  H
Sbjct: 936  CGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLH---WLPVPIKTLRKMHVTQLAAGYAH 992

Query: 443  TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            T+VV   G +  FG  E  QLG    +  L PT++
Sbjct: 993  TIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKL 1027



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 139/336 (41%), Gaps = 42/336 (12%)

Query: 116  QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
            ++  G  HTL  + S SV+  G+   G LG G  T   +    I      HV Q++A   
Sbjct: 933  EVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVP-IKTLRKMHVTQLAAGYA 991

Query: 175  HAAFVLQSGQV--FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H   VL+SG+V  F  G+      G R   + +  P  ++A+  +   Q   G   T  L
Sbjct: 992  HTIVVLKSGEVMVFGGGEVGQLGTGMR---KDLLVPTKLQAMPSI--VQAACGYCHTALL 1046

Query: 233  TIRGHVHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQ-IAAGPSYMLAVTGNG 289
            T  G V+TCGS   GQLGH D L  DR  PK +  L   G  ++ IA G  + +A+T   
Sbjct: 1047 TEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLN--GKRIRFIACGSFHTIAITDLD 1104

Query: 290  VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR---------VSAGDEHVVALD 340
             VY++G       G        Q R     +R    +V+         VS G  H VA  
Sbjct: 1105 NVYTWGG----VQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATT 1160

Query: 341  SSGYVYTW-------------GKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARK 385
              G VY W             G G   A G  +   +   +P+   +    +     A +
Sbjct: 1161 MDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGE 1220

Query: 386  RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
              T V+ + G +Y +G   FG LG  D+G   ++++
Sbjct: 1221 EFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQ 1256



 Score = 51.6 bits (122), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 102/248 (41%), Gaps = 38/248 (15%)

Query: 115  MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHG---------PETTQCVSFTRINFPSAA 164
            +Q   G  HT L++ +  V++CGS++ G LGH          P+  + ++  RI F    
Sbjct: 1034 VQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRF---- 1089

Query: 165  HVVQVSASENHAAFVLQSGQVFTCGD---NSSFCCGHRDTNRPIFR---PRLVEALKGVP 218
                ++    H   +     V+T G      S     ++    I +   P +V+ L G  
Sbjct: 1090 ----IACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKR 1145

Query: 219  CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ---LGHGDTLDRPTPKSIAPL--------E 267
               V+ G   +   T+ G V+   S    Q   L  G  L   +  + APL        +
Sbjct: 1146 ISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQ 1205

Query: 268  EVGS---VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            +  S   V   AAG  + L VT NG++YS+GSG+   LG G+Q D  +   +        
Sbjct: 1206 DAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLGLGDQGDRAEIVQVAKSEESRR 1265

Query: 325  HVVRVSAG 332
              VR++ G
Sbjct: 1266 RSVRLTYG 1273


>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 708

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 170/403 (42%), Gaps = 66/403 (16%)

Query: 123 HTLLI-SNSSVFSCGSSLCGVLGHGPE--TTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           H+L + S+  +++ G +L G LG+  E  +++ V   R+        V VSA  NH+  V
Sbjct: 171 HSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVTGG-----VTVSAGANHSLAV 225

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
              G V+  GDNS    G   T   +  P  V  ++G     + AG N +  +   G V 
Sbjct: 226 SADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRG--SVAMAAGDNHSLAVRDDGTVW 283

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS--- 296
             GSN HGQLG+G  +D   P  +  LE VG+V   AAG ++ LAV  +G V+++GS   
Sbjct: 284 AWGSNGHGQLGNGFMVDNSEPGRVPGLEGVGAV---AAGSNHSLAVRDDGTVWAWGSNVE 340

Query: 297 ---------------------------------------GSNFCLG---HGEQHDELQPR 314
                                                  GS +  G   HGE  D     
Sbjct: 341 GQRGDGTTGQLSAPTRVPGVSGVVGVAANVFHSLAVSADGSAWAWGHNSHGELGDGSTRN 400

Query: 315 AIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
           +    R  G+  VV V+AG  H +AL + G V  WG    G LG G     ++P  +  L
Sbjct: 401 SPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTRASHSVPAQVRGL 460

Query: 374 KSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHV 433
           +    V V A    +  L+  G+V+ +G+   G LG    G +     P  +  L    V
Sbjct: 461 RG--VVAVAAGSSHSLALLADGTVWTWGYNLNGQLG---DGTTTYRYEPVAVKGLEG--V 513

Query: 434 SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
             ++ G  H++ V   G  + +G+N + QLG  TL     P E
Sbjct: 514 VAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAPVE 556



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 163/363 (44%), Gaps = 25/363 (6%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           +  G  H+L +  + +V++ GS++ G  G G  T Q  + TR+     + VV V+A+  H
Sbjct: 316 VAAGSNHSLAVRDDGTVWAWGSNVEGQRGDG-TTGQLSAPTRVP--GVSGVVGVAANVFH 372

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           +  V   G  +  G NS    G   T N P   P  V+ LK V    V AG + +  L  
Sbjct: 373 SLAVSADGSAWAWGHNSHGELGDGSTRNSPA--PVRVDGLKEVVA--VAAGSSHSLALLA 428

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G NT GQLG G       P  +  L     VV +AAG S+ LA+  +G V+++
Sbjct: 429 DGTVLAWGDNTFGQLGDGTRASHSVPAQVRGLR---GVVAVAAGSSHSLALLADGTVWTW 485

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G      +P A++        VV V+AG  H +A+ S G  + WG+   G
Sbjct: 486 GYNLNGQLGDGTTTYRYEPVAVKGLE----GVVAVAAGGNHSLAVRSDGTAWAWGENVKG 541

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG     D TL    + ++   A +  A  +   + V +    GF W  +G+      G
Sbjct: 542 QLG-----DGTLTSRPAPVEVKAAAKAVAAAQGLSLAVGS---DGFPWA-WGNNSSGQLG 592

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
                 RP  +    A  V  ++ G  H++ ++  G ++ +G N R QLG  TL   L P
Sbjct: 593 DGSTTSRPMPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLDRRLAP 652

Query: 475 TEI 477
           T +
Sbjct: 653 TRV 655



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 149/346 (43%), Gaps = 25/346 (7%)

Query: 122 YHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           +H+L +S + S ++ G +  G LG G  T    +  R++      VV V+A  +H+  +L
Sbjct: 371 FHSLAVSADGSAWAWGHNSHGELGDG-STRNSPAPVRVD--GLKEVVAVAAGSSHSLALL 427

Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
             G V   GDN+    G  D  R     P  V  L+GV    V AG + +  L   G V 
Sbjct: 428 ADGTVLAWGDNTFGQLG--DGTRASHSVPAQVRGLRGVVA--VAAGSSHSLALLADGTVW 483

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T G N +GQLG G T  R  P ++  LE    VV +AAG ++ LAV  +G  +++G    
Sbjct: 484 TWGYNLNGQLGDGTTTYRYEPVAVKGLE---GVVAVAAGGNHSLAVRSDGTAWAWGENVK 540

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG G       P  ++   +       +S      +A+ S G+ + WG    G LG G
Sbjct: 541 GQLGDGTLTSRPAPVEVKAAAKAVAAAQGLS------LAVGSDGFPWAWGNNSSGQLGDG 594

Query: 360 DEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
               +  P P+    +   V V A    +  L   G V+ +G    G LG    G  D+ 
Sbjct: 595 STTSR--PMPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLG---EGTLDRR 649

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           L P  +  L              ++ V D G ++ +GDN   QLG+
Sbjct: 650 LAPTRVQGLSGVVAVAAGGAF--SLAVRDDGSVWSWGDNAFGQLGN 693



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 131/296 (44%), Gaps = 18/296 (6%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L L+++ +V + G +  G LG G   +  V            VV V+A  
Sbjct: 414 VAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTRASHSVPAQVRGLRG---VVAVAAGS 470

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           +H+  +L  G V+T G N +   G   T    + P  V+ L+GV    V AG N +  + 
Sbjct: 471 SHSLALLADGTVWTWGYNLNGQLGDGTTTYR-YEPVAVKGLEGVVA--VAAGGNHSLAVR 527

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G     G N  GQLG G    RP     AP+E   +   +AA     LAV  +G  ++
Sbjct: 528 SDGTAWAWGENVKGQLGDGTLTSRP-----APVEVKAAAKAVAAAQGLSLAVGSDGFPWA 582

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+ S+  LG G       P  +Q        VV V+AG+ H +AL   G V+ WG+   
Sbjct: 583 WGNNSSGQLGDGSTTSRPMPMRVQGAG----EVVAVAAGNGHSLALSPEGGVWAWGQNAR 638

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
           G LG G    +  P  +  L     V V A    +  + D GSV+ +G   FG LG
Sbjct: 639 GQLGEGTLDRRLAPTRVQGLSG--VVAVAAGGAFSLAVRDDGSVWSWGDNAFGQLG 692



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 145/316 (45%), Gaps = 26/316 (8%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAG 225
            +++   +H+  V Q G V+  G NS    G  D    + R P  V  L GV    V AG
Sbjct: 13  ARIATGGSHSLSVHQDGTVWAVGGNSVGQLG--DGTTSLRRVPVRVLGLSGVVT--VAAG 68

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              +  +   G V   G+N+ GQLG G   +R  P  +  L     VV +AAG  + LAV
Sbjct: 69  GGHSLAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGLS---GVVAVAAGGYHSLAV 125

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           + +G V+++G+ S+  LG G   +  +P  +    R    VV V+AG  H +A+ S G +
Sbjct: 126 SADGTVWAWGNNSSGQLGDGSFDNRAEPVRV----RGSSGVVAVAAGGAHSLAVRSDGIL 181

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           + WG    G LG+  E + +  EP+  L+    V V A    +  +   G+V+ +G    
Sbjct: 182 WAWGDNLYGQLGNRGEFNSS--EPVQVLRVTGGVTVSAGANHSLAVSADGTVWAWGDNSH 239

Query: 406 GSLGF----PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
           G LG     P   +  +V  P +  S+       ++ G  H++ V D G ++ +G N   
Sbjct: 240 GQLGIARTTPLLSIPGRV--PEVRGSV------AMAAGDNHSLAVRDDGTVWAWGSNGHG 291

Query: 462 QLGHDTLRGCLEPTEI 477
           QLG+  +    EP  +
Sbjct: 292 QLGNGFMVDNSEPGRV 307



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 16/253 (6%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L L+++ +V++ G +L G LG G   T    +  +       VV V+A  
Sbjct: 464 VAVAAGSSHSLALLADGTVWTWGYNLNGQLGDG---TTTYRYEPVAVKGLEGVVAVAAGG 520

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           NH+  V   G  +  G+N     G         RP  VE            GL+    + 
Sbjct: 521 NHSLAVRSDGTAWAWGEN---VKGQLGDGTLTSRPAPVEVKAAAKAVAAAQGLSLA--VG 575

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G     G+N+ GQLG G T  RP P  +   +  G VV +AAG  + LA++  G V++
Sbjct: 576 SDGFPWAWGNNSSGQLGDGSTTSRPMPMRV---QGAGEVVAVAAGNGHSLALSPEGGVWA 632

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G  +   LG G     L P  +Q         V V+AG    +A+   G V++WG    
Sbjct: 633 WGQNARGQLGEGTLDRRLAPTRVQGLSGV----VAVAAGGAFSLAVRDDGSVWSWGDNAF 688

Query: 354 GALGHGDEIDKTL 366
           G LG+   +  T 
Sbjct: 689 GQLGNAPPVYATF 701


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 141/302 (46%), Gaps = 15/302 (4%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA 224
           V +S  + H A V  +G+++  G N       G ++T R   +P  V+ALK    K    
Sbjct: 42  VHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVR---KPTCVKALKPEKTKLAVC 98

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G N T   T +G+V+  G N+ GQLG GDT +R T   I+       + Q+AAG     A
Sbjct: 99  GRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAA 158

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           VT +G ++ +G  S   +G  ++     P  +      G  V  +S G  H   +   G 
Sbjct: 159 VTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV----GKPVSSISCGYYHSAFITGDGE 214

Query: 345 VYTWGKGYCGALGHGDEIDKT--LPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGW 402
           +YT+G+   G LG   E  K   +P+P+  +   +    C  +  T VL +TG VY FG 
Sbjct: 215 LYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEH-TVVLTETG-VYTFGL 272

Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
             +G LG         V  P+ +  LR+H +  ++ G  HT V+ + G +F FGD    +
Sbjct: 273 GQYGQLGHGTLLFKTSV--PKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGK 330

Query: 463 LG 464
           LG
Sbjct: 331 LG 332



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 16/248 (6%)

Query: 120 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 177
           GR HTL+ +   +V++ G +  G LG G +T +  +F  I+F +  H + Q++A    +A
Sbjct: 99  GRNHTLVYTEKGNVYAAGGNSEGQLGLG-DTEERTTFHLISFFTNQHKIKQLAAGSYTSA 157

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            V + GQ+F  GDNS    G  D    +  P  V+   G P   ++ G   + F+T  G 
Sbjct: 158 AVTEDGQLFVWGDNSEGQIGLADKT-CVSVPCQVDV--GKPVSSISCGYYHSAFITGDGE 214

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGPSYMLAVTGNGVVYSF 294
           ++T G   +G+LG    L      S  P   +G    V ++A G  + + +T  GV Y+F
Sbjct: 215 LYTFGEPENGKLG---LLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETGV-YTF 270

Query: 295 GSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           G G    LGHG    +   P++++  R   IH   V+ G+ H   +  +G ++T+G G  
Sbjct: 271 GLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIH--NVTCGESHTAVIAENGLMFTFGDGRH 328

Query: 354 GALGHGDE 361
           G LG G+E
Sbjct: 329 GKLGLGEE 336



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 124/257 (48%), Gaps = 27/257 (10%)

Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPT-PKSIAPLEEVGSVVQIAAG 278
           ++ G   T  +T  G ++  GSN  GQLG G  +T+ +PT  K++ P +   +V     G
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAV----CG 99

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            ++ L  T  G VY+ G  S   LG G+  +      I  F  +   + +++AG     A
Sbjct: 100 RNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQH-KIKQLAAGSYTSAA 158

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLP------EPLSSLKSHLAVQVCARKRKTFVLV 392
           +   G ++ WG    G +G  D+   ++P      +P+SS+        C      F+  
Sbjct: 159 VTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSIS-------CGYYHSAFITG 211

Query: 393 DTGSVYGFGWMGFGSLGF-PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
           D G +Y FG    G LG  P++  + +V +P +L  +    V++++ G  HTVV+T+ G 
Sbjct: 212 D-GELYTFGEPENGKLGLLPEQLKNSRVPQP-VLGIM--EKVNKVACGGEHTVVLTETG- 266

Query: 452 LFGFGDNERAQLGHDTL 468
           ++ FG  +  QLGH TL
Sbjct: 267 VYTFGLGQYGQLGHGTL 283


>gi|296445910|ref|ZP_06887861.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
 gi|296256578|gb|EFH03654.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
          Length = 484

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 170/416 (40%), Gaps = 19/416 (4%)

Query: 68  HSIYAGMSRNVQIELLNRCNGNWKRVLRFLQ-SVEHSSDIVETSAGNQMQITTGRYHTLL 126
           +S  AG +  +  E+     G     + F + +V   + I+      Q  +  G YHT +
Sbjct: 34  YSSKAGQTVKLVAEVDGLGGGAPTGTVSFAEGAVALGAGILSPYGAGQATLAGGSYHTCV 93

Query: 127 ISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
           +  +S   C G +  G LG G  T +          S   V+ + A  +H   +  +G V
Sbjct: 94  LGAASDVQCWGDNSYGQLGDGTITDRYSPVAVSGLSSG--VLAIVAGAHHTCALTAAGAV 151

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
              G N     G   T      P  V+ L          GL+ T  LTI G V   GSN 
Sbjct: 152 ACWGPNYFGMLGD-GTGVQRLTPVAVQGLSSGVVAIAAGGLH-TCALTIAGAVKCWGSNA 209

Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
            GQLG G  LDR  P ++  L     VV IAAG  +  A+T  G V  +GS     +G G
Sbjct: 210 KGQLGDGTKLDRYVPVAVQGLSS--GVVAIAAGAEHSCALTSVGAVKCWGSNEAGAVGDG 267

Query: 306 EQHDELQ---PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
                L    P A+    R    +V +SAG+ H  AL ++  V  WG    G LG G   
Sbjct: 268 TSGYHLYRLVPVAVSGLSRD---IVAISAGNNHTCALTAARAVKCWGLNTYGELGDGTTT 324

Query: 363 DKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
            + +P P+S L S  +A+   A  +    L   G V  +G   FG LG  D  V+D+   
Sbjct: 325 SRNIPVPVSGLSSGVVAISTGATSQFNCALKGGGGVLCWGRNHFGELG--DLSVTDRSTP 382

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             +    R   V  I+ G +HT +    G +  +G N   QLG  T+     P  +
Sbjct: 383 VAVAGHTR--DVDAIALGKFHTCISIGSGIVRCWGRNNAGQLGDGTIANRRSPAPV 436


>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG-6]
 gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG6]
          Length = 778

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 162/390 (41%), Gaps = 20/390 (5%)

Query: 89  NWKRVLRFLQSVEHSS--DIVETSAGNQMQITTGRYHTLLISNSSVFSC-GSSLCGVLGH 145
           NW   L    + E S+  D+V  S+G    I  G  HT  I+     SC G +    LG 
Sbjct: 287 NWSGQLGDGTTDERSTPVDVVGLSSG-VTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGD 345

Query: 146 GPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPI 205
           G  T Q          S A    ++A + H   +   G V   G N S   G   T +  
Sbjct: 346 GTTTQQSTPVVVNGLSSRA--AAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQR- 402

Query: 206 FRPRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
             P  VE L  GV    +TAG + T  L+  G V   G+N  GQLG G T+ R TP  + 
Sbjct: 403 RTPMQVEGLSSGV--ADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTTIQRSTPVQVE 460

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            L     VV I AG S+  A++  G V  +G   +  LG+G       P  ++       
Sbjct: 461 GLSS--GVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSG-- 516

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
            V+ ++AGD H  AL + G V  WG  + G LG G    + +P  +  L S +A  + A 
Sbjct: 517 -VMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSGVAA-IAAG 574

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              T  L   G V  +GW  +  LG   R   +  ++   L S     V+ I+ G  HT 
Sbjct: 575 GSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQVEGLSS----GVAAIAAGYAHTC 630

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            +   G +  +G N   QLG  T    + P
Sbjct: 631 ALITSGEVTCWGWNWYGQLGDGTTTQRMTP 660



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 151/349 (43%), Gaps = 20/349 (5%)

Query: 122 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           Y   L +NS+V   G++  G LG G  T Q  +   +N  S+  VV ++A   H   +  
Sbjct: 67  YTCALTTNSAVICWGNNEFGQLGDG-TTIQRNTPVAVNGLSSG-VVAIAAGYAHTCALTT 124

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFR--PRLVEAL-KGVPCKQVTAGLNFTGFLTIRGHV 238
           SG V   G+N S   G       I R  P  V  L  GV    + AG   T  LT  G V
Sbjct: 125 SGGVSCWGNNES---GQLGNGITIQRRTPVQVAGLSSGV--AAIAAGEYHTCALTTDGAV 179

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
              GSN +GQLG G T  R TP  +A L     V  I AG S+  A+T  G V  +G   
Sbjct: 180 TCWGSNGYGQLGDGTTTQRSTPVQVAGLSS--GVTAITAGGSHTCALTTGGAVTCWGRNG 237

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
           N  LG G       P  +     +   V  ++AGD +  AL + G V  WG  + G LG 
Sbjct: 238 NGQLGDGTTTQRSTPVNVLGLSSE---VAAITAGDVYTCALTTGGGVTCWGANWSGQLGD 294

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           G   +++ P  +  L S +   + A    T  +   G V  +G   +  LG    G + +
Sbjct: 295 GTTDERSTPVDVVGLSSGV-TAIAAGNDHTCAITTGGGVSCWGVNQYSQLG---DGTTTQ 350

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
              P +++ L +   + I+ G  HT  +T  G +  +G N   QLG  T
Sbjct: 351 QSTPVVVNGLSS-RAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGT 398



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 149/363 (41%), Gaps = 17/363 (4%)

Query: 117 ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           I  G YHT  ++     +C GS+  G LG G  T +          S   V  ++A  +H
Sbjct: 163 IAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSG--VTAITAGGSH 220

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-GVPCKQVTAGLNFTGFLTI 234
              +   G V   G N +   G   T +   R   V  L        +TAG  +T  LT 
Sbjct: 221 TCALTTGGAVTCWGRNGNGQLGDGTTTQ---RSTPVNVLGLSSEVAAITAGDVYTCALTT 277

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G+N  GQLG G T +R TP  +  L     V  IAAG  +  A+T  G V  +
Sbjct: 278 GGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSS--GVTAIAAGNDHTCAITTGGGVSCW 335

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G      LG G    +  P  +     +      ++AGD H  A+ + G V  WG+ + G
Sbjct: 336 GVNQYSQLGDGTTTQQSTPVVVNGLSSR---AAAIAAGDGHTCAMTTGGGVSCWGRNWSG 392

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG G    +  P  +  L S +A  + A    T  L   G V  +G    G LG    G
Sbjct: 393 QLGDGTTTQRRTPMQVEGLSSGVA-DITAGDSHTCALSTEGGVTCWGNNESGQLG---DG 448

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
            + +   P  ++ L +  V+ I+ G  HT  ++  G +  +G N   QLG+ T      P
Sbjct: 449 TTIQRSTPVQVEGLSSGVVA-ITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQRSTP 507

Query: 475 TEI 477
            ++
Sbjct: 508 VQV 510



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 173/394 (43%), Gaps = 18/394 (4%)

Query: 89  NWKRVLRFLQSVEHSSDI-VETSAGNQMQITTGRYHTLLISNSSVFSC-GSSLCGVLGHG 146
           NW   L    + +  + + VE  +     IT G  HT  +S     +C G++  G LG G
Sbjct: 389 NWSGQLGDGTTTQRRTPMQVEGLSSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDG 448

Query: 147 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 206
             T Q  +  ++   S+  VV ++A ++H   +   G V   G N S   G+  T +   
Sbjct: 449 -TTIQRSTPVQVEGLSSG-VVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTTTQR-S 505

Query: 207 RPRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
            P  VE L  GV    +TAG + T  LT  G V   G N +GQLG G T  R  P ++  
Sbjct: 506 TPVQVEGLSSGV--MAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVG 563

Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
           L     V  IAAG S+  A++  G V  +G  +   LG G + +   P  ++        
Sbjct: 564 LSS--GVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQVEGLSSG--- 618

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           V  ++AG  H  AL +SG V  WG  + G LG G    +  P  ++ L S +A  V A  
Sbjct: 619 VAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLSSEVAAIV-AGY 677

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T  L   G V  +GW  +  LG    G   +   P  +D L +  V+ ++ G  HT  
Sbjct: 678 AHTCALSTGGGVTCWGWNKYYQLG---NGTISQRSIPMDVDGLSS-GVAALAAGDAHTCG 733

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           ++  G +  +G +   QLG  T+     P ++ +
Sbjct: 734 LSTGGGVTCWGWDVYGQLGVGTIAYRTTPVDVTV 767



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/323 (30%), Positives = 138/323 (42%), Gaps = 23/323 (7%)

Query: 156 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG--DNSSFCC------GHRDTNRPIFR 207
           T +N+   A V++ + +       + +G  +TC    NS+  C      G       I R
Sbjct: 37  TNLNYELPATVLEANIASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQR 96

Query: 208 --PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
             P  V  L  GV    + AG   T  LT  G V   G+N  GQLG+G T+ R TP  +A
Sbjct: 97  NTPVAVNGLSSGV--VAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVA 154

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
            L     V  IAAG  +  A+T +G V  +GS     LG G       P  +        
Sbjct: 155 GLSS--GVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLSSG-- 210

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
            V  ++AG  H  AL + G V  WG+   G LG G    ++ P  +  L S +A  + A 
Sbjct: 211 -VTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSSEVAA-ITAG 268

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              T  L   G V  +G    G LG    G +D+   P  +  L +  V+ I+ G  HT 
Sbjct: 269 DVYTCALTTGGGVTCWGANWSGQLG---DGTTDERSTPVDVVGLSS-GVTAIAAGNDHTC 324

Query: 445 VVTDRGRLFGFGDNERAQLGHDT 467
            +T  G +  +G N+ +QLG  T
Sbjct: 325 AITTGGGVSCWGVNQYSQLGDGT 347



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 143/352 (40%), Gaps = 15/352 (4%)

Query: 117 ITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           IT G  HT  ++     +C G +  G LG G  T +      +   S   V  ++A + +
Sbjct: 214 ITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSS--EVAAITAGDVY 271

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
              +   G V   G N S   G   T+       +V    GV    + AG + T  +T  
Sbjct: 272 TCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSSGV--TAIAAGNDHTCAITTG 329

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V   G N + QLG G T  + TP  +  L        IAAG  +  A+T  G V  +G
Sbjct: 330 GGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSS--RAAAIAAGDGHTCAMTTGGGVSCWG 387

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
              +  LG G       P  ++        V  ++AGD H  AL + G V  WG    G 
Sbjct: 388 RNWSGQLGDGTTTQRRTPMQVEGLSSG---VADITAGDSHTCALSTEGGVTCWGNNESGQ 444

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG G  I ++ P  +  L S + V + A    T  L   G V  +G  G G LG    G 
Sbjct: 445 LGDGTTIQRSTPVQVEGLSSGV-VAITAGDSHTCALSTEGGVTCWGGNGSGQLG---NGT 500

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           + +   P  ++ L +  V  I+ G  HT  +T  G +  +G N   QLG  T
Sbjct: 501 TTQRSTPVQVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGT 551



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 109/268 (40%), Gaps = 14/268 (5%)

Query: 115 MQITTGRYHTLLISNSSVFSC-GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           M IT G  HT  ++     +C G +  G LG G  T + +    +   S   V  ++A  
Sbjct: 518 MAITAGDSHTCALTTGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSG--VAAIAAGG 575

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR-PRLVEALK-GVPCKQVTAGLNFTGF 231
           +H   +   G V   G N+    G  D  R     P  VE L  GV    + AG   T  
Sbjct: 576 SHTCALSTEGGVTCWGWNTYDQLG--DGTRTNHNTPVQVEGLSSGV--AAIAAGYAHTCA 631

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           L   G V   G N +GQLG G T  R TP  +  L     V  I AG ++  A++  G V
Sbjct: 632 LITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLSS--EVAAIVAGYAHTCALSTGGGV 689

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
             +G    + LG+G       P  +         V  ++AGD H   L + G V  WG  
Sbjct: 690 TCWGWNKYYQLGNGTISQRSIPMDVDGLSSG---VAALAAGDAHTCGLSTGGGVTCWGWD 746

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAV 379
             G LG G    +T P  ++ L  +L V
Sbjct: 747 VYGQLGVGTIAYRTTPVDVTVLFVYLPV 774



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 5/168 (2%)

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
           EL    ++       H   ++AGD +  AL ++  V  WG    G LG G  I +  P  
Sbjct: 42  ELPATVLEANIASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRNTPVA 101

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           ++ L S + V + A    T  L  +G V  +G    G LG    G++ +   P  +  L 
Sbjct: 102 VNGLSSGV-VAIAAGYAHTCALTTSGGVSCWGNNESGQLG---NGITIQRRTPVQVAGLS 157

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +  V+ I+ G YHT  +T  G +  +G N   QLG  T      P ++
Sbjct: 158 SG-VAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQV 204


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 30/345 (8%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRIN-FPSAAHVVQVSASENHAAFVLQSGQVFTCG- 189
           VFS G++    LG+     Q V   +IN   S  +   ++  +     +   G++++CG 
Sbjct: 1   VFSWGNTRDAELGY--VANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWSCGS 58

Query: 190 ------DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
                 D  SF  GH +++       LVE L+     QV+A  +    +T++G V++ GS
Sbjct: 59  HTRPQNDVKSFL-GHAESSLA-----LVEGLESERFIQVSATSHVLA-VTLQGEVYSWGS 111

Query: 244 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
           N++ QLG     +RP   +    EEV   VQ+ AG  +  AV+  G +Y++G G    LG
Sbjct: 112 NSYKQLGRDGVNNRPMKITALEGEEV---VQVCAGGHHSAAVSKAGNLYTWGRGGYGRLG 168

Query: 304 HGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGKGYCGALGHGDE 361
           HG   D   P  +  F  +GI VV V+ G  D H + +   G++Y++G G  G LGHG  
Sbjct: 169 HGTSDDVNVPTRVAAFP-EGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTN 227

Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
             +  PE    +   +   VC       + + +G++Y +G      LG    G    + +
Sbjct: 228 DRRRQPE---RIDFDIVKVVCGSSTSAAISL-SGALYVWGGGRRYRLG---TGTEAVIWQ 280

Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
           PR   +L  H V   +    H V VTDRG +F +G N+  QLG D
Sbjct: 281 PRTAHALNTHKVVDCALSSEHGVAVTDRGEVFVWGANDHGQLGAD 325



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 120/283 (42%), Gaps = 19/283 (6%)

Query: 93  VLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQ 151
           V  FL   E S  +VE     +    +   H L ++    V+S GS+    LG      +
Sbjct: 66  VKSFLGHAESSLALVEGLESERFIQVSATSHVLAVTLQGEVYSWGSNSYKQLGRDGVNNR 125

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH---RDTNRPIFRP 208
            +  T +       VVQV A  +H+A V ++G ++T G       GH    D N P    
Sbjct: 126 PMKITALE---GEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPT--- 179

Query: 209 RLVEALKGVPCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL 266
           R+    +G+    V  GL    +  +T  GH+++ G    G+LGHG    R  P+ I   
Sbjct: 180 RVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTNDRRRQPERID-- 237

Query: 267 EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
                +V++  G S   A++ +G +Y +G G  + LG G +    QPR           V
Sbjct: 238 ---FDIVKVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNTH--KV 292

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
           V  +   EH VA+   G V+ WG    G LG     +KT+  P
Sbjct: 293 VDCALSSEHGVAVTDRGEVFVWGANDHGQLGADAGSEKTIIAP 335



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 28/198 (14%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+S+G+  +  LG+        P+      R  ++   ++ G      +D  G +++   
Sbjct: 1   VFSWGNTRDAELGYVANQPVESPQINTLLSR--LNPTHIALGQRGTFVIDGEGRLWS--- 55

Query: 351 GYCGA-----------LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
             CG+           LGH  E    L E    L+S   +QV A      V +  G VY 
Sbjct: 56  --CGSHTRPQNDVKSFLGHA-ESSLALVE---GLESERFIQVSATSHVLAVTLQ-GEVYS 108

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +G   +  LG    GV++   RP  + +L    V Q+  G +H+  V+  G L+ +G   
Sbjct: 109 WGSNSYKQLG--RDGVNN---RPMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWGRGG 163

Query: 460 RAQLGHDTLRGCLEPTEI 477
             +LGH T      PT +
Sbjct: 164 YGRLGHGTSDDVNVPTRV 181


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 10/273 (3%)

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           L GV   QV+AG+N +  +   G+++  G N+ GQLG+   L+   P  ++  + V +  
Sbjct: 46  LPGVVFTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGV-TFT 104

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR-RKGIHVVRVSAG 332
           Q++AG  + LAV  +G  Y++G  ++  LG+G       P  +       G+ + +V AG
Sbjct: 105 QVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAG 164

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV---QVCARKRKTF 389
             H +A+ S+G +Y+WG    G LG G  +  ++P  +S+      V   QV A  R + 
Sbjct: 165 GFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSL 224

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            +   G  Y +G    G LG    G   +   P ++ +      +Q+S G  H++ V   
Sbjct: 225 AIGSNGKTYAWGEARGGQLGI---GSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSD 281

Query: 450 GRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEM 482
           G+ + +G+N+  QLG+ T    L P  + +  M
Sbjct: 282 GKAYAWGNNDSGQLGNATTTSSLAP--VLVSPM 312



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 158/372 (42%), Gaps = 21/372 (5%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           Q++ G  H+L + S+ ++++ G +  G LG+       V    ++ P      QVSA  +
Sbjct: 53  QVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPV-LVSTPDGVTFTQVSAGAD 111

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA---LKGVPCKQVTAGLNFTGF 231
           H+  V   G  +  G N+    G+  T+     P LV A     GV   QV AG    GF
Sbjct: 112 HSLAVGSDGNAYAWGRNTDGRLGN-GTSTGSSVPLLVSAGAVPSGVTISQVMAG----GF 166

Query: 232 LTI----RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAV 285
            ++     G +++ G N  GQLG G TL    P  ++       V   Q++AG  + LA+
Sbjct: 167 HSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAI 226

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             NG  Y++G      LG G       P  +      G+   +VSAGD H +A+ S G  
Sbjct: 227 GSNGKTYAWGEARGGQLGIGSISRTPAPALVSA--PAGVSFTQVSAGDLHSLAVGSDGKA 284

Query: 346 YTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
           Y WG    G LG+        P  +S +      QV A    +  +   G+ Y +G    
Sbjct: 285 YAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVN 344

Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           G LG  +  ++   + P ++ +      ++I  G  H++        + +G N   QLG+
Sbjct: 345 GQLG--NNTITTSTV-PVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGN 401

Query: 466 DTLRGCLEPTEI 477
            T  G L P  I
Sbjct: 402 GTSDGSLVPVAI 413



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%)

Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSF--TRINFPSAAHVVQVSAS 172
           Q+  G +H+L + SN  ++S G +  G LG G      V    +    P+     QVSA 
Sbjct: 160 QVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAG 219

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           + H+  +  +G+ +  G+      G    +R    P LV A  GV   QV+AG   +  +
Sbjct: 220 DRHSLAIGSNGKTYAWGEARGGQLGIGSISR-TPAPALVSAPAGVSFTQVSAGDLHSLAV 278

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G  +  G+N  GQLG+  T     P  ++P+  + +V Q++AG  + LA+  +G  Y
Sbjct: 279 GSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGL-AVTQVSAGADHSLAIGADGNAY 337

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G   N  LG+        P  +      G+   R+ AG  H +   S    YTWG   
Sbjct: 338 AWGLNVNGQLGNNTITTSTVP--VMVTAPDGVTFTRIEAGGLHSLTAASDENTYTWGANS 395

Query: 353 CGALGHGDEIDKTLPEPLS 371
            G LG+G      +P  +S
Sbjct: 396 FGQLGNGTSDGSLVPVAIS 414


>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
 gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
          Length = 538

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 16/285 (5%)

Query: 204 PIFR---PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP 260
           PIF    P  + ++K   C   ++G N    +T    V+  GSN    LG GD      P
Sbjct: 15  PIFSLLDPEFISSIKQA-CVFGSSG-NEAIVITQDDDVYALGSNCSSCLGVGDAQSGLEP 72

Query: 261 KSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
           + I  L +   V +   +GP ++L  T NG +YS+G      LG+G  +  L P+ I T 
Sbjct: 73  RKIDILCKKKIVDIGYGSGP-HVLVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITT- 130

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLA 378
              G  VV+V+ G  H +AL   G V+ WG   CG +G G   ++  P  +++ L +   
Sbjct: 131 NLIGRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKV 190

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI--LDSLRAHHVSQI 436
            ++   +  +  L+D G VYG+G+ G G LG     V + V +P    + +L+   V QI
Sbjct: 191 TEIACGQTSSMALLDNGEVYGWGYNGNGQLG-----VGNNVNQPNPCRVAALQQMIVVQI 245

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             G  H + +TD G ++ +G N   QLG       + PT+I + +
Sbjct: 246 VCGYAHAMALTDEGSVYAWGANSYGQLGTGNKANLVTPTKIALDK 290



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 29/299 (9%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           +S N A  + Q   V+  G N S C G  D    +  PR ++ L    CK+    + +  
Sbjct: 36  SSGNEAIVITQDDDVYALGSNCSSCLGVGDAQSGL-EPRKIDIL----CKKKIVDIGYGS 90

Query: 231 -----FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
                  T  G +++ G N + QLG+G T    +P+ I        VV++A G  + LA+
Sbjct: 91  GPHVLVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLAL 150

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDEHVVALDSSG 343
           T  G V+++G  +   +G G   ++  PR +      RK   V  ++ G    +AL  +G
Sbjct: 151 TLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRK---VTEIACGQTSSMALLDNG 207

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
            VY WG    G LG G+ +++  P  +++L+  + VQ+         L D GSVY +G  
Sbjct: 208 EVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGAN 267

Query: 404 GFGSLGFPDRGVSDKVLRPRI-LDSLR-----AHHVSQISTGLYHTVVVTDRGRLFGFG 456
            +G LG  ++  ++ V   +I LD  R     A H + +S+       +T  G+++ +G
Sbjct: 268 SYGQLGTGNK--ANLVTPTKIALDKGRFVEIGATHYNHVSSA------ITQTGKVYMWG 318



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 7/287 (2%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
           ++G    ++  +  V++ GS+    LG G +    +   +I+      +V +   S  H 
Sbjct: 36  SSGNEAIVITQDDDVYALGSNCSSCLGVG-DAQSGLEPRKIDILCKKKIVDIGYGSGPHV 94

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
                +G +++ G N     G+  TN+ +    +   L G    +V  G + +  LT+ G
Sbjct: 95  LVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLALTLEG 154

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V   G N  GQ+G G T ++ TP+ +A       V +IA G +  +A+  NG VY +G 
Sbjct: 155 EVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQTSSMALLDNGEVYGWGY 214

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             N  LG G   ++  P  +   ++  + VV++  G  H +AL   G VY WG    G L
Sbjct: 215 NGNGQLGVGNNVNQPNPCRVAALQQ--MIVVQIVCGYAHAMALTDEGSVYAWGANSYGQL 272

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRK--TFVLVDTGSVYGFG 401
           G G++ +   P  ++  K    V++ A      +  +  TG VY +G
Sbjct: 273 GTGNKANLVTPTKIALDKGRF-VEIGATHYNHVSSAITQTGKVYMWG 318


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 139/313 (44%), Gaps = 19/313 (6%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT 150
           + VL+F+Q            AGN++   T         N  VF  G++  G LG G +  
Sbjct: 15  QEVLKFIQQA------CVFGAGNEVLYIT--------KNDEVFVMGTNSSGCLGTG-DAQ 59

Query: 151 QCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
             +   RI+  S   +V +S  S  H   V   G+V++ G N+    G+  TN+ +   +
Sbjct: 60  SIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQ 119

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
           +   L       V  G + +  LT  G V+  G N  GQ+G G T ++P P+ +    + 
Sbjct: 120 VSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQN 179

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
            +V+ IA G    +AV  NG VY++G   N  LG G   +  QP   +    +GI V +V
Sbjct: 180 KTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVEQV 237

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKT 388
             G  H +AL   G +Y WG    G LG G++ +++ P  +   K  +  +  C     +
Sbjct: 238 VCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTS 297

Query: 389 FVLVDTGSVYGFG 401
                +G VY +G
Sbjct: 298 AAKSQSGQVYMWG 310



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 126/281 (44%), Gaps = 9/281 (3%)

Query: 204 PIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
           PIF     E LK +    V    N   ++T    V   G+N+ G LG GD      P+ I
Sbjct: 8   PIFALCPQEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRI 67

Query: 264 APLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT-FRR 321
             L     V +   +GP +++ VT +G VYS+G  +   LG+G  +  L P  + T    
Sbjct: 68  DMLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLIN 126

Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQ 380
           K  H   V+ G  H + L   G VY WG    G +G G   ++ +P  ++S L++   + 
Sbjct: 127 KKAH--SVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG 184

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
           +   +  +  +VD G VY +G+ G G LG    G      R   L  +R   V Q+  G 
Sbjct: 185 IACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VEQVVCGY 241

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            HT+ +TD G ++ +G N   QLG         P ++ + +
Sbjct: 242 AHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDK 282



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 14/267 (5%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFL 232
           N   ++ ++ +VF  G NSS C G  D  + I  PR ++ L G     ++ G       +
Sbjct: 31  NEVLYITKNDEVFVMGTNSSGCLGTGDA-QSIIEPRRIDMLSGKRIVSLSYGSGPHVVIV 89

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
           T  G V++ G N + QLG+G T    +P  ++          +A G  + + +T +G VY
Sbjct: 90  TSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVY 149

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G  ++  +G G   ++  PR + +  +    V+ ++ G    +A+  +G VY WG   
Sbjct: 150 AWGYNNSGQVGSGSTANQPIPRKVTSCLQNKT-VIGIACGQMSSMAVVDNGEVYAWGYNG 208

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG--- 409
            G LG G   ++  P  +++L+     QV      T  L D G +Y +G   +G LG   
Sbjct: 209 NGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGN 268

Query: 410 -----FPDRGVSDKVLRPRILDSLRAH 431
                +P + + DK    RI++    H
Sbjct: 269 KSNQSYPVQVIVDK---ERIVEIAACH 292


>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
          Length = 531

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 124/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD+     PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLNPVHIMVEK 283



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 6/252 (2%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S N A +V  + +VF  G N S C G  D+   +  P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLV-PKKLEALCGKKIKSLSYGSGPHVL 88

Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+++G  +   +G G   ++  PR +         VV ++ G    +A+  +G VY WG 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK-KVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G LG 
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266

Query: 411 PDRGVSDKVLRP 422
              G  + +L P
Sbjct: 267 --TGNKNNLLNP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 114/278 (41%), Gaps = 5/278 (1%)

Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQ 184
           +  N  VF  G +    LG G   +  V   ++       +  +S  S  H     + G 
Sbjct: 37  VTDNDEVFVFGMNYSNCLGTGDSQSTLVP-KKLEALCGKKIKSLSYGSGPHVLLSTEDGV 95

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G V   G N
Sbjct: 96  VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYN 155

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
             GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G   N  LG 
Sbjct: 156 NCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGL 215

Query: 305 GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
           G   ++L P  +       + V ++  G  H +AL   G +Y WG    G LG G++ + 
Sbjct: 216 GNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNL 273

Query: 365 TLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
             P  +   K  +  +  C     +      G VY +G
Sbjct: 274 LNPVHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 6/184 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQ 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 291
             G ++  G+NT+GQLG G+  +   P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLNPVHI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 292 YSFG 295
           Y +G
Sbjct: 308 YMWG 311


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 161/367 (43%), Gaps = 21/367 (5%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +Q++ G +H++ L S+ +V + G ++ G LG G  T + +    +      +V  ++   
Sbjct: 61  LQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIP---VQVKDLNNVTAIAGGA 117

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  +   G V+T G N +   G   T +   +P  V  LK +         N    L 
Sbjct: 118 WHSVALTSDGTVWTWGSNWAGQLGD-GTTKSRNKPVQVNNLKNITAIASKGLHNLA--LK 174

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
             G V T G N +GQLG G T DR TP     L    +++ IA G  + LA   +G +++
Sbjct: 175 SDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLN---TIISIAGGGYHSLAQKADGTIWT 231

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G      LG G   +   P  +   +     V  +  G +H + L ++G ++ WG    
Sbjct: 232 WGLNQYGQLGDGTITNRTIPVLVNGIK----DVSMIRCGGDHSIVLKNNGTIWIWGFNQH 287

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG     +++ P P+  LK+ + +        + +L   G+V+ +G    G LG    
Sbjct: 288 GQLGDRSTDNRSTPVPMGDLKNIMTID--GGGDHSLILKSDGTVWTWGNNENGQLGD--- 342

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
                + R   + +    +V+ I++G  H++ +   G ++ +G N   QLG  ++     
Sbjct: 343 --GTTMSRATPIQASTLSNVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSISNRST 400

Query: 474 PTEIFIQ 480
           P  + I+
Sbjct: 401 PVLVKIK 407



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 11/204 (5%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           +++Q++ G  + +A+  +G V ++G   +  LG G   D   P  ++       +V  ++
Sbjct: 59  TILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLN----NVTAIA 114

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
            G  H VAL S G V+TWG  + G LG G    +  P  +++LK+  A  + ++      
Sbjct: 115 GGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNLKNITA--IASKGLHNLA 172

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L   G+V+ +G   +G LG       +  ++ R L+++ +     I+ G YH++     G
Sbjct: 173 LKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIIS-----IAGGGYHSLAQKADG 227

Query: 451 RLFGFGDNERAQLGHDTLRGCLEP 474
            ++ +G N+  QLG  T+     P
Sbjct: 228 TIWTWGLNQYGQLGDGTITNRTIP 251


>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 26/294 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 257 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 315

Query: 226 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 316 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 375

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 339
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 376 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 433

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQV   +  T  L 
Sbjct: 434 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLT 493

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
             G+VY  G +G       DR        P +++ LR   V  I+ G   T  +
Sbjct: 494 CLGTVYTMGRLG----DTEDRN------SPAVVEELRYRQVESIACGSGFTAAI 537



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY FG+       +G Q D L P+ +++     + V  +S G +H   +   G V+ WG+
Sbjct: 230 VYRFGNQ------NGMQSDALLPKLLESTTM--LDVREISLGGKHAALVTKHGEVFCWGE 281

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G  G LGH   +D   P+ + SL   L   V   + +T  L  +G +Y +G  G G    
Sbjct: 282 GSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLV 341

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
            +R    + +  R+   L    +S ++ G +H  +V+  G+LF +GD     LGH  L  
Sbjct: 342 GERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLES 401

Query: 471 CLEPTEI 477
             +P E+
Sbjct: 402 ISQPKEV 408



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V +I+ G  +   VT +G V+ +G GS   LGH    D   P+ +++    G+ V  VS 
Sbjct: 257 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESL--TGVLVKSVSC 314

Query: 332 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           G+    AL  SG +YTWG    G   +G   +  + +P  LS   +  ++   A      
Sbjct: 315 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 374

Query: 390 VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 446
            +V T G ++ +G   FG LG    G  + + +P+ ++SL    V   + G +HT  +  
Sbjct: 375 AIVSTSGQLFTYGDGTFGVLG---HGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVE 431

Query: 447 --TDR-------GRLFGFGDNERAQLGHDTLRGCLEPT 475
              DR       G+LF +GD ++ +LGH      L PT
Sbjct: 432 VRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 469



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 18/262 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+L+E+   +  ++++ G      +T  G V   G  + G+LGH   +D   PK +  L 
Sbjct: 246 PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLT 305

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCL-GHGEQHDELQPRAIQTFRRKGIH 325
            V  V  ++ G     A+T +G +Y++G +GS   L G   +  +  P  + +    G  
Sbjct: 306 GV-LVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRL-SGPLNGTS 363

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---------- 375
           +  V+ G+ H+  + +SG ++T+G G  G LGHG     + P+ + SL            
Sbjct: 364 ISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGP 423

Query: 376 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
            H A  V  R  +       G ++ +G    G LG  D+   ++ L P  +  L  H   
Sbjct: 424 WHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQ---ERKLLPTCVAQLVDHDFV 480

Query: 435 QISTGLYHTVVVTDRGRLFGFG 456
           Q+S G   TV +T  G ++  G
Sbjct: 481 QVSCGRMLTVGLTCLGTVYTMG 502



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 24/182 (13%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 163
           +  G +H  ++S S  +F+ G    GVLGHG       P+  + +S   +   +      
Sbjct: 367 VACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHT 426

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V A  +   F  + G++FT GD      GH D  R +  P  V  L      QV+
Sbjct: 427 AAIVEVRA--DRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLL-PTCVAQLVDHDFVQVS 483

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G   T  LT  G V+T G         GDT DR +P  +  L     V  IA G  +  
Sbjct: 484 CGRMLTVGLTCLGTVYTMGR-------LGDTEDRNSPAVVEEL-RYRQVESIACGSGFTA 535

Query: 284 AV 285
           A+
Sbjct: 536 AI 537


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
           of chromosome condensation (RCC1) domains and a PF|01363
           FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1006

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 149/321 (46%), Gaps = 30/321 (9%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  +S    HAA V + G+VF  G+ +S   G +  N  I  P+ VE+L+ V  + V   
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLK-VNIDIDHPKRVESLEDVAVRSVACS 352

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-----TPKSIAPLEEVGSVVQIAAGPS 280
            + T  +T  G ++  G +       G T+++      T K    L    +V+ +A G  
Sbjct: 353 DHQTCAVTESGELYLWGID-------GGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAW 405

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL- 339
           +   VT +G ++++GSG+   LGHG      +P+ +++ RR  + V+ VS G  H  A+ 
Sbjct: 406 HTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRR--MKVISVSCGPWHTAAIV 463

Query: 340 -----------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKT 388
                       S G ++TWG G  G LGH D   K +P  ++ L  H  ++V      T
Sbjct: 464 ETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLT 523

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
             L  +G+VY  G    G LG P     DK +   +L +L    V  I++G +H  V+T 
Sbjct: 524 VALSISGTVYTMGSSIHGQLGCPR--AKDKSVNV-VLGNLTRQFVKDIASGSHHVAVLTS 580

Query: 449 RGRLFGFGDNERAQLGHDTLR 469
            G ++ +G     QLG   +R
Sbjct: 581 FGNVYTWGKGMNGQLGLGDVR 601



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 19/220 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V+ V+    H A V  SGQ+FT G  +    GH  +   + +P+ VE+L+ +    V+ G
Sbjct: 397 VLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGH-GSLESVTKPKEVESLRRMKVISVSCG 455

Query: 226 ----------LNFTGFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
                      N   F   +  G + T G    G+LGH D+  +  P  +  L +    +
Sbjct: 456 PWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELID-HDFI 514

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
           +++ G +  +A++ +G VY+ GS  +  LG     D+     +    R+   V  +++G 
Sbjct: 515 KVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQ--FVKDIASGS 572

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP---EPL 370
            HV  L S G VYTWGKG  G LG GD  D+  P   EPL
Sbjct: 573 HHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPL 612



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 14/215 (6%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGP-----ETTQCVSFTRINFPSAA---- 164
           + +  G +HT ++++S  +F+ GS   GVLGHG      +  +  S  R+   S +    
Sbjct: 398 LSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPW 457

Query: 165 HVVQVSASENHAAF--VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
           H   +  + N   F      G++FT GD      GH D+ R +  P  V  L      +V
Sbjct: 458 HTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLV-PTCVTELIDHDFIKV 516

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
           + G   T  L+I G V+T GS+ HGQLG     D+     +  L     V  IA+G  ++
Sbjct: 517 SCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTR-QFVKDIASGSHHV 575

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
             +T  G VY++G G N  LG G+  D   P  ++
Sbjct: 576 AVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVE 610



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 20/217 (9%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V  I+ G  +   VT  G V+ +G+G++  LG     D   P+ +++   + + V  V+ 
Sbjct: 294 VQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESL--EDVAVRSVAC 351

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
            D    A+  SG +Y WG         G + + + + + L    + L+V   A    T +
Sbjct: 352 SDHQTCAVTESGELYLWGIDGGTIEQSGSQFLTRKISDVLGGSLTVLSVACGAWH--TAI 409

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV---- 446
           +  +G ++ +G   FG LG    G  + V +P+ ++SLR   V  +S G +HT  +    
Sbjct: 410 VTSSGQLFTYGSGTFGVLG---HGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETA 466

Query: 447 TDR--------GRLFGFGDNERAQLGHDTLRGCLEPT 475
            DR        G+LF +GD ++ +LGH   +  L PT
Sbjct: 467 NDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPT 503



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 8/185 (4%)

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G+ +    G   Q+D L P+ +++       V  +S G +H   +   G V+ WG G  
Sbjct: 264 WGAITGLIDGSKNQNDALSPKLLESATM--FDVQSISLGAKHAALVTRQGEVFCWGNGNS 321

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LG    ID   P+ + SL+      V     +T  + ++G +Y +G  G    G  ++
Sbjct: 322 GKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG----GTIEQ 377

Query: 414 GVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
             S  + R +I D L     V  ++ G +HT +VT  G+LF +G      LGH +L    
Sbjct: 378 SGSQFLTR-KISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVT 436

Query: 473 EPTEI 477
           +P E+
Sbjct: 437 KPKEV 441


>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  +   +  +
Sbjct: 58  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 108

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 109 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 168

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 169 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 228

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 287 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 122/253 (48%), Gaps = 7/253 (2%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 289
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 65  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATT-EG 123

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 124 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 182

Query: 350 KGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
               G +G G  +++ +P  ++  L++ + V +   +     +VDTG VY +G+ G G L
Sbjct: 183 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 242

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
           G  + G      R   L  +R   V +++ G  HT+V+TD G+++ +G N   QLG    
Sbjct: 243 GLGNSGNQPTPCRVAALQGIR---VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 299

Query: 469 RGCLEPTEIFIQE 481
                PT + +++
Sbjct: 300 SNQSYPTPVTVEK 312



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 118

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 237

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 149/341 (43%), Gaps = 23/341 (6%)

Query: 130 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA--HVVQVSASENHAAFVLQSGQV-- 185
           S V++ G +  G LG+G  T       R+ F  A    + +V     H   +   G V  
Sbjct: 8   SLVWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLG 67

Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNT 245
           F  G       G+ D++     P+ V  L G    ++ AGL  +  LT  G ++  G N 
Sbjct: 68  FGNGVKGQLGIGNTDSHS---NPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDNL 124

Query: 246 HGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
            GQLG  H  T    TP+ + PL     + Q+A G  +   +T +G ++ FG+  +  LG
Sbjct: 125 SGQLGLGHNFTAKEQTPQKVPPLGRA-KITQLACGQDHTAVLTSSGELFMFGNNRDGALG 183

Query: 304 HGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
                +E  P      +     KG HVV++  G +H VAL ++G VY WG+   G LG G
Sbjct: 184 VAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTG 243

Query: 360 DEIDKTLP----EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           D  ++  P    +PLS+ K    + V    + T  + D   VYGFG    G LG   RGV
Sbjct: 244 DTQNRYTPSLVCKPLSAFK---CIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGV 300

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
              V  P  +  L    V     G +HT++ T  G  +  G
Sbjct: 301 IVPV--PTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQYIMG 339



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 112/241 (46%), Gaps = 17/241 (7%)

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP------LEEVGSVVQIAAGPSYMLAVTGN 288
           R  V   G N+ GQLG+G     PT  S  P      L     + ++  G  +  A+T +
Sbjct: 7   RSLVWAVGGNSKGQLGNG----TPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSD 62

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V  FG+G    LG G       P+ +     KG  VV+++AG EH +AL  SG +Y +
Sbjct: 63  GDVLGFGNGVKGQLGIGNTDSHSNPQRVHLLSGKG--VVKMAAGLEHSLALTESGDLYAF 120

Query: 349 GKGYCG--ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           G    G   LGH     +  P+ +  L      Q+   +  T VL  +G ++ FG    G
Sbjct: 121 GDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDG 180

Query: 407 SLGFP---DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
           +LG     + G       P+++  L+  HV QI  GL HTV +T  G ++ +G+N R QL
Sbjct: 181 ALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQL 240

Query: 464 G 464
           G
Sbjct: 241 G 241



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 131/291 (45%), Gaps = 17/291 (5%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT---AGLNFTGFLTIRGHVHTC 241
           V+  G NS    G+    +  F P  V A +  P +++     G   T  LT  G V   
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRV-AFQLAPTQRIAEVFCGYEHTFALTSDGDVLGF 68

Query: 242 GSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG--SN 299
           G+   GQLG G+T     P+ +  L   G VV++AAG  + LA+T +G +Y+FG      
Sbjct: 69  GNGVKGQLGIGNTDSHSNPQRVHLLSGKG-VVKMAAGLEHSLALTESGDLYAFGDNLSGQ 127

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG-- 357
             LGH     E  P+ +    R    + +++ G +H   L SSG ++ +G    GALG  
Sbjct: 128 LGLGHNFTAKEQTPQKVPPLGRA--KITQLACGQDHTAVLTSSGELFMFGNNRDGALGVA 185

Query: 358 ----HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
                G  I  + P+ ++ LK    VQ+    + T  L   G VY +G  G G LG  D 
Sbjct: 186 GHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQLGTGD- 244

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
              ++     +   L A     ++ G  HT+ VTD   ++GFG +   QLG
Sbjct: 245 -TQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLG 294



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 111/242 (45%), Gaps = 8/242 (3%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPE-TTQCVSFTRINFPSAAHVVQVSAS 172
           +++  G  H+L ++ S  +++ G +L G LG G   T +  +  ++     A + Q++  
Sbjct: 99  VKMAAGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACG 158

Query: 173 ENHAAFVLQSGQVFTCGDNSSFC---CGHRDTNRPIFR--PRLVEALKGVPCKQVTAGLN 227
           ++H A +  SG++F  G+N        GH +   PI    P+LV  LKG    Q+  GL 
Sbjct: 159 QDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQ 218

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            T  LT  G V+  G N  GQLG GDT +R TP  +         + +A G  + +AVT 
Sbjct: 219 HTVALTAAGGVYCWGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTD 278

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
              VY FGS  +  LG G +   + P   +  R  G  V     G  H +    +G  Y 
Sbjct: 279 CDDVYGFGSDRHGQLGLG-RRGVIVPVPTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQYI 337

Query: 348 WG 349
            G
Sbjct: 338 MG 339


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 144/317 (45%), Gaps = 22/317 (6%)

Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
           PS   +   S  EN    V ++ +V+  G NSS         + I +P+L  A      +
Sbjct: 356 PSPVPIDDSSTGEN-GNMVTENSEVYVWGSNSSHQLAEGSQEK-ILQPKLSPAFANA--Q 411

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
            + AG   T  +   G V  CG  ++G+LG GD+ ++ T K +   +    + +I++   
Sbjct: 412 TIEAGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLN-FDHRYVIRKISSSKG 470

Query: 281 ---YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
              + LA+T +G V+S+G G    LGHG    +  P+ IQ    +G  V  +SAG  H  
Sbjct: 471 SDGHTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQG-ALQGKVVKSISAGYRHSA 529

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKT---------LPEPLSSLKSHLAVQVCARKRKT 388
           A+   G ++TWG+G  G LGHGD   K           P+ + +L      +VC   + +
Sbjct: 530 AVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSS 589

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
             L  TG ++ +G       G P+       LRP++++ L    +  ++ G  H + +T 
Sbjct: 590 LALTSTGQLFAWGCGACLGCGSPE----STALRPKLVEELANTRIVDVACGDSHCLALTH 645

Query: 449 RGRLFGFGDNERAQLGH 465
              ++ +G+N   Q G 
Sbjct: 646 DNEVYAWGNNAMGQCGQ 662



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 155/350 (44%), Gaps = 29/350 (8%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
           +TG    ++  NS V+  GS+    L  G +  + +   +++ P+ A+   + A +    
Sbjct: 365 STGENGNMVTENSEVYVWGSNSSHQLAEGSQ--EKILQPKLS-PAFANAQTIEAGQYCTF 421

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF---LTI 234
            V   G V  CG  S    G  D+N      +L    + V  +++++     G    LT 
Sbjct: 422 VVYSDGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYV-IRKISSSKGSDGHTLALTA 480

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V + G   +G+LGHG++  +  PK I    +   V  I+AG  +  AVT +G ++++
Sbjct: 481 DGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTW 540

Query: 295 GSG---------SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           G G         SN  LGHG+ +   +P+ I+     G+++ +V  G +  +AL S+G +
Sbjct: 541 GEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEAL--VGLYIRKVCCGSQSSLALTSTGQL 598

Query: 346 YTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           + WG G C  LG G      L P+ +  L +   V V         L     VY +G   
Sbjct: 599 FAWGCGAC--LGCGSPESTALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNA 656

Query: 405 FGSLGFPDRGVSDK-VLRPRILDSLRAHHVSQISTGLYH----TVVVTDR 449
            G  G   +G S   + +P+ +  L    V QIS G  H    T + TDR
Sbjct: 657 MGQCG---QGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLAWTALPTDR 703


>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
          Length = 627

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 13/270 (4%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           V+  G NSS       T+  I +P+LV     V  +Q+ AG   T  +   G V  CG  
Sbjct: 360 VYAWGSNSSHQLA-EGTSEKILQPKLVTNFPKV--QQLEAGQYCTFVIDNDGAVSACGKG 416

Query: 245 THGQLGHGDTLDRPTPKSIA--PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
           ++G+LG GD+ ++  PK ++      V  +        + LA+T  G ++S+G G    L
Sbjct: 417 SYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDYGKL 476

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           GHG    +  P+ IQ     G  V  + AG  H  A+   G +YTWG+G  G LGHGD  
Sbjct: 477 GHGNISTQKYPKLIQG-PLAGKVVKCICAGYRHSAAVTEDGQLYTWGEGDFGRLGHGDNS 535

Query: 363 DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP 422
            + +P  +  + S++    C       V  D  +V+ F   G G LGF D   +++V RP
Sbjct: 536 GRNVPTLVKDI-SNVGQVACGSSHTIAVSQDGRTVWTF---GGGKLGFED---ANRVYRP 588

Query: 423 RILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
           +++D+    ++ +++ G + ++ +T  G++
Sbjct: 589 KVVDAFAGLYIRKVACGSHSSLALTSSGQV 618



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 16/236 (6%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS-- 172
           Q+  G+Y T +I N  +V +CG    G LG G  + Q  +  +++F +   V ++S+S  
Sbjct: 393 QLEAGQYCTFVIDNDGAVSACGKGSYGRLGLGDSSNQ-TAPKKLSFDATHLVKKISSSKG 451

Query: 173 -ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTG 230
            + H   +   G +F+ GD      GH + +   + P+L++  L G   K + AG   + 
Sbjct: 452 SDGHTLALTVEGALFSWGDGDYGKLGHGNISTQKY-PKLIQGPLAGKVVKCICAGYRHSA 510

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG- 289
            +T  G ++T G    G+LGHGD   R  P  +  +  VG   Q+A G S+ +AV+ +G 
Sbjct: 511 AVTEDGQLYTWGEGDFGRLGHGDNSGRNVPTLVKDISNVG---QVACGSSHTIAVSQDGR 567

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
            V++FG G    LG  + +   +P+ +  F   G+++ +V+ G    +AL SSG V
Sbjct: 568 TVWTFGGGK---LGFEDANRVYRPKVVDAF--AGLYIRKVACGSHSSLALTSSGQV 618



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
           VVY++GS S+  L  G     LQP+ +  F +    V ++ AG      +D+ G V   G
Sbjct: 359 VVYAWGSNSSHQLAEGTSEKILQPKLVTNFPK----VQQLEAGQYCTFVIDNDGAVSACG 414

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK---TFVLVDTGSVYGFGWMGFG 406
           KG  G LG GD  ++T P+ LS   +HL  ++ + K     T  L   G+++ +G   +G
Sbjct: 415 KGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDYG 474

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  +  +S +     I   L    V  I  G  H+  VT+ G+L+ +G+ +  +LGH 
Sbjct: 475 KLGHGN--ISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQLYTWGEGDFGRLGHG 532

Query: 467 TLRGCLEPTEI 477
              G   PT +
Sbjct: 533 DNSGRNVPTLV 543


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 127/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 29  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACL 79

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 80  SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYH 139

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T ++P P+ +    +   VV IA G    +AV   
Sbjct: 140 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNT 199

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   ++  P  I     +GI V RV+ G  H + L   G VY W
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGNQPTPCRISAL--QGIRVQRVACGYAHTLVLTDEGQVYAW 257

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P+   K   + +  C     +      G VY +G
Sbjct: 258 GANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 311



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 10/265 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLMPCHIST-N 124

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V  V+ G  H + L S G V+ WG    G +G G   ++ +P  ++  L++ + V
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVV 184

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +V+TG VY +G+ G G LG    G      R   L  +R   V +++ G
Sbjct: 185 NIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR---VQRVACG 241

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLG 464
             HT+V+TD G+++ +G N   QLG
Sbjct: 242 YAHTLVLTDEGQVYAWGANSYGQLG 266



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 32  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 89

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V ++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 149

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+ ++G VY WG  
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVNTGEVYVWGYN 208

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G   ++  P  +S+L+     +V      T VL D G VY +G   +G LG
Sbjct: 209 GNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 266


>gi|291406745|ref|XP_002719686.1| PREDICTED: NIMA-related kinase 8-like [Oryctolagus cuniculus]
          Length = 978

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTICVTDEGQLYAFGSDYYGCMGMDKIAGPEVLEPMQLNFF 477

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
              G  V +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 L--GNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 429
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 40/307 (13%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGH----GPETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF     V QVS
Sbjct: 430 QVSCGDDFTICVTDEGQLYAFGSDYYGCMGMDKIAGPEVLEPM---QLNFFLGNPVEQVS 486

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 273
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 334 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 387 KTFVLVD 393
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 426 KAIRQVSCGDDFTICVTDEGQLYAFGSDYYGCMGM-DKIAGPEVLEPMQLNFFLGNPVEQ 484

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 130/332 (39%), Gaps = 22/332 (6%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTICVTDEGQLYAFGSDYYGC 457

Query: 196 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
            G      P +  P  +    G P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGMDKIAGPEVLEPMQLNFFLGNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 255 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 305
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 306 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 365 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 417
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTICVTD 443

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEV----GSVVQIAAGPSYMLAVTGNG 289
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----MDKIAGPEVLEPMQLNFFLGNPVEQVSCGDNHVVVLTRNK 499

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 350 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 396
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 456 GDNERAQLGHDTLRGCLEPTE 476
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 395
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 341 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 388

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   T+ VTD G+L+
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTICVTDEGQLY 448

Query: 454 GFGDNERAQLGHDTLRG--CLEPTEI 477
            FG +    +G D + G   LEP ++
Sbjct: 449 AFGSDYYGCMGMDKIAGPEVLEPMQL 474


>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Ailuropoda melanoleuca]
          Length = 348

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHS--VCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
           rubripes]
          Length = 527

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 130/275 (47%), Gaps = 5/275 (1%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 187
           N  VF+ G++  G LG G +    +   RI+      +V +S  +  H A     G+VF+
Sbjct: 40  NDEVFALGTNCSGCLGLG-DLQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATADGEVFS 98

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
            G N     G+  +   +    +   L G    +V  G + T  LT  G V   G N  G
Sbjct: 99  WGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSG 158

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
           Q+G G T ++PTP+ ++   +   VV IA G    +AV  +G +Y +G   N  LG G  
Sbjct: 159 QVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNN 218

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            ++  P  I     +G++V++V+ G  H +AL   G+VY+WG    G LG G++ ++ +P
Sbjct: 219 GNQQTPCRIAAL--QGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAVP 276

Query: 368 EPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
             +++ K  ++ V  C     +     +G V  +G
Sbjct: 277 TLINTEKERMSEVAACHTSHTSAAKTQSGQVLMWG 311



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 9/237 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T+   V   G+N  G LG GD      P+ I  L  +++ S+     GP   +A T +
Sbjct: 36  YVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSL-SYGTGPHVAIA-TAD 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V+S+G      LG+G     L P  + T    G  V+ V+ G  H +AL + G V+ W
Sbjct: 94  GEVFSWGHNGYSQLGNGTSTHGLTPALVST-NLLGKRVIEVACGSHHTIALTTDGEVFAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G +G G   ++  P  +SS L++ + V +   +  +  ++D+G +YG+G+   G 
Sbjct: 153 GYNNSGQVGSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYNCNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           LG  + G      R   + +L+  +V Q++ G  HT+ +TD G ++ +G N   QLG
Sbjct: 213 LGLGNNGNQQTPCR---IAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLG 266



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FT 229
           ++ N A +V  + +VF  G N S C G  D    I  PR ++ L G     ++ G     
Sbjct: 29  SAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTI-EPRRIDVLCGKKIVSLSYGTGPHV 87

Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
              T  G V + G N + QLG+G +    TP  ++       V+++A G  + +A+T +G
Sbjct: 88  AIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIALTTDG 147

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  SG +Y WG
Sbjct: 148 EVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKV-VVNIACGQLCSMAVLDSGEIYGWG 206

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               G LG G+  ++  P  +++L+    +QV      T  L D G VY +G   +G LG
Sbjct: 207 YNCNGQLGLGNNGNQQTPCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLG 266



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 4/233 (1%)

Query: 119 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           TG +  +  ++  VFS G +    LG+G  T                V++V+   +H   
Sbjct: 83  TGPHVAIATADGEVFSWGHNGYSQLGNGTSTHGLTPALVSTNLLGKRVIEVACGSHHTIA 142

Query: 179 VLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
           +   G+VF  G N+S   G   T N+P  R R+   L+      +  G   +  +   G 
Sbjct: 143 LTTDGEVFAWGYNNSGQVGSGSTANQPTPR-RVSSCLQNKVVVNIACGQLCSMAVLDSGE 201

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           ++  G N +GQLG G+  ++ TP  IA L+ V +V+Q+A G ++ +A+T  G VYS+G+ 
Sbjct: 202 IYGWGYNCNGQLGLGNNGNQQTPCRIAALQGV-NVIQVACGYAHTIALTDEGFVYSWGAN 260

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           S   LG G + ++  P  I T + +   V           A   SG V  WG+
Sbjct: 261 SYGQLGTGNKCNQAVPTLINTEKERMSEVAACHTSHTS-AAKTQSGQVLMWGQ 312


>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 657

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 138/282 (48%), Gaps = 9/282 (3%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           ++  V ++ +VF  G NSS       +   I  P++  A+     +Q+ AG   T  ++ 
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLA-EGSQEKILLPKM--AISFAESQQIEAGQYCTFVISS 423

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVYS 293
            G V  CG  ++G+LG GD+ ++   K +     + + +  + G   + LA+T  G V+S
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFS 483

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G G    LGHG    +  P+ I      G  VV +SAG  H   +   G +YTWG+G  
Sbjct: 484 WGDGDYGKLGHGNTLTQKYPKVILGVLM-GKVVVCISAGYRHSACVTDDGQLYTWGEGDY 542

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LGHGD   + +P  +  + S++   VC       V  D+ +V+ FG    G LG  D 
Sbjct: 543 GRLGHGDSNSRNVPTLVKDV-SNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGD- 600

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
             ++++ +P+I++SL    + ++  G   ++ +T  G+L  F
Sbjct: 601 --TNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCTF 640



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 131/284 (46%), Gaps = 12/284 (4%)

Query: 121 RYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           + ++L++S NS VF  GS+    L  G +    +    I+F   A   Q+ A + +  FV
Sbjct: 365 KPNSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISF---AESQQIEAGQ-YCTFV 420

Query: 180 LQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFLTIRGH 237
           + S G V  CG  S    G  D+N      +L      +     + G +  T  LT  G 
Sbjct: 421 ISSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQ 480

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V + G   +G+LGHG+TL +  PK I  +     VV I+AG  +   VT +G +Y++G G
Sbjct: 481 VFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGAL 356
               LGHG+ +     R + T  +   +V +V  G  H +A+   S  V+++G G  G L
Sbjct: 541 DYGRLGHGDSNS----RNVPTLVKDVSNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKL 596

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           GHGD      P+ + SL      +V    + +  L  TG +  F
Sbjct: 597 GHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCTF 640



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 12/187 (6%)

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
           L V+ N  V+ +GS S+  L  G Q   L P+   +F        ++ AG      + S 
Sbjct: 369 LVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISFAESQ----QIEAGQYCTFVISSD 424

Query: 343 GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK---TFVLVDTGSVYG 399
           G V   GKG  G LG GD  ++T  + L+   + +  ++ + K     T  L   G V+ 
Sbjct: 425 GSVRACGKGSYGRLGLGDSNNQTQLKKLN-FDNSIITRISSSKGSDGHTLALTSEGQVFS 483

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPR-ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           +G   +G LG    G +     P+ IL  L    V  IS G  H+  VTD G+L+ +G+ 
Sbjct: 484 WGDGDYGKLG---HGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540

Query: 459 ERAQLGH 465
           +  +LGH
Sbjct: 541 DYGRLGH 547


>gi|329927260|ref|ZP_08281541.1| hypothetical protein HMPREF9412_2305 [Paenibacillus sp. HGF5]
 gi|328938563|gb|EGG34947.1| hypothetical protein HMPREF9412_2305 [Paenibacillus sp. HGF5]
          Length = 1058

 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 177/398 (44%), Gaps = 28/398 (7%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQ-CVSFTRINFPSA------- 163
           N + I++  YHTL L+ N +V S GS++ G LG+G +      SF +  + +        
Sbjct: 19  NIVSISSKGYHTLALLDNGTVLSWGSNMVGQLGNGKQGLNFSTSFAQPVYENVNGELKVL 78

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A++V V AS+ ++  +   G V+  G N+S   G R      + P  +      P +Q++
Sbjct: 79  ANIVAVEASQQYSLALSADGTVYGWGLNASNELG-RPFEGTYYYPTAISIAGLPPIEQIS 137

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHG---DTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
           AG+     L   G V   G N  G +G+G   + ++RP        E +  + QI AG  
Sbjct: 138 AGVTHAAALAKDGTVWAWGDNQSGAVGNGRQMEYVERPVQVKKNASEFLTGIKQIHAGNW 197

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVAL 339
           + +AVT NG +  +G    + LG         P  A+   +     + +VS G+++ +AL
Sbjct: 198 FTMAVTENGELLGWGYNGAYQLGDLTLVSHSYPVHALDKNKNPLNGIKKVSTGNDYTLAL 257

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTL---PEPLSSLKSHLA----VQVCARKRKTFVLV 392
              G + +WG    G LG  D +  T    P+P+    S  A    V + A       + 
Sbjct: 258 KEDGTLLSWGVNGYGQLGS-DTLQGTYSNYPKPVLDKASGDAFGHVVDISAGIAHVAAIR 316

Query: 393 DTGSVYGFG----WMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVT 447
           + GSV+ +G    W      G   RG      RP  +  L  +  V Q  TG +HTV++ 
Sbjct: 317 EDGSVWTWGGNTIWGSADITGQLGRGDDRLEERPGRVTRLPGNAKVLQAETGGHHTVIML 376

Query: 448 DRGRLFGFGDNERAQLGHDTLRG-CLEPTEIFIQEMEE 484
           D G L+  G N   QLG     G  +EPT++ +   ++
Sbjct: 377 DNGTLWSMGSNREKQLGGGYKMGSAIEPTQLSLSHYDK 414



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 135/306 (44%), Gaps = 55/306 (17%)

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI----RGHVHTCGSNTHGQLG 250
             GH DT +            G+P +     ++  G+ T+     G V + GSN  GQLG
Sbjct: 3   TTGHADTGK-----------AGLPGETNIVSISSKGYHTLALLDNGTVLSWGSNMVGQLG 51

Query: 251 HGD-------TLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
           +G        +  +P  +++   L+ + ++V + A   Y LA++ +G VY +G  ++  L
Sbjct: 52  NGKQGLNFSTSFAQPVYENVNGELKVLANIVAVEASQQYSLALSADGTVYGWGLNASNEL 111

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI 362
           G   +     P AI       I   ++SAG  H  AL   G V+ WG    GA+G+G ++
Sbjct: 112 GRPFEGTYYYPTAISIAGLPPIE--QISAGVTHAAALAKDGTVWAWGDNQSGAVGNGRQM 169

Query: 363 D---------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---- 409
           +         K   E L+ +K     Q+ A    T  + + G + G+G+ G   LG    
Sbjct: 170 EYVERPVQVKKNASEFLTGIK-----QIHAGNWFTMAVTENGELLGWGYNGAYQLGDLTL 224

Query: 410 ----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
               +P   + DK   P        + + ++STG  +T+ + + G L  +G N   QLG 
Sbjct: 225 VSHSYPVHAL-DKNKNP-------LNGIKKVSTGNDYTLALKEDGTLLSWGVNGYGQLGS 276

Query: 466 DTLRGC 471
           DTL+G 
Sbjct: 277 DTLQGT 282


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 127/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 53  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T ++P P+ +    +   VV IA G    +AV   
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNT 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   ++  P  I     +GI V RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRISAL--QGIRVQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P+   K   + +  C     +      G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 335



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 10/265 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLMPCHIST-N 148

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V  V+ G  H + L S G V+ WG    G +G G   ++ +P  ++  L++ + V
Sbjct: 149 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVV 208

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +V+TG VY +G+ G G LG    G      R   L  +R   V +++ G
Sbjct: 209 NIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR---VQRVACG 265

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLG 464
             HT+V+TD G+++ +G N   QLG
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLG 290



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 113

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V ++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+ ++G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVNTGEVYVWGYN 232

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G   ++  P  +S+L+     +V      T VL D G VY +G   +G LG
Sbjct: 233 GNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
           latipes]
          Length = 531

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 131/284 (46%), Gaps = 8/284 (2%)

Query: 201 TNRPIFRPRLVEALKGVPCKQVT-AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT 259
           T  PIF    +E L  +    V  +  N   ++T    V   G N    LG GD+     
Sbjct: 5   TKWPIFSLMGLEELSMIRKACVFGSSANEAVYVTHDDEVFVLGLNCSNCLGTGDSQSTIV 64

Query: 260 PKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT 318
           PK +  L     V +   +GP  ++A T +G ++++G      LG+G  +  + P  +  
Sbjct: 65  PKKLDFLNGRKIVSLSYGSGPHVLMA-TEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSA 123

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHL 377
                  VV V+ G  H +AL  SG VY WG   CG +G G   ++  P  +SS L++ +
Sbjct: 124 -NMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKV 182

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 437
           AV +   +  +  +VD G VYG+G+ G G LG  + G     L P  L +L+   V QI 
Sbjct: 183 AVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNG---NQLTPCRLVALQGLCVLQIV 239

Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            G  H + ++D G L+ +G N   QLG       L P +I  ++
Sbjct: 240 CGYAHCLALSDEGVLYAWGSNTYGQLGTGNKSNQLSPVQIMSEK 283



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 127/276 (46%), Gaps = 7/276 (2%)

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFT 187
           +  VF  G +    LG G   +  V   +++F +   +V +S  S  H     + G++F 
Sbjct: 40  DDEVFVLGLNCSNCLGTGDSQSTIVP-KKLDFLNGRKIVSLSYGSGPHVLMATEDGELFA 98

Query: 188 CGDNSSFCCGHRDTNRPIFRPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
            G N     G+  TN+ +  P LV A +      +V  G + +  LT  G V+  G N  
Sbjct: 99  WGHNGYSQLGNGTTNQGV-APVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNC 157

Query: 247 GQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           GQ+G G T ++PTP+ ++   +    V I  G +  LAV  NG VY +G   N  LG G 
Sbjct: 158 GQVGSGSTANQPTPRRVSSCLQNKVAVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGN 217

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
             ++L P  +     +G+ V+++  G  H +AL   G +Y WG    G LG G++ ++  
Sbjct: 218 NGNQLTPCRLVAL--QGLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLGTGNKSNQLS 275

Query: 367 PEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
           P  + S K  +  V  C     +     +G VY +G
Sbjct: 276 PVQIMSEKERIVEVAACHSTHTSAAKTQSGQVYMWG 311



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 7/288 (2%)

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           +S N A +V    +VF  G N S C G  D+   I  P+ ++ L G     ++ G     
Sbjct: 29  SSANEAVYVTHDDEVFVLGLNCSNCLGTGDSQSTIV-PKKLDFLNGRKIVSLSYGSGPHV 87

Query: 231 FL-TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
            + T  G +   G N + QLG+G T     P  ++       VV++A G  + +A+T +G
Sbjct: 88  LMATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSG 147

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VY++G  +   +G G   ++  PR + +  +  +  V +  G    +A+  +G VY WG
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNKV-AVGIVCGQTSSLAVVDNGEVYGWG 206

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
               G LG G+  ++  P  L +L+    +Q+         L D G +Y +G   +G LG
Sbjct: 207 YNGNGQLGLGNNGNQLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLG 266

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-TDRGRLFGFG 456
               G     L P  + S +   V   +    HT    T  G+++ +G
Sbjct: 267 ---TGNKSNQLSPVQIMSEKERIVEVAACHSTHTSAAKTQSGQVYMWG 311


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  +   +  +
Sbjct: 53  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VDTG VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 113

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 232

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|351712501|gb|EHB15420.1| Serine/threonine-protein kinase Nek9 [Heterocephalus glaber]
          Length = 712

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 19/273 (6%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G    QV AG+     +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 283 PQKLDVIKSGCSSWQVCAGITHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 342

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 343 HVEKLQG-KAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGSEVLEPMQLNFF 401

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 402 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEHGRLGLDSEEDYYTPQRVDVPKALIIV 459

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRILDS------LRAH 431
            V      TF+L  +G V   G   F  LG      G+ +      +  S      L  +
Sbjct: 460 AVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPTSFTLAKQLSFY 519

Query: 432 HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 520 KIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 552



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 126/302 (41%), Gaps = 32/302 (10%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 173
           Q++ G   T+ +++   +++ GS   G +G      ++ +   ++NF  +  V QVS  +
Sbjct: 354 QVSCGEDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGSEVLEPMQLNFFLSNPVEQVSCGD 413

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 414 NHVVVLTRNKEVYSWG------CGEHGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGSDG 467

Query: 229 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
           T  LT  G V  CG N   +LG          H    + PT  ++A       +  IA G
Sbjct: 468 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPTSFTLAKQLSFYKIRTIAPG 527

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            ++  A+   G + +FG      LG G     L    +      G  V+RVS GDE  +A
Sbjct: 528 KTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIA 586

Query: 339 LDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
                +++ WG G  G L        HG +I  + P P+     H+    C R   T ++
Sbjct: 587 ATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTILI 645

Query: 392 VD 393
           V+
Sbjct: 646 VE 647



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/330 (23%), Positives = 130/330 (39%), Gaps = 20/330 (6%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G+ L G LGHG + +       +       + QVS  E+    V   GQ++  G +   C
Sbjct: 323 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGC 381

Query: 196 CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
            G  +     +  P  +      P +QV+ G N    LT    V++ G   HG+LG    
Sbjct: 382 IGVDKIAGSEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEHGRLGLDSE 441

Query: 255 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCLGHGEQHD 309
            D  TP+ +  P   +   VQ  +  +++L  +G  +          G N C+     H+
Sbjct: 442 EDYYTPQRVDVPKALIIVAVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 501

Query: 310 ELQ--PRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL 366
                P +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +  
Sbjct: 502 AYHEVPTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 561

Query: 367 PEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSDKV 419
              L   L     ++V      T    D   ++ +G  G G L            +    
Sbjct: 562 INLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSW 621

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 622 PRP-IFGSL--HHVPDLSCRGWHTILIVEK 648



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 6/162 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG  H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 290 KSGCSSWQVCAGITHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 349

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV   +  T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 350 KAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGCIGV-DKIAGSEVLEPMQLNFFLSNPVEQ 408

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +S G  H VV+T    ++ +G  E  +LG D+      P  +
Sbjct: 409 VSCGDNHVVVLTRNKEVYSWGCGEHGRLGLDSEEDYYTPQRV 450



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           DEL  R +   RR+   V          V    +  VY WG G            K+ P+
Sbjct: 241 DELLDRPLLRKRRRSSTVTEAPIA----VVTSRTSEVYVWGGG------------KSTPQ 284

Query: 369 PLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRIL 425
            L  +KS  +  QVCA      V+     +Y +  M  G+      G  DK    +P+ +
Sbjct: 285 KLDVIKSGCSSWQVCAGITHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHV 344

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 477
           + L+   + Q+S G   TV VTD G+L+ FG +    +G D + G   LEP ++
Sbjct: 345 EKLQGKAIRQVSCGEDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGSEVLEPMQL 398


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  +   +  +
Sbjct: 53  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VDTG VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 113

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 232

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2041

 Score =  107 bits (268), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 9/249 (3%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG--DTLDRPTPKSIAPLEEVGSVVQIAAG 278
           ++  G + T  LT  G V   G  + G LG+G  D L+ PT   I+ L       +IAAG
Sbjct: 303 KIVCGHHHTMALTEEGAVFIWGMGSQGCLGNGRVDDLETPTQIDISGL----FFNEIAAG 358

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             + LA+  N  VY +G  +   LG G + ++L P+ +  F RK I    +  GD+H   
Sbjct: 359 AYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQYLYCGDQHSAC 418

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           + ++  +YTWG G    LGHG  +D+  P+ +  L+    + V      +  + + G VY
Sbjct: 419 ITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDVYVLDVALGTIHSLCITNEGFVY 478

Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRI---LDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
            +G      LG P +   D+ L  R+     S R     Q++ G  H++ +++ G L+ +
Sbjct: 479 AWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFYQVAAGTSHSLSLSENGHLYVW 538

Query: 456 GDNERAQLG 464
           G N+ + LG
Sbjct: 539 GSNKNSLLG 547



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 15/270 (5%)

Query: 98  QSVEHSSDIVETSAGNQ--MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS 154
           Q+  ++SD ++  A  Q  ++I  G +HT+ L    +VF  G    G LG+G       +
Sbjct: 283 QAEPNNSDFIQPIALKQEFVKIVCGHHHTMALTEEGAVFIWGMGSQGCLGNG-RVDDLET 341

Query: 155 FTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVE-A 213
            T+I+  S     +++A   H+  + ++ QV+  G N+    G  +    +   +L    
Sbjct: 342 PTQIDI-SGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFD 400

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
            K + C+ +  G   +  +T    ++T G+  + +LGHG  LD   PK I  L++V  V+
Sbjct: 401 RKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEMEPKKIEILQDV-YVL 459

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAI----QTFRRKGIHVV 327
            +A G  + L +T  G VY++GS  +  LG   Q   D+  P+ +    Q+FR    +  
Sbjct: 460 DVALGTIHSLCITNEGFVYAWGSSKDSVLGMPTQQYKDQTLPQRVGLMSQSFRDASFY-- 517

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
           +V+AG  H ++L  +G++Y WG      LG
Sbjct: 518 QVAAGTSHSLSLSENGHLYVWGSNKNSLLG 547



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 14/186 (7%)

Query: 298 SNFCLGHGEQH--DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           S + L   E +  D +QP A++         V++  G  H +AL   G V+ WG G  G 
Sbjct: 277 SQYNLNQAEPNNSDFIQPIALKQ------EFVKIVCGHHHTMALTEEGAVFIWGMGSQGC 330

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG+G   D   P  +  +      ++ A    +  L     VYG+G    G LG    G 
Sbjct: 331 LGNGRVDDLETPTQID-ISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGI---GN 386

Query: 416 SDKVLRPRILDSLRAHHVS--QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLE 473
            +  L P+ L       +    +  G  H+  +T    L+ +G+ +  +LGH  L   +E
Sbjct: 387 KENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEME 446

Query: 474 PTEIFI 479
           P +I I
Sbjct: 447 PKKIEI 452



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 88/435 (20%), Positives = 161/435 (37%), Gaps = 80/435 (18%)

Query: 43  GGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEH 102
           G  H   PQK     DL  S  C   +++  + +  Q  + +      ++++ F Q+   
Sbjct: 552 GQEHTCVPQKVEQSEDLEKS--CIEKALFFNLKKEEQQMMKD------EKLVTFEQTTLM 603

Query: 103 SSDIVETSAGNQMQI-----TTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFT 156
            + I++++ G   +      T G  +T  I N+  +++CGS+  G+L   P   Q     
Sbjct: 604 KT-ILQSTMGQSHECKYKFATLGTKNTYFIDNTGHLYACGSNQKGMLCKNPHKKQ----- 657

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
                                F+ Q        + S             F P  +   + 
Sbjct: 658 -----------------KFKQFIPQKDPPDILFEQS-------------FTPIEIVYFRN 687

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQI 275
              + ++   N    +T +G+ +  GSN + QLG G   D   TP  +    E   ++  
Sbjct: 688 TIIRYISCQYNHCIAVTAKGNAYCWGSNQYNQLGLGFQSDHVFTPILLEGAIEQKVIIMA 747

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVVRVSAGD 333
             G  +   +T  G V+SFG+     LGH  +  +  ++PR I         ++ ++  +
Sbjct: 748 ITGEKFSALLTDQGEVWSFGTSEFGVLGHELKNFYVIMEPRMINDIPS----MINLACSN 803

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
           + + A+D    ++ WG    G LG   + D          +  + +Q   +    F+   
Sbjct: 804 QTMFAIDQKQQLWAWGNNQFGQLGISLQRD----------EEEINLQTNKQVSSEFL--- 850

Query: 394 TGSVYGFGWMG-FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
                   W     SL  P+R +  +  +P          V Q+S GLYHT ++T    L
Sbjct: 851 -------EWKAQLKSLKNPERYIVYQPDKPSTRSITGEAFVDQVSCGLYHTCIITTNQEL 903

Query: 453 FGFGDNERAQLGHDT 467
              G  + A  GH +
Sbjct: 904 LTCGLAKYA--GHQS 916


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  +   +  +
Sbjct: 29  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 79

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 80  SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 139

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 140 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 199

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 257

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 258 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + V
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 184

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VDTG VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 185 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 241

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 242 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 283



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 32  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 89

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 150 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 208

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 209 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 266


>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
          Length = 479

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 158/352 (44%), Gaps = 38/352 (10%)

Query: 123 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           H++LIS     +S G + CG LG G  TT+ +    I      +++  +   NH+ FV  
Sbjct: 122 HSILISAEGEAYSFGRNSCGQLGFGDTTTRNIP-EPIPTLKGFNIIHAAVGRNHSLFVTD 180

Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
           +G V+ CGDN S  CG   T   I  P  V    G P  +V  G  F+  L   G +H+ 
Sbjct: 181 TGTVYACGDNKSAQCGLGHTTPQILVPTRVR-YTGAPIVKVGCGAEFSMILDCNGALHSF 239

Query: 242 GSNTHGQLGH---GDTLDRPT---------PKSIA------------PLEEVGSVVQIAA 277
           G   +GQLGH   G      T         PK IA            P+++V  +V  + 
Sbjct: 240 GLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDV-DIVDFSC 298

Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
           G ++ +A+      YS+G G    LGH EQ DE  PR I+ F  +   V  V  G  + +
Sbjct: 299 GNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQARGVRSVHCGATYSL 358

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           A++  G ++ +G+      G  +      P+P+  L +   ++       + V+    S+
Sbjct: 359 AVNEHGALFMFGQ--TKRTGEAN----MYPKPVQDL-TGWNIRSVGTSNTSIVIAADDSL 411

Query: 398 YGFGWMG-FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
             +G    +G LG  D  ++    RP+ +  +   +++Q++ G  HT++++D
Sbjct: 412 IAWGVSPTYGELGTGD--INKSTARPKEVTRMEGLNITQVAMGYSHTLLLSD 461



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 32/222 (14%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           S  H+  +   G+ ++ G NS    G  DT  R I  P  +  LKG        G N + 
Sbjct: 119 SAGHSILISAEGEAYSFGRNSCGQLGFGDTTTRNI--PEPIPTLKGFNIIHAAVGRNHSL 176

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGS-VVQIAAGPSYMLAVTG 287
           F+T  G V+ CG N   Q G G T    TP+ + P  +   G+ +V++  G  + + +  
Sbjct: 177 FVTDTGTVYACGDNKSAQCGLGHT----TPQILVPTRVRYTGAPIVKVGCGAEFSMILDC 232

Query: 288 NGVVYSFGSGSNFCLGHGEQ------------HDELQPRAIQTFRRKG----------IH 325
           NG ++SFG      LGH               H E+ P+ I  F  K           + 
Sbjct: 233 NGALHSFGLPEYGQLGHNTDGKYFVTSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDVD 292

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
           +V  S G+ H VA+DS    Y+WG G  G LGH ++ D+++P
Sbjct: 293 IVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVP 334



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 13/142 (9%)

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           SAG  H + + + G  Y++G+  CG LG GD   + +PEP+ +LK    +     +  + 
Sbjct: 119 SAG--HSILISAEGEAYSFGRNSCGQLGFGDTTTRNIPEPIPTLKGFNIIHAAVGRNHSL 176

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH----VSQISTGLYHTVV 445
            + DTG+VY  G       G            P+IL   R  +    + ++  G   +++
Sbjct: 177 FVTDTGTVYACGDNKSAQCGLGH-------TTPQILVPTRVRYTGAPIVKVGCGAEFSMI 229

Query: 446 VTDRGRLFGFGDNERAQLGHDT 467
           +   G L  FG  E  QLGH+T
Sbjct: 230 LDCNGALHSFGLPEYGQLGHNT 251



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 94/239 (39%), Gaps = 34/239 (14%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            ++  G  ++ G N+ GQLG GDT  R  P+ I  L+   +++  A G ++ L VT  G 
Sbjct: 125 LISAEGEAYSFGRNSCGQLGFGDTTTRNIPEPIPTLKGF-NIIHAAVGRNHSLFVTDTGT 183

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY+ G   +   G G  H   Q       R  G  +V+V  G E  + LD +G ++++G 
Sbjct: 184 VYACGDNKSAQCGLG--HTTPQILVPTRVRYTGAPIVKVGCGAEFSMILDCNGALHSFGL 241

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LGH  +                           + +  T   Y F  +      F
Sbjct: 242 PEYGQLGHNTD-------------------------GKYFVTSTKLSYHFEMVPKHIAFF 276

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
            ++     V   + +D      +   S G  HTV +  + R + +G     +LGH   R
Sbjct: 277 FEKSKDGHVSPVKDVD------IVDFSCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQR 329


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 137/299 (45%), Gaps = 18/299 (6%)

Query: 157 RINFPSAAH------VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRL 210
           RI +P+         +V++     H   + ++G+V+  G NS F             P  
Sbjct: 127 RIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWG-NSEFGQTGLGNKEAQHLPIR 185

Query: 211 VEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG 270
           +E  +      V+ GL+ +  ++  G V T G    GQLGH  T D   PK +  +   G
Sbjct: 186 MEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEG 245

Query: 271 SVVQIAAGPSYM-LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
            + ++  G  +  L     G +++FG+G    LGHGE+   L+P  +        +V  V
Sbjct: 246 -ISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPL-----DNVKEV 299

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKT 388
           +AG  H++AL   G  ++WG G  G LGHG   D   PEP+ +L   +  V V A    +
Sbjct: 300 AAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHS 359

Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             L ++G VYG+G+   G LG    G    V+ P ++ +L    V +   GL H++ +T
Sbjct: 360 LALTESGQVYGWGFNASGRLGL---GNESSVMTPTLIKALADKRVLRAICGLDHSLFIT 415



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 15/350 (4%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
           V++CG+     LG G      +       P  A  +  +A       +    +++  G +
Sbjct: 55  VYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSS 114

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
             +       ++ I+ P L E  + +   ++  G      L+  G V+  G++  GQ G 
Sbjct: 115 GVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGL 174

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 311
           G+   +  P  +    +  S+V ++ G  +  AV+ +G V+++G G +  LGH    DEL
Sbjct: 175 GNKEAQHLPIRMEFFRDK-SIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDEL 233

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGALGHGDEIDKTLPE-- 368
           +P+ +   R +GI   RV+ G +    L ++ G ++T+G G  G LGHG+      P   
Sbjct: 234 KPKELTVIRGEGIS--RVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVV 291

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
           PL ++K     +V A       L   G  + +GW   G LG    G ++  L+P  + +L
Sbjct: 292 PLDNVK-----EVAAGGAHMLALTKDGQAWSWGWGEDGRLG---HGATEDFLKPEPIPTL 343

Query: 429 -RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             A  V  +S G  H++ +T+ G+++G+G N   +LG       + PT I
Sbjct: 344 GPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLI 393



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 7/249 (2%)

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V+TCG+  + QLG GD  D   P  +  L    S +  AAG +    +T    +Y +GS 
Sbjct: 55  VYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSS 114

Query: 298 SNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             + L    +   +  P   +  +  GI  V++  G +H +AL  +G VY WG    G  
Sbjct: 115 GVYALLPMRRDKRIYYPTLCEPAQSLGI--VKIRTGRQHGIALSKNGEVYIWGNSEFGQT 172

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
           G G++  + LP  +   +    V V      +  +   G V+ +G+   G LG    G  
Sbjct: 173 GLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGH--NGTE 230

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTD-RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           D+ L+P+ L  +R   +S+++ G   T ++ +  GRLF FG+ E  QLGH     CLEP+
Sbjct: 231 DE-LKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPS 289

Query: 476 EIFIQEMEE 484
            + +  ++E
Sbjct: 290 VVPLDNVKE 298



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 111/272 (40%), Gaps = 55/272 (20%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           ++I TGR H + +S N  V+  G+S  G  G G +  Q +   R+ F     +V VS   
Sbjct: 143 VKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLPI-RMEFFRDKSIVDVSCGL 201

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 232
           +H+A V + G+V+T G       GH  T   + +P+ +  ++G    +VT G +FTG L 
Sbjct: 202 DHSAAVSKDGRVWTWGYGIDGQLGHNGTEDEL-KPKELTVIRGEGISRVTCGTDFTGLLN 260

Query: 233 -------------------------------------------------TIRGHVHTCGS 243
                                                            T  G   + G 
Sbjct: 261 ETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPLDNVKEVAAGGAHMLALTKDGQAWSWGW 320

Query: 244 NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
              G+LGHG T D   P+ I  L     VV ++AG  + LA+T +G VY +G  ++  LG
Sbjct: 321 GEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLG 380

Query: 304 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
            G +   + P  I+    K   V+R   G +H
Sbjct: 381 LGNESSVMTPTLIKALADK--RVLRAICGLDH 410


>gi|440791580|gb|ELR12818.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 439

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 128/269 (47%), Gaps = 19/269 (7%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG-QLGHGDTLDRP------TP 260
           P  + AL+G+    V AG N + FLT  G V+ CG + +G QLG     +         P
Sbjct: 84  PARIGALRGLRIAAVAAGENHSLFLTDDGQVYACGVSLNGSQLGFAGCREEDLCQMHYVP 143

Query: 261 KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
           + ++ L++V  VV+IAAGP++ L +T    VYSFG      LG G+  +   P  ++  R
Sbjct: 144 ERVSGLDDV-VVVKIAAGPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRWTPTLVEALR 202

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY-CGALGHGDEIDKTLPEPLSSLK-SHLA 378
             G  +V+V AGD +  A+  SG V+ WG    C  L   D    TL E LS    + +A
Sbjct: 203 --GEEIVQVVAGDTNSAAITKSGQVFMWGSCRSCIDLPSNDPTKPTLVEALSGTPIAAVA 260

Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGF--GSLGFPDRGVSDKVLR-PRILDSLRAHHVSQ 435
           +  C        L   G V   G   +  G LG+  R    K  R PR +        + 
Sbjct: 261 LGEC----HCLFLTTDGLVLSCGLDLYHSGLLGYDVRDNPRKEQRVPRPIPHFTGEVAAA 316

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           I+ G  H++V+T  GRLF FGDN   QLG
Sbjct: 317 IAAGEGHSLVLTRDGRLFAFGDNRSGQLG 345



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 158/361 (43%), Gaps = 32/361 (8%)

Query: 142 VLGHG----PETTQCVSFT---RINFPSAAHVVQVSASENHAAFVLQSGQVFTCG----- 189
           VLGH     P + Q V +    RI       +  V+A ENH+ F+   GQV+ CG     
Sbjct: 64  VLGHPRQEEPSSHQGVRWAAPARIGALRGLRIAAVAAGENHSLFLTDDGQVYACGVSLNG 123

Query: 190 DNSSFC-CGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
               F  C   D  +  + P  V  L  V   ++ AG   +  LT    V++ G N +G 
Sbjct: 124 SQLGFAGCREEDLCQMHYVPERVSGLDDVVVVKIAAGPTHSLVLTSTAAVYSFGENRYGH 183

Query: 249 LGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE 306
           LG GD  +R TP  +  L  EE   +VQ+ AG +   A+T +G V+ +GS  + C+    
Sbjct: 184 LGLGDYENRWTPTLVEALRGEE---IVQVVAGDTNSAAITKSGQVFMWGSCRS-CIDL-P 238

Query: 307 QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG--YCGALGH----GD 360
            +D  +P  ++     G  +  V+ G+ H + L + G V + G    + G LG+      
Sbjct: 239 SNDPTKPTLVEAL--SGTPIAAVALGECHCLFLTTDGLVLSCGLDLYHSGLLGYDVRDNP 296

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF----PDRGVS 416
             ++ +P P+      +A  + A +  + VL   G ++ FG    G LG     P+  VS
Sbjct: 297 RKEQRVPRPIPHFTGEVAAAIAAGEGHSLVLTRDGRLFAFGDNRSGQLGLGRTSPELNVS 356

Query: 417 DKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
                P  + +L    V+ +     H+  +   G ++ FGD E  QLGH T      P +
Sbjct: 357 KPTELPSPVAALAHVQVAGVVAAPLHSCAIAHDGSVYSFGDGEFYQLGHGTTDSWNVPKK 416

Query: 477 I 477
           I
Sbjct: 417 I 417



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 131/294 (44%), Gaps = 25/294 (8%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           ++I  G  H+L L S ++V+S G +  G LG G    +    T +       +VQV A +
Sbjct: 155 VKIAAGPTHSLVLTSTAAVYSFGENRYGHLGLGDYENRWTP-TLVEALRGEEIVQVVAGD 213

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            ++A + +SGQVF  G   S  C    +N P  +P LVEAL G P   V  G     FLT
Sbjct: 214 TNSAAITKSGQVFMWGSCRS--CIDLPSNDPT-KPTLVEALSGTPIAAVALGECHCLFLT 270

Query: 234 IRGHVHTCGSNTH--GQLGHGDTLDRPTPKSIAPLE------EVGSVVQIAAGPSYMLAV 285
             G V +CG + +  G LG+ D  D P  +   P        EV +   IAAG  + L +
Sbjct: 271 TDGLVLSCGLDLYHSGLLGY-DVRDNPRKEQRVPRPIPHFTGEVAAA--IAAGEGHSLVL 327

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQ-------PRAIQTFRRKGIHVVRVSAGDEHVVA 338
           T +G +++FG   +  LG G    EL        P  +       + V  V A   H  A
Sbjct: 328 TRDGRLFAFGDNRSGQLGLGRTSPELNVSKPTELPSPVAALAH--VQVAGVVAAPLHSCA 385

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           +   G VY++G G    LGHG      +P+ + +L       + + +  T  L+
Sbjct: 386 IAHDGSVYSFGDGEFYQLGHGTTDSWNVPKKIDALVPFFMTSIASTRAHTLALL 439


>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
           harrisii]
          Length = 531

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  V+ V+ G  H +AL + G VY 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVIEVACGSHHSMALAADGEVYA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P +I +++
Sbjct: 269 NKSNLLSPAQIMVEK 283



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S N A +V  S +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTHSDEVFVFGLNCSNCLGTGD-NQSTIVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           VY++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVSIACGQTSSMAVLDNGEVYG 204

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    G LG G+  ++  P  +++L S   +Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 408 LGFPDRGVSDKVLRP 422
           LG    G    +L P
Sbjct: 265 LG---TGNKSNLLSP 276



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V+  G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V+++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRVAALH--SVCVLQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H++ L ++  V++ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALT 249

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 291
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKSNLLSPAQI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 292 YSFG 295
           Y +G
Sbjct: 308 YMWG 311


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  +   +  +
Sbjct: 29  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 79

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 80  SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 139

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 140 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 199

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 257

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 258 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + V
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 184

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VDTG VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 185 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 241

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 242 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 283



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 32  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 89

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 150 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 208

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 209 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 266


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 173/413 (41%), Gaps = 51/413 (12%)

Query: 101 EHSSDIVETSAGNQMQITTGRYHTLLI----SNSSVFSCGSSLCGVLGHGPETTQCVSFT 156
           E ++ I      +  ++  G YHTL++        + + G +   VLG G ET + V   
Sbjct: 35  ETANRIARLGPTSVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPG 94

Query: 157 RINFPSAAHVVQVSASENHAAFVLQ-----SGQVFTCGDNSSFCCGH------------- 198
            + F S   V +VS   N++A +++      G+V+T G  +    G+             
Sbjct: 95  LVPFFSRHGVFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQG 154

Query: 199 ------RDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
                 ++     F P+         CK  +++ G + T  L+  G ++  G  ++G LG
Sbjct: 155 DDAGDGQEDGPSWFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLG 214

Query: 251 HGDTLDRPTPKSIAPLEEVGS------------------VVQIAAGPSYMLAVTGNGVVY 292
            GDT D  +P  +    E GS                  V   AAG  + +A T +G ++
Sbjct: 215 QGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLW 274

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G G N  LG G     L P  +     +   VV VSAGD H   +D  G +YTWG G 
Sbjct: 275 TWGHGGNGRLGLGHNRGSLSPAVVDYILDR--DVVFVSAGDSHSACIDRQGVLYTWGSGG 332

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LGHGD+ +  +P  +        +QV      T  L   G+V+ +G      LG  +
Sbjct: 333 FGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGE 392

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            G    V  P+ L  +    V  ++ G YH+  VT  G L  +G    ++LGH
Sbjct: 393 DGGGGMVTVPKHLSDIEV-AVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGH 444



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 176/423 (41%), Gaps = 68/423 (16%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--------- 165
           +I+ G  HTL +S+  ++++ G    G LG G +T+   S  R+   S            
Sbjct: 185 RISCGADHTLALSDGGALYAWGVGSYGNLGQG-DTSDAYSPVRVLLGSEKGSGKKKENLG 243

Query: 166 ----------VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEA 213
                     V   +A   H+      G ++T G   N     GH   NR    P +V+ 
Sbjct: 244 IGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGH---NRGSLSPAVVDY 300

Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV 273
           +       V+AG + +  +  +G ++T GS   G+LGHGD  + P P+ +     V  V+
Sbjct: 301 ILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGV-PVL 359

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
           Q+A G  + LA+T  G V+++G+G    LG GE          +      + V+ V+AG 
Sbjct: 360 QVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGP 419

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV------CARKRK 387
            H  A+   G +  WG G    LGHGD+ ++  P+ ++ L++ + V         +R R+
Sbjct: 420 YHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRR 479

Query: 388 ---------------------------------TFVLVDTGSVYGFGWMGFGSLGFPDRG 414
                                            T  L  TG+V+ +G    G LG  ++ 
Sbjct: 480 DYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQ- 538

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           V +    P  LD   +  + +I+ G  H + V   G +F +G N+  QLG   LR   EP
Sbjct: 539 VEEDQYEPVKLDCF-STPIRRIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEP 597

Query: 475 TEI 477
             +
Sbjct: 598 AAV 600



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 159/417 (38%), Gaps = 64/417 (15%)

Query: 117 ITTGRYHTLLISNSSV-FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
           ++ G  H+  I    V ++ GS   G LGHG +    V      F     V+QV+    H
Sbjct: 309 VSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGF-GGVPVLQVACGTFH 367

Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRP--IFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
              +   G VF  G   +   G  +      +  P+ +  ++ V    V AG   +  +T
Sbjct: 368 TLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIE-VAVLNVAAGPYHSAAVT 426

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA---------------- 277
           + G +   G     +LGHGD  ++P PK +A L     V  + +                
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDV 486

Query: 278 ----------------------GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQP 313
                                 G ++ +A+TG G V+ +GS     LG GEQ   D+ +P
Sbjct: 487 LGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEP 546

Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
             +  F      + R++ G +H +A+   G V+ WG    G LG G       P  +++L
Sbjct: 547 VKLDCF---STPIRRIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTAL 603

Query: 374 KSHLAV------QVCARKR---KTFVLV-----DTGSVYGFGWMGFGSLGFPDRGVSDKV 419
           +  + V        C       +T  L      + G ++ +G    G LG  +   S  +
Sbjct: 604 RQAIDVFCGDDYSACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSI 663

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTE 476
           L P+ +    +  V   S G  H + +T RG  + +G     +LG  T      PT+
Sbjct: 664 LTPQKVPF--SVPVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTK 718



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 117/316 (37%), Gaps = 39/316 (12%)

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           ENH   +  +G V+  G N     G         + P  ++     P +++  G      
Sbjct: 510 ENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFS-TPIRRIACGSKHCLA 568

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG-- 289
           +   G V   G+N  GQLG G       P ++  L +    + +  G  Y   +T NG  
Sbjct: 569 VAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQA---IDVFCGDDYSACITSNGGA 625

Query: 290 --------------VVYSFGSGSNFCLGHGEQHDE---LQPRAIQTFRRKGIHVVRVSAG 332
                          ++++G+  +  LG GE       L P+ +       + V   S G
Sbjct: 626 QTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPF----SVPVCACSLG 681

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
             H +A+ + G  Y WG GY G LG G   +   P      K      V A    +  L 
Sbjct: 682 TSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALS 741

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA----HHVSQISTGLYHTVVVTD 448
             G ++ +G          D   +     PRI   L +      V  I+   +H++ VT+
Sbjct: 742 MDGDLWIWG-------KKEDTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTE 794

Query: 449 RGRLFGFGDNERAQLG 464
            G +F +GDN+  Q G
Sbjct: 795 TGEVFAWGDNKLYQTG 810



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 112/289 (38%), Gaps = 70/289 (24%)

Query: 220 KQVTAGLNFTGFLTIRG---HVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQI 275
           K+V  GL  T  + ++G    +   G N +  LG G +T +R  P  + P      V ++
Sbjct: 49  KRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFP-GLVPFFSRHGVFEV 107

Query: 276 AAGPS-----YMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-------------------- 310
           + G +        A    G VY+FG G+   LG+ +   E                    
Sbjct: 108 SCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSW 167

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
             P+  +   R    + R+S G +H +AL   G +Y WG G  G LG GD  D   P   
Sbjct: 168 FTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSP--- 224

Query: 371 SSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
             ++  L  +  + K+K                   +LG   RG +D V+          
Sbjct: 225 --VRVLLGSEKGSGKKKE------------------NLGIGRRG-TDPVV---------- 253

Query: 431 HHVSQISTGLYHTVVVTDRGRL--FGFGDNERAQLGHDTLRGCLEPTEI 477
             V+  + G  H++  T  G L  +G G N R  LGH+  RG L P  +
Sbjct: 254 --VTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN--RGSLSPAVV 298



 Score = 40.8 bits (94), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 8/183 (4%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD 190
            +++ G++  G LG G +       T    P +  V   S   +HA  +   G+ +  G 
Sbjct: 640 DLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVPVCACSLGTSHALAITARGECYAWGA 699

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
                 G   T    + P   +  KGV  + V AG + +  L++ G +   G        
Sbjct: 700 GYYGRLGI-GTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKED---- 754

Query: 251 HGDTLDRPTPKSIAPLEE---VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
              T +  +P+    LE    V  V  IAA   + LAVT  G V+++G    +  G G++
Sbjct: 755 TCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKR 814

Query: 308 HDE 310
             E
Sbjct: 815 QAE 817


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 161/373 (43%), Gaps = 50/373 (13%)

Query: 128 SNSSVFSCGSSLCGVLG-------HGPETTQCVSFTRINFPS--AAHVVQVSASENHAAF 178
           S   V+S G+   G LG       H P+     S + I+  +   AHV+ ++++      
Sbjct: 16  SEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSA------ 69

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
               G+  + G  +S   GH +       P+ V +L G     V+AG + +GF++  G V
Sbjct: 70  ----GKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFV 125

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            TCG  + GQLGHGD     +P  ++   ++  V Q+A G  + L +     VY FGSG 
Sbjct: 126 FTCGDGSFGQLGHGDNASHCSPVKVSCFVDL-HVAQVACGMRHSLVLLKGNQVYGFGSGK 184

Query: 299 NFCLGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
              L  G  +D ++    P+ +  F  +G+ +V  +A  +H  A+   G+VYTWG+G+ G
Sbjct: 185 RGQL--GVSNDRVKSVNVPKVVSGF--EGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKG 240

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG----- 409
                   D  +P+ L+S  S    +V         +   G VY  G    G L      
Sbjct: 241 FE------DAHVPQCLNS--SLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNI 292

Query: 410 -----FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                FPD     +      +  L    ++ I+ G  H+V+VT+ G +  +G  E  QLG
Sbjct: 293 GPAKHFPDL----REFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLG 348

Query: 465 HDTLRGCLEPTEI 477
               R    P  +
Sbjct: 349 LGDTRDQTSPVTV 361



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 19/265 (7%)

Query: 116 QITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
            ++ G  H+  +S++  VF+CG    G LGHG   + C S  +++     HV QV+    
Sbjct: 108 HVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNASHC-SPVKVSCFVDLHVAQVACGMR 166

Query: 175 HAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           H+  +L+  QV+  G       G   D  + +  P++V   +GV      A  + +  ++
Sbjct: 167 HSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVS 226

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           + GHV+T G    G        D   P+    L    +  ++A G ++ LA++G G VY 
Sbjct: 227 VDGHVYTWGRGFKG------FEDAHVPQC---LNSSLNFTKVALGWNHALAMSGEGEVYM 277

Query: 294 FGSGSNFCL------GHGEQHDELQPRAIQTFR-RKGIHVVRVSAGDEHVVALDSSGYVY 346
            G      L      G  +   +L+   ++      G  +  ++AG EH V +   G + 
Sbjct: 278 LGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIK 337

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLS 371
           TWG G  G LG GD  D+T P  +S
Sbjct: 338 TWGWGEHGQLGLGDTRDQTSPVTVS 362



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 121/305 (39%), Gaps = 25/305 (8%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L S     S G    G LGHG   +  +    +       +  VSA  +H+ FV
Sbjct: 60  GAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFV 119

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
             +G VFTCGD S    GH D N     P  V     +   QV  G+  +  L     V+
Sbjct: 120 SDTGFVFTCGDGSFGQLGHGD-NASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVY 178

Query: 240 TCGSNTHGQLGHGDTLDRP--TPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
             GS   GQLG  +   +    PK ++  E V  +V  AA   +  AV+ +G VY++G G
Sbjct: 179 GFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGV-EIVGTAANGDHSAAVSVDGHVYTWGRG 237

Query: 298 -SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
              F        D   P+ + +     ++  +V+ G  H +A+   G VY  G  + G L
Sbjct: 238 FKGF-------EDAHVPQCLNS----SLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVL 286

Query: 357 GHGDEID--KTLP-------EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
                I   K  P       E +  L       + A    + ++ + G +  +GW   G 
Sbjct: 287 SDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQ 346

Query: 408 LGFPD 412
           LG  D
Sbjct: 347 LGLGD 351



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 2/138 (1%)

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
           +S   V++WG G  G LG     D+  P+ L          +         L   G    
Sbjct: 15  ESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALS 74

Query: 400 FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
           +G    G LG  +  V    L P+ + SL  + ++ +S G  H+  V+D G +F  GD  
Sbjct: 75  WGRGNSGQLGHGE--VVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGS 132

Query: 460 RAQLGHDTLRGCLEPTEI 477
             QLGH        P ++
Sbjct: 133 FGQLGHGDNASHCSPVKV 150


>gi|330837741|ref|YP_004412382.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329749644|gb|AEC03000.1| hypothetical protein Spico_1802 [Sphaerochaeta coccoides DSM 17374]
          Length = 733

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 164/364 (45%), Gaps = 25/364 (6%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLG------HGPETTQCVSFTRINFPS-AAHVVQ 168
           ++ G YHT+++ ++ +++  G +  G LG       G E T    +   N      +V  
Sbjct: 363 VSAGGYHTMILKTDGTLWGVGYNDNGELGIGTSGDMGNERTPVQVWDSTNGSRFMTNVAA 422

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-----VPCKQVT 223
           VSA  ++   + + G ++  G N     G   T   I  P  V+A           K V+
Sbjct: 423 VSAGWDYTMILKKDGTLWGTGHNYYGQLGIGGTTD-ISTPEQVKASTADNDFMTNVKAVS 481

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYM 282
           AG   T  L   G +   G N HGQLG G+   + TP    P+  +G+ V  + AG  + 
Sbjct: 482 AGQEHTMILKKDGTLWATGDNQHGQLGIGNYEAKDTP---VPVSSMGNQVAAVFAGELHT 538

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--HVVRVSAGDEHVVALD 340
           + +  NG +++ G  ++  LG G   D   P  ++     G+   V  VSAG +H + L 
Sbjct: 539 MILKKNGTLWATGYNASGQLGIGGTTDISTPEQVKGLGGAGVMTDVAAVSAGWKHTMILK 598

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           + G ++  G    G LG G+   K  P P+SS+ + +A  V A +  T +L   G+++  
Sbjct: 599 TDGTLWATGDNQHGQLGIGNYEAKDTPVPVSSMGNQVAA-VFAGEEYTMILKKDGTLWAT 657

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   FG LG  D    D    P  + S+    V  +S G  HT+++   G L+  GDNE 
Sbjct: 658 GSNQFGRLGVGDYADKD---TPVPVSSM-GSDVKDVSAGYGHTMILKKDGTLWATGDNEY 713

Query: 461 AQLG 464
            QLG
Sbjct: 714 GQLG 717



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 22/262 (8%)

Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEE----VGS 271
            + V+AG   T  L   G +   G N +G+LG    GD  +  TP  +         + +
Sbjct: 360 VRSVSAGGYHTMILKTDGTLWGVGYNDNGELGIGTSGDMGNERTPVQVWDSTNGSRFMTN 419

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFC--LGHGEQHDELQPRAIQTFRRKG---IHV 326
           V  ++AG  Y + +  +G ++  G+G N+   LG G   D   P  ++          +V
Sbjct: 420 VAAVSAGWDYTMILKKDGTLW--GTGHNYYGQLGIGGTTDISTPEQVKASTADNDFMTNV 477

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
             VSAG EH + L   G ++  G    G LG G+   K  P P+SS+ + +A  V A + 
Sbjct: 478 KAVSAGQEHTMILKKDGTLWATGDNQHGQLGIGNYEAKDTPVPVSSMGNQVAA-VFAGEL 536

Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH----HVSQISTGLYH 442
            T +L   G+++  G+   G LG    G +  +  P  +  L        V+ +S G  H
Sbjct: 537 HTMILKKNGTLWATGYNASGQLGI---GGTTDISTPEQVKGLGGAGVMTDVAAVSAGWKH 593

Query: 443 TVVVTDRGRLFGFGDNERAQLG 464
           T+++   G L+  GDN+  QLG
Sbjct: 594 TMILKTDGTLWATGDNQHGQLG 615



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 18/266 (6%)

Query: 113 NQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH-VVQVS 170
           N   ++ G+ HT+++  + ++++ G +  G LG G    +    T +   S  + V  V 
Sbjct: 476 NVKAVSAGQEHTMILKKDGTLWATGDNQHGQLGIGNYEAKD---TPVPVSSMGNQVAAVF 532

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV----PCKQVTAGL 226
           A E H   + ++G ++  G N+S   G   T   I  P  V+ L G         V+AG 
Sbjct: 533 AGELHTMILKKNGTLWATGYNASGQLGIGGTTD-ISTPEQVKGLGGAGVMTDVAAVSAGW 591

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAV 285
             T  L   G +   G N HGQLG G+   + TP    P+  +G+ V  + AG  Y + +
Sbjct: 592 KHTMILKTDGTLWATGDNQHGQLGIGNYEAKDTP---VPVSSMGNQVAAVFAGEEYTMIL 648

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             +G +++ GS     LG G+  D+  P  + +    G  V  VSAG  H + L   G +
Sbjct: 649 KKDGTLWATGSNQFGRLGVGDYADKDTPVPVSSM---GSDVKDVSAGYGHTMILKKDGTL 705

Query: 346 YTWGKGYCGALGHGD-EIDKTLPEPL 370
           +  G    G LG G   I+   P P+
Sbjct: 706 WATGDNEYGQLGDGSTNINSNTPVPV 731


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  +   +  +
Sbjct: 56  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 106

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 107 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 166

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 167 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 226

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 227 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 284

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 285 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 338



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 35  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 93

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 94  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 151

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + V
Sbjct: 152 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 211

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VDTG VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 212 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 268

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 269 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 310



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 59  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 116

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 117 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 176

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 177 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 235

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 236 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 293


>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  +   +  +
Sbjct: 29  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVRSTIEPRRLDSLNGKKIACL 79

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 80  SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 139

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 140 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 199

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 200 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 257

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 258 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIEPR 66

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + V
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 184

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VDTG VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 185 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 241

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 242 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 283



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D  R    PR +++L G  + C    +G +    
Sbjct: 32  NEVLYTTVNDEIFVLGTNCCGCLGLGDV-RSTIEPRRLDSLNGKKIACLSYGSGPHIV-L 89

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 150 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 208

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 209 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 266


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 141/316 (44%), Gaps = 30/316 (9%)

Query: 122 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH--VVQVSASENHAAFV 179
           +   L+    +++ G +  G LG G  T+  +       PS  H  V  ++    H   +
Sbjct: 172 FSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRM---LPSMNHRHVHLMACGAAHIVVL 228

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
             S  V+T G+NS    GH    +   +P+ V  + G+  KQ+ AG N +  +T  G ++
Sbjct: 229 TTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIY 288

Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
           T G    GQLGHGD   +  P  ++PL+       I +G  +++A+T +G VYS+G    
Sbjct: 289 TWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCF 348

Query: 300 FCLGHG-EQH---------DELQPRAIQTF----RRKGIHVVRVSAGDEHVVAL-DSSGY 344
             LGHG + H         D + P+ I  F        I +  +S G  HV+A+ +    
Sbjct: 349 GQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDT 408

Query: 345 VYTWGKGYCGALG--HGDEIDKTLPEPLSSLKSHLAV-QVCARKRKTFVLVDTGS----- 396
           ++ WG+G  G LG    D   + +P+ +  +K  + +   C+      V    GS     
Sbjct: 409 LFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGD 468

Query: 397 --VYGFGWMGFGSLGF 410
             V+ +G   FG LG+
Sbjct: 469 MKVFSWGRGSFGQLGY 484



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 148/348 (42%), Gaps = 77/348 (22%)

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI--- 263
           RP+ V +L G+  K +T G +    L   G + + G    GQLGH       TP  I   
Sbjct: 99  RPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDEL 158

Query: 264 ---------------APLEEVGSVVQ---------------------------------I 275
                          A L E G +                                   +
Sbjct: 159 ASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLM 218

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDE 334
           A G ++++ +T +  VY++G+ S   LGHG +    LQP++++     G+ + ++ AG+ 
Sbjct: 219 ACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVM--SGLDIKQIVAGEN 276

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL--KSHLAVQVCARKRKTFVLV 392
           H   + S G +YTWG+G  G LGHGD   K +P  LS L  K+  ++ V       F++ 
Sbjct: 277 HSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLIVSG---ADFIMA 333

Query: 393 DT--GSVYGFGWMGFGSLGF--------PDRGVSDKVLRPRILDSLRAHH------VSQI 436
            T  G+VY +G   FG LG          +R  SD V+ P+I+    A        +S I
Sbjct: 334 MTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSD-VISPKIISFFAASEEHDAISLSSI 392

Query: 437 STGLYHTVVVTD-RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
           S G +H + +T+ +  LF +G  E  QLG D       P    +++M+
Sbjct: 393 SCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMK 440



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 30/262 (11%)

Query: 125 LLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
           +L ++  V++ G++  G LGHG     C+    +   S   + Q+ A ENH+  +   G 
Sbjct: 227 VLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGD 286

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQ---VTAGLNFTGFLTIRGHVHTC 241
           ++T G       GH D       P L+  L   P  Q   + +G +F   +T  G V++ 
Sbjct: 287 IYTWGRGDFGQLGHGDMESKDI-PTLLSPLD--PKTQASLIVSGADFIMAMTYSGAVYSW 343

Query: 242 GSNTHGQLGHGDTL----------DRPTPKSI---APLEE--VGSVVQIAAGPSYMLAVT 286
           G N  GQLGHG  +          D  +PK I   A  EE    S+  I+ G  ++LA+T
Sbjct: 344 GRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAIT 403

Query: 287 -GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH---VVALDSS 342
                ++++G G +  LG   +    +P   +  + KG+ V+  +  + H   V  +  S
Sbjct: 404 EKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVATMPGS 463

Query: 343 G-----YVYTWGKGYCGALGHG 359
           G      V++WG+G  G LG+G
Sbjct: 464 GPKGDMKVFSWGRGSFGQLGYG 485


>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
          Length = 531

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 5/286 (1%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGY 207

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 357 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
           G G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|313220445|emb|CBY31298.1| unnamed protein product [Oikopleura dioica]
          Length = 1097

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 141/289 (48%), Gaps = 31/289 (10%)

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR---PTPKSIA---PLEE 268
           KG+    + +G   T  L +   V+  GSN  GQLG G  + R   P P   +   P++ 
Sbjct: 468 KGLNIMDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPVKFSTNRPVQA 527

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVV 327
           +G+     A  S  L    N +V++ G+G N CLGHG +H   + P  +Q        VV
Sbjct: 528 IGT----GADFSVFLM---NKMVFTCGNGENGCLGHGSEHKSSMFPNMVQDL--ISYDVV 578

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
           ++SAG +HV+AL S G VY+WG G  G LGHG +  +  P  ++SL+  +  ++ A    
Sbjct: 579 KISAGYKHVLALTSDGDVYSWGCGELGRLGHGGQGSEFSPRKITSLQEKIK-EIYAGYDS 637

Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR------------PRILDSLRAHH-VS 434
           +F +  +G++Y  G      +G   R + D + R            P +   L ++  +S
Sbjct: 638 SFFIGISGNMYVCGSNRDNKIGLQKRSMLD-IFRLGHSRIPPYKDTPILSRQLNSNQTIS 696

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
           +IS    HTVV+T  G+LF  G N   Q G +  R  ++ + I I +++
Sbjct: 697 KISQARDHTVVLTSTGQLFTMGRNSEGQRGLENSRSMIDCSPIQIPKID 745



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 121/261 (46%), Gaps = 21/261 (8%)

Query: 113 NQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N M I +G  HTL++  N+ V+  GS+  G LG G +  +  +   + F +   V  +  
Sbjct: 471 NIMDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPVKFSTNRPVQAIGT 530

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             + + F++    VFTCG+  + C GH   ++    P +V+ L      +++AG      
Sbjct: 531 GADFSVFLMNK-MVFTCGNGENGCLGHGSEHKSSMFPNMVQDLISYDVVKISAGYKHVLA 589

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG--PSYMLAVTGNG 289
           LT  G V++ G    G+LGHG      +P+ I  L+E   + +I AG   S+ + ++GN 
Sbjct: 590 LTSDGDVYSWGCGELGRLGHGGQGSEFSPRKITSLQE--KIKEIYAGYDSSFFIGISGN- 646

Query: 290 VVYSFGSGSNFCLGHGEQ---------HDELQPRAIQTFRRKGIH----VVRVSAGDEHV 336
            +Y  GS  +  +G  ++         H  + P        + ++    + ++S   +H 
Sbjct: 647 -MYVCGSNRDNKIGLQKRSMLDIFRLGHSRIPPYKDTPILSRQLNSNQTISKISQARDHT 705

Query: 337 VALDSSGYVYTWGKGYCGALG 357
           V L S+G ++T G+   G  G
Sbjct: 706 VVLTSTGQLFTMGRNSEGQRG 726



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 4/146 (2%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAV 379
           +KG++++ + +GD H + LD +  VY  G    G LG G ++ +   PEP+    ++  V
Sbjct: 467 QKGLNIMDIGSGDRHTLILDVNNVVYGVGSNDLGQLGFGSQMPRIENPEPV-KFSTNRPV 525

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
           Q         V +    V+  G    G LG      S   + P ++  L ++ V +IS G
Sbjct: 526 QAIGTGADFSVFLMNKMVFTCGNGENGCLGHGSEHKSS--MFPNMVQDLISYDVVKISAG 583

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGH 465
             H + +T  G ++ +G  E  +LGH
Sbjct: 584 YKHVLALTSDGDVYSWGCGELGRLGH 609


>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
           paniscus]
 gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
           [Gorilla gorilla gorilla]
 gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
          Length = 556

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  +   +  +
Sbjct: 58  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 108

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 109 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 168

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 169 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 228

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 287 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 96  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 153

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + V
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 213

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VDTG VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 214 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 270

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 271 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 118

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 237

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Nomascus leucogenys]
          Length = 556

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  +   +  +
Sbjct: 58  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 108

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 109 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 168

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 169 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 228

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 287 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 96  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 153

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + V
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 213

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VDTG VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 214 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 270

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 271 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 118

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 237

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 26/294 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V ++S    HAA V + G+VF  G+ S    GH+  N  +  P++VE+L GV  K V+ G
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHK-VNMDMGNPKIVESLTGVLVKSVSCG 367

Query: 226 LNFTGFLTIRGHVHTCGSNTHG--QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
              T  LT  G ++T G N  G   +G      +  P  ++      S+  +A G  +M 
Sbjct: 368 EYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMA 427

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL---- 339
            V+ +G ++++G G+   LGHG+     QP+ +++    G+ V   + G  H  A+    
Sbjct: 428 IVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESL--SGLWVKAAACGPWHTAAIVEVR 485

Query: 340 -------DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
                     G ++TWG G  G LGHGD+  K LP  ++ L  H  VQV   +  T  L 
Sbjct: 486 ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLT 545

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
             G+VY  G +G       DR        P +++ LR   V  I+ G   T  +
Sbjct: 546 CLGTVYTMGRLG----DTEDRN------SPAVVEELRYRQVESIACGSGFTAAI 589



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 8/187 (4%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VY FG+       +G Q D L P+ +++     + V  +S G +H   +   G V+ WG+
Sbjct: 282 VYRFGNQ------NGMQSDALLPKLLESTTM--LDVREISLGGKHAALVTKHGEVFCWGE 333

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G  G LGH   +D   P+ + SL   L   V   + +T  L  +G +Y +G  G G    
Sbjct: 334 GSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLV 393

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
            +R    + +  R+   L    +S ++ G +H  +V+  G+LF +GD     LGH  L  
Sbjct: 394 GERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLES 453

Query: 471 CLEPTEI 477
             +P E+
Sbjct: 454 ISQPKEV 460



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
           V +I+ G  +   VT +G V+ +G GS   LGH    D   P+ +++    G+ V  VS 
Sbjct: 309 VREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESL--TGVLVKSVSC 366

Query: 332 GDEHVVALDSSGYVYTWGKGYCGA--LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           G+    AL  SG +YTWG    G   +G   +  + +P  LS   +  ++   A      
Sbjct: 367 GEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHM 426

Query: 390 VLVDT-GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV-- 446
            +V T G ++ +G   FG LG    G  + + +P+ ++SL    V   + G +HT  +  
Sbjct: 427 AIVSTSGQLFTYGDGTFGVLG---HGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVE 483

Query: 447 --TDR-------GRLFGFGDNERAQLGHDTLRGCLEPT 475
              DR       G+LF +GD ++ +LGH      L PT
Sbjct: 484 VRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 521



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 18/262 (6%)

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           P+L+E+   +  ++++ G      +T  G V   G  + G+LGH   +D   PK +  L 
Sbjct: 298 PKLLESTTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLT 357

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFCL-GHGEQHDELQPRAIQTFRRKGIH 325
            V  V  ++ G     A+T +G +Y++G +GS   L G   +  +  P  + +    G  
Sbjct: 358 GV-LVKSVSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRL-SGPLNGTS 415

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS---------- 375
           +  V+ G+ H+  + +SG ++T+G G  G LGHG     + P+ + SL            
Sbjct: 416 ISNVACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGP 475

Query: 376 -HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
            H A  V  R  +       G ++ +G    G LG  D+   ++ L P  +  L  H   
Sbjct: 476 WHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQ---ERKLLPTCVAQLVDHDFV 532

Query: 435 QISTGLYHTVVVTDRGRLFGFG 456
           Q+S G   TV +T  G ++  G
Sbjct: 533 QVSCGRMLTVGLTCLGTVYTMG 554



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 24/182 (13%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS-----A 163
           +  G +H  ++S S  +F+ G    GVLGHG       P+  + +S   +   +      
Sbjct: 419 VACGEWHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHT 478

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A +V+V A  +   F  + G++FT GD      GH D  R +  P  V  L      QV+
Sbjct: 479 AAIVEVRA--DRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLL-PTCVAQLVDHDFVQVS 535

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G   T  LT  G V+T G         GDT DR +P  +  L     V  IA G  +  
Sbjct: 536 CGRMLTVGLTCLGTVYTMGR-------LGDTEDRNSPAVVEEL-RYRQVESIACGSGFTA 587

Query: 284 AV 285
           A+
Sbjct: 588 AI 589


>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
          Length = 531

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLDALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  L P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ +   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 131/304 (43%), Gaps = 13/304 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 70  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACL 120

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 121 SYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 180

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T ++P P+ +    +  +VV IA G    +AV   
Sbjct: 181 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDT 240

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 241 GEVYVWGYNGNGQLGLGSGGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAW 298

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G LG G++ +++ P P+   K   + +  C     +      G VY +G     S
Sbjct: 299 GANSYGQLGTGNKSNQSYPTPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQS 358

Query: 408 LGFP 411
           +  P
Sbjct: 359 VTLP 362



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 132/282 (46%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ V   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 49  PIFSLCSEEELQLVRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 107

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 108 RLDSLSGKKIACLSYGSGPHVVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 165

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G   ++ +P  ++  L++   V
Sbjct: 166 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVV 225

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +VDTG VY +G+ G G LG    G      R   L  +R   V +++ G
Sbjct: 226 NIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIR---VQRVACG 282

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 283 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVIVEK 324


>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 555

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  +   +  +
Sbjct: 53  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VDTG VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 113

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 232

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|261404982|ref|YP_003241223.1| S-layer domain-containing protein [Paenibacillus sp. Y412MC10]
 gi|261281445|gb|ACX63416.1| S-layer domain protein [Paenibacillus sp. Y412MC10]
          Length = 1074

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 177/400 (44%), Gaps = 30/400 (7%)

Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVS------FTRIN--FPSA 163
           N + I++  YHTL L+ N +V S GS++ G LG+G + +   +      + ++N      
Sbjct: 37  NIVSISSKGYHTLALLDNGTVLSWGSNMVGQLGNGKQGSNFSTSFAQPVYEKVNGELKVL 96

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A++V V AS  ++  +   G V+  G N+S   G R      + P  +      P +Q++
Sbjct: 97  ANIVAVEASLQYSLALSADGTVYGWGLNASNKLG-RPFEGTYYYPTAIPIAGLPPIEQIS 155

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-----LDRPTPKSIAPLEEVGSVVQIAAG 278
           AG+     L   G V   G N  G +G+G+      ++RP        E +  + QI AG
Sbjct: 156 AGVTHAAALAKDGTVWAWGDNQSGAVGNGNNGPLEYVERPVQVKKNASEFLTGIKQIHAG 215

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVV 337
             + +AVT NG +  +G    + LG    +    P  A+   +     + +VS G+++ +
Sbjct: 216 NWFTMAVTENGELLGWGYNGTYQLGDLTTNSRSYPVHALDKNKNPLNGIKKVSTGNDYTL 275

Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTL---PEPLSSLKSHLA----VQVCARKRKTFV 390
           AL   G + +WG    G LG  D +  T    P+P+    S  A    V + A       
Sbjct: 276 ALKEDGTLLSWGVNGYGQLGS-DTLQGTYSNYPKPVLDKASGDAFGHVVDISAGIAHVAA 334

Query: 391 LVDTGSVYGFG----WMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVV 445
           + + GSV+ +G    W      G   RG      RP  +  L  +  V Q  TG +HTV+
Sbjct: 335 IREDGSVWTWGGNTIWGSGDITGQLGRGDDRLEERPGRVTRLPGNAKVLQAETGGHHTVI 394

Query: 446 VTDRGRLFGFGDNERAQLGHD-TLRGCLEPTEIFIQEMEE 484
           + D G L+  G N   QLG    +   +EP ++ +   ++
Sbjct: 395 MLDNGTLWSMGSNREKQLGGGYKMDSAIEPNQLSLSHYDK 434



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI----RGHVHTCGSNTHGQLG 250
             GH DT +            G+P +     ++  G+ T+     G V + GSN  GQLG
Sbjct: 21  TTGHADTGK-----------AGLPGETNIVSISSKGYHTLALLDNGTVLSWGSNMVGQLG 69

Query: 251 HGD-------TLDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCL 302
           +G        +  +P  + +   L+ + ++V + A   Y LA++ +G VY +G  ++  L
Sbjct: 70  NGKQGSNFSTSFAQPVYEKVNGELKVLANIVAVEASLQYSLALSADGTVYGWGLNASNKL 129

Query: 303 GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD-- 360
           G   +     P AI       I   ++SAG  H  AL   G V+ WG    GA+G+G+  
Sbjct: 130 GRPFEGTYYYPTAIPIAGLPPIE--QISAGVTHAAALAKDGTVWAWGDNQSGAVGNGNNG 187

Query: 361 ---------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
                    ++ K   E L+ +K     Q+ A    T  + + G + G+G+ G   LG  
Sbjct: 188 PLEYVERPVQVKKNASEFLTGIK-----QIHAGNWFTMAVTENGELLGWGYNGTYQLG-- 240

Query: 412 DRGVSDKVLRPRILDSLRA--HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
           D   + +      LD  +   + + ++STG  +T+ + + G L  +G N   QLG DTL+
Sbjct: 241 DLTTNSRSYPVHALDKNKNPLNGIKKVSTGNDYTLALKEDGTLLSWGVNGYGQLGSDTLQ 300

Query: 470 GC 471
           G 
Sbjct: 301 GT 302


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 137/277 (49%), Gaps = 12/277 (4%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +F P+ ++  +     +   G N T FLT  G V++CGSN +GQLGH     R  P+ ++
Sbjct: 22  VFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQP--RKRPQLVS 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRK 322
            L+   S++ +A G  + LA++  G V+S+GS +   LGH +    LQ  P+ I++  + 
Sbjct: 80  GLDAY-SIINVACGEMHSLALSRWGEVFSWGSDNYGQLGH-QLGGTLQIVPKLIKSLAK- 136

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLSSLKSHLAVQV 381
              VV+++AG  H VAL ++G ++ WG    G LG G     ++ P  + SL       +
Sbjct: 137 -YQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALI 195

Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
                 TF +  +G+V+G+G    G LG  D  VS K   P  L +LR   V  IS G  
Sbjct: 196 ACGANHTFAVSKSGAVFGWGKNINGQLGLNDT-VSKKF--PTQLRTLRNSRVRFISCGDE 252

Query: 442 HTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            +  +T  G +F  G     QLGH      + P ++ 
Sbjct: 253 FSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQVL 289



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 9/294 (3%)

Query: 110 SAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ 168
            A + M+   G  HTL ++ +  V+SCGS+  G LGH     +    + ++   A  ++ 
Sbjct: 32  EAKSVMKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQPRKRPQLVSGLD---AYSIIN 88

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           V+  E H+  + + G+VF+ G ++    GH+        P+L+++L      Q+ AG   
Sbjct: 89  VACGEMHSLALSRWGEVFSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRH 148

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
           +  LT  G +   G+N  GQLG G  T    TP ++  L  +   + IA G ++  AV+ 
Sbjct: 149 SVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFAL-IACGANHTFAVSK 207

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           +G V+ +G   N  LG  +   +  P  ++T R   +  +  S GDE    L   G V++
Sbjct: 208 SGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFI--SCGDEFSTFLTLDGGVFS 265

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGF 400
            G G  G LGHG   ++ LP  +  L      Q+ C R+     +   G VY +
Sbjct: 266 CGAGMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319



 Score = 44.3 bits (103), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 397 VYGFGWMGFGSLGFPDRGVSDK-VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           ++G+G    G LG    G+ ++ V  P+ LD   A  V + + G  HT+ +T  G+++  
Sbjct: 1   MFGWGSTIHGELGL--GGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSC 58

Query: 456 GDNERAQLGHDTLR 469
           G N+  QLGHD  R
Sbjct: 59  GSNDYGQLGHDQPR 72


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 127/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 29  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDCLSGKKIACL 79

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 80  SYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 139

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T ++P P+ +    +   VV IA G    +AV   
Sbjct: 140 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDT 199

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAW 257

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P+   K   + +  C     +      G VY +G
Sbjct: 258 GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 7/253 (2%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 289
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 36  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATT-EG 94

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 95  EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 153

Query: 350 KGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
               G +G G   ++ +P  ++  L++ + V +   +  +  +VDTG VY +G+ G G L
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQL 213

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
           G    G      R   L  +R   V +++ G  HT+V+TD G+++ +G N   QLG    
Sbjct: 214 GLGSSGNQPTPCRVSALQGIR---VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 469 RGCLEPTEIFIQE 481
                PT + +++
Sbjct: 271 SNQSYPTPVVVEK 283



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR ++ L G  + C    +G +    
Sbjct: 32  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDCLSGKKIACLSYGSGPHVV-L 89

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 149

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVDTGEVYVWGYN 208

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G   ++  P  +S+L+     +V      T VL D G VY +G   +G LG
Sbjct: 209 GNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 266


>gi|363733282|ref|XP_420476.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Gallus gallus]
          Length = 560

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 114/208 (54%), Gaps = 5/208 (2%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           +VQ++  ++H+  + + G +FT G N+    G    +  I +P+LV+ LKG+P  Q+ AG
Sbjct: 85  IVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGIPLAQIAAG 144

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
              +  +++ G V++ G N  GQLG G T DR  P  +  LE   +V  I+ G  +   +
Sbjct: 145 GAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEHWKAVF-ISCGEDHTAVL 203

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH-VVALDSSGY 344
           + NG+V++FG+G    LGH    +E +PR +      G  V  V+ G +H +V + S   
Sbjct: 204 SKNGLVFTFGAGGAGQLGHNSTRNEFRPRMVAELW--GARVSLVACGRQHTLVYVPSLDK 261

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           VY++G  Y G LG   + ++ +P P++S
Sbjct: 262 VYSFG-SYEGQLGSERKANQLIPLPINS 288



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 10/213 (4%)

Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL--QPRAIQTFRRKGIH 325
           E   +VQIA G  + +A++  G ++++G  ++  LG G Q D L  +P+ ++    KGI 
Sbjct: 81  ENNDIVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQ-DLLISKPQLVKGL--KGIP 137

Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
           + +++AG  H V +  SG VY+WGK   G LG G   D+  P  + +L+   AV +   +
Sbjct: 138 LAQIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEHWKAVFISCGE 197

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T VL   G V+ FG  G G LG      +    RPR++  L    VS ++ G  HT+V
Sbjct: 198 DHTAVLSKNGLVFTFGAGGAGQLG---HNSTRNEFRPRMVAELWGARVSLVACGRQHTLV 254

Query: 446 -VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
            V    +++ FG  E  QLG +     L P  I
Sbjct: 255 YVPSLDKVYSFGSYE-GQLGSERKANQLIPLPI 286



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 18/249 (7%)

Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRP--IFRPRLVEAL 214
           R+ F     V  ++  E H       G+++ C            T  P    + RLV+ L
Sbjct: 32  RVWFKGKEKVWCLNCDETHVLVCSCDGKLYECW-----------TTAPGKTSKLRLVKEL 80

Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVV 273
           +     Q+  G + +  L+  G + T G NTHGQLG G   L    P+ +  L+ +  + 
Sbjct: 81  ENNDIVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISKPQLVKGLKGI-PLA 139

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
           QIAAG ++ + V+ +G VYS+G      LG G   D   P  ++         V +S G+
Sbjct: 140 QIAAGGAHSVVVSLSGAVYSWGKNDFGQLGLGHTEDRDCPSYVEALEH--WKAVFISCGE 197

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLV 392
           +H   L  +G V+T+G G  G LGH    ++  P  ++ L  + +++  C R+     + 
Sbjct: 198 DHTAVLSKNGLVFTFGAGGAGQLGHNSTRNEFRPRMVAELWGARVSLVACGRQHTLVYVP 257

Query: 393 DTGSVYGFG 401
               VY FG
Sbjct: 258 SLDKVYSFG 266


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 127/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 53  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDALSGKKIACL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T ++P P+ +    +   VV IA G    +AV   
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNT 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   ++  P  I     +GI + RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGNQPTPCRIAAL--QGIRIQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P+   K  +  +  C     +      G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPAPVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 7/253 (2%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 289
           + T+   +   G+N  G LG GD      P+ +  L  +  + +   +GP  +LA T  G
Sbjct: 60  YTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATT-EG 118

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            V+++G  +   LG+G  +  L P  I T       V  V+ G  H + L S G V+ WG
Sbjct: 119 EVFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVTEVACGSYHSLVLTSDGEVFAWG 177

Query: 350 KGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
               G +G G   ++ +P  ++  L++ + V +   +  +  +V+TG VY +G+ G G L
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQL 237

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
           G    G      R   L  +R   + +++ G  HT+V+TD G+++ +G N   QLG    
Sbjct: 238 GLGSSGNQPTPCRIAALQGIR---IQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 294

Query: 469 RGCLEPTEIFIQE 481
                P  + +++
Sbjct: 295 SNQSYPAPVVVEK 307



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR ++AL G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDALSGKKIACLSYGSGPHIV-L 113

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V ++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+ ++G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSMAVVNTGEVYVWGYN 232

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 233 GNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 14/268 (5%)

Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
           N +QI  GR H + +++   +F+ GS+  G L      T      R+   S    VQV+ 
Sbjct: 122 NIVQIAAGRAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRV--VSLTETVQVAC 179

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
             +H   +++SG++F  G         +   R ++ P+ +E    +P  QV AG ++   
Sbjct: 180 GTDHTIAIVESGRIFVWG--------LQPDGRVLYAPKEIEFFMALPVVQVNAGSDYYVA 231

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
           LT+ G +   GSN +GQLG  D  +R TP  +  L  + +VV +A G S+ +A+T  G +
Sbjct: 232 LTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSL-NVVHVACGHSHTVALTHEGRL 290

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +  GS S   LG G +    Q   +      G HV RV+ G  H +AL + G +Y +G  
Sbjct: 291 FVCGSDSCGQLGSGRKVPS-QNTMLAVTEMLGTHVTRVACGRCHTLAL-AGGKMYAFGLN 348

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAV 379
             G LG G+   +  P P+ +L   ++V
Sbjct: 349 SSGQLGSGNVRSQVTPRPIDALTDVVSV 376



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 16/313 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V  ++  E H  F+   G+V++CG N +   G        F    V    GV   Q+ AG
Sbjct: 70  VRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVNIVQIAAG 129

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
                 +   G +   GSN+HGQL    +      PK +  L E    VQ+A G  + +A
Sbjct: 130 RAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTET---VQVACGTDHTIA 186

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +  +G ++ +G   +  + +        P+ I+ F    + VV+V+AG ++ VAL  SG 
Sbjct: 187 IVESGRIFVWGLQPDGRVLYA-------PKEIEFFM--ALPVVQVNAGSDYYVALTVSGA 237

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           ++ WG    G LG  D  ++T P  +++L S   V V      T  L   G ++  G   
Sbjct: 238 MFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDS 297

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G LG   +  S   +    +  +   HV++++ G  HT+ +   G+++ FG N   QLG
Sbjct: 298 CGQLGSGRKVPSQNTMLA--VTEMLGTHVTRVACGRCHTLALAG-GKMYAFGLNSSGQLG 354

Query: 465 HDTLRGCLEPTEI 477
              +R  + P  I
Sbjct: 355 SGNVRSQVTPRPI 367


>gi|345803705|ref|XP_547912.3| PREDICTED: serine/threonine-protein kinase Nek9 isoform 2 [Canis
           lupus familiaris]
          Length = 976

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 429
            V      TF+L  +G V   G   F  LG      G+ +      I           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLS 595

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 127/307 (41%), Gaps = 40/307 (13%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF     V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLNNPVEQVS 486

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 273
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIR 600

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 334 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 387 KTFVLVD 393
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLNNPVEQ 484

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 289
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNK 499

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 350 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 396
                 LG               EI  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 456 GDNERAQLGHDTLRGCLEPTE 476
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 196 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 255 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 305
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 306 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 365 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 417
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 395
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 341 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 388

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLY 448

Query: 454 GFGDNERAQLGHDTLRG--CLEPTEI 477
            FG +    +G D + G   LEP ++
Sbjct: 449 AFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
            (RCC1) repeat [Roseburia intestinalis XB6B4]
          Length = 1546

 Score =  107 bits (267), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 99/364 (27%), Positives = 165/364 (45%), Gaps = 33/364 (9%)

Query: 117  ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            ++ G YH+ +I+ + S++  G +  G +G G  T      T+I      HVV VS  + +
Sbjct: 744  LSLGDYHSGVIAQDGSLYMWGVNDFGQIGDG-TTKNRYKPTKI----LDHVVSVSLGDYY 798

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
            +  + Q G ++  G N     G   T       ++++ +  V     + G   +G +T  
Sbjct: 799  SGAITQDGSLYMWGSNVYGQIGDGTTEDRYKPTKILDHVIAV-----SLGYCHSGAITQD 853

Query: 236  GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
            G ++  GSN  GQ+G G T DR  P  I     +  V+ ++ G S+  A+T +G +Y +G
Sbjct: 854  GSLYMWGSNDSGQIGDGTTEDRYKPTKI-----LDHVIAVSLGVSHSGAITQDGSLYMWG 908

Query: 296  SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            S S   +G G      +P  I        HV+ VS    +  A+   G +Y WG    G 
Sbjct: 909  SNSRGGIGDGTTEVRYKPTKILD------HVIAVSLQTGNSGAITQDGSLYMWGSNVYGE 962

Query: 356  LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
            +G G E D+  P   + +  H+ + V      +  +   GS+Y +G   +G +G  D   
Sbjct: 963  IGDGTEEDRYKP---TKILDHV-IAVSLGDDHSGAITQDGSLYMWGRNYYGEIG--DGTE 1016

Query: 416  SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
             D+    +ILD     HV  +S G+ H+  +T  G L+ +G N   Q+G  T +    PT
Sbjct: 1017 EDRYKPTKILD-----HVIAVSLGVGHSGAITQDGSLYMWGWNSDGQIGDGTTKARYTPT 1071

Query: 476  EIFI 479
            +I I
Sbjct: 1072 QITI 1075



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 26/296 (8%)

Query: 115  MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
            + ++ G Y++  I+ + S++  GS++ G +G G  T      T+I      HV+ VS   
Sbjct: 790  VSVSLGDYYSGAITQDGSLYMWGSNVYGQIGDG-TTEDRYKPTKI----LDHVIAVSLGY 844

Query: 174  NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             H+  + Q G ++  G N S   G   T       ++++ +  V     + G++ +G +T
Sbjct: 845  CHSGAITQDGSLYMWGSNDSGQIGDGTTEDRYKPTKILDHVIAV-----SLGVSHSGAIT 899

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G ++  GSN+ G +G G T  R  P  I     +  V+ ++       A+T +G +Y 
Sbjct: 900  QDGSLYMWGSNSRGGIGDGTTEVRYKPTKI-----LDHVIAVSLQTGNSGAITQDGSLYM 954

Query: 294  FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
            +GS     +G G + D  +P  I        HV+ VS GD+H  A+   G +Y WG+ Y 
Sbjct: 955  WGSNVYGEIGDGTEEDRYKPTKILD------HVIAVSLGDDHSGAITQDGSLYMWGRNYY 1008

Query: 354  GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            G +G G E D+  P   + +  H+ + V      +  +   GS+Y +GW   G +G
Sbjct: 1009 GEIGDGTEEDRYKP---TKILDHV-IAVSLGVGHSGAITQDGSLYMWGWNSDGQIG 1060



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 18/218 (8%)

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTG-NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
           +I P   + S  Q+ +   Y   V   +G +Y +G      +G G   +  +P  I    
Sbjct: 730 TIRPDVGINSYSQVLSLGDYHSGVIAQDGSLYMWGVNDFGQIGDGTTKNRYKPTKILD-- 787

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
               HVV VS GD +  A+   G +Y WG    G +G G   D+  P  +      +++ 
Sbjct: 788 ----HVVSVSLGDYYSGAITQDGSLYMWGSNVYGQIGDGTTEDRYKPTKILDHVIAVSLG 843

Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
            C     +  +   GS+Y +G    G +G  D    D+    +ILD     HV  +S G+
Sbjct: 844 YC----HSGAITQDGSLYMWGSNDSGQIG--DGTTEDRYKPTKILD-----HVIAVSLGV 892

Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            H+  +T  G L+ +G N R  +G  T     +PT+I 
Sbjct: 893 SHSGAITQDGSLYMWGSNSRGGIGDGTTEVRYKPTKIL 930


>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
          Length = 531

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 5/286 (1%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 357 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
           G G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|395503881|ref|XP_003756290.1| PREDICTED: serine/threonine-protein kinase Nek9 [Sarcophilus
           harrisii]
          Length = 941

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 324 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 383

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 384 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQVDFF 442

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HV  L  +  VY+WG G  G LG   E D  +P+ +   K+ + V
Sbjct: 443 LNNPVE--QVSCGDNHVAVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDVPKALIIV 500

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDK--------VLRPRILDSLR 429
            V      TF+L  +G V   G   F  LG      G+ +              +   L 
Sbjct: 501 SVQCSCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHDAYHEVPYTTSFTLAKQLS 560

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 561 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 595



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 40/307 (13%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   +++F     V QVS
Sbjct: 395 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QVDFFLNNPVEQVS 451

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
             +NH A + ++ +V++ G      CG       D+    + P+ V+  K +    V   
Sbjct: 452 CGDNHVAVLTRNKEVYSWG------CGEYGRLGLDSEEDYYIPQKVDVPKALIIVSVQCS 505

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 273
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 506 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHDAYHEVPYTTSFTLAKQLSFYKIR 565

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 566 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 624

Query: 334 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 625 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHIPDLSC-RGW 683

Query: 387 KTFVLVD 393
            T ++V+
Sbjct: 684 HTILIVE 690



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 22/332 (6%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 364 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 422

Query: 196 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
            G      P +  P  V+     P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 423 MGVDKVAGPEVLEPMQVDFFLNNPVEQVSCGDNHVAVLTRNKEVYSWGCGEYGRLGLDSE 482

Query: 255 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 305
            D   P+ +  P   +   VQ +   +++L  +G  +          G N C+     H 
Sbjct: 483 EDYYIPQKVDVPKALIIVSVQCSCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHD 542

Query: 306 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 543 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 602

Query: 365 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 417
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 603 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 662

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
              RP I  SL  HH+  +S   +HT+++ ++
Sbjct: 663 SWPRP-IFGSL--HHIPDLSCRGWHTILIVEK 691



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 331 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 390

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  +D    + V Q
Sbjct: 391 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQVDFFLNNPVEQ 449

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H  V+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 450 VSCGDNHVAVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDV 493



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 148/371 (39%), Gaps = 47/371 (12%)

Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTC-- 188
           +V +  +S   V G G  T Q +   +    S     QV A   H A V    +++T   
Sbjct: 305 AVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVTVEKELYTWVN 360

Query: 189 ---GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
              G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T  G ++  GS+
Sbjct: 361 MQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSD 418

Query: 245 THGQLGHGDTLDRPT-PKSIAPLEE----VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
            +G +G    +D+   P+ + P++        V Q++ G +++  +T N  VYS+G G  
Sbjct: 419 YYGCMG----VDKVAGPEVLEPMQVDFFLNNPVEQVSCGDNHVAVLTRNKEVYSWGCGEY 474

Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
             LG   + D   P+ +     K + +V V    +    L  SG V   G      LG  
Sbjct: 475 GRLGLDSEEDYYIPQKVDV--PKALIIVSVQCSCDGTFLLTQSGKVLACGLNEFNKLGLN 532

Query: 360 D------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGSVYGFGWMGFG 406
                        E+  T    L+   S   ++  A  K  T  + + G +  FG    G
Sbjct: 533 QCMSGIINHDAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCG 592

Query: 407 SLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            LG    G   K L   +L   L    V ++S G   T+  TD   +F +G+    +L  
Sbjct: 593 QLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLA- 648

Query: 466 DTLRGCLEPTE 476
                 + PTE
Sbjct: 649 ------MTPTE 653



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 19/157 (12%)

Query: 328 RVSAGDEHVVALDSS--GYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCAR 384
           R S  +E  +A+ +S    VY WG G            K+ P+ L  +KS   A QVCA 
Sbjct: 295 RSSTVNETPIAVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAG 342

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYH 442
                V+     +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   
Sbjct: 343 NTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDF 402

Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 477
           TV VTD G+L+ FG +    +G D + G   LEP ++
Sbjct: 403 TVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQV 439


>gi|431839139|gb|ELK01066.1| Serine/threonine-protein kinase Nek9 [Pteropus alecto]
          Length = 964

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 124/265 (46%), Gaps = 16/265 (6%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 358 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 417

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 418 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVAKVAGPEVLEPMQLNFF 476

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 477 LNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVEVPKALIIV 534

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            V      TF+L  +G V   G   F  LG         ++   +  S     +  I+ G
Sbjct: 535 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGL--NQCMSGIINHEVGTSF---GIRTIAPG 589

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLG 464
             HT  + +RGRL  FG N+  QLG
Sbjct: 590 KTHTAAIDERGRLLTFGCNKCGQLG 614



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 126/298 (42%), Gaps = 37/298 (12%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF     V QVS
Sbjct: 429 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVAKVAGPEVLEPM---QLNFFLNNPVEQVS 485

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
             +NH   + ++ +V++ G      CG       D+    + P+ VE  K +    V  G
Sbjct: 486 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVEVPKALIIVAVQCG 539

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS---VVQIAAGPSYM 282
            + T  LT  G V  CG N   +LG    +      S     EVG+   +  IA G ++ 
Sbjct: 540 CDGTFLLTQSGKVLACGLNEFNKLGLNQCM------SGIINHEVGTSFGIRTIAPGKTHT 593

Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
            A+   G + +FG      LG G     L    +      G  V+RVS GDE  +A    
Sbjct: 594 AAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFTIAATDD 652

Query: 343 GYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
            +++ WG G  G L        HG +I  + P P+     H+    C R   T ++V+
Sbjct: 653 NHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTILIVE 709



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 154/373 (41%), Gaps = 46/373 (12%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 329 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 384

Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 385 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 442

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE----EVGSVVQIAAGPSYMLAVTGNGV 290
            G ++  GS+ +G +G         P+ + P++        V Q++ G ++++ +T N  
Sbjct: 443 EGQLYAFGSDYYGCMGVAKVAG---PEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKE 499

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           VYS+G G    LG   + D   P+ ++    K + +V V  G +    L  SG V   G 
Sbjct: 500 VYSWGCGEYGRLGLDSEEDYYTPQKVEV--PKALIIVAVQCGCDGTFLLTQSGKVLACGL 557

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSH-----LAVQVCAR-KRKTFVLVDTGSVYGFGWMG 404
                LG        L + +S + +H       ++  A  K  T  + + G +  FG   
Sbjct: 558 NEFNKLG--------LNQCMSGIINHEVGTSFGIRTIAPGKTHTAAIDERGRLLTFGCNK 609

Query: 405 FGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
            G LG    G   K L   +L   L    V ++S G   T+  TD   +F +G+    +L
Sbjct: 610 CGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRL 666

Query: 464 GHDTLRGCLEPTE 476
                   + PTE
Sbjct: 667 A-------MTPTE 672



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 365 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 424

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G   +    +VL P  L+    + V Q
Sbjct: 425 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVA-KVAGPEVLEPMQLNFFLNNPVEQ 483

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 484 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVEV 527


>gi|444511454|gb|ELV09900.1| Serine/threonine-protein kinase Nek9 [Tupaia chinensis]
          Length = 674

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 23/276 (8%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 165 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 224

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 225 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 283

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 284 LNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 341

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-----------RILDSL 428
            V      TF+L  +G V   G   F  LG  ++ +S  +               +   L
Sbjct: 342 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGL-NQCMSGIINHEAYHEVPYTTSFTLAKQL 400

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 401 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 436



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 172 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 231

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 232 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLNNPVEQ 290

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 291 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 334



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 21/174 (12%)

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
           DEL  R +   RR+   V          V    +  VY WG G            K+ P+
Sbjct: 123 DELLDRPLLRKRRRSSTVTEAPIA----VVTSRTSEVYVWGGG------------KSTPQ 166

Query: 369 PLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRIL 425
            L  +KS   A QVCA      V+     +Y +  M  G+      G  DK    +P+ +
Sbjct: 167 KLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHV 226

Query: 426 DSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 477
           + L+   + Q+S G   TV VTD G+L+ FG +    +G D + G   LEP ++
Sbjct: 227 EKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQL 280


>gi|282163157|ref|YP_003355542.1| hypothetical protein MCP_0487 [Methanocella paludicola SANAE]
 gi|282155471|dbj|BAI60559.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 444

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 28/328 (8%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V +++A   H   +   G V+  G N     G    N     P  V  L GV  K + AG
Sbjct: 73  VRKIAAGYGHVLALKGDGTVWAWGSNKYGQLGDGTYNDSA-GPVQVAGLTGV--KAIAAG 129

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            + +  L   G V   GSN++GQ+G G    + T   I  ++ + ++  I+AG S+ LA 
Sbjct: 130 KDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQ-VKGLNNIQAISAGGSHCLAS 188

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
            G+G V+++G   +  LG G       P      R K  +V+ + AGD H +A+   G V
Sbjct: 189 QGDGAVWAWGDNRHGVLGDGTNESRFTP-----VRSKIYNVMGLDAGDAHALAVMVDGNV 243

Query: 346 YTWGKGYCGALGHGD-------------EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           ++WG  Y G LG G              E D   P+ +  L    +V V A    +  L 
Sbjct: 244 WSWGYNYNGQLGMGGTSLNDLGRLSFGPEADSFNPDIVRGLSGVKSVAVGA--SHSVALA 301

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
           D G+V+ +G    G LG    G SD  +  R+      + ++ +  GLYHT+ + D G +
Sbjct: 302 DNGTVWTWGSNSDGQLGVGKTGGSDMTVPVRVSG---INGITAVDAGLYHTLALKDDGSV 358

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
           + +G N   Q+G+ +      P  + +Q
Sbjct: 359 WAWGSNAEGQVGNRSASAG-SPALVLMQ 385



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 14/212 (6%)

Query: 253 DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ 312
           D ++  TP+ +    E+  V +IAAG  ++LA+ G+G V+++GS     LG G  +D   
Sbjct: 58  DGVEYATPQKV----EISVVRKIAAGYGHVLALKGDGTVWAWGSNKYGQLGDGTYNDSAG 113

Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
           P  +Q     G+    ++AG +  +AL   G V+ WG    G +G G    K    P+  
Sbjct: 114 P--VQVAGLTGVKA--IAAGKDISLALKGDGTVWAWGSNSYGQVGEGSLNYKGTAVPIQV 169

Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
              +    + A           G+V+ +G    G LG    G ++    P      + ++
Sbjct: 170 KGLNNIQAISAGGSHCLASQGDGAVWAWGDNRHGVLG---DGTNESRFTPV---RSKIYN 223

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           V  +  G  H + V   G ++ +G N   QLG
Sbjct: 224 VMGLDAGDAHALAVMVDGNVWSWGYNYNGQLG 255


>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Canis lupus familiaris]
          Length = 531

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 116/286 (40%), Gaps = 5/286 (1%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 357 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
           G G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  +   +  +
Sbjct: 58  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 108

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 109 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 168

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T+++P P+ +    +   VV IA G    +AV   
Sbjct: 169 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 228

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 229 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 286

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 287 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 37  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 95

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 96  RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 153

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G V+ WG    G +G G  +++ +P  ++  L++ + V
Sbjct: 154 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 213

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +     +VDTG VY +G+ G G LG  + G      R   L  +R   V +++ G
Sbjct: 214 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 270

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 271 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 312



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 61  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 118

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 119 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 178

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    +A+  +G VY WG  
Sbjct: 179 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 237

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G+  ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 295


>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 823

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 15/357 (4%)

Query: 120 GRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAF 178
           G  +TL+   + SV++ G++  G LG G    +  S   ++F +   V +V+A  +HA  
Sbjct: 45  GEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYRLAS-APVDFSNGMVVKRVAAGGSHALA 103

Query: 179 VLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHV 238
           VL    ++  G N     G   T    F P  V    GV    + A    +  +   G V
Sbjct: 104 VLSDKTLWAWGRNGDGQLGVGSTTSS-FSPVKVPGRTGVEVVAMAASTFNSAAVLSDGKV 162

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
            T G N +GQLG+G T D+ +P  ++ L ++  V   + G  +MLA+   G V+++G   
Sbjct: 163 LTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGV---SVGKYHMLALRSGGTVWAWGFNG 219

Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
           +  LG G   +       Q    KG  V  VSAGD H +AL   G V+ WG+   G LG 
Sbjct: 220 SGQLGLGSGSNTQYNTPQQAAVLKG--VASVSAGDSHSLALRWDGTVWAWGQNNQGQLGI 277

Query: 359 GDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
           G   D+  P P+   +    V+V A +     L   G+V+ +G+ G G LG    G +  
Sbjct: 278 GSFTDR--PSPVQVPRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQLG---DGTTLS 332

Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
              P  +  L    V  ++ G  H+V V   GR++ +G N   QLG  +      PT
Sbjct: 333 RSSPVQVPGLTG--VVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDALPHPT 387



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 158/359 (44%), Gaps = 20/359 (5%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G   TL   N   +++ G +  G LG    T   ++   ++  S   V  V+A   
Sbjct: 464 RLVAGAKFTLFQKNDGKLWAWGHNFSGQLGD-DSTVNRLTPVSVSTASLTDVKNVAAGGF 522

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+  +   G++++ G NS    G    +R     R   AL       V      T  L +
Sbjct: 523 HSLALGSDGKLWSWGSNSLSQLG---VSRDTLGSRASPALVSGVSGVVAVAAGETHSLVV 579

Query: 235 --RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGV 290
              G V   G N +GQ+G G +   PT    +P E     S++ +AAG ++ LA+  +G 
Sbjct: 580 LSNGKVSAWGYNGYGQIGDGCS-PVPTFYCSSPTEPTNLFSILGVAAGQNHSLALRSDGT 638

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+++G  ++  LG G   D  +P  +    R    VV V AG  H +AL S G V+ WG 
Sbjct: 639 VWAWGRNNSGQLGDGSLVDRTRPVQVARLNR----VVSVVAGLYHSLALRSDGTVWAWGD 694

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
              G LG G    + LP  +  L     V V A  R +  L   G+V+ +G+   G +G 
Sbjct: 695 NGSGQLGDGTYFGQMLPVQVPGLSG--VVAVAAGGRHSLALRADGTVWAWGYNSNGQIG- 751

Query: 411 PDRGVSDKVLRPRILDSLRAHH--VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
            D   +  + RP  +  L +    V  ++ G  H+V V   GR+  +G N+  QLG+ T
Sbjct: 752 -DGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDSGQLGYAT 809



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 131/293 (44%), Gaps = 33/293 (11%)

Query: 189 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
           GD  SF C        +  PRLV            AG  FT F    G +   G N  GQ
Sbjct: 451 GDGCSFVC-------RLETPRLV------------AGAKFTLFQKNDGKLWAWGHNFSGQ 491

Query: 249 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
           LG   T++R TP S++    +  V  +AAG  + LA+  +G ++S+GS S   LG     
Sbjct: 492 LGDDSTVNRLTPVSVS-TASLTDVKNVAAGGFHSLALGSDGKLWSWGSNSLSQLG--VSR 548

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-- 366
           D L  RA          VV V+AG+ H + + S+G V  WG    G +G G     T   
Sbjct: 549 DTLGSRASPALVSGVSGVVAVAAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYC 608

Query: 367 --PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
             P   ++L S L V   A +  +  L   G+V+ +G    G LG  D  + D   R R 
Sbjct: 609 SSPTEPTNLFSILGV--AAGQNHSLALRSDGTVWAWGRNNSGQLG--DGSLVD---RTRP 661

Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
           +   R + V  +  GLYH++ +   G ++ +GDN   QLG  T  G + P ++
Sbjct: 662 VQVARLNRVVSVVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPVQV 714



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 119/255 (46%), Gaps = 22/255 (8%)

Query: 123 HTLLI-SNSSVFSCGSSLCGVLGHG---PETTQCVSFTR-INFPSAAHVVQVSASENHAA 177
           H+L++ SN  V + G +  G +G G     T  C S T   N  S   ++ V+A +NH+ 
Sbjct: 575 HSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSPTEPTNLFS---ILGVAAGQNHSL 631

Query: 178 FVLQSGQVFTCGDNSSFCCGHR---DTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
            +   G V+  G N+S   G     D  RP+   RL   +       V AGL  +  L  
Sbjct: 632 ALRSDGTVWAWGRNNSGQLGDGSLVDRTRPVQVARLNRVVS------VVAGLYHSLALRS 685

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQLG G    +  P  +  L     VV +AAG  + LA+  +G V+++
Sbjct: 686 DGTVWAWGDNGSGQLGDGTYFGQMLPVQVPGLS---GVVAVAAGGRHSLALRADGTVWAW 742

Query: 295 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           G  SN  +G G     + +P  ++        V+ V+AGD H VA+ S G V TWG+   
Sbjct: 743 GYNSNGQIGDGSDASIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGGRVRTWGQNDS 802

Query: 354 GALGHG-DEIDKTLP 367
           G LG+  +  D++ P
Sbjct: 803 GQLGYATNNTDRSTP 817



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 122/306 (39%), Gaps = 56/306 (18%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQ-IAAG 278
           +  AG  +T      G V T G+N+ GQLG G T  R    + AP++   G VV+ +AAG
Sbjct: 41  RAAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTAYR---LASAPVDFSNGMVVKRVAAG 97

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
            S+ LAV  +  ++++G   +  LG G       P  ++   R G+ VV ++A   +  A
Sbjct: 98  GSHALAVLSDKTLWAWGRNGDGQLGVGSTTSSFSP--VKVPGRTGVEVVAMAASTFNSAA 155

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           + S G V TWG    G LG+G   D++ P  +S+L     V V   K     L   G+V+
Sbjct: 156 VLSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSDIKGVSV--GKYHMLALRSGGTVW 213

Query: 399 GFG-------------------------------------------WMG----FGSLGFP 411
            +G                                           W G    +G     
Sbjct: 214 AWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLALRWDGTVWAWGQNNQG 273

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
             G+     RP  +   R   V +++ G +H + +   G ++ +G N   QLG  T    
Sbjct: 274 QLGIGSFTDRPSPVQVPRLTGVVEVAAGQFHALALRLDGTVWAWGFNGSGQLGDGTTLSR 333

Query: 472 LEPTEI 477
             P ++
Sbjct: 334 SSPVQV 339


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 140/300 (46%), Gaps = 11/300 (3%)

Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           + +S  + H A +  + +++  G N+    G   +   ++RP  V+ALK    K    G 
Sbjct: 34  IYLSCGDEHTALITGNNKLYMFGSNNWGQLG-LGSKSAVYRPICVKALKSEKVKLAACGR 92

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           N T   T  G+V+  G N  GQLG GDT +R +   I+       + Q++AG +   A+T
Sbjct: 93  NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISAALT 152

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++ +G  S   +G     +   PR +      G  +  +S G  H   +   G +Y
Sbjct: 153 EDGELFMWGDNSEGQIGLNSISNVYVPRQVTV----GKPISWISCGYYHSAFVTMEGKLY 208

Query: 347 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           T+G+  CG LG   E  I+   P+ +S + S   +QV      T VL +  +VY FG   
Sbjct: 209 TFGEPECGKLGLPSEQLINHRKPQLVSGI-SEKVIQVACGGGHTVVLTEK-AVYTFGQGR 266

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           FG LG        +   P IL+ ++   +  IS G  HT ++TD G ++ FGD    +LG
Sbjct: 267 FGQLGLG--SFIFQAPEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLG 324



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 14/247 (5%)

Query: 120 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 177
           GR HTL+ +   +V++ G +  G LG G +T +  SF  I+F ++ H + Q+SA  N +A
Sbjct: 91  GRNHTLVSTEGGNVYATGGNNEGQLGLG-DTEERNSFHLISFFTSRHKIKQLSAGANISA 149

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + G++F  GDNS    G    +  ++ PR V    G P   ++ G   + F+T+ G 
Sbjct: 150 ALTEDGELFMWGDNSEGQIGLNSISN-VYVPRQVTV--GKPISWISCGYYHSAFVTMEGK 206

Query: 238 VHTCGSNTHGQLG--HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           ++T G    G+LG      ++   P+ ++ + E   V+Q+A G  + + +T    VY+FG
Sbjct: 207 LYTFGEPECGKLGLPSEQLINHRKPQLVSGISE--KVIQVACGGGHTVVLT-EKAVYTFG 263

Query: 296 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
            G    LG G       +P  ++  + + I    +S G+ H   +   G++YT+G G  G
Sbjct: 264 QGRFGQLGLGSFIFQAPEPAILEHVKDQKIR--HISCGENHTALITDVGHMYTFGDGRHG 321

Query: 355 ALGHGDE 361
            LG G E
Sbjct: 322 KLGLGLE 328



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 4/154 (2%)

Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARK 385
           + +S GDEH   +  +  +Y +G    G LG G +     P  + +LKS  + +  C R 
Sbjct: 34  IYLSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRN 93

Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
             T V  + G+VY  G    G LG  D    +         S   H + Q+S G   +  
Sbjct: 94  H-TLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTS--RHKIKQLSAGANISAA 150

Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +T+ G LF +GDN   Q+G +++     P ++ +
Sbjct: 151 LTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTV 184



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 12/142 (8%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASE 173
           I+ G YH+  ++    +++ G   CG LG   E  Q ++  +    S  +  V+QV+   
Sbjct: 191 ISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSE--QLINHRKPQLVSGISEKVIQVACGG 248

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFTG 230
            H   VL    V+T G       G       IF+   P ++E +K    + ++ G N T 
Sbjct: 249 GHTV-VLTEKAVYTFGQGR---FGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTA 304

Query: 231 FLTIRGHVHTCGSNTHGQLGHG 252
            +T  GH++T G   HG+LG G
Sbjct: 305 LITDVGHMYTFGDGRHGKLGLG 326


>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
           domestica]
          Length = 531

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           G+VY++G      LG+G  +  + P  IQ      I  V+ V+ G  H +AL + G VY 
Sbjct: 94  GMVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVIEVACGSHHSMALAADGEVYA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P +I +++
Sbjct: 269 NKSNLLSPAQIMVEK 283



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S N A +V  + +VF  G N S C G  D N+    P+ +EAL G   K ++ G      
Sbjct: 30  SANEAIYVTHNDEVFVFGLNCSNCLGTGD-NQSTIVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+   G V+  G N + QLG+G T     P  +     +  V+++A G  + +A+  +G 
Sbjct: 89  LSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGE 148

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           VY++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVSIACGQTSSMAVLDNGEVYG 204

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    G LG G+  ++  P  +++L S   +Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 408 LGFPDRGVSDKVLRP 422
           LG    G    +L P
Sbjct: 265 LG---TGNKSNLLSP 276



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V+  G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V+++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPCRVAALH--SVCVLQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKSNLLSPAQIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H++ L ++  V++ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 IEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALT 249

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 291
             G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKSNLLSPAQI--MVEKERVVEIAACHSAHTSAAKTQGGHV 307

Query: 292 YSFG 295
           Y +G
Sbjct: 308 YMWG 311


>gi|358345377|ref|XP_003636756.1| Chromosome condensation regulator protein [Medicago truncatula]
 gi|355502691|gb|AES83894.1| Chromosome condensation regulator protein [Medicago truncatula]
          Length = 1170

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 137/315 (43%), Gaps = 38/315 (12%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           HA+ V + G+VFT G+ S    GH    + + +PRLVEAL       V  G   +  +T+
Sbjct: 356 HASLVTRQGEVFTWGEESGGRLGH-GVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTM 414

Query: 235 RGHVHTCGSNTH--GQLGHGDTLDRPTPKSIA-PLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            G ++T G  TH  G LGHG       PK I  PL+ +  V  +A GP +   +T  G  
Sbjct: 415 TGELYTWGDGTHNAGLLGHGSNASHWIPKRIGGPLDGL-QVSFVACGPWHTALITSTG-- 471

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD----------- 340
                          + +   PR + +    G+  + V+ G  H  A+            
Sbjct: 472 ---------------KENVSYPREVDSLL--GLRTIAVACGVWHTAAVVEVIATQSIASL 514

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
           SSG ++TWG G    LGHGD+  +  P  + ++  +   ++      T  L  TG V+  
Sbjct: 515 SSGKLFTWGDGDKNRLGHGDKESRLNPTCVPAIIDYDFKKIACGHSLTVGLTTTGRVFTM 574

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
           G   +G LG P    SD  L   + D +    V +IS G YH  V+T +  ++ +G    
Sbjct: 575 GSTVYGQLGNPQ---SDGKLPCLVGDKIALESVEEISCGAYHVAVLTSKNEVYTWGKGSN 631

Query: 461 AQLGHDTLRGCLEPT 475
            +LGH  L     PT
Sbjct: 632 GRLGHGDLEDRKTPT 646



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 156/413 (37%), Gaps = 84/413 (20%)

Query: 28  SAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCN 87
           S  D   + ++S T   SHG  P  + +L D+         +I  G  ++V       C 
Sbjct: 277 SGTDTVRVSVSSAT--SSHGSAPDDYDALADVYIWGEIICENIKVGADKSVHF-----C- 328

Query: 88  GNWKRVLRFLQSVEHSSDIVETSAGNQMQITTG-RYHTLLISNSSVFSCGSSLCGVLGHG 146
               R    L     S+ +++        I  G R+ +L+     VF+ G    G LGHG
Sbjct: 329 ---PRADVLLPRPLESNVVLDV-----QHIACGVRHASLVTRQGEVFTWGEESGGRLGHG 380

Query: 147 -------PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGD--------- 190
                  P   + ++ T ++F        V+  E H+  V  +G+++T GD         
Sbjct: 381 VGKNVVQPRLVEALTSTTVDF--------VACGEFHSCAVTMTGELYTWGDGTHNAGLLG 432

Query: 191 ---NSS------------------FCCGHRDT-------NRPIFRPRLVEALKGVPCKQV 222
              N+S                    CG   T          +  PR V++L G+    V
Sbjct: 433 HGSNASHWIPKRIGGPLDGLQVSFVACGPWHTALITSTGKENVSYPREVDSLLGLRTIAV 492

Query: 223 TAGLNFTGFLT-----------IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS 271
             G+  T  +              G + T G     +LGHGD   R  P  +  + +   
Sbjct: 493 ACGVWHTAAVVEVIATQSIASLSSGKLFTWGDGDKNRLGHGDKESRLNPTCVPAIIDY-D 551

Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
             +IA G S  + +T  G V++ GS     LG+ +   +L          + +    +S 
Sbjct: 552 FKKIACGHSLTVGLTTTGRVFTMGSTVYGQLGNPQSDGKLPCLVGDKIALESVE--EISC 609

Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQVCA 383
           G  HV  L S   VYTWGKG  G LGHGD  D+  P  + +LK  H+    CA
Sbjct: 610 GAYHVAVLTSKNEVYTWGKGSNGRLGHGDLEDRKTPTLVEALKDRHVKYIACA 662



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 6/176 (3%)

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
           A VV+V A+++ A+  L SG++FT GD      GH D    +  P  V A+     K++ 
Sbjct: 500 AAVVEVIATQSIAS--LSSGKLFTWGDGDKNRLGHGDKESRL-NPTCVPAIIDYDFKKIA 556

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
            G + T  LT  G V T GS  +GQLG+  + D   P  +     + SV +I+ G  ++ 
Sbjct: 557 CGHSLTVGLTTTGRVFTMGSTVYGQLGNPQS-DGKLPCLVGDKIALESVEEISCGAYHVA 615

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            +T    VY++G GSN  LGHG+  D   P  ++  + +  HV  ++    +  A+
Sbjct: 616 VLTSKNEVYTWGKGSNGRLGHGDLEDRKTPTLVEALKDR--HVKYIACASNYSAAI 669



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 96/230 (41%), Gaps = 44/230 (19%)

Query: 265 PLEE--VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK 322
           PLE   V  V  IA G  +   VT  G V+++G  S   LGHG   + +QPR ++     
Sbjct: 338 PLESNVVLDVQHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALTST 397

Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGY--CGALGHGDEIDKTLPE----PLSSLKSH 376
            +  V  + G+ H  A+  +G +YTWG G    G LGHG      +P+    PL  L+  
Sbjct: 398 TVDFV--ACGEFHSCAVTMTGELYTWGDGTHNAGLLGHGSNASHWIPKRIGGPLDGLQVS 455

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
               V      T ++  TG                     + V  PR +DSL       +
Sbjct: 456 F---VACGPWHTALITSTG--------------------KENVSYPREVDSLLGLRTIAV 492

Query: 437 STGLYHTVVVTD-----------RGRLFGFGDNERAQLGHDTLRGCLEPT 475
           + G++HT  V +            G+LF +GD ++ +LGH      L PT
Sbjct: 493 ACGVWHTAAVVEVIATQSIASLSSGKLFTWGDGDKNRLGHGDKESRLNPT 542


>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
           porcellus]
          Length = 531

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D+G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L    V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPMRVAALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLNPEHIMVEK 283



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 5/286 (1%)

Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
           T+      +  N  VF  G +    LG G   +  V   ++       +  +S  S  H 
Sbjct: 29  TSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
               + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L   G
Sbjct: 88  LLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V   G N  GQ+G G T ++PTP+ +     V  VV IA G +  +AV  +G VY +G 
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGY 207

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
             N  LG G   ++L P  +    R  + V ++  G  H +AL   G +Y WG    G L
Sbjct: 208 NGNGQLGLGNNGNQLTPMRVAALHR--VCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265

Query: 357 GHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
           G G++ +   PE +   K  +  +  C     +      G VY +G
Sbjct: 266 GTGNKNNLLNPEHIMVEKERVVEIAACHSTHISAAKTQGGHVYMWG 311


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 131/295 (44%), Gaps = 20/295 (6%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   +   G+VFT G  SS   GH D    I  P+LV         Q  AG + +GF++ 
Sbjct: 59  HVIALTSGGKVFTWGRGSSGQLGHGDILN-ITLPKLVSFFDDSVITQAAAGWSHSGFVSD 117

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G + TCG+ + GQLGHGDTL   TP  ++      SV  +A G  + L +     V  F
Sbjct: 118 SGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNN-DSVKMVACGMRHSLVLFAGNQVCGF 176

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           GSG    LG      +           K + VVR+SA  +H  A+ + G  ++WG+G+CG
Sbjct: 177 GSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRGFCG 236

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF-PDR 413
             G      ++LP PLS        +V        +L   G V+  G     +L   P++
Sbjct: 237 --GPDVHAPQSLPSPLS------FREVAVGWNHALLLTVDGEVFKLG----STLNKQPEK 284

Query: 414 GV----SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
                 S + L  ++ D      V QI+ G  H+  VT+ G +  +G  E  QLG
Sbjct: 285 QQLQIDSSEALFEKVPD-FDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLG 338



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 5/179 (2%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+S+G+G++  LG  +  DEL P+ +       I ++  + G  HV+AL S G V+TWG+
Sbjct: 17  VWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISML--ACGGAHVIALTSGGKVFTWGR 74

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
           G  G LGHGD ++ TLP+ +S     +  Q  A    +  + D+G ++  G   FG LG 
Sbjct: 75  GSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGH 134

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
            D   +  +  P  +       V  ++ G+ H++V+    ++ GFG  +R QLG  + R
Sbjct: 135 GD---TLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDR 190



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 125/301 (41%), Gaps = 54/301 (17%)

Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           G +   L S   VF+ G    G LGHG +         ++F   + + Q +A  +H+ FV
Sbjct: 57  GAHVIALTSGGKVFTWGRGSSGQLGHG-DILNITLPKLVSFFDDSVITQAAAGWSHSGFV 115

Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
             SG +FTCG+ S    GH DT   +  P  V        K V  G+  +  L     V 
Sbjct: 116 SDSGCIFTCGNGSFGQLGHGDT-LSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVC 174

Query: 240 TCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
             GS   GQLG      +    P  ++ L++V  VV+I+A   +  A++ +G  +S+G G
Sbjct: 175 GFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDV-EVVRISANGDHSAAISADGQFFSWGRG 233

Query: 298 SNFCLG------------------------------HGE------------QHDELQPRA 315
             FC G                               GE            +  +LQ  +
Sbjct: 234 --FCGGPDVHAPQSLPSPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDS 291

Query: 316 IQTFRRK-----GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
            +    K     G+ V++++AG EH  A+  +G V TWG G  G LG G+  D+T PE +
Sbjct: 292 SEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGNTNDQTSPELV 351

Query: 371 S 371
           S
Sbjct: 352 S 352


>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1055

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 153/350 (43%), Gaps = 56/350 (16%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H+ F+L  G V+TCG N    CG    N+P   P LV AL       V+ G   +  +  
Sbjct: 44  HSVFLLHDGSVYTCGSNG---CGQLGHNKPGTSPELVGALDTQRITLVSCGQAHSMAVNE 100

Query: 235 RGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           +G V   G+   GQLG G T      P+ I  L +   + Q+  G  + +A++ +G +++
Sbjct: 101 QGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCD-HRIAQVMCGNQHCIALSKDGQLFT 159

Query: 294 FGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +G  ++  LG G+ +  +L P+ +++    GI + +++AG +H  AL  SG V+ WGK  
Sbjct: 160 WGQNTSGQLGLGKGEPSKLFPQPLKSL--AGIPLAKITAGGDHSFALSLSGAVFGWGKNK 217

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQV------------------------------- 381
            G LG  D  D+ +P  +  L+S   V +                               
Sbjct: 218 AGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSN 277

Query: 382 --------CARKRKTFVLV---DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
                   C+   +  +L+     G ++ FG   +G LG    G +   L PR +  L  
Sbjct: 278 PFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLG---HGSTSNELLPRRVLELMG 334

Query: 431 HHVSQISTGLYHTVVVT-DRGRLFGFGDNERAQLGHDTLRG--CLEPTEI 477
             VSQI+ G +HT+      G ++ FG N   QLG   L    CL P +I
Sbjct: 335 TEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGELSAEKCLYPVKI 384


>gi|340379689|ref|XP_003388359.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 1950

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 121/269 (44%), Gaps = 23/269 (8%)

Query: 214 LKGVPC------KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
           LK  P       + + AG   T  +   G +  CG  ++G+LG G +  + + K +    
Sbjct: 90  LKATPVPHMNNIQSIIAGQYCTFMVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFP 149

Query: 268 E---VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI 324
           E   V S+        + LAV  NG VYS+G G    LGHG    +  P+ I     K I
Sbjct: 150 EGTLVKSMATSRGSDGHSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSNKVI 209

Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGY--------CGALGHGDEIDKTLPEPLSSLKSH 376
               VS G+ H  A+     ++TWG+G          G LGHGD   +  P+ + +LK  
Sbjct: 210 R--SVSCGNRHSAAVTIDNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALKGQ 267

Query: 377 LAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI 436
           L  +V A  + +  L  TG +Y FG      LG PD   S     P+++ SL    +  +
Sbjct: 268 LIQKVSAANQFSIALTKTGKLYSFGKGSGTGLGTPDTSYS----TPQLIQSLADVIIIDV 323

Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGH 465
           +TG  H + +T RG ++G+G N   Q G 
Sbjct: 324 TTGDGHCLALTQRGDVYGWGTNSMGQCGQ 352



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 119/261 (45%), Gaps = 19/261 (7%)

Query: 112 GNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 170
            N   I  G+Y T ++  N S+  CG    G LG G    Q        FP    V  ++
Sbjct: 99  NNIQSIIAGQYCTFMVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFPEGTLVKSMA 158

Query: 171 AS---ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
            S   + H+  V ++G+V++ G+      GH + N     P+L+  L     + V+ G  
Sbjct: 159 TSRGSDGHSLAVDKNGKVYSWGEGEYGKLGHGN-NTTQKTPKLIAGLSNKVIRSVSCGNR 217

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDT--------LDRPTPKSIAPLEEVGSVVQ-IAAG 278
            +  +TI   + T G   HG+LGHGDT          +  PK I  L+  G ++Q ++A 
Sbjct: 218 HSAAVTIDNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALK--GQLIQKVSAA 275

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             + +A+T  G +YSFG GS   LG  +      P+ IQ+     + ++ V+ GD H +A
Sbjct: 276 NQFSIALTKTGKLYSFGKGSGTGLGTPDTSYS-TPQLIQSL--ADVIIIDVTTGDGHCLA 332

Query: 339 LDSSGYVYTWGKGYCGALGHG 359
           L   G VY WG    G  G G
Sbjct: 333 LTQRGDVYGWGTNSMGQCGQG 353



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 14/221 (6%)

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V++ G   +G+LGHG+   + TPK IA L     +  ++ G  +  AVT +  ++++
Sbjct: 173 NGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSN-KVIRSVSCGNRHSAAVTIDNELWTW 231

Query: 295 GSGSNFCLGHGEQ--------HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
           G G +  LGHG+           +++P+ I+    KG  + +VSA ++  +AL  +G +Y
Sbjct: 232 GEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEAL--KGQLIQKVSAANQFSIALTKTGKLY 289

Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           ++GKG    LG  D    T P+ + SL   + + V         L   G VYG+G    G
Sbjct: 290 SFGKGSGTGLGTPDTSYST-PQLIQSLADVIIIDVTTGDGHCLALTQRGDVYGWGTNSMG 348

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
             G      ++ + +P  ++ L    V QIS G  H++V T
Sbjct: 349 QCGQGHN--NNSISKPGKVEGLDGVQVQQISAGTSHSIVWT 387



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 22/251 (8%)

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDT--LDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
           + F G L    +    GSN+  QL  G T  L + TP     +  + ++  I AG     
Sbjct: 60  MEFIGQLICEAYAF--GSNSSHQLAMGSTEKLLKATP-----VPHMNNIQSIIAGQYCTF 112

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR----KGIHVVRVSAGDEHVVAL 339
            V  NG +   G GS   LG G    +   + + TF      K +   R S G  H +A+
Sbjct: 113 MVLHNGSMKCCGKGSYGRLGLGTSDVQTSIKDLDTFPEGTLVKSMATSRGSDG--HSLAV 170

Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVY 398
           D +G VY+WG+G  G LGHG+   +  P+ ++ L + +   V C  +    V +D   ++
Sbjct: 171 DKNGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSNKVIRSVSCGNRHSAAVTID-NELW 229

Query: 399 GFGWMGFGSLGFPD-----RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            +G    G LG  D      G + K ++P+++++L+   + ++S     ++ +T  G+L+
Sbjct: 230 TWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALKGQLIQKVSAANQFSIALTKTGKLY 289

Query: 454 GFGDNERAQLG 464
            FG      LG
Sbjct: 290 SFGKGSGTGLG 300



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 18/244 (7%)

Query: 123 HTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
           H+L +  N  V+S G    G LGHG  TTQ      I   S   +  VS    H+A V  
Sbjct: 166 HSLAVDKNGKVYSWGEGEYGKLGHGNNTTQKTP-KLIAGLSNKVIRSVSCGNRHSAAVTI 224

Query: 182 SGQVFTCGDNSSFCCGHRDTNR-------PIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
             +++T G+      GH DT R          +P+++EALKG   ++V+A   F+  LT 
Sbjct: 225 DNELWTWGEGEHGRLGHGDTGRLGHGDTQKQIKPKVIEALKGQLIQKVSAANQFSIALTK 284

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G +++ G  +   LG  DT    TP+ I  L +V  ++ +  G  + LA+T  G VY +
Sbjct: 285 TGKLYSFGKGSGTGLGTPDT-SYSTPQLIQSLADV-IIIDVTTGDGHCLALTQRGDVYGW 342

Query: 295 GSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVAL----DSSGYVYTWG 349
           G+ S    G G  ++ + +P  ++     G+ V ++SAG  H +      +       W 
Sbjct: 343 GTNSMGQCGQGHNNNSISKPGKVEGL--DGVQVQQISAGTSHSIVWTAIPNDRCATAVWH 400

Query: 350 KGYC 353
             YC
Sbjct: 401 WPYC 404


>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
 gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 1 [Bos taurus]
          Length = 531

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  L P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 12/255 (4%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S N A +V  S +VF  G N S C G  D N     P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDSDEVFVFGLNYSSCLGTGD-NHSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAVLDNGEVYG 204

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 408 LGFPDRGVSDKVLRP 422
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ +   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 291
             G ++  G+NT+GQLG G+  +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVIEIAACHSAHTSAAKTQGGHV 307

Query: 292 YSFG 295
           Y +G
Sbjct: 308 YMWG 311


>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
          Length = 531

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  L P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 12/255 (4%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S N A +V  S +VF  G N S C G  D N     P+ +EAL G   K ++ G      
Sbjct: 30  SANEALYVTDSDEVFVFGLNYSSCLGTGD-NHSTLVPKKLEALCGKKIKSLSYGSGPHVL 88

Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A+  +G 
Sbjct: 89  LSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGE 148

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAVLDNGEVYG 204

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 408 LGFPDRGVSDKVLRP 422
           LG    G  + +L P
Sbjct: 265 LG---TGNKNNLLSP 276



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ +   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K   + +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           +++  G +H++ L ++  VF+ G + CG +G G    Q       N      VV ++  +
Sbjct: 131 VEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ 190

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT
Sbjct: 191 TSSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALT 249

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY--MLAVTGNGVV 291
             G ++  G+NT+GQLG G+  +  +P  I  + E   V++IAA  S     A T  G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGNKNNLLSPAHI--MVEKERVIEIAACHSAHTSAAKTQGGHV 307

Query: 292 YSFG 295
           Y +G
Sbjct: 308 YMWG 311


>gi|440901734|gb|ELR52623.1| Serine/threonine-protein kinase Nek9, partial [Bos grunniens mutus]
          Length = 888

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 129/275 (46%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 374 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 433

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 434 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFF 492

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 493 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 550

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSD-----KVLRP---RILDSLR 429
            V      TF+L  +G V   G   F  LG      G+ +     +V  P    +   L 
Sbjct: 551 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYPTSFTLAKQLS 610

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 611 FYKIRTIAPGKTHTAALDERGRLLTFGCNKCGQLG 645



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 381 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 440

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  LD   ++ V Q
Sbjct: 441 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGAEVLEPMQLDFFLSNPVEQ 499

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 500 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 543



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 34/304 (11%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSAAHVVQVSASE 173
           Q++ G   T+ +++   +++ GS   G +G       + +   +++F  +  V QVS  +
Sbjct: 445 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGD 504

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 505 NHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDG 558

Query: 229 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 276
           T  LT  G V  CG N   +LG          H    + P P S    +++    +  IA
Sbjct: 559 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYPTSFTLAKQLSFYKIRTIA 618

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G ++  A+   G + +FG      LG G     L    +      G  V+RVS GDE  
Sbjct: 619 PGKTHTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFT 677

Query: 337 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           +A     +++ WG G  G L        HG +I  + P P+     H+    C R   T 
Sbjct: 678 IAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWNTI 736

Query: 390 VLVD 393
           ++V+
Sbjct: 737 LIVE 740



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 345 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 400

Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 401 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 458

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 289
            G ++  GS+ +G +G    +D+    + + P++        V Q++ G ++++ +T N 
Sbjct: 459 EGQLYAFGSDYYGCMG----VDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNK 514

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 515 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 572

Query: 350 KGYCGALGHGD--------EIDKTLPEPLS-SLKSHLAV----QVCARKRKTFVLVDTGS 396
                 LG           E    +P P S +L   L+      +   K  T  L + G 
Sbjct: 573 LNEFNKLGLNQCMSGIINHEAYHEVPYPTSFTLAKQLSFYKIRTIAPGKTHTAALDERGR 632

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 633 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 689

Query: 456 GDNERAQLGHDTLRGCLEPTE 476
           G+    +L        + PTE
Sbjct: 690 GNGGNGRLA-------MTPTE 703



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 17/138 (12%)

Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTGSVYGFGWM 403
           VY WG G            K+ P+ L  +KS   A QVCA      V+     +Y +  M
Sbjct: 364 VYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNM 411

Query: 404 GFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERA 461
             G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+ FG +   
Sbjct: 412 QGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYG 471

Query: 462 QLGHDTLRGC--LEPTEI 477
            +G D + G   LEP ++
Sbjct: 472 CMGVDKVAGAEVLEPMQL 489


>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
          Length = 267

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 6/207 (2%)

Query: 260 PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQ 317
           P  I P    G + +I A  +Y +++   G V+S+GSG    LG+ E+  + Q  P+ I+
Sbjct: 48  PVQITPDYWQGKLEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGY-EKDVKYQKYPKIIE 106

Query: 318 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 377
           TF  + I V +++ G  H  A  + G +YTWG+G  G LGHG   ++ +P+ +   +   
Sbjct: 107 TFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQDIR 166

Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 437
            +++      T  ++    VYG+G+   G LGF D     +V  P+ +       V QI 
Sbjct: 167 VLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQDL---SRVNLPKKIMFFNQKEVVQIQ 223

Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLG 464
            G  H++ +T  G+++ +G NE  QLG
Sbjct: 224 CGKKHSIALTVEGQVYSWGSNEYGQLG 250



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 7/243 (2%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLV--EALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
           V+ C D+          N  I  P  +  +  +G   +++ A  N++  +  +G+V + G
Sbjct: 25  VWGCSDDWQLGIETGPKNYQISDPVQITPDYWQG-KLEKIYAQSNYSMSIDTKGNVFSWG 83

Query: 243 SNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           S   G+LG+  D   +  PK I        +V +IA G  +  A T  G +Y++G G N 
Sbjct: 84  SGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNG 143

Query: 301 CLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGD 360
            LGHG   +E  P+ ++ F+   I V+ ++ GD H +A+ S   VY WG    G LG  D
Sbjct: 144 QLGHGSNQNEEIPKKVKEFQD--IRVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQD 201

Query: 361 EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
                LP+ +        VQ+   K+ +  L   G VY +G   +G LG      S K+ 
Sbjct: 202 LSRVNLPKKIMFFNQKEVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLGIQLGKQSGKMT 261

Query: 421 RPR 423
            P 
Sbjct: 262 CPE 264



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 8/230 (3%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPS--AAHVVQVSASENHAAFVLQSGQVFTCG 189
           V+ C       +  GP+  Q     +I  P      + ++ A  N++  +   G VF+ G
Sbjct: 25  VWGCSDDWQLGIETGPKNYQISDPVQIT-PDYWQGKLEKIYAQSNYSMSIDTKGNVFSWG 83

Query: 190 DNSSFCCGHRDTNRPIFRPRLVE--ALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHG 247
                  G+    +    P+++E  +++ +   ++  G + +   T +G ++T G   +G
Sbjct: 84  SGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNG 143

Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
           QLGHG   +   PK +   +++  V++IA G S+ +A+    +VY +G      LG  + 
Sbjct: 144 QLGHGSNQNEEIPKKVKEFQDI-RVLEIACGDSHTMAIISGNLVYGWGFNQAGQLGFQDL 202

Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
                P+ I  F +K   VV++  G +H +AL   G VY+WG    G LG
Sbjct: 203 SRVNLPKKIMFFNQK--EVVQIQCGKKHSIALTVEGQVYSWGSNEYGQLG 250



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 28/259 (10%)

Query: 64  LCALHSIYAGMSRNVQIELLNR-----CNGNWKRVLRFLQSVEHSSDIVETS----AGNQ 114
           +  +++   G+  N Q E  N+     C+ +W+  +         SD V+ +     G  
Sbjct: 1   MAIINAPNNGLEDNAQQEYSNKLFVWGCSDDWQLGIETGPKNYQISDPVQITPDYWQGKL 60

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--------PETTQCVSFTRINFPSAAH 165
            +I     +++ I +  +VFS GS   G LG+         P+  +  S   I       
Sbjct: 61  EKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNI------I 114

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVPCKQVTA 224
           V +++   +H+A     G+++T G   +   GH  + N  I  P+ V+  + +   ++  
Sbjct: 115 VTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEI--PKKVKEFQDIRVLEIAC 172

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
           G + T  +     V+  G N  GQLG  D      PK I    +   VVQI  G  + +A
Sbjct: 173 GDSHTMAIISGNLVYGWGFNQAGQLGFQDLSRVNLPKKIMFFNQ-KEVVQIQCGKKHSIA 231

Query: 285 VTGNGVVYSFGSGSNFCLG 303
           +T  G VYS+GS     LG
Sbjct: 232 LTVEGQVYSWGSNEYGQLG 250



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 74/160 (46%), Gaps = 6/160 (3%)

Query: 328 RVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-KTLPEPLS--SLKSHLAVQVCAR 384
           ++ A   + +++D+ G V++WG G  G LG+  ++  +  P+ +   S+++ +  ++   
Sbjct: 62  KIYAQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKIALG 121

Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
              +    + G +Y +G    G LG    G +     P+ +   +   V +I+ G  HT+
Sbjct: 122 THHSAACTNQGKLYTWGQGVNGQLG---HGSNQNEEIPKKVKEFQDIRVLEIACGDSHTM 178

Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
            +     ++G+G N+  QLG   L     P +I     +E
Sbjct: 179 AIISGNLVYGWGFNQAGQLGFQDLSRVNLPKKIMFFNQKE 218


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 131/282 (46%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C    AG N   + TI   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGNAG-NEVLYTTINDEIFVLGTNCSGCLGLGDVQSTLEPR 66

Query: 262 SIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L +   + +   +GP  +LA T  G V+++G      LG+G  +  L P  + T  
Sbjct: 67  RLDSLSDKKIACLSYGSGPHIILATT-EGEVFTWGHNGYTQLGNGTTNHGLVPCQVST-N 124

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V+ V+ G  H + L S G VY WG    G +G G   ++ +P  ++  L++ + V
Sbjct: 125 LSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVV 184

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +VDTG VY +G+ G G LG    G      R   L  +R   V +++ G
Sbjct: 185 NIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVACG 241

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 242 FAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEK 283



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 126/294 (42%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           +AGN++  TT         N  +F  G++  G LG G +    +   R++  S   +  +
Sbjct: 29  NAGNEVLYTT--------INDEIFVLGTNCSGCLGLG-DVQSTLEPRRLDSLSDKKIACL 79

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N     G+  TN  +   ++   L      +V  G   
Sbjct: 80  SYGSGPHIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYH 139

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V+  G N  GQ+G G T ++  P+ +    +   VV IA G    +AV   
Sbjct: 140 SLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDT 199

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAW 257

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P+   K   + +  C     +      G VY +G
Sbjct: 258 GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 231
           N   +   + ++F  G N S C G  D  +    PR +++L  K + C    +G +    
Sbjct: 32  NEVLYTTINDEIFVLGTNCSGCLGLGDV-QSTLEPRRLDSLSDKKIACLSYGSGPHII-L 89

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  ++       V+++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEV 149

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y++G  ++  +G G   ++  PR +    +  + VV ++ G    VA+  +G VY WG  
Sbjct: 150 YAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKV-VVNIACGQMCSVAVVDTGEVYVWGYN 208

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 209 GNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLG 266


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 162/382 (42%), Gaps = 26/382 (6%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLL----ISNSSVFSCGSSLCG--VLGHGPETTQ 151
           +S   S+ + + S G  +    GR   LL      +  +FSCG +  G   LGH   T++
Sbjct: 433 RSKPSSTTVGDGSGGAAVSGQAGRTERLLSVASFDDCELFSCGQNNYGELCLGHCNSTSK 492

Query: 152 CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
                 + F SA  +  ++      A V++ G VFTCG N S  CG+      +     V
Sbjct: 493 ---LEHVPFFSAKAIRDIAGGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPV 549

Query: 212 EALKGVPCKQVTAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEE 268
            AL G+    V A       L +   G V++ G N  GQLG G T+ +  TP+ I  L E
Sbjct: 550 RALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLRE 609

Query: 269 VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR 328
              +   A    +   V+ NG +  FG      LG      +  P+ + +   + I    
Sbjct: 610 KYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVI--TE 667

Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA------VQVC 382
           V+ G  H +A+ S G VY++GK   G LG G   +  +P   + +K+ L       V V 
Sbjct: 668 VACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVP---TLVKTSLGESDEKIVAVS 724

Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
                T  + + G +  +G   +G LG    G  D     + +    +  +   S G YH
Sbjct: 725 CGYYHTVTISEKGKLITWGRNDYGQLGI---GSKDHKNSAQYVPLPLSSKIKTASCGCYH 781

Query: 443 TVVVTDRGRLFGFGDNERAQLG 464
           T+++   GR+  FG N + QLG
Sbjct: 782 TLILMSNGRVMVFGRNNKGQLG 803



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 11/254 (4%)

Query: 237 HVHTCGSNTHGQL--GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            + +CG N +G+L  GH ++  +       P     ++  IA G   +  V  +G V++ 
Sbjct: 470 ELFSCGQNNYGELCLGHCNSTSK---LEHVPFFSAKAIRDIAGGNEVLAVVMKDGAVFTC 526

Query: 295 GSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           G   +   G+G   +  +    ++      I++V  + G EH++A+ S G VY+WG    
Sbjct: 527 GLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDR 586

Query: 354 GALGHGDEIDKT-LPEPLSSLKSHLAVQVCA-RKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
           G LG G  I K+  P  + SL+    +   A     + V+   G +  FG    G LG  
Sbjct: 587 GQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLD 646

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
               +     P+++DSL +  +++++ GLYHT+ +T  G ++ FG N+  QLG    R  
Sbjct: 647 H---TQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNM 703

Query: 472 LEPTEIFIQEMEED 485
             PT +     E D
Sbjct: 704 KVPTLVKTSLGESD 717



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 116/291 (39%), Gaps = 41/291 (14%)

Query: 99  SVEHSSDIVETSAGNQMQITTG--RYH--TLLISNSSVFSCGSSLCGVLG-------HGP 147
           S  H+  +++ S   +  ITT    YH   ++ SN  +   G + CG LG       H P
Sbjct: 596 SKSHTPRMID-SLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTP 654

Query: 148 ETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPI 205
           +    +S        +  + +V+    H   +   G+V++ G N       GH    R +
Sbjct: 655 QLVDSLS--------SQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHA---RNM 703

Query: 206 FRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKS 262
             P LV+   G   +++ A   G   T  ++ +G + T G N +GQLG G + D      
Sbjct: 704 KVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG-SKDHKNSAQ 762

Query: 263 IAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTFR 320
             PL     +   + G  + L +  NG V  FG  +   LG G +       P  + +  
Sbjct: 763 YVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSRTLPSADLPLPVPSNS 822

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY-CGALGHGDEID--KTLPE 368
                VVR++AG         S Y+ T   G  CG  G  D+    K LPE
Sbjct: 823 LANDEVVRIAAG-------FYSSYILTGRSGEGCGLDGAPDDASQAKDLPE 866


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 132/277 (47%), Gaps = 13/277 (4%)

Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
           VF  GD      G   +   +F PRLV+ LK      + AG   T  +T  G ++  GSN
Sbjct: 4   VFGRGDMGQLGDG---STEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH 304
              QLG     D   P  +  LE+   V ++A GP++ LAV   G V +FGS     +G 
Sbjct: 61  EESQLGVRQRSDALAPTRVTALEQF-QVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119

Query: 305 GEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
           G     ++ PR ++  R   +H+VRV+AG  H +AL S+G V++ G G  GALG G    
Sbjct: 120 GPCGARVELPRVVKDLRS--MHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEG 177

Query: 364 KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP----DRGVSDKV 419
             +P P+S L     VQ+   +  +  +   G V  +G  G   L  P      G  +  
Sbjct: 178 NDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWG-RGKHRL-LPAFHCGHGDFENC 235

Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
             P+ + +L+     Q+S G  HTV++T+ G ++ +G
Sbjct: 236 STPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 10/242 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV ++A   H A V   G+++  G N     G R  +  +  P  V AL+    ++V  G
Sbjct: 35  VVNLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRSDAL-APTRVTALEQFQVQRVACG 93

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLA 284
              T  +   G V   GS  +GQ+G G    R   P+ +  L  +  +V++AAG S+ LA
Sbjct: 94  PAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKDLRSM-HIVRVAAGGSHTLA 152

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           ++  G V+S G+GS   LG G       PR I      G  VV+++ G+ H  A+ + G 
Sbjct: 153 LSSTGGVFSCGNGSFGALGRGTTEGNDVPRPISRLWPLG--VVQIACGENHSAAITADGR 210

Query: 345 VYTWGKGYCGAL-----GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
           V TWG+G    L     GHGD  + + P+P+ +LK  +  QV      T +L + GSVY 
Sbjct: 211 VLTWGRGKHRLLPAFHCGHGDFENCSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYA 270

Query: 400 FG 401
           +G
Sbjct: 271 WG 272



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 4/187 (2%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+ FG G    LG G   D   PR ++  + +   VV ++AG  H  A+ S G +Y  G 
Sbjct: 2   VWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSR--DVVNLAAGALHTAAVTSDGELYVMGS 59

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
                LG     D   P  +++L+     +V      T  +VD G+V  FG   +G +G 
Sbjct: 60  NEESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGL 119

Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
              G   +V  PR++  LR+ H+ +++ G  HT+ ++  G +F  G+     LG  T  G
Sbjct: 120 GPCGA--RVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEG 177

Query: 471 CLEPTEI 477
              P  I
Sbjct: 178 NDVPRPI 184



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 12/188 (6%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G  HTL ++   +V + GS+  G +G GP   +      +    + H+V+V+A  +
Sbjct: 89  RVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGS 148

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H   +  +G VF+CG N SF    R T      PR +  L  +   Q+  G N +  +T 
Sbjct: 149 HTLALSSTGGVFSCG-NGSFGALGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITA 207

Query: 235 RGHVHTCGSNTHGQL-----GHGDTLDRPTPKSIAPLEEVGSVV--QIAAGPSYMLAVTG 287
            G V T G   H  L     GHGD  +  TPK   P++ +  +V  Q++ G  + + +T 
Sbjct: 208 DGRVLTWGRGKHRLLPAFHCGHGDFENCSTPK---PVQALKGIVGRQVSCGDDHTVLLTE 264

Query: 288 NGVVYSFG 295
           +G VY++G
Sbjct: 265 DGSVYAWG 272


>gi|402876741|ref|XP_003902114.1| PREDICTED: serine/threonine-protein kinase Nek9 [Papio anubis]
          Length = 979

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HVV L  +  VY+WG G  G LG   E D  +P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDVPKALIIV 535

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 429
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYIPQKVDVPKALIIVAVQCG 540

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 273
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 334 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 387 KTFVLVD 393
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYIPQKVDV 528



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 154/381 (40%), Gaps = 47/381 (12%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
              +++T      G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 289
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYIPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 350 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 396
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 456 GDNERAQLGHDTLRGCLEPTE 476
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 394
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 447

Query: 453 FGFGDNERAQLGHDTLRG--CLEPTEI 477
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 416

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 15/300 (5%)

Query: 169 VSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
           +S  + H A V  + +++  G N+      G + T   + +P  V+ALK    K    G 
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST---VSKPTCVKALKPEKVKFAACGR 96

Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
           N T   T  G V+  G N  GQLG GDT +R T   I+       + Q++AG +   A+T
Sbjct: 97  NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156

Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
            +G ++ +G  S   +G     +   P+ +      G  +  +S G  H   + + G +Y
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLY 212

Query: 347 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           T+G+  CG LG  ++  ++  +P+P+  +   + VQV      T VL +  +VY FG   
Sbjct: 213 TFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV-VQVACGGGHTVVLTEK-AVYTFGLGQ 270

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           FG LG         V  P+ ++ ++   +S I+ G  HT ++TD G ++ FGD    +LG
Sbjct: 271 FGQLGLGTFLFETSV--PKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 119/249 (47%), Gaps = 18/249 (7%)

Query: 120 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASENHAA 177
           GR HTL+ +    V++ G +  G LG G +T +  +F  I+F  S   + Q+SA  N +A
Sbjct: 95  GRNHTLVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSA 153

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
            + + G++F  GDNS    G  +    +  P+ V    G P   ++ G   + F+T  G 
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTN-VCVPQQVTV--GKPISWISCGYYHSAFVTTEGQ 210

Query: 238 VHTCGSNTHGQLGHGDTL----DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
           ++T G    G+LG  + L      P P    P    G VVQ+A G  + + +T    VY+
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIP----GKVVQVACGGGHTVVLT-EKAVYT 265

Query: 294 FGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           FG G    LG G    E   P+AI+  + + I  +  + G+ H   +   G +YT+G G 
Sbjct: 266 FGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFI--ACGENHTALITDMGLMYTFGDGR 323

Query: 353 CGALGHGDE 361
            G LG G E
Sbjct: 324 HGKLGLGLE 332



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 6/185 (3%)

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           GSG+ F  G  +  + +  +    F  +      +S GDEH   +  +  +Y +G    G
Sbjct: 10  GSGAVFTFGKTQFAENIPSK----FWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWG 65

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
            LG G +   + P  + +LK          +  T V  + G VY  G    G LG  D  
Sbjct: 66  QLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTE 125

Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
                       S R   + Q+S G   +  +T+ G LF +GDN   Q+G + +     P
Sbjct: 126 ERSTFHLISFFTSQR--KIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVP 183

Query: 475 TEIFI 479
            ++ +
Sbjct: 184 QQVTV 188



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 11/168 (6%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCK--QV 222
           +  +S    H+AFV   GQ++T G+     CG     N+ +   R+ + + G+P K  QV
Sbjct: 192 ISWISCGYYHSAFVTTEGQLYTFGEPE---CGKLGLPNQLLVNHRMPQPVPGIPGKVVQV 248

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSY 281
             G   T  LT +  V+T G    GQLG G  L +   PK+I  +++   +  IA G ++
Sbjct: 249 ACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQ-KISFIACGENH 306

Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTFRRKGIHVV 327
              +T  G++Y+FG G +  LG G ++  ++  P     F R  + +V
Sbjct: 307 TALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLV 354


>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Takifugu rubripes]
          Length = 726

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 152/332 (45%), Gaps = 26/332 (7%)

Query: 147 PETTQCVSFTRINF----PSAAHV-----VQVSASENHAAFVLQSGQVFTCGDNSSFCCG 197
           PET    +F +  F    PS   +     ++++  + H A + ++G++F  G N+    G
Sbjct: 10  PETGAVFTFGKSKFADNIPSKFWLKNDVPLKIACGDEHTALITKNGRLFMFGSNNWGQLG 69

Query: 198 HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR 257
              + R + +P  V+ALK      V  G N T   T +G V + G N+ GQLG GD  +R
Sbjct: 70  -LGSKRTVNKPTCVKALKTEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEER 128

Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
            T + I   + +G V  +AAG +   A+T +G ++ +G  +   +G  ++     P+ + 
Sbjct: 129 TTFQRIHAFDSLGPVKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEVD 188

Query: 318 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE--IDKTLPEPLSSLKS 375
                G  +  VS G  H   + + G +YT+G+   G LG   E      +P+ + S+K 
Sbjct: 189 V----GGPISWVSCGYYHSAFVTADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKE 244

Query: 376 HLAVQVCARKRKTFVLVDTGSVYG---FGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
            +    C       +  +    +G   FG +G G+  F  R        PR ++  +   
Sbjct: 245 PVTQVACGGGHTVALTEERLFTFGLGQFGQLGHGTFIFESR-------LPRPVEHFKKGR 297

Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           V Q++ G  HT V+TD G L+ FGD    +LG
Sbjct: 298 VCQVACGENHTAVITDGGLLYTFGDGRHGKLG 329



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 153/342 (44%), Gaps = 25/342 (7%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETT----QCVSFTRINFPSAAHVVQV 169
           ++I  G  HT LI+ N  +F  GS+  G LG G + T     CV   +        V+ V
Sbjct: 39  LKIACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTE-----KVLLV 93

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGV-PCKQVTAGLN 227
           +   NH       G+VF+ G NS    G  D   R  F+   + A   + P K + AG N
Sbjct: 94  ACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQ--RIHAFDSLGPVKMLAAGSN 151

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  LT  G +   G NT GQ+G       P+P+ +   +  G +  ++ G  +   VT 
Sbjct: 152 TSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEV---DVGGPISWVSCGYYHSAFVTA 208

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           +G +Y+FG   +  LG   +       P+ +++ +     V +V+ G  H VAL +   +
Sbjct: 209 DGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEP---VTQVACGGGHTVAL-TEERL 264

Query: 346 YTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
           +T+G G  G LGHG  I +  LP P+   K     QV   +  T V+ D G +Y FG   
Sbjct: 265 FTFGLGQFGQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTFGDGR 324

Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
            G LG  +   +++  +P +      + V   + G  H VV+
Sbjct: 325 HGKLGLGEENFTNQ-FKPTVCSRFLKYGVQAATCGGCHMVVL 365



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 18/257 (7%)

Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQ 274
           VP K +  G   T  +T  G +   GSN  GQLG G   T+++PT       E+V   + 
Sbjct: 37  VPLK-IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKV---LL 92

Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
           +A G ++ L  T  G V+S G  S   LG G+  +    + I  F   G  V  ++AG  
Sbjct: 93  VACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGP-VKMLAAGSN 151

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
              AL  SG ++ WG    G +G   E     P+ +  +   ++   C      FV  D 
Sbjct: 152 TSAALTESGKLFMWGDNTEGQIGLAKESHAPSPQEVD-VGGPISWVSCGYYHSAFVTAD- 209

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLR---PRILDSLRAHHVSQISTGLYHTVVVTDRGR 451
           G++Y FG    G LG      ++++ R   P+++ S++   V+Q++ G  HTV +T+  R
Sbjct: 210 GALYTFGECDSGKLGL----TTEQLPRHRVPQMVKSIK-EPVTQVACGGGHTVALTEE-R 263

Query: 452 LFGFGDNERAQLGHDTL 468
           LF FG  +  QLGH T 
Sbjct: 264 LFTFGLGQFGQLGHGTF 280


>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
           caballus]
          Length = 531

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
          Length = 531

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|344246690|gb|EGW02794.1| Serine/threonine-protein kinase Nek9 [Cricetulus griseus]
          Length = 700

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 127/275 (46%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 182 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 241

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 242 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFF 300

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HVVAL  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 301 LSNPVE--QVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 358

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 429
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 359 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 418

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 419 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 453



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 34/304 (11%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 173
           Q++ G   T+ +++   +++ GS   G +G    + ++ +   ++NF  +  V QVS  +
Sbjct: 253 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFFLSNPVEQVSCGD 312

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 313 NHVVALTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDG 366

Query: 229 TGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVVQIA 276
           T  LT  G V  CG N   +LG          H    + P   S    +++    +  IA
Sbjct: 367 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 426

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
            G ++  A+   G + +FG      LG G     L    +      G  V+RVS GDE  
Sbjct: 427 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGDEFT 485

Query: 337 VALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           +A     +++ WG G  G L        HG +I  + P P+     H+    C R   T 
Sbjct: 486 IAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWHTI 544

Query: 390 VLVD 393
           ++V+
Sbjct: 545 LIVE 548



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 189 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 248

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 249 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGSEVLEPMQLNFFLSNPVEQ 307

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H V +T    ++ +G  E  +LG D+      P  + +
Sbjct: 308 VSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 351



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 22/332 (6%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 222 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 280

Query: 196 CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
            G  + +   +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 281 MGVDKVSGSEVLEPMQLNFFLSNPVEQVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSE 340

Query: 255 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 305
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 341 EDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 400

Query: 306 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 401 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 460

Query: 365 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 417
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 461 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 520

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 521 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 549



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 153 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 208

Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
              +++T      G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T 
Sbjct: 209 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 266

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 289
            G ++  GS+ +G +G    +D+ +  + + P++        V Q++ G ++++A+T N 
Sbjct: 267 EGQLYAFGSDYYGCMG----VDKVSGSEVLEPMQLNFFLSNPVEQVSCGDNHVVALTRNK 322

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 323 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 380

Query: 350 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 396
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 381 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 440

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 441 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 497

Query: 456 GDNERAQLGHDTLRGCLEPTE 476
           G+    +L        + PTE
Sbjct: 498 GNGGNGRLA-------MTPTE 511



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 395
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 164 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 211

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+
Sbjct: 212 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLY 271

Query: 454 GFGDNERAQLGHDTLRG--CLEPTEI 477
            FG +    +G D + G   LEP ++
Sbjct: 272 AFGSDYYGCMGVDKVSGSEVLEPMQL 297


>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
 gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
          Length = 646

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 143/308 (46%), Gaps = 34/308 (11%)

Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLV---EALKGVPCKQVTAGLNFTGFLTIRGH-V 238
           G V+  G N    CG + TN+ I  P  +        +  KQ+  G + +  +  + + V
Sbjct: 97  GLVYAWGYNYFGQCGDK-TNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGV 155

Query: 239 HTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV------QIAAGPSYMLAVTGNGVVY 292
           ++ G N  GQLGHGD L+R  P  ++ +              +A G  + + V+  G +Y
Sbjct: 156 YSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGELY 215

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           +FG G+   LGHG++  + +P  + +   K I  V V+AG  H   +DS+G +Y+WG   
Sbjct: 216 TFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSI--VSVAAGVMHSSCVDSNGKIYSWGWNR 273

Query: 353 CGALGHGDEIDKTLPEP-------LSSLKS-----HLA----VQVCARKRKTFVLVDTGS 396
            G LG+G    +TLP P       LS ++      HL     ++V   K  T  L  +G 
Sbjct: 274 YGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGE 333

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
           V GFG+   G LG    G     L P  ++     HV  I++G YH++ +TD G  + +G
Sbjct: 334 VVGFGFNACGQLG---NGNHMDQLYPVKIE--FNEHVIDIASGYYHSLCLTDNGEAYSWG 388

Query: 457 DNERAQLG 464
                 LG
Sbjct: 389 YMSDGSLG 396



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 119/269 (44%), Gaps = 25/269 (9%)

Query: 236 GHVHTCGSNTHGQLGH--GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV-VY 292
           G V+  G N  GQ G     T+  PT      ++    + QIA G S+ LA+      VY
Sbjct: 97  GLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVY 156

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR-----VSAGDEHVVALDSSGYVYT 347
           S+G      LGHG+Q +  QP  +                 V+ G +H + + + G +YT
Sbjct: 157 SWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGELYT 216

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           +G G  G LGHGDE  K  P P+SSL     V V A    +  +   G +Y +GW  +G 
Sbjct: 217 FGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQ 276

Query: 408 LGFPDRGVSDKVL-------RPRILD---SLRAHHVSQIS-----TGLYHTVVVTDRGRL 452
           LG  +  V  + L        P++ D     + HH+ +++      G  HT+ ++  G +
Sbjct: 277 LG--NGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEV 334

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
            GFG N   QLG+      L P +I   E
Sbjct: 335 VGFGFNACGQLGNGNHMDQLYPVKIEFNE 363



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 187/431 (43%), Gaps = 64/431 (14%)

Query: 98  QSVEHSSDIVETSAGNQM---QITTGRYHTLLISNS--SVFSCGSSLCGVLGHGPE---- 148
           Q+++  + I+  +  N++   QI  G  H+L I+     V+S G +  G LGHG +    
Sbjct: 116 QTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVYSWGVNRWGQLGHGDQLNRN 175

Query: 149 --TTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 206
             T      +     ++     V+    H+  V   G+++T G  ++   GH D  +P F
Sbjct: 176 QPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGELYTFGCGTTGRLGHGD-EQPKF 234

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR--PTPKSI- 263
           +P  V +L G     V AG+  +  +   G +++ G N +GQLG+G    +  PTP    
Sbjct: 235 KPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQLGNGSVKSQTLPTPPKFQ 294

Query: 264 -APLEEVG-----------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 311
              L ++            + +++  G ++ LA++ +G V  FG  +   LG+G   D+L
Sbjct: 295 NPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQL 354

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS 371
            P  I+ F     HV+ +++G  H + L  +G  Y+WG    G+LG G+           
Sbjct: 355 YPVKIE-FNE---HVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGE----------- 399

Query: 372 SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL-GFPDRGVSDKVLRPRILDSLRA 430
                  V     K K   LV     +      F  + G  D   + + +    L   + 
Sbjct: 400 -------VYTHQTKPKLIPLVHIRHCFTDSNDAFNEIYGRQDENTTQETIDQHKLYLSKK 452

Query: 431 HH----VSQISTGLYHTVVVTDRGRL--FGFGDNER----AQLGHDTLRGCLEPTEIFIQ 480
           +     V  IS G +++ ++T  G+L  FGFGD  R    ++   D +   +EPT+  ++
Sbjct: 453 YSVGDTVDMISAGAWNSAIITSSGKLFCFGFGDTYRNGNQSEFDQD-MPIIVEPTKWGLE 511

Query: 481 ---EMEEDTGL 488
               ++EDT +
Sbjct: 512 RPFNIKEDTDI 522


>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Otolemur garnettii]
          Length = 531

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
           [Papio anubis]
          Length = 355

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHS--VCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
          Length = 534

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 43  YVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSL-SYGSGPHVLLS-TED 100

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H VAL + G V+ 
Sbjct: 101 GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSVALAADGEVFA 158

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 159 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 218

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG    G +   L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 219 QLGL---GNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 275

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 276 NKNNLLSPAHIMVEK 290



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 93  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAA 152

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 153 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 212

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 213 GYNGNGQLGLGNNVNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 270

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 271 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 318


>gi|310824879|ref|YP_003957237.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
 gi|309397951|gb|ADO75410.1| Regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
          Length = 775

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 156/355 (43%), Gaps = 26/355 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           M +   + H+L + S+++V++ G +  G LG G    + V    +  P  + VV V+A  
Sbjct: 425 MAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVP---VPVPKLSSVVAVAAGR 481

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVPCKQVTAGLNFTG 230
            H+  V   G V+  GDN     G   +T+R  P+  P L   +       V AG N + 
Sbjct: 482 YHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGVA------VAAGENHSL 535

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            L   G V   G N +GQLG+G T D P P  +  L      V +AAG  Y LAV  +G 
Sbjct: 536 VLRSDGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLS---GGVAVAAGQYYSLAVRSDGT 592

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+++G      LG G   D   P  +Q     G   V V+AG  H + + S G V+ WG 
Sbjct: 593 VWAWGLNFEGQLGDGTASDSPVPVRVQVPGLSGG--VAVAAGTSHALVVRSDGTVWAWGS 650

Query: 351 GYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            Y G +G G    + L P  +  L   +AV   A    +  +   GSV+ +G    G LG
Sbjct: 651 NYDGQVGEGAPRRRVLMPVQVQGLSEGMAV--AAGYNHSLAVRSDGSVWAWGGNTAGVLG 708

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G +D+   P     L       ++ G  H++V+   G  +  G N   Q+G
Sbjct: 709 ---DGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQIG 758



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 27/368 (7%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L L S+ +V++ GS+  G LG G   T  VS   +       VV V+A E
Sbjct: 173 VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDG---TTNVSLVPVRVKKLTGVVAVAAGE 229

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  V   G V+T G N     G   T +R +  P  V+ L G     V  G+  +  +
Sbjct: 230 KHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKV--PVQVQGLSG--GVAVAGGVYHSLAV 285

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGV 290
              G V   G+N  GQLG G     P  + + P++  G   V  +AAG S  LAV  +G 
Sbjct: 286 RSDGTVWGWGANGVGQLGDGT----PMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGT 341

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 349
           V+++G  S   LG    +D ++  +    +  G+   V V A   H +A+ S G V+ WG
Sbjct: 342 VWAWGGNSYGALG----NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWG 397

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             + G LG G   ++ +  P+  L   +A  V AR+  +  +    +V+ +G    G LG
Sbjct: 398 GNHYGQLGDGTTSERLVAVPVQGLSGVMA--VAARQEHSLAVRSDATVWAWGRNYEGQLG 455

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
               G + +   P  +  L +  V  ++ G YH++ V   G ++ +GDNE  Q+G  T  
Sbjct: 456 ---DGTTRRREVPVPVPKLSS--VVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTET 510

Query: 470 GCLEPTEI 477
               P  +
Sbjct: 511 SRKAPVRV 518



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 181/401 (45%), Gaps = 30/401 (7%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT 150
           +RVL  +Q+ +  S +   +AG+ + +   R+      + +V++ G +  G LG+  +T 
Sbjct: 309 RRVLVPVQA-QGLSGVEAVAAGHSLSLAV-RF------DGTVWAWGGNSYGALGN--DTI 358

Query: 151 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPR 209
           + +S   +  P  +  V V A+ +HA  V   G V+  G N     G   T+ R +  P 
Sbjct: 359 ETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTSERLVAVP- 417

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V+ L GV    V A    +  +     V   G N  GQLG G T  R  P    P+ ++
Sbjct: 418 -VQGLSGV--MAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVP---VPVPKL 471

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
            SVV +AAG  + LAV  +G V+++G      +G G +     P  +          V V
Sbjct: 472 SSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGG----VAV 527

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           +AG+ H + L S G V+ WG  + G LG+G   D  +P  +  L   +A  V A +  + 
Sbjct: 528 AAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLSGGVA--VAAGQYYSL 585

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            +   G+V+ +G    G LG  D   SD  +  R+     +  V+ ++ G  H +VV   
Sbjct: 586 AVRSDGTVWAWGLNFEGQLG--DGTASDSPVPVRVQVPGLSGGVA-VAAGTSHALVVRSD 642

Query: 450 GRLFGFGDNERAQLGHDT-LRGCLEPTEIFIQEMEEDTGLA 489
           G ++ +G N   Q+G     R  L P +  +Q + E   +A
Sbjct: 643 GTVWAWGSNYDGQVGEGAPRRRVLMPVQ--VQGLSEGMAVA 681



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 19/311 (6%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  GRYH+L +  + +V++ G +  G +G G ET++      +  P+    V V+A E
Sbjct: 475 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAP---VRVPNLGGGVAVAAGE 531

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           NH+  +   G V+  G N     G+  T + P+  P  V+ L G     V AG  ++  +
Sbjct: 532 NHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV--PVQVQGLSG--GVAVAAGQYYSLAV 587

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   G N  GQLG G   D P P  +  +  +   V +AAG S+ L V  +G V+
Sbjct: 588 RSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQ-VPGLSGGVAVAAGTSHALVVRSDGTVW 646

Query: 293 SFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           ++GS  +  +G G      L P  +Q         + V+AG  H +A+ S G V+ WG  
Sbjct: 647 AWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG----MAVAAGYNHSLAVRSDGSVWAWGGN 702

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G    +T+P     L    A  V A +  + VL   G+ +  G    G +G  
Sbjct: 703 TAGVLGDGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQIG-- 758

Query: 412 DRGVSDKVLRP 422
           D G + +V  P
Sbjct: 759 DGGPTQQVSTP 769



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 163/366 (44%), Gaps = 23/366 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L + S+ +V++ G +  G LG G  +++ V    +     +  V V+   
Sbjct: 223 VAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKVP---VQVQGLSGGVAVAGGV 279

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  V   G V+  G N     G     R +  P   + L GV  + V AG + +  + 
Sbjct: 280 YHSLAVRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGV--EAVAAGHSLSLAVR 337

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVV 291
             G V   G N++G LG+ DT++     S  P++  G    V + A  S+ LAV  +G V
Sbjct: 338 FDGTVWAWGGNSYGALGN-DTIET---MSTVPVQVPGLSGGVTVVAASSHALAVRSDGTV 393

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G      LG G   + L    +Q        V+ V+A  EH +A+ S   V+ WG+ 
Sbjct: 394 WAWGGNHYGQLGDGTTSERLVAVPVQGLS----GVMAVAARQEHSLAVRSDATVWAWGRN 449

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
           Y G LG G    + +P P+  L S +A  V A +  +  +   G+V+ +G   +G +G  
Sbjct: 450 YEGQLGDGTTRRREVPVPVPKLSSVVA--VAAGRYHSLAVRFDGTVWAWGDNEYGQVG-- 505

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
             G       P  + +L       ++ G  H++V+   G ++ +G N   QLG+      
Sbjct: 506 -DGTETSRKAPVRVPNLGGG--VAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDS 562

Query: 472 LEPTEI 477
             P ++
Sbjct: 563 PVPVQV 568



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 159/382 (41%), Gaps = 31/382 (8%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQV 169
           + +  G YH+L + S+ +V+  G++  G LG G          R+  P  A     V  V
Sbjct: 273 VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDG------TPMRRVLVPVQAQGLSGVEAV 326

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           +A  + +  V   G V+  G NS    G+         P  V  L G     VT     +
Sbjct: 327 AAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSG----GVTVVAASS 382

Query: 230 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
             L +R  G V   G N +GQLG G T +R       P++ +  V+ +AA   + LAV  
Sbjct: 383 HALAVRSDGTVWAWGGNHYGQLGDGTTSERLV---AVPVQGLSGVMAVAARQEHSLAVRS 439

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           +  V+++G      LG G       P  +         VV V+AG  H +A+   G V+ 
Sbjct: 440 DATVWAWGRNYEGQLGDGTTRRREVPVPVPKLS----SVVAVAAGRYHSLAVRFDGTVWA 495

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    G +G G E  +  P  + +L   +AV   A +  + VL   G+V+ +G   +G 
Sbjct: 496 WGDNEYGQVGDGTETSRKAPVRVPNLGGGVAV--AAGENHSLVLRSDGTVWAWGGNHYGQ 553

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG    G++     P  +  L       ++ G Y+++ V   G ++ +G N   QLG  T
Sbjct: 554 LG---NGITSDSPVPVQVQGLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGT 608

Query: 468 LRGCLEPTEIFIQEMEEDTGLA 489
                 P  + +  +     +A
Sbjct: 609 ASDSPVPVRVQVPGLSGGVAVA 630



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 135/304 (44%), Gaps = 23/304 (7%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           +++   NH+  V   G V+  G+N     G   T+     P  V+ L GV    V  G  
Sbjct: 75  RIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRV-PVQVQGLSGVVA--VAVGAY 131

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  L   G V   G     Q G G   D   P   AP+  +   V +AAG  + LA+  
Sbjct: 132 HSLALRSDGTVWAVGRAAC-QGGDGTASDCTVP---APVPGLSGGVAVAAGGLHSLALRS 187

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           +G V+++GS     LG G  +  L P  ++        VV V+AG++H +A+ S G V+T
Sbjct: 188 DGTVWAWGSNFEGQLGDGTTNVSLVPVRVKKL----TGVVAVAAGEKHSLAVRSDGTVWT 243

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    GALG G    + +P  +  L   +A  V      +  +   G+V+G+G  G G 
Sbjct: 244 WGFNGYGALGDGTTSSRKVPVQVQGLSGGVA--VAGGVYHSLAVRSDGTVWGWGANGVGQ 301

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVS---QISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           LG       D     R+L  ++A  +S    ++ G   ++ V   G ++ +G N    LG
Sbjct: 302 LG-------DGTPMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALG 354

Query: 465 HDTL 468
           +DT+
Sbjct: 355 NDTI 358


>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
 gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
           laterosporus GI-9]
          Length = 392

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 15/349 (4%)

Query: 130 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
           S ++  GS   G  G G  + +  + + +     + V+ V    +H   + + G V+T G
Sbjct: 51  SVIYGTGSDANG--GLGSSSVKGKTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWG 108

Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQL 249
            ++    G+         P  V+ L  V  KQV AG NFT  L   G V   G N  GQL
Sbjct: 109 WSAYGELGNEKAKSTEKTPHHVKWLSDV--KQVRAGENFTLALKEDGTVWAFGKNRSGQL 166

Query: 250 GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHD 309
           G G T  R  P  ++ L +   +V I AG  + LA++ +G V+++G+ S   LG+G +  
Sbjct: 167 GDGTTETRVKPVQVSGLTD---IVAIDAGEEFSLALSEDGTVWAWGNNSVGQLGNGTREK 223

Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
            LQP  +         V+ +S G++   A+ S+G VY WG    G LG G +     P  
Sbjct: 224 ALQPVQVSEL----TDVIAISTGEKQGYAVTSNGDVYGWGYN-QGKLGDGTKKSSNSPVL 278

Query: 370 LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLR 429
           +  +   +AV   + K+ T  L + G+V+ +G    G LG+              L+S  
Sbjct: 279 IDGIYDVIAVD--SGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTE 336

Query: 430 A-HHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             + +  I  G +H+  +   G ++ +G N   +LG    +  + P +I
Sbjct: 337 PLNQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKI 385



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 17/220 (7%)

Query: 104 SDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 163
           +DIV   AG +  +        L  + +V++ G++  G LG+G   T+  +   +     
Sbjct: 184 TDIVAIDAGEEFSLA-------LSEDGTVWAWGNNSVGQLGNG---TREKALQPVQVSEL 233

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
             V+ +S  E     V  +G V+  G N         T +    P L++ +  V    V 
Sbjct: 234 TDVIAISTGEKQGYAVTSNGDVYGWGYNQGKLG--DGTKKSSNSPVLIDGIYDVIA--VD 289

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSI--APLEEVGSVVQIAAGPS 280
           +G   T  L   G V   G+NTHGQLG+G  ++   TP  +     E +  +V I AG  
Sbjct: 290 SGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLNQIVAIDAGGF 349

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
           +  A+  +G V+S+G  SN  LG G    ++ P  I+T  
Sbjct: 350 HSHAIKKDGTVWSWGFNSNGELGLGHSKKQMYPAKIETIN 389


>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 748

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 176/384 (45%), Gaps = 38/384 (9%)

Query: 104 SDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 163
           + +   +AG+Q       Y   L ++ +V++ G +  G LG G  T++ +   R++  S 
Sbjct: 100 TQVTSVAAGDQ-------YSLALDADGAVWAWGDNASGQLGDGTLTSRLLP-QRVSALS- 150

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
            +VV +++   H   +   G V+  GDN +   G     R    P  V  L GV    V 
Sbjct: 151 -NVVSLASGFAHVLALRADGTVWAWGDNRNNQLGDGTLTRSSV-PLQVPGLSGVVA--VV 206

Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML 283
           AG + +  L   G +   G N +GQLG G T+ R TP  +A L+ V   V ++ G  + L
Sbjct: 207 AGGSSSLALRADGTLWAWGDNRYGQLGDGTTVRRITPVQVASLDSV---VSVSVGAYHAL 263

Query: 284 AVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSG 343
           A+  +G V+++G  +   LG G      QP ++         V  + AG+ H +A+ + G
Sbjct: 264 ALRADGTVWAWGHNAYGQLGDGTNTQRTQPVSVSL-----TDVRTLVAGNYHSLAVRTDG 318

Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL--AVQVCARKRKTFVLVDTGSVYGFG 401
            V+ WG      LG G+     LP     L++ +   V + A  R +  L   G+ + +G
Sbjct: 319 AVWAWGDNRYRQLGTGNLTSSPLP-----LQAGMTGGVTLVAGYRHSVALGADGTAWSWG 373

Query: 402 WMGFGSLGFPDRGVSDKVLRPRILD---SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
              FG LG       D    PR+     S  A   +  ++G  HTV++   GRL+ +GDN
Sbjct: 374 DNVFGQLG-------DTTFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDN 426

Query: 459 ERAQLGHDTLRGCLEPTEIFIQEM 482
           ++ QLG+ T +    P  + + ++
Sbjct: 427 QQGQLGNGTQQDSSLPLPVNLTDV 450



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 162/359 (45%), Gaps = 30/359 (8%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA-HVVQVSASENHAAFV 179
           R+   L ++ + +S G ++ G LG   +TT       +     A      ++ + H   +
Sbjct: 358 RHSVALGADGTAWSWGDNVFGQLG---DTTFEPRMAPVQVSGLALGRADATSGQLHTVML 414

Query: 180 LQSGQVFTCGDNSSFCCGH---RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
             +G+++  GDN     G+   +D++ P+    L + +       V +G   T  L   G
Sbjct: 415 GANGRLWAWGDNQQGQLGNGTQQDSSLPL-PVNLTDVIS------VASGYRHTAALRSDG 467

Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
            V T G N  GQLG G   DRPTP  +  L   G V  IA G ++ LA+  NG V+++G 
Sbjct: 468 TVWTWGMNRFGQLGEGTVTDRPTPVQVVGL---GGVTAIATGDNHSLALRSNGTVWAWGF 524

Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
                LG G   D  QP      +  G+ ++V ++AG  H +AL S G V+ +G  + G 
Sbjct: 525 NRYGQLGDGTAVDRRQP-----VQASGLSNIVAIAAGGSHSLALRSDGTVWAFGYNFDGQ 579

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LG+G      +P     L S   V + A    +  L   G+V+ +G+   G LG    G 
Sbjct: 580 LGNGTRTWTLVPVQAVGLSS--VVSLAAGSLYSLALRADGTVWAWGYNASGQLGV---GT 634

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
           +    +P  +  L    ++ I+ G YH++ +   G ++ +G N   QLG+ T    L P
Sbjct: 635 TQGSAQPLQVPGLSG--ITSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSP 691



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 159/365 (43%), Gaps = 28/365 (7%)

Query: 117 ITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHV---VQVSAS 172
           +  G YH+L + ++ +V++ G +    LG G       + T    P  A +   V + A 
Sbjct: 304 LVAGNYHSLAVRTDGAVWAWGDNRYRQLGTG-------NLTSSPLPLQAGMTGGVTLVAG 356

Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
             H+  +   G  ++ GDN     G   T  P   P  V  L  +     T+G   T  L
Sbjct: 357 YRHSVALGADGTAWSWGDNVFGQLGDT-TFEPRMAPVQVSGLA-LGRADATSGQLHTVML 414

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G +   G N  GQLG+G   D   P  +     +  V+ +A+G  +  A+  +G V+
Sbjct: 415 GANGRLWAWGDNQQGQLGNGTQQDSSLPLPV----NLTDVISVASGYRHTAALRSDGTVW 470

Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
           ++G      LG G   D  +P  +Q     G  V  ++ GD H +AL S+G V+ WG   
Sbjct: 471 TWGMNRFGQLGEGTVTD--RPTPVQVVGLGG--VTAIATGDNHSLALRSNGTVWAWGFNR 526

Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            G LG G  +D+  P   S L + +A  + A    +  L   G+V+ FG+   G LG   
Sbjct: 527 YGQLGDGTAVDRRQPVQASGLSNIVA--IAAGGSHSLALRSDGTVWAFGYNFDGQLG--- 581

Query: 413 RGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
            G     L P  + ++    V  ++ G  +++ +   G ++ +G N   QLG  T +G  
Sbjct: 582 NGTRTWTLVP--VQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQGSA 639

Query: 473 EPTEI 477
           +P ++
Sbjct: 640 QPLQV 644



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 148/344 (43%), Gaps = 63/344 (18%)

Query: 118 TTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHA 176
           T+G+ HT+++ +N  +++ G +  G LG+G +    +    +N      V+ V++   H 
Sbjct: 405 TSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLP-VNL---TDVISVASGYRHT 460

Query: 177 AFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
           A +   G V+T G N     G    T+RP   P  V  L GV    +  G N +  L   
Sbjct: 461 AALRSDGTVWTWGMNRFGQLGEGTVTDRPT--PVQVVGLGGVTA--IATGDNHSLALRSN 516

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTP----------------------------------- 260
           G V   G N +GQLG G  +DR  P                                   
Sbjct: 517 GTVWAWGFNRYGQLGDGTAVDRRQPVQASGLSNIVAIAAGGSHSLALRSDGTVWAFGYNF 576

Query: 261 ----------KSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
                      ++ P++ VG  SVV +AAG  Y LA+  +G V+++G  ++  LG G   
Sbjct: 577 DGQLGNGTRTWTLVPVQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQ 636

Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
              QP  +Q     GI    ++AG  H +AL S G+V+ WG  + G LG+G    +  P 
Sbjct: 637 GSAQP--LQVPGLSGI--TSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPG 692

Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
            ++ + +  AV + A  + +  +   G+V+ +G    G LG  D
Sbjct: 693 LVAGMSN--AVAIIAGDQHSLAMKADGTVWAWGLNIKGQLGTGD 734



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 112/257 (43%), Gaps = 14/257 (5%)

Query: 112 GNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 170
           G    I TG  H+L L SN +V++ G +  G LG G   T       +     +++V ++
Sbjct: 498 GGVTAIATGDNHSLALRSNGTVWAWGFNRYGQLGDG---TAVDRRQPVQASGLSNIVAIA 554

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           A  +H+  +   G V+  G N     G+  T      P  V+A+       + AG  ++ 
Sbjct: 555 AGGSHSLALRSDGTVWAFGYNFDGQLGN-GTRTWTLVP--VQAVGLSSVVSLAAGSLYSL 611

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            L   G V   G N  GQLG G T     P  +  L     +  IAAG  + LA+  +G 
Sbjct: 612 ALRADGTVWAWGYNASGQLGVGTTQGSAQPLQVPGLS---GITSIAAGSYHSLALRSDGW 668

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+++G      LG+G     L P  +        + V + AGD+H +A+ + G V+ WG 
Sbjct: 669 VWAWGFNFEGQLGNGTSTPRLSPGLVAGMS----NAVAIIAGDQHSLAMKADGTVWAWGL 724

Query: 351 GYCGALGHGDEIDKTLP 367
              G LG GD  +   P
Sbjct: 725 NIKGQLGTGDTTEAWFP 741



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 11/205 (5%)

Query: 273 VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
           V++A G  + LAV  +G V+++G      LG G   D+  P  +         V  V+AG
Sbjct: 53  VRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGL----TQVTSVAAG 108

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
           D++ +ALD+ G V+ WG    G LG G    + LP+ +S+L +   V + +       L 
Sbjct: 109 DQYSLALDADGAVWAWGDNASGQLGDGTLTSRLLPQRVSALSN--VVSLASGFAHVLALR 166

Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
             G+V+ +G      LG    G   +   P  +  L    V  +  G   ++ +   G L
Sbjct: 167 ADGTVWAWGDNRNNQLG---DGTLTRSSVPLQVPGLSG--VVAVVAGGSSSLALRADGTL 221

Query: 453 FGFGDNERAQLGHDTLRGCLEPTEI 477
           + +GDN   QLG  T    + P ++
Sbjct: 222 WAWGDNRYGQLGDGTTVRRITPVQV 246



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 14/177 (7%)

Query: 87  NGNWKRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG 146
           NG     L  +Q+V  SS +V  +AG+        Y   L ++ +V++ G +  G LG G
Sbjct: 582 NGTRTWTLVPVQAVGLSS-VVSLAAGS-------LYSLALRADGTVWAWGYNASGQLGVG 633

Query: 147 PETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF 206
             TTQ  S   +  P  + +  ++A   H+  +   G V+  G N     G+  T+ P  
Sbjct: 634 --TTQG-SAQPLQVPGLSGITSIAAGSYHSLALRSDGWVWAWGFNFEGQLGN-GTSTPRL 689

Query: 207 RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
            P LV  +       + AG   +  +   G V   G N  GQLG GDT +   P  +
Sbjct: 690 SPGLVAGMSNAVA--IIAGDQHSLAMKADGTVWAWGLNIKGQLGTGDTTEAWFPVQV 744


>gi|408501214|ref|YP_006865133.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
 gi|408466038|gb|AFU71567.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
          Length = 1086

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 174/414 (42%), Gaps = 61/414 (14%)

Query: 119 TGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRI---------NFPSAAHVVQV 169
           TG +   + S+ + ++ G +  G LG G       +  R+         + P+    VQV
Sbjct: 566 TGSFSLAVGSDGNAYAWGDNTYGQLGDGTANNSRYTPIRVKTPDRKTYPDLPADFTYVQV 625

Query: 170 SASENHAAFVLQSGQVFTCGD------------NSSFCCGHRDTNRPIFRPRLVEALKGV 217
           SA   H+  V   G  +  G+            NS      RD   P    R ++A+   
Sbjct: 626 SAGGRHSLAVGSDGYAYAWGNNNNGQLGNNTKTNSYVPVRIRDPGSPTDESRGLKAI--- 682

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH---GDTLDRPTP----KSIAPLEE-V 269
              QV+AG   +  L+  G+ +  G + +GQLG+   G +   P P       +P +E +
Sbjct: 683 ---QVSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPILVRNPDSPTDESM 739

Query: 270 G-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG------EQHDELQPR----AIQT 318
           G   +Q++AG  + LA+  NG VY++G  S   LG        + H     R    A  +
Sbjct: 740 GLKTIQVSAGNLHSLALDSNGYVYAWGWNSYGQLGDNTNDISEDSHSAFPVRVRDPANPS 799

Query: 319 FRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID-----------KTLP 367
               G+  +++SAG +H +A+ S GY Y WG    G LG+    D           +   
Sbjct: 800 ETNMGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNPVPVHVRDPA 859

Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF---PDRGVSDKVLRP-R 423
            P  + K   A QV A    +  +   G  YG+G+  +G LG     D  V   V  P  
Sbjct: 860 NPTDTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTKTDSYVPVPVRDPAN 919

Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
             D+ +    +QIS+G +H++ V   G ++ +G+N   +LG  T  G L P  +
Sbjct: 920 PTDTNKGLKATQISSGYWHSMAVGSEGYVYAWGNNGNGRLGDGTTNGKLAPVSV 973



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 121/295 (41%), Gaps = 48/295 (16%)

Query: 115 MQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRI-----NFPSAAHV-- 166
           +Q++ G +H+L +SN    ++ G    G LG+    +   S   I     + P+   +  
Sbjct: 682 IQVSAGYWHSLALSNDGYAYAWGYDWYGQLGNNTSGSSEYSPFPILVRNPDSPTDESMGL 741

Query: 167 --VQVSASENHAAFVLQSGQVFTCGDNS-----------------SFCCGHRDTNRPIFR 207
             +QVSA   H+  +  +G V+  G NS                 +F    RD   P   
Sbjct: 742 KTIQVSAGNLHSLALDSNGYVYAWGWNSYGQLGDNTNDISEDSHSAFPVRVRDPANP--- 798

Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLD----RPTPKSI 263
               E   G+   Q++AG + +  +   G+ +  G N  GQLG+    D     P P  +
Sbjct: 799 ---SETNMGLKAIQISAGYDHSMAVGSDGYAYAWGWNVKGQLGNNTISDSYSGNPVPVHV 855

Query: 264 -APLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
             P     +       Q++AG  + LAV  +G  Y +G      LG+  + D   P  ++
Sbjct: 856 RDPANPTDTSKGLKATQVSAGYWHSLAVGSDGYAYGWGYNWYGQLGNNTKTDSYVPVPVR 915

Query: 318 -----TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
                T   KG+   ++S+G  H +A+ S GYVY WG    G LG G    K  P
Sbjct: 916 DPANPTDTNKGLKATQISSGYWHSMAVGSEGYVYAWGNNGNGRLGDGTTNGKLAP 970


>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
           str. Neff]
          Length = 972

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 114/231 (49%), Gaps = 10/231 (4%)

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGP 279
           Q+  G   +  LT  GHV+T G   +GQLGHG   D   PK +  L     ++  I  G 
Sbjct: 139 QIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGTRKDLDRPKRVEALVRAQQTITSIGVGF 198

Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDEHVVA 338
               A+  +GVV+S+G    + LGH  Q D + QP+ +   + K   +++V+AG +H + 
Sbjct: 199 DQTFAINADGVVHSWGRQGPW-LGHAAQPDHVKQPQEVGLLKNKA-KIMQVAAGKQHTLL 256

Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTL--PEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
           L   G VY+ GK   G LG G  + K    P P++SL +++  QV A ++ + VL   GS
Sbjct: 257 LTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNYVITQVAAGEKHSVVLASDGS 316

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
           V  FG    G LG  D    D    PR +  +       I+ G  HT+V+T
Sbjct: 317 VLTFGSGSNGRLGHGDTKNQD---VPRTVQGV-FDKACAIAAGFEHTIVLT 363



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 112/232 (48%), Gaps = 7/232 (3%)

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G  ++ G    G+LGHG   +   PK    LE  G V QI  G  + + +T  G VY+FG
Sbjct: 104 GTAYSFGQGEWGKLGHGGAANEQHPKQ---LEVQGKVTQIGVGDQHSVLLTDGGHVYTFG 160

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
            G    LGHG + D  +P+ ++   R    +  +  G +   A+++ G V++WG+     
Sbjct: 161 QGIYGQLGHGTRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSWGR-QGPW 219

Query: 356 LGHGDEIDKT-LPEPLSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           LGH  + D    P+ +  LK+   + QV A K+ T +L   G VY  G    G LG   +
Sbjct: 220 LGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDGCLG-QGK 278

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
            V  +   P  + SL  + ++Q++ G  H+VV+   G +  FG     +LGH
Sbjct: 279 TVKKETANPMPITSLNNYVITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGH 330



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 112/249 (44%), Gaps = 12/249 (4%)

Query: 124 TLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 183
           T  + + + +S G    G LGHG    +              V Q+   + H+  +   G
Sbjct: 98  TTAVEDGTAYSFGQGEWGKLGHGGAANEQHP---KQLEVQGKVTQIGVGDQHSVLLTDGG 154

Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR--GHVHTC 241
            V+T G       GH  T + + RP+ VEAL        + G+ F     I   G VH+ 
Sbjct: 155 HVYTFGQGIYGQLGH-GTRKDLDRPKRVEALVRAQQTITSIGVGFDQTFAINADGVVHSW 213

Query: 242 GSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNF 300
           G      LGH    D    P+ +  L+    ++Q+AAG  + L +T +G VYS G   + 
Sbjct: 214 GRQGP-WLGHAAQPDHVKQPQEVGLLKNKAKIMQVAAGKQHTLLLTIDGKVYSMGKNKDG 272

Query: 301 CLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
           CLG G+  + +   P  I +       + +V+AG++H V L S G V T+G G  G LGH
Sbjct: 273 CLGQGKTVKKETANPMPITSLNN--YVITQVAAGEKHSVVLASDGSVLTFGSGSNGRLGH 330

Query: 359 GDEIDKTLP 367
           GD  ++ +P
Sbjct: 331 GDTKNQDVP 339



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 105/241 (43%), Gaps = 26/241 (10%)

Query: 112 GNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS 170
           G   QI  G  H++L+++   V++ G  + G LGHG         TR +      V  + 
Sbjct: 135 GKVTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHG---------TRKDLDRPKRVEALV 185

Query: 171 ASEN---------HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG-VPCK 220
            ++             F + +  V           GH      + +P+ V  LK      
Sbjct: 186 RAQQTITSIGVGFDQTFAINADGVVHSWGRQGPWLGHAAQPDHVKQPQEVGLLKNKAKIM 245

Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT--PKSIAPLEEVGSVVQIAAG 278
           QV AG   T  LTI G V++ G N  G LG G T+ + T  P  I  L     + Q+AAG
Sbjct: 246 QVAAGKQHTLLLTIDGKVYSMGKNKDGCLGQGKTVKKETANPMPITSLNNY-VITQVAAG 304

Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
             + + +  +G V +FGSGSN  LGHG+  ++  PR +Q    K      ++AG EH + 
Sbjct: 305 EKHSVVLASDGSVLTFGSGSNGRLGHGDTKNQDVPRTVQGVFDK---ACAIAAGFEHTIV 361

Query: 339 L 339
           L
Sbjct: 362 L 362



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 18/190 (9%)

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V SFG   N  LG+ E +D   PR++         ++ + AG    VA++S G  Y WG 
Sbjct: 7   VVSFGLNFNGQLGY-ECYDNKNPRSVNAPS----DLISLHAGWNCSVAVNSEGTPYFWGT 61

Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR---KTFVLVDTGSVYGFGWMGFGS 407
                 G    ++   P PL ++   +  ++  R+     T   V+ G+ Y FG   +G 
Sbjct: 62  MPSKYDGKAKFLE---PSPLPAIS--IGFKLAHRRMLMAPTTTAVEDGTAYSFGQGEWGK 116

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG    G +     P+ L+      V+QI  G  H+V++TD G ++ FG     QLGH T
Sbjct: 117 LG---HGGAANEQHPKQLEV--QGKVTQIGVGDQHSVLLTDGGHVYTFGQGIYGQLGHGT 171

Query: 468 LRGCLEPTEI 477
            +    P  +
Sbjct: 172 RKDLDRPKRV 181


>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 750

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 156/355 (43%), Gaps = 26/355 (7%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           M +   + H+L + S+++V++ G +  G LG G    + V    +  P  + VV V+A  
Sbjct: 400 MAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVP---VPVPKLSSVVAVAAGR 456

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGH-RDTNR--PIFRPRLVEALKGVPCKQVTAGLNFTG 230
            H+  V   G V+  GDN     G   +T+R  P+  P L   +       V AG N + 
Sbjct: 457 YHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGVA------VAAGENHSL 510

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            L   G V   G N +GQLG+G T D P P  +  L      V +AAG  Y LAV  +G 
Sbjct: 511 VLRSDGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLS---GGVAVAAGQYYSLAVRSDGT 567

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
           V+++G      LG G   D   P  +Q     G   V V+AG  H + + S G V+ WG 
Sbjct: 568 VWAWGLNFEGQLGDGTASDSPVPVRVQVPGLSGG--VAVAAGTSHALVVRSDGTVWAWGS 625

Query: 351 GYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
            Y G +G G    + L P  +  L   +AV   A    +  +   GSV+ +G    G LG
Sbjct: 626 NYDGQVGEGAPRRRVLMPVQVQGLSEGMAV--AAGYNHSLAVRSDGSVWAWGGNTAGVLG 683

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
               G +D+   P     L       ++ G  H++V+   G  +  G N   Q+G
Sbjct: 684 ---DGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQIG 733



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 27/368 (7%)

Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L L S+ +V++ GS+  G LG G   T  VS   +       VV V+A E
Sbjct: 148 VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDG---TTNVSLVPVRVKKLTGVVAVAAGE 204

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
            H+  V   G V+T G N     G   T +R +  P  V+ L G     V  G+  +  +
Sbjct: 205 KHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKV--PVQVQGLSG--GVAVAGGVYHSLAV 260

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGV 290
              G V   G+N  GQLG G     P  + + P++  G   V  +AAG S  LAV  +G 
Sbjct: 261 RSDGTVWGWGANGVGQLGDGT----PMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGT 316

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH-VVRVSAGDEHVVALDSSGYVYTWG 349
           V+++G  S   LG    +D ++  +    +  G+   V V A   H +A+ S G V+ WG
Sbjct: 317 VWAWGGNSYGALG----NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWG 372

Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             + G LG G   ++ +  P+  L   +A  V AR+  +  +    +V+ +G    G LG
Sbjct: 373 GNHYGQLGDGTTSERLVAVPVQGLSGVMA--VAARQEHSLAVRSDATVWAWGRNYEGQLG 430

Query: 410 FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLR 469
               G + +   P  +  L +  V  ++ G YH++ V   G ++ +GDNE  Q+G  T  
Sbjct: 431 ---DGTTRRREVPVPVPKLSS--VVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTET 485

Query: 470 GCLEPTEI 477
               P  +
Sbjct: 486 SRKAPVRV 493



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 181/401 (45%), Gaps = 30/401 (7%)

Query: 91  KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETT 150
           +RVL  +Q+ +  S +   +AG+ + +   R+      + +V++ G +  G LG+  +T 
Sbjct: 284 RRVLVPVQA-QGLSGVEAVAAGHSLSLAV-RF------DGTVWAWGGNSYGALGN--DTI 333

Query: 151 QCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN-RPIFRPR 209
           + +S   +  P  +  V V A+ +HA  V   G V+  G N     G   T+ R +  P 
Sbjct: 334 ETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTSERLVAVP- 392

Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
            V+ L GV    V A    +  +     V   G N  GQLG G T  R  P    P+ ++
Sbjct: 393 -VQGLSGV--MAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTRRREVP---VPVPKL 446

Query: 270 GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
            SVV +AAG  + LAV  +G V+++G      +G G +     P  +          V V
Sbjct: 447 SSVVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGG----VAV 502

Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
           +AG+ H + L S G V+ WG  + G LG+G   D  +P  +  L   +A  V A +  + 
Sbjct: 503 AAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLSGGVA--VAAGQYYSL 560

Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
            +   G+V+ +G    G LG  D   SD  +  R+     +  V+ ++ G  H +VV   
Sbjct: 561 AVRSDGTVWAWGLNFEGQLG--DGTASDSPVPVRVQVPGLSGGVA-VAAGTSHALVVRSD 617

Query: 450 GRLFGFGDNERAQLGHDT-LRGCLEPTEIFIQEMEEDTGLA 489
           G ++ +G N   Q+G     R  L P +  +Q + E   +A
Sbjct: 618 GTVWAWGSNYDGQVGEGAPRRRVLMPVQ--VQGLSEGMAVA 656



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 142/311 (45%), Gaps = 19/311 (6%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  GRYH+L +  + +V++ G +  G +G G ET++      +  P+    V V+A E
Sbjct: 450 VAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAP---VRVPNLGGGVAVAAGE 506

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
           NH+  +   G V+  G N     G+  T + P+  P  V+ L G     V AG  ++  +
Sbjct: 507 NHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPV--PVQVQGLSG--GVAVAAGQYYSLAV 562

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
              G V   G N  GQLG G   D P P  +  +  +   V +AAG S+ L V  +G V+
Sbjct: 563 RSDGTVWAWGLNFEGQLGDGTASDSPVPVRVQ-VPGLSGGVAVAAGTSHALVVRSDGTVW 621

Query: 293 SFGSGSNFCLGHGEQHDE-LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           ++GS  +  +G G      L P  +Q         + V+AG  H +A+ S G V+ WG  
Sbjct: 622 AWGSNYDGQVGEGAPRRRVLMPVQVQGLSEG----MAVAAGYNHSLAVRSDGSVWAWGGN 677

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G    +T+P     L    A  V A +  + VL   G+ +  G    G +G  
Sbjct: 678 TAGVLGDGTTDRRTVPVQAQGLTGARA--VAAGESHSLVLRSDGTGWAMGSNASGQIG-- 733

Query: 412 DRGVSDKVLRP 422
           D G + +V  P
Sbjct: 734 DGGPTQQVSTP 744



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 163/366 (44%), Gaps = 23/366 (6%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + +  G  H+L + S+ +V++ G +  G LG G  +++ V    +     +  V V+   
Sbjct: 198 VAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKVP---VQVQGLSGGVAVAGGV 254

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
            H+  V   G V+  G N     G     R +  P   + L GV  + V AG + +  + 
Sbjct: 255 YHSLAVRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSGV--EAVAAGHSLSLAVR 312

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG--SVVQIAAGPSYMLAVTGNGVV 291
             G V   G N++G LG+ DT++     S  P++  G    V + A  S+ LAV  +G V
Sbjct: 313 FDGTVWAWGGNSYGALGN-DTIET---MSTVPVQVPGLSGGVTVVAASSHALAVRSDGTV 368

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G      LG G   + L    +Q        V+ V+A  EH +A+ S   V+ WG+ 
Sbjct: 369 WAWGGNHYGQLGDGTTSERLVAVPVQGLS----GVMAVAARQEHSLAVRSDATVWAWGRN 424

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
           Y G LG G    + +P P+  L S +A  V A +  +  +   G+V+ +G   +G +G  
Sbjct: 425 YEGQLGDGTTRRREVPVPVPKLSSVVA--VAAGRYHSLAVRFDGTVWAWGDNEYGQVG-- 480

Query: 412 DRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGC 471
             G       P  + +L       ++ G  H++V+   G ++ +G N   QLG+      
Sbjct: 481 -DGTETSRKAPVRVPNLGGG--VAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNGITSDS 537

Query: 472 LEPTEI 477
             P ++
Sbjct: 538 PVPVQV 543



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 159/382 (41%), Gaps = 31/382 (8%)

Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQV 169
           + +  G YH+L + S+ +V+  G++  G LG G          R+  P  A     V  V
Sbjct: 248 VAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDG------TPMRRVLVPVQAQGLSGVEAV 301

Query: 170 SASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT 229
           +A  + +  V   G V+  G NS    G+         P  V  L G     VT     +
Sbjct: 302 AAGHSLSLAVRFDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSG----GVTVVAASS 357

Query: 230 GFLTIR--GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
             L +R  G V   G N +GQLG G T +R       P++ +  V+ +AA   + LAV  
Sbjct: 358 HALAVRSDGTVWAWGGNHYGQLGDGTTSERLV---AVPVQGLSGVMAVAARQEHSLAVRS 414

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           +  V+++G      LG G       P  +         VV V+AG  H +A+   G V+ 
Sbjct: 415 DATVWAWGRNYEGQLGDGTTRRREVPVPVPKLS----SVVAVAAGRYHSLAVRFDGTVWA 470

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    G +G G E  +  P  + +L   +AV   A +  + VL   G+V+ +G   +G 
Sbjct: 471 WGDNEYGQVGDGTETSRKAPVRVPNLGGGVAV--AAGENHSLVLRSDGTVWAWGGNHYGQ 528

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG    G++     P  +  L       ++ G Y+++ V   G ++ +G N   QLG  T
Sbjct: 529 LG---NGITSDSPVPVQVQGLSGG--VAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGT 583

Query: 468 LRGCLEPTEIFIQEMEEDTGLA 489
                 P  + +  +     +A
Sbjct: 584 ASDSPVPVRVQVPGLSGGVAVA 605



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 136/304 (44%), Gaps = 23/304 (7%)

Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
           +++   NH+  V   G V+  G+N     G   T+     P  V+ L GV    V  G  
Sbjct: 50  RIATGANHSWAVRPDGTVWAVGENVFGQLGDGTTSERRV-PVQVQGLSGVVA--VAVGAY 106

Query: 228 FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTG 287
            +  L   G V   G     Q G G   D   P   AP+  +   V +AAG  + LA+  
Sbjct: 107 HSLALRSDGTVWAVGRAAC-QGGDGTASDCTVP---APVPGLSGGVAVAAGGLHSLALRS 162

Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           +G V+++GS     LG G  +  L P  +    +K   VV V+AG++H +A+ S G V+T
Sbjct: 163 DGTVWAWGSNFEGQLGDGTTNVSLVPVRV----KKLTGVVAVAAGEKHSLAVRSDGTVWT 218

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    GALG G    + +P  +  L   +A  V      +  +   G+V+G+G  G G 
Sbjct: 219 WGFNGYGALGDGTTSSRKVPVQVQGLSGGVA--VAGGVYHSLAVRSDGTVWGWGANGVGQ 276

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVS---QISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
           LG       D     R+L  ++A  +S    ++ G   ++ V   G ++ +G N    LG
Sbjct: 277 LG-------DGTPMRRVLVPVQAQGLSGVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALG 329

Query: 465 HDTL 468
           +DT+
Sbjct: 330 NDTI 333


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 128/294 (43%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  +T         N  +F  G++ CG LG G +    +   R++  S   +   
Sbjct: 123 SAGNEVLYST--------VNDEIFVLGTNCCGCLGLG-DIQSTIEPRRLDSLSGKKIACF 173

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G++FT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 174 SYGSGPHVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 233

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T ++P P+ +    +   VV IA G    +AV  N
Sbjct: 234 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDN 293

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   ++  P  I     +GI V RV+ G  H + L   G VY W
Sbjct: 294 GEVYVWGYNGNGQLGLGSSGNQSTPCRIAAL--QGICVQRVACGYAHTLVLTDEGQVYVW 351

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P++  K   + +  C     +      G VY +G
Sbjct: 352 GANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 405



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 121/253 (47%), Gaps = 7/253 (2%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE-EVGSVVQIAAGPSYMLAVTGNG 289
           + T+   +   G+N  G LG GD      P+ +  L  +  +     +GP  +LA T  G
Sbjct: 130 YSTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKIACFSYGSGPHVILATT-EG 188

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            ++++G  +   LG+G  +  L P  I T       V+ V+ G  H + L S G V+ WG
Sbjct: 189 EIFTWGHNAYSQLGNGTTNHGLVPCHIST-NLSNKQVIEVACGSYHSLVLTSDGEVFAWG 247

Query: 350 KGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
               G +G G   ++ +P  ++  L++ + V +   +  +  +VD G VY +G+ G G L
Sbjct: 248 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQL 307

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTL 468
           G    G S     P  + +L+   V +++ G  HT+V+TD G+++ +G N   QLG    
Sbjct: 308 GL---GSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNK 364

Query: 469 RGCLEPTEIFIQE 481
                PT + +++
Sbjct: 365 SNQSYPTPVAVEK 377



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 126 NEVLYSTVNDEIFVLGTNCCGCLGLGDIQSTI-EPRRLDSLSGKKIACFSYGSGPHVI-L 183

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G + T G N + QLG+G T     P  I+       V+++A G  + L +T +G V
Sbjct: 184 ATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 243

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  + VV ++ G    VA+  +G VY WG  
Sbjct: 244 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VVNIACGQMCSVAVVDNGEVYVWGYN 302

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G   +++ P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 303 GNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLG 360


>gi|348573398|ref|XP_003472478.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Cavia
           porcellus]
          Length = 992

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE--QHDELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGPEVLEPMQLNFF 477

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 535

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 429
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCIGVDKIAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCG 540

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 273
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 SDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 334 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERSHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 387 KTFVLVD 393
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCIGV-DKIAGPEVLEPMQLNFFLSNPVEQ 484

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H VV+T    ++ +G  E  +LG D+      P  + +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 528



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 289
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCIG----VDKIAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGSDGTFLLTQSGKVLACG 557

Query: 350 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 396
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 456 GDNERAQLGHDTLRGCLEPTE 476
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 130/331 (39%), Gaps = 20/331 (6%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 196 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 IGVDKIAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 255 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 305
            D  TP+ +  P   +   VQ  +  +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQRVDVPKALIIVAVQCGSDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 306 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 365 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP----DRGVSDKV 419
                L   L     ++V      T    D   ++ +G  G G L         G     
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERSHGSDICT 697

Query: 420 LRPR-ILDSLRAHHVSQISTGLYHTVVVTDR 449
             PR I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRPIFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)

Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 395
           V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+    
Sbjct: 341 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 388

Query: 396 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
            +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L+
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLY 448

Query: 454 GFGDNERAQLGHDTLRG--CLEPTEI 477
            FG +    +G D + G   LEP ++
Sbjct: 449 AFGSDYYGCIGVDKIAGPEVLEPMQL 474


>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
          Length = 345

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALHS--VCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Strongylocentrotus purpuratus]
          Length = 658

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 10/296 (3%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           ++  V ++ +VF  G NSS       +   I  P++  A+     +Q+ AG   T  ++ 
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAE-GSQEKILLPKM--AISFAESQQIEAGQYCTFVISS 423

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS-YMLAVTGNGVVYS 293
            G V  CG  ++G+LG GD+ ++   K +     + + +  + G   + LA+T  G V+S
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFS 483

Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
           +G G    LGHG    +  P+ I      G  VV +SAG  H   +   G +YTWG+G  
Sbjct: 484 WGDGDYGKLGHGNTLTQKYPKVILGVLM-GKVVVCISAGYRHSACVTDDGQLYTWGEGDY 542

Query: 354 GALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDR 413
           G LGHGD   + +P  +  + S++   VC       V  D+ +V+ FG    G LG  D 
Sbjct: 543 GRLGHGDSNSRNVPTLVKDV-SNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKLGHGD- 600

Query: 414 GVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLGHDTL 468
             ++++ +P+I++SL    + ++  G   ++ +T  G++ F F   +R +    +L
Sbjct: 601 --TNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQVRFIFYKYQRLKKKKSSL 654



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 130/281 (46%), Gaps = 12/281 (4%)

Query: 121 RYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
           + ++L++S NS VF  GS+    L  G +    +    I+F   A   Q+ A + +  FV
Sbjct: 365 KPNSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKMAISF---AESQQIEAGQ-YCTFV 420

Query: 180 LQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN-FTGFLTIRGH 237
           + S G V  CG  S    G  D+N      +L      +     + G +  T  LT  G 
Sbjct: 421 ISSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQ 480

Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
           V + G   +G+LGHG+TL +  PK I  +     VV I+AG  +   VT +G +Y++G G
Sbjct: 481 VFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540

Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL-DSSGYVYTWGKGYCGAL 356
               LGHG+ +     R + T  +   +V +V  G  H +A+   S  V+++G G  G L
Sbjct: 541 DYGRLGHGDSNS----RNVPTLVKDVSNVGKVVCGSSHTIAVSQDSRTVWSFGGGDNGKL 596

Query: 357 GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
           GHGD      P+ + SL      +V    + +  L  TG V
Sbjct: 597 GHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQV 637


>gi|335292799|ref|XP_003356800.1| PREDICTED: serine/threonine-protein kinase Nek9 [Sus scrofa]
          Length = 985

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 SNNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 429
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  ++ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF S   V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFSNNPVEQVS 486

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 273
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            +A G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 334 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 387 KTFVLVD 393
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+    + V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFSNNPVEQ 484

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 196 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 255 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 305
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 306 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
             H+     +    ++   + +R V+ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 365 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 417
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTETPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 289
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNK 499

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 350 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 396
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGR 617

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 456 GDNERAQLGHDTLRGCLEPTE 476
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 394
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQL 447

Query: 453 FGFGDNERAQLGHDTLRG--CLEPTEI 477
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
 gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
           leucogenys]
          Length = 531

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 11/255 (4%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSGYVYT 347
           GVVY++G      LG+G  +  + P  IQ      I  VV V+ G  H +AL + G V+ 
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEVFA 151

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFG 406
           WG   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNG 211

Query: 407 SLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
            LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG  
Sbjct: 212 QLGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTG 268

Query: 467 TLRGCLEPTEIFIQE 481
                L P  I +++
Sbjct: 269 NKNNLLSPAHIMVEK 283



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|354481280|ref|XP_003502830.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Cricetulus
           griseus]
          Length = 1019

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 23/276 (8%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 402 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 461

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 462 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFF 520

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HVVAL  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 521 LSNPVE--QVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 578

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-----------RILDSL 428
            V      TF+L  +G V   G   F  LG  ++ +S  +               +   L
Sbjct: 579 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGL-NQCMSGIINHEAYHEVPYTTSFTLAKQL 637

Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
             + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 638 SFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 673



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 38/306 (12%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPET-TQCVSFTRINFPSAAHVVQVSASE 173
           Q++ G   T+ +++   +++ GS   G +G    + ++ +   ++NF  +  V QVS  +
Sbjct: 473 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGSEVLEPMQLNFFLSNPVEQVSCGD 532

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G + 
Sbjct: 533 NHVVALTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDG 586

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVVQIA 276
           T  LT  G V  CG N   +LG    +          + P   S    +++    +  IA
Sbjct: 587 TFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIA 646

Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF--RRKGIHVVRVSAGDE 334
            G ++  A+   G + +FG      LG G     L    I        G  V+RVS GDE
Sbjct: 647 PGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRL---GINLLGGPLGGKQVIRVSCGDE 703

Query: 335 HVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKRK 387
             +A     +++ WG G  G L        HG +I  + P P+     H+    C R   
Sbjct: 704 FTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGWH 762

Query: 388 TFVLVD 393
           T ++V+
Sbjct: 763 TILIVE 768



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 409 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 468

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 469 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGSEVLEPMQLNFFLSNPVEQ 527

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H V +T    ++ +G  E  +LG D+      P  + +
Sbjct: 528 VSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 571



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 22/332 (6%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 442 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 500

Query: 196 CG-HRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
            G  + +   +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 501 MGVDKVSGSEVLEPMQLNFFLSNPVEQVSCGDNHVVALTRNKEVYSWGCGEYGRLGLDSE 560

Query: 255 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 305
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 561 EDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 620

Query: 306 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 621 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 680

Query: 365 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 417
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 681 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 740

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 741 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 769



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 373 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 428

Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
              +++T      G       GH D  +  +R P+ VE L+G    QV+ G +FT  +T 
Sbjct: 429 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 486

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 289
            G ++  GS+ +G +G    +D+ +  + + P++        V Q++ G ++++A+T N 
Sbjct: 487 EGQLYAFGSDYYGCMG----VDKVSGSEVLEPMQLNFFLSNPVEQVSCGDNHVVALTRNK 542

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 543 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 600

Query: 350 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 396
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 601 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 660

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 661 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 717

Query: 456 GDNERAQLGHDTLRGCLEPTE 476
           G+    +L        + PTE
Sbjct: 718 GNGGNGRLA-------MTPTE 731



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 394
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 383 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 430

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 431 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQL 490

Query: 453 FGFGDNERAQLGHDTLRG--CLEPTEI 477
           + FG +    +G D + G   LEP ++
Sbjct: 491 YAFGSDYYGCMGVDKVSGSEVLEPMQL 517


>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
          Length = 526

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 128/294 (43%), Gaps = 14/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  VF  G++ CG LG G +    +   R++  S   +  +
Sbjct: 29  SAGNEVLYTT--------VNDEVFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACL 79

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 80  SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYH 139

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T ++P P+ +    +   VV IA G    +AV  N
Sbjct: 140 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDN 199

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   ++  P  +     +G+ V RV+ G  H + L   G VY W
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGNQSTPCRLAL---QGVRVQRVACGYAHTLVLTDEGQVYAW 256

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P+   K   + +  C     +      G VY +G
Sbjct: 257 GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 310



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 134/282 (47%), Gaps = 11/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   V   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEVFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL-SSLKSHLAV 379
               HV+ V+ G  H + L S G V+ WG    G +G G   ++ +P  + SSL++ + V
Sbjct: 125 LSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVV 184

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +VD G VY +G+ G G LG    G      R     +L+   V +++ G
Sbjct: 185 NIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRL----ALQGVRVQRVACG 240

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + +++
Sbjct: 241 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEK 282


>gi|157849750|gb|ABV89658.1| UVB-resistance protein UVR8 [Brassica rapa]
          Length = 537

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 150/341 (43%), Gaps = 36/341 (10%)

Query: 133 FSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNS 192
           ++ G +  G LGHG +  Q    T ++  S   +V+  A  NH   V   G+ F  G N 
Sbjct: 79  YTWGRNEKGQLGHG-DMIQRDRPTVVSGLSKYKIVKAGAGRNHTVVVSDEGRSFAFGWNK 137

Query: 193 SFCCGHRDTNRPIFRPRLVEALKGVPC------KQVTAGLNFTGFL--TIRGHVHTCGSN 244
               G   T +  F    VE+   VPC        +  G +FT +L  T    + T G  
Sbjct: 138 HGQLG-LGTAKNGFVSVEVESSP-VPCVVSDEVTSIACGADFTVWLSSTEGASILTAGLP 195

Query: 245 THGQLGHGDTLD--------------RPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
            +GQLGHG   +              +P PK+IA L    ++V++A G ++ +AV  NG 
Sbjct: 196 QYGQLGHGTDNEFNMKDGSVKLAYEAQPRPKAIASLAGE-TIVKVACGANHTVAVDKNGF 254

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVR--VSAGDEHVVALDSSGYVYTW 348
           VY++G G    LGH EQ DE  PR I  F+R  +      VSAG  +       G +Y W
Sbjct: 255 VYTWGFGGYGRLGHREQKDEWSPRRIDVFQRNNVLPPNAIVSAGSANSACTAGGGQLYMW 314

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           GK       +GD  D   P+P+  L       + +     FV  D+ S   +G   +G L
Sbjct: 315 GK----IKNNGD--DWMYPKPMMDLSGWNLRWMDSGSMHHFVGADS-SCISWGHAQYGEL 367

Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
           G+   G       P+ +D L   HV  ++ G  H++V+ DR
Sbjct: 368 GYGPHGQKSSAA-PKKVDILEGMHVMGVACGFCHSMVIVDR 407



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 63/137 (45%), Gaps = 4/137 (2%)

Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
           H VALD  G  YTWG+   G LGHGD I +  P  +S L  +  V+  A +  T V+ D 
Sbjct: 68  HCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKYKIVKAGAGRNHTVVVSDE 127

Query: 395 GSVYGFGWMGFGSLGF--PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV--TDRG 450
           G  + FGW   G LG      G     +    +  + +  V+ I+ G   TV +  T+  
Sbjct: 128 GRSFAFGWNKHGQLGLGTAKNGFVSVEVESSPVPCVVSDEVTSIACGADFTVWLSSTEGA 187

Query: 451 RLFGFGDNERAQLGHDT 467
            +   G  +  QLGH T
Sbjct: 188 SILTAGLPQYGQLGHGT 204



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 3/83 (3%)

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
           G  Y +G    G LG  D    D   RP ++  L  + + +   G  HTVVV+D GR F 
Sbjct: 76  GRCYTWGRNEKGQLGHGDMIQRD---RPTVVSGLSKYKIVKAGAGRNHTVVVSDEGRSFA 132

Query: 455 FGDNERAQLGHDTLRGCLEPTEI 477
           FG N+  QLG  T +      E+
Sbjct: 133 FGWNKHGQLGLGTAKNGFVSVEV 155


>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
          Length = 453

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 135/285 (47%), Gaps = 13/285 (4%)

Query: 201 TNRPIF---RPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLD 256
           T  PIF    P  +  ++ + C   +AG N    +T    V++ GSN  G LG G D + 
Sbjct: 6   TKWPIFSLLEPSFIATIR-MACVLGSAG-NEAIVITNDDEVYSLGSNCSGCLGLGSDAMS 63

Query: 257 RPTPKSIAPLEEVGSVVQIAAGP-SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRA 315
              P+ +  L +  ++V  A G   ++LA T  G VYS+G      LG+G  +    P  
Sbjct: 64  GLEPRKVEQLCK-KNIVSFAYGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTP 122

Query: 316 IQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LK 374
           + T    G  +  ++ G  H +AL S G ++ WG+  CG +G G   ++  P  +++ + 
Sbjct: 123 V-TSSLLGKRITAIACGSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRKVTACIG 181

Query: 375 SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVS 434
           S   + +   +  +    DTG V+G+G+ G G LG  +        R  +L+++    ++
Sbjct: 182 SKKCISIACGQTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLVVLNNV---FIT 238

Query: 435 QISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           QI+ G  HT+ +TD G L+ +G N   QLG       + P  I +
Sbjct: 239 QIACGYAHTLGLTDEGSLYAWGANSYGQLGTGNKANMISPVRIAV 283



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 122/293 (41%), Gaps = 20/293 (6%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG--- 230
           N A  +    +V++ G N S C G          PR VE L    CK+      +     
Sbjct: 33  NEAIVITNDDEVYSLGSNCSGCLGLGSDAMSGLEPRKVEQL----CKKNIVSFAYGSGPH 88

Query: 231 --FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
               T  G V++ G N + QLG+G T   PTP  +        +  IA G  + +A++  
Sbjct: 89  VLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMALSSE 148

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G ++++G  +   +G G   ++  PR + T        + ++ G    +A   +G V+ W
Sbjct: 149 GEIFAWGQNNCGQVGSGTTSNQPTPRKV-TACIGSKKCISIACGQTSSIAAFDTGEVFGW 207

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
           G    G LG G+ I++  P  L  L +    Q+      T  L D GS+Y +G   +G L
Sbjct: 208 GYNGNGQLGLGNNINQPNPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWGANSYGQL 267

Query: 409 GFPDRGVSDKVLRPRI----LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
           G  ++      +R  +       + A H + +S  L      T  G++F +G 
Sbjct: 268 GTGNKANMISPVRIAVDLGRFVEIAATHYNHLSAAL------TQAGKVFMWGQ 314



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 12/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN+  + T        ++  V+S GS+  G LG G +    +   ++      ++V  
Sbjct: 30  SAGNEAIVIT--------NDDEVYSLGSNCSGCLGLGSDAMSGLEPRKVEQLCKKNIVSF 81

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           +  S  H      +G+V++ G N     G+  TN+      +  +L G     +  G + 
Sbjct: 82  AYGSGPHVLATTNAGEVYSWGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHH 141

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  L+  G +   G N  GQ+G G T ++PTP+ +         + IA G +  +A    
Sbjct: 142 SMALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRKVTACIGSKKCISIACGQTSSIAAFDT 201

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G V+ +G   N  LG G   +  QP   +      + + +++ G  H + L   G +Y W
Sbjct: 202 GEVFGWGYNGNGQLGLGNNIN--QPNPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAW 259

Query: 349 GKGYCGALGHGDEIDKTLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +   P  ++  L   + +        +  L   G V+ +G
Sbjct: 260 GANSYGQLGTGNKANMISPVRIAVDLGRFVEIAATHYNHLSAALTQAGKVFMWG 313


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 126/294 (42%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 29  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACL 79

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 80  SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYH 139

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T ++P P+ +    +    V IA G    +AV   
Sbjct: 140 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNT 199

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAW 257

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P+   K   + +  C     +      G VY +G
Sbjct: 258 GANSYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 8   PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 66

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 67  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 124

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V  V+ G  H + L S G V+ WG    G +G G   ++ +P  ++  L++ +AV
Sbjct: 125 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAV 184

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +V+TG VY +G+ G G LG    G      R   L  +R   V +++ G
Sbjct: 185 NIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VQRVACG 241

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         P  + +++
Sbjct: 242 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIVEK 283



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 32  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 89

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V ++A G  + L +T +G V
Sbjct: 90  ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 149

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  +  V ++ G    +A+ ++G VY WG  
Sbjct: 150 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-AVNIACGQMCSMAVVNTGEVYVWGYN 208

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG
Sbjct: 209 GNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 266


>gi|330837333|ref|YP_004411974.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
 gi|329749236|gb|AEC02592.1| hypothetical protein Spico_1388 [Sphaerochaeta coccoides DSM 17374]
          Length = 708

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 145/334 (43%), Gaps = 24/334 (7%)

Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG----VPCKQVTA 224
           VSA   H   +  +G ++  GDN     G   T+      ++ +   G         V A
Sbjct: 338 VSAGSYHTMILKNNGTLWATGDNRFGQLGDGTTDDRSIPVQVKDDTDGSGFMTDVAAVAA 397

Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTP----KSIAPLEEVGSVVQIAAGPS 280
           G N T  L   G +   G N  GQLG G T DR TP     S  P + +  V  ++AG  
Sbjct: 398 GENHTMILKKDGTLWATGYNGEGQLGDGTTTDRSTPVQVKASTDPNDFMTDVAAVSAGNE 457

Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
           Y + +  +G +++ G   +  LG G+  +   P  + T       V  VSAG EH + L 
Sbjct: 458 YTMILKKDGTLWATGYNDSSQLGVGDNTNRSTPVQVMT------GVAAVSAGLEHTMILK 511

Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
             G ++  G    G LG G+  +K+ P P+S + S +A +V A    T +L   G+++  
Sbjct: 512 KDGTLWATGWNSAGELGIGNNENKSTPVPVSFMGSDVA-EVSAGSSYTMILKKDGTLWAT 570

Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRA-----HHVSQISTGLYHTVVVTDRGRLFGF 455
           G+  +G LG    G       P  + +         +V+ +S G  +T+++   G L+  
Sbjct: 571 GFNYYGELGLGTSGSGTNKSTPEQVKASTTPDDFMTNVAAVSAGSSYTMILKKDGTLWAT 630

Query: 456 GDNERAQLGHDTLRGCLEPTEIFIQEMEEDTGLA 489
           G N+  QLG D   G +      +Q M   TG+A
Sbjct: 631 GSNQYGQLG-DGTSGAVNNKSTPVQVM---TGVA 660



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 162/369 (43%), Gaps = 37/369 (10%)

Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA----HVVQVSA 171
           ++ G YHT+++ N+ ++++ G +  G LG G    + +     +    +     V  V+A
Sbjct: 338 VSAGSYHTMILKNNGTLWATGDNRFGQLGDGTTDDRSIPVQVKDDTDGSGFMTDVAAVAA 397

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKG-----VPCKQVTAG 225
            ENH   + + G ++  G N     G    T+R    P  V+A             V+AG
Sbjct: 398 GENHTMILKKDGTLWATGYNGEGQLGDGTTTDRST--PVQVKASTDPNDFMTDVAAVSAG 455

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +T  L   G +   G N   QLG GD  +R TP     ++ +  V  ++AG  + + +
Sbjct: 456 NEYTMILKKDGTLWATGYNDSSQLGVGDNTNRSTP-----VQVMTGVAAVSAGLEHTMIL 510

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
             +G +++ G  S   LG G   ++  P  +      G  V  VSAG  + + L   G +
Sbjct: 511 KKDGTLWATGWNSAGELGIGNNENKSTPVPVSFM---GSDVAEVSAGSSYTMILKKDGTL 567

Query: 346 YTWGKGYCGALG---HGDEIDKTLPEPLSS------LKSHLAVQVCARKRKTFVLVDTGS 396
           +  G  Y G LG    G   +K+ PE + +        +++A  V A    T +L   G+
Sbjct: 568 WATGFNYYGELGLGTSGSGTNKSTPEQVKASTTPDDFMTNVAA-VSAGSSYTMILKKDGT 626

Query: 397 VYGFGWMGFGSLGFPDRG-VSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           ++  G   +G LG    G V++K    +++  + A     +S G  HT+++   G L+G 
Sbjct: 627 LWATGSNQYGQLGDGTSGAVNNKSTPVQVMTGVAA-----VSAGWSHTMILKKDGTLWGT 681

Query: 456 GDNERAQLG 464
           G N   QLG
Sbjct: 682 GHNVFGQLG 690



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 109/254 (42%), Gaps = 15/254 (5%)

Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE----VGSVV 273
           P + V+AG   T  L   G +   G N  GQLG G T DR  P  +    +    +  V 
Sbjct: 334 PYRAVSAGSYHTMILKNNGTLWATGDNRFGQLGDGTTDDRSIPVQVKDDTDGSGFMTDVA 393

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG---IHVVRVS 330
            +AAG ++ + +  +G +++ G      LG G   D   P  ++           V  VS
Sbjct: 394 AVAAGENHTMILKKDGTLWATGYNGEGQLGDGTTTDRSTPVQVKASTDPNDFMTDVAAVS 453

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
           AG+E+ + L   G ++  G      LG GD  +++ P  + +        V A    T +
Sbjct: 454 AGNEYTMILKKDGTLWATGYNDSSQLGVGDNTNRSTPVQVMT----GVAAVSAGLEHTMI 509

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
           L   G+++  GW   G LG    G ++    P  + S     V+++S G  +T+++   G
Sbjct: 510 LKKDGTLWATGWNSAGELGI---GNNENKSTPVPV-SFMGSDVAEVSAGSSYTMILKKDG 565

Query: 451 RLFGFGDNERAQLG 464
            L+  G N   +LG
Sbjct: 566 TLWATGFNYYGELG 579



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 137/322 (42%), Gaps = 27/322 (8%)

Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQC--VSFTRINFPS--AAHVVQVSA 171
           +  G  HT+++  + ++++ G +  G LG G  T +   V       P+     V  VSA
Sbjct: 395 VAAGENHTMILKKDGTLWATGYNGEGQLGDGTTTDRSTPVQVKASTDPNDFMTDVAAVSA 454

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
              +   + + G ++  G N S   G  D      R   V+ + GV    V+AGL  T  
Sbjct: 455 GNEYTMILKKDGTLWATGYNDSSQLGVGDNTN---RSTPVQVMTGVAA--VSAGLEHTMI 509

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS-VVQIAAGPSYMLAVTGNGV 290
           L   G +   G N+ G+LG G+  ++ TP    P+  +GS V +++AG SY + +  +G 
Sbjct: 510 LKKDGTLWATGWNSAGELGIGNNENKSTP---VPVSFMGSDVAEVSAGSSYTMILKKDGT 566

Query: 291 VYSFGSGSNFCLGHG------EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +++ G      LG G       +    Q +A  T      +V  VSAG  + + L   G 
Sbjct: 567 LWATGFNYYGELGLGTSGSGTNKSTPEQVKASTTPDDFMTNVAAVSAGSSYTMILKKDGT 626

Query: 345 VYTWGKGYCGALGHGDE---IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           ++  G    G LG G      +K+ P  + +        V A    T +L   G+++G G
Sbjct: 627 LWATGSNQYGQLGDGTSGAVNNKSTPVQVMTG----VAAVSAGWSHTMILKKDGTLWGTG 682

Query: 402 WMGFGSLGFPDRGVSDKVLRPR 423
              FG LG  D G +     P 
Sbjct: 683 HNVFGQLGLGDSGSASNRSTPE 704



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 35/281 (12%)

Query: 104 SDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSA 163
           +D+   SAGN+       Y  +L  + ++++ G +    LG G  T +      +     
Sbjct: 447 TDVAAVSAGNE-------YTMILKKDGTLWATGYNDSSQLGVGDNTNRSTPVQVM----- 494

Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG-HRDTNRPIFRPRLVEALKGVPCKQV 222
             V  VSA   H   + + G ++  G NS+   G   + N+    P    +  G    +V
Sbjct: 495 TGVAAVSAGLEHTMILKKDGTLWATGWNSAGELGIGNNENKSTPVPV---SFMGSDVAEV 551

Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT---LDRPTPK----SIAPLEEVGSVVQI 275
           +AG ++T  L   G +   G N +G+LG G +    ++ TP+    S  P + + +V  +
Sbjct: 552 SAGSSYTMILKKDGTLWATGFNYYGELGLGTSGSGTNKSTPEQVKASTTPDDFMTNVAAV 611

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ---HDELQPRAIQTFRRKGIHVVRVSAG 332
           +AG SY + +  +G +++ GS     LG G     +++  P  + T       V  VSAG
Sbjct: 612 SAGSSYTMILKKDGTLWATGSNQYGQLGDGTSGAVNNKSTPVQVMT------GVAAVSAG 665

Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDE---IDKTLPEPL 370
             H + L   G ++  G    G LG GD     +++ PE +
Sbjct: 666 WSHTMILKKDGTLWGTGHNVFGQLGLGDSGSASNRSTPEQV 706


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 126/294 (42%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++  TT         N  +F  G++ CG LG G +    +   R++  S   +  +
Sbjct: 53  SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLSGKKIACL 103

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H       G+VFT G N+    G+  TN  +    +   L      +V  G   
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYH 163

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V   G N  GQ+G G T ++P P+ +    +    V IA G    +AV   
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNT 223

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P P+   K   + +  C     +      G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E L+ +   C   +AG N   + T+   +   G+N  G LG GD      P+
Sbjct: 32  PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90

Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G V+++G  +   LG+G  +  L P  I T  
Sbjct: 91  RLDSLSGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
                V  V+ G  H + L S G V+ WG    G +G G   ++ +P  ++  L++ +AV
Sbjct: 149 LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVAV 208

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +V+TG VY +G+ G G LG    G      R   L  +R   V +++ G
Sbjct: 209 NIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VQRVACG 265

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         P  + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIVEK 307



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 5/242 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
           N   +   + ++F  G N   C G  D    I  PR +++L G  + C    +G +    
Sbjct: 56  NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLSGKKIACLSYGSGPHIV-L 113

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V T G N + QLG+G T     P  I+       V ++A G  + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEV 173

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           +++G  ++  +G G   ++  PR +    +  +  V ++ G    +A+ ++G VY WG  
Sbjct: 174 FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-AVNIACGQMCSMAVVNTGEVYVWGYN 232

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFP 411
             G LG G   ++  P  +++L+     +V      T VL D G VY +G   +G LG  
Sbjct: 233 GNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292

Query: 412 DR 413
           ++
Sbjct: 293 NK 294


>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
          Length = 527

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL + G V+ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG   
Sbjct: 213 LGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269

Query: 468 LRGCLEPTEIFIQE 481
               L P  I +++
Sbjct: 270 KNNLLSPAHIMVEK 283



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
           CCMP526]
          Length = 1021

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 213/491 (43%), Gaps = 57/491 (11%)

Query: 13  LPSHLIFEILTSGRLSAVDLAHLELTSKTFGGSHGLYPQKFRSLVDLAASQLCALHSIYA 72
           LPS  ++   T G+LS+       +    F  +  L P++   L  L    L     +  
Sbjct: 518 LPSPFLYPPATQGKLSSFMTKVFVILVAVFSIAMVLKPEE-EVLPQLFLGSLLITFLVLI 576

Query: 73  GMSRNVQIELLNRCNGNWKRVLRFLQS----VEHSSDIVETSAGNQMQITTGRYHTLLIS 128
            M+R++  + +        R L   Q+    V   + + +++  + +  T+   HT+ + 
Sbjct: 577 LMARHLVTKAMRALLQQRCRRLAVAQAKLRGVPAVARVRQSTTFSTLSATSS--HTI-VP 633

Query: 129 NSSVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHV-----------------VQVS 170
           ++ VF+ G    G LGH P     ++   +   P    +                 V ++
Sbjct: 634 STRVFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNPWGFVDLA 693

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
           A  N++A V + G+++T GD S+   GH D+ +P++RPR VEAL+ V   +V  G   T 
Sbjct: 694 AGLNYSAGVTEDGKLYTWGDGSNHKLGHGDS-KPVYRPRQVEALQDVKIVKVACGDFHTA 752

Query: 231 FLTIRGHVHTCG-----SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA 284
            +   G + T G         G LGHGD  ++P PK +  L + G  V  +A G  + L 
Sbjct: 753 AIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVACGEKHTLI 812

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
           +T +G V + G+G    LG+G   D   P  ++ F  K  ++V V+AG    + L   G 
Sbjct: 813 LTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEK-TNIVEVAAGHAFNLVLTQDGK 871

Query: 345 VYTWGKGYCGALGHGDEID------KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
           ++TWG+   G LG G  I       + +P  + +L+S   V V A    +  + + G +Y
Sbjct: 872 IFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGELY 931

Query: 399 GFGWMGFGSLGFPDRGVSDKV-LRPRILDSLRAHHVSQISTGLYHTVVVT-DRGRLFGFG 456
            +G                K+ L P++        V Q+  G  HT VVT D  +LF FG
Sbjct: 932 MWGM---------------KIHLEPQVFRVGEGDKVWQVGCGGSHTAVVTEDAHQLFTFG 976

Query: 457 DNERAQLGHDT 467
                 LGH T
Sbjct: 977 KGSSLCLGHGT 987



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/348 (22%), Positives = 143/348 (41%), Gaps = 45/348 (12%)

Query: 122  YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
            Y   +  +  +++ G      LGHG ++       ++       +V+V+  + H A + +
Sbjct: 698  YSAGVTEDGKLYTWGDGSNHKLGHG-DSKPVYRPRQVEALQDVKIVKVACGDFHTAAIDE 756

Query: 182  SGQVFTCG------DNSSFCCGHRDTNRPIFRPRLVEALKGVPCK--QVTAGLNFTGFLT 233
             G+++T G                +  +P  RP++V +L    C+   V  G   T  LT
Sbjct: 757  DGRLWTWGWGGSLFGGIGGLGHGDEAEQP--RPKVVRSLVDYGCRVGSVACGEKHTLILT 814

Query: 234  IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
              G V T G+  +G+LG+G + D   P+ +   +E  ++V++AAG ++ L +T +G +++
Sbjct: 815  DDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAFNLVLTQDGKIFT 874

Query: 294  FGSGS------NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
            +G            +       E  P  ++    K   VV V+AG  H  A+   G +Y 
Sbjct: 875  WGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESK--KVVHVAAGHSHSAAVTEEGELYM 932

Query: 348  WG-----KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFG 401
            WG     +     +G GD++                 QV C       V  D   ++ FG
Sbjct: 933  WGMKIHLEPQVFRVGEGDKV----------------WQVGCGGSHTAVVTEDAHQLFTFG 976

Query: 402  WMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTD 448
                  LG   R  +     P+++ D L    V +++ G  H  V+TD
Sbjct: 977  KGSSLCLGHGTRSYTP---HPKLVADGLAGRGVVKVACGHRHMAVITD 1021



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 23/214 (10%)

Query: 291 VYSFGSGSNFCLGHGE--------QHDELQPRAI-----QTFRRKGIH----VVRVSAGD 333
           V+++G G+   LGH           + EL PR +     Q  ++   H     V ++AG 
Sbjct: 637 VFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNPWGFVDLAAGL 696

Query: 334 EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
            +   +   G +YTWG G    LGHGD      P  + +L+    V+V      T  + +
Sbjct: 697 NYSAGVTEDGKLYTWGDGSNHKLGHGDSKPVYRPRQVEALQDVKIVKVACGDFHTAAIDE 756

Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAH--HVSQISTGLYHTVVVTDR 449
            G ++ +GW G    G    G  D+    RP+++ SL  +   V  ++ G  HT+++TD 
Sbjct: 757 DGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDYGCRVGSVACGEKHTLILTDD 816

Query: 450 GRLFGFGDNERAQLGH--DTLRGCLEPTEIFIQE 481
           G +   G+ E  +LG+   +  G  EP E+F ++
Sbjct: 817 GEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEK 850



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 30/235 (12%)

Query: 117  ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
            +  G  HTL++++   V + G+   G LG+G  +   V      F    ++V+V+A    
Sbjct: 803  VACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAF 862

Query: 176  AAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
               + Q G++FT G N     G       D       P LVEAL+      V AG + + 
Sbjct: 863  NLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSA 922

Query: 231  FLTIRGHVHTCGSNTHGQ-----LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
             +T  G ++  G   H +     +G GD                  V Q+  G S+   V
Sbjct: 923  AVTEEGELYMWGMKIHLEPQVFRVGEGD-----------------KVWQVGCGGSHTAVV 965

Query: 286  TGNG-VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
            T +   +++FG GS+ CLGHG +     P+ +      G  VV+V+ G  H+  +
Sbjct: 966  TEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLVAD-GLAGRGVVKVACGHRHMAVI 1019


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 31/298 (10%)

Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
           +  PR  +       + V  GL  T F+   G V+TCG N  GQLGH  +  R  P+ + 
Sbjct: 22  VLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79

Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH--GEQHDELQPRAIQTFRRK 322
            L+   ++V ++ G ++ LA+   G VY++G  S+  LG    E+   +  ++I     K
Sbjct: 80  ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDK 138

Query: 323 GIHVVRVS----------------AGDEHV-----VALDSSGYVYTWGKGYCGALGHGDE 361
            I +                    A D H+     VA+ S+  V+ WG+   G LG G +
Sbjct: 139 NIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAV-SASEVFCWGQNKYGQLGLGID 197

Query: 362 IDK-TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVL 420
             K T P+ + SL     +QV A    +FVL  +G+++G+G   FG LG  D   +D+ +
Sbjct: 198 CKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV 255

Query: 421 RPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
            P +L SLR+  +  I  G  HT  +T  G +F FG     QLGH++    + P ++F
Sbjct: 256 -PYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 312



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 151/358 (42%), Gaps = 40/358 (11%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
           G++  G LG G    + V   R  +F     V  V     H  FVL  G V+TCG N   
Sbjct: 5   GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64

Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG---H 251
             GH  + +   +P  V AL       V+ G   T  L  +G V+  G ++ GQLG    
Sbjct: 65  QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGS 121

Query: 252 GDTLDRPTPKSIAPLEE---VGSVVQIAAGPSYM------------LAVTGNGVVYSFGS 296
            + +  P      P+++   +    + A+  S++            LA +G   V    +
Sbjct: 122 EECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAV---SA 178

Query: 297 GSNFCLGHGEQ---------HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
              FC G  +            +  P+ I++    GI  ++V+AG  H   L  SG ++ 
Sbjct: 179 SEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFG 236

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG+   G LG  DE D+ +P  L SL+S   V +C  +  T  L   G V+ FG  G+G 
Sbjct: 237 WGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQ 296

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
           LG      +   + PR +  L    V+QI+ G  HT   V   GR++ FG     QLG
Sbjct: 297 LG---HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 351



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 139/315 (44%), Gaps = 33/315 (10%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R+   ++ + +V++CG +  G LGH     +      ++   A ++V VS  E H   + 
Sbjct: 44  RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100

Query: 181 QSGQVFTCGDNSSFCCGH-------RDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
             GQV+  G +S    G        R   + IF P + + ++   CK+  +  ++   L 
Sbjct: 101 DKGQVYAWGLDSDGQLGLLGSEECIRVPRKSIFMP-VDKNIRIKECKKTASRKSWVSTLC 159

Query: 234 IR-----------------GHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQI 275
                                V   G N +GQLG G D   + +P+ I  L  +   +Q+
Sbjct: 160 SELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI-PFMQV 218

Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
           AAG ++   +T +G ++ +G      LG  +++D   P  +++ R + I  V +  G++H
Sbjct: 219 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKI--VYICCGEDH 276

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDT 394
             AL   G V+T+G G  G LGH     +  P  +  L   +  Q+ C R+  +  +  +
Sbjct: 277 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSS 336

Query: 395 GSVYGFGWMGFGSLG 409
           G +Y FG  G G LG
Sbjct: 337 GRIYSFGLGGNGQLG 351



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 32/297 (10%)

Query: 98  QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
           +S +    +V   A N + ++ G  HTL +++   V++ G    G LG  G E  +C+  
Sbjct: 70  KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSE--ECIRV 127

Query: 156 TR--INFP------------SAAHVVQVS------ASENHAA----FVLQSGQVFTCGDN 191
            R  I  P            +A+    VS      A ++H A      + + +VF  G N
Sbjct: 128 PRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAVSASEVFCWGQN 187

Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH 251
                G     +    P+L+++L G+P  QV AG   +  LT+ G +   G N  GQLG 
Sbjct: 188 KYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 247

Query: 252 GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDEL 311
            D  DR  P  +  L     +V I  G  +  A+T  G V++FG+G    LGH     E+
Sbjct: 248 NDENDRYVPYLLKSLRS-QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 306

Query: 312 QPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
            PR +  F   G  V +++ G +H  A + SSG +Y++G G  G LG G   ++  P
Sbjct: 307 NPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 361



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 5/193 (2%)

Query: 127 ISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVF 186
           +S S VF  G +  G LG G +  +  S   I        +QV+A   H+  +  SG +F
Sbjct: 176 VSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 235

Query: 187 TCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTH 246
             G N     G  D N   + P L+++L+      +  G + T  LT  G V T G+  +
Sbjct: 236 GWGRNKFGQLGLNDENDR-YVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 294

Query: 247 GQLGHGDTLDRPTPKSIAPLEEVGSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGH 304
           GQLGH  T     P+ +   E +GS+V QIA G  +  A V  +G +YSFG G N  LG 
Sbjct: 295 GQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT 352

Query: 305 GEQHDELQPRAIQ 317
           G   +   P  ++
Sbjct: 353 GSTSNRKSPFTVK 365



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%)

Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           MQ+  G  H+ +++ S ++F  G +  G LG   E  + V +   +  S   +V +   E
Sbjct: 216 MQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQ-KIVYICCGE 274

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFT-GFL 232
           +H A + + G VFT G       GH  T+  I  PR V  L G    Q+  G   T  F+
Sbjct: 275 DHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI-NPRKVFELMGSIVTQIACGRQHTSAFV 333

Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI 263
              G +++ G   +GQLG G T +R +P ++
Sbjct: 334 PSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 364



 Score = 41.6 bits (96), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 400 FGWMGFGSLGFPDRGVSDK-VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
           +G   FG LG    G+ ++ VL PR  D      V  +  GL HTV V D G ++  G N
Sbjct: 4   WGNASFGQLGL--GGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61

Query: 459 ERAQLGHDTLR 469
           +  QLGH+  R
Sbjct: 62  DLGQLGHEKSR 72


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 137/301 (45%), Gaps = 13/301 (4%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           VV +S  + H+A V  +G+++T G N     GH +T +   +P +V+ LK      V  G
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNT-KSYTKPSVVKKLKPEKVYMVACG 95

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
            N T   T  GH+++ G    GQLGHGD  D   PK I  L +V     +A G  +  A+
Sbjct: 96  RNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGL-DVQKYKHLACGSDFSAAI 154

Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYV 345
           T NG +Y++GS      G GE  D   P  +    +    V  VS G  H+  +   G +
Sbjct: 155 TENGELYTWGSCGEGQNGLGE--DTEIPTRLHLHGK----VRMVSCGYYHMAVVTEDGSL 208

Query: 346 YTWGKGYCGALG-HGDEIDKTLP-EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
           Y  G+   G LG   +++D T   + + S++  + V  C  +  T V+   GSVY FG  
Sbjct: 209 YMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEF-TAVVTKNGSVYTFGQG 267

Query: 404 GFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
             G LG     +  +   P  +          +S G   T V+T  G L+ FGD    +L
Sbjct: 268 NQGQLGLGSSMMETEF--PERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHGKL 325

Query: 464 G 464
           G
Sbjct: 326 G 326



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 11/197 (5%)

Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
           +VV ++ G  +   VT NG +Y+FG      LGHG      +P  ++  + + +++  V+
Sbjct: 36  AVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYM--VA 93

Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
            G  H +A   SG++Y++G G  G LGHGD  D  +P+ +  L       +      +  
Sbjct: 94  CGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAA 153

Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-HVSQISTGLYHTVVVTDR 449
           + + G +Y +G  G G  G  +           I   L  H  V  +S G YH  VVT+ 
Sbjct: 154 ITENGELYTWGSCGEGQNGLGE--------DTEIPTRLHLHGKVRMVSCGYYHMAVVTED 205

Query: 450 GRLFGFGDNERAQLGHD 466
           G L+  G+ E  +LG D
Sbjct: 206 GSLYMCGEKEGGKLGLD 222



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 9/174 (5%)

Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
           SG+ F  G     D L  +    F  +   VV +S GDEH   + ++G +YT+G    G 
Sbjct: 11  SGAVFTFGKTRFADNLANK----FWIRDDAVVNLSCGDEHSAVVTANGKLYTFGCNDWGQ 66

Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
           LGHG+    T P  +  LK      V   +  T    ++G +Y FG  G G LG  D   
Sbjct: 67  LGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQLGHGD--- 123

Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ--LGHDT 467
           ++    P+I++ L       ++ G   +  +T+ G L+ +G     Q  LG DT
Sbjct: 124 AEDSHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDT 177



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 119/305 (39%), Gaps = 54/305 (17%)

Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
           + ++ G  H+ +++ N  +++ G +  G LGHG  T      + +       V  V+   
Sbjct: 38  VNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHG-NTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
           NH     +SG +++ G       GH D       P+++E L     K +  G +F+  +T
Sbjct: 97  NHTIAATESGHLYSFGCGGDGQLGHGDAEDS-HVPKIIEGLDVQKYKHLACGSDFSAAIT 155

Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTP--------------------------------- 260
             G ++T GS   GQ G G+  + PT                                  
Sbjct: 156 ENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGKVRMVSCGYYHMAVVTEDGSLYMCGEKE 215

Query: 261 -----------KSIAPLEEVGS----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG 305
                       + + L+++ S    VV  A G  +   VT NG VY+FG G+   LG G
Sbjct: 216 GGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLG 275

Query: 306 EQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
               E + P  I  F +  +    VS G+     +   G +YT+G G  G LG GDE   
Sbjct: 276 SSMMETEFPERIPLFEK--VKARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFS 333

Query: 365 TLPEP 369
              +P
Sbjct: 334 NTFKP 338



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 19/214 (8%)

Query: 122 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH----VVQVSASENHAA 177
           +   +  N  +++ GS   G  G G +T           P+  H    V  VS    H A
Sbjct: 150 FSAAITENGELYTWGSCGEGQNGLGEDT---------EIPTRLHLHGKVRMVSCGYYHMA 200

Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTA--GLNFTGFLTIR 235
            V + G ++ CG+      G    +  +     ++ +K +  + V A  G  FT  +T  
Sbjct: 201 VVTEDGSLYMCGEKEGGKLGL--DHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKN 258

Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
           G V+T G    GQLG G ++         PL E      ++ G S+   +T +G +Y+FG
Sbjct: 259 GSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFG 318

Query: 296 SGSNFCLGHGEQ--HDELQPRAIQTFRRKGIHVV 327
            G +  LG G++   +  +P  ++ F    + +V
Sbjct: 319 DGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMV 352


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 132/304 (43%), Gaps = 13/304 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++   T         N  VF  G +  G LG G +    +   R++      +  +
Sbjct: 29  SAGNEVLYAT--------ENDEVFVLGMNCSGCLGTG-DMQSTIEPRRLDSLCGKKIACL 79

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H     + G+V+T G N+    G+  TN      ++   L      +V  G + 
Sbjct: 80  SYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHH 139

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V+T G N  GQ+G G T ++P P+ +    +   VV IA G    +AV  N
Sbjct: 140 SMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVEN 199

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G +Y W
Sbjct: 200 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAW 257

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G    G LG G++ +++ P  +   K   + +  C     +     +G VY +G     S
Sbjct: 258 GANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQCRGQS 317

Query: 408 LGFP 411
           + FP
Sbjct: 318 VTFP 321



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E +K +   C   +AG N   + T    V   G N  G LG GD      P+
Sbjct: 8   PIFSLCSPEEIKLIRQACVFGSAG-NEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPR 66

Query: 262 SIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G VY++G  +   LG+G  +    P  + T  
Sbjct: 67  RLDSLCGKKIACLSYGSGPHVVLA-TEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVST-N 124

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 379
                V+ V+ G  H + L S G VYTWG    G +G G   ++ +P  ++S L++ + V
Sbjct: 125 LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVV 184

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +V+ G VY +G+ G G LG    G      R   L  +R   V +++ G
Sbjct: 185 NIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VQRVACG 241

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + + +
Sbjct: 242 YAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDK 283


>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Ornithorhynchus anatinus]
          Length = 531

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 9/254 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTHSDEVFVFGVNCSNCLGTGDNQSTIVPKKLELLSGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G+VY++G      LG+G  +  + P  I T       V  V+ G  H +AL   G VY W
Sbjct: 94  GIVYAWGHNGYSQLGNGTTNQGIAPIQICT-NLMIKQVTEVACGSHHSMALADDGEVYAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  + G     L P  + +L +  V QI  G  HT+ +TD G L+ +G N   QLG   
Sbjct: 213 LGLGNNG---NQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269

Query: 468 LRGCLEPTEIFIQE 481
               L P +I +++
Sbjct: 270 KSNLLSPAQIMVEK 283



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 12/255 (4%)

Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
           S N A +V  S +VF  G N S C G  D N+    P+ +E L G   K ++ G      
Sbjct: 30  SANEAIYVTHSDEVFVFGVNCSNCLGTGD-NQSTIVPKKLELLSGKKIKSLSYGSGPHVL 88

Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
           L+   G V+  G N + QLG+G T     P  I     +  V ++A G  + +A+  +G 
Sbjct: 89  LSTEDGIVYAWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGE 148

Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
           VY++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  +G VY 
Sbjct: 149 VYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVSIACGQTSSMAVLDNGEVYG 204

Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           WG    G LG G+  ++  P  +++L S   +Q+      T  L D G +Y +G   +G 
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 408 LGFPDRGVSDKVLRP 422
           LG    G    +L P
Sbjct: 265 LG---TGNKSNLLSP 276



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 115/272 (42%), Gaps = 5/272 (1%)

Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHAAFVLQSGQVFTCGD 190
           VF  G +    LG G   +  V   ++   S   +  +S  S  H     + G V+  G 
Sbjct: 43  VFVFGVNCSNCLGTGDNQSTIVP-KKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGH 101

Query: 191 NSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG 250
           N     G+  TN+ I   ++   L      +V  G + +  L   G V+  G N  GQ+G
Sbjct: 102 NGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVG 161

Query: 251 HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE 310
            G T ++PTP+ +     +  VV IA G +  +AV  NG VY +G   N  LG G   ++
Sbjct: 162 SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ 221

Query: 311 LQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPL 370
           L P  +       + V+++  G  H +AL   G +Y WG    G LG G++ +   P  +
Sbjct: 222 LTPCRVAALH--SVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNLLSPAQI 279

Query: 371 SSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
              K  +  +  C     +      G VY +G
Sbjct: 280 MVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 6/183 (3%)

Query: 116 QITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
           ++  G +H++ L  +  V++ G + CG +G G    Q       N      VV ++  + 
Sbjct: 132 EVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQT 191

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
            +  VL +G+V+  G N +   G    N     P  V AL  V   Q+  G   T  LT 
Sbjct: 192 SSMAVLDNGEVYGWGYNGNGQLG-LGNNGNQLTPCRVAALHSVCVLQIVCGYAHTLALTD 250

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVVY 292
            G ++  G+NT+GQLG G+  +  +P  I  + E   VV+IAA  S     A T  G VY
Sbjct: 251 EGLLYAWGANTYGQLGTGNKSNLLSPAQI--MVEKERVVEIAACHSAHTSAAKTQGGHVY 308

Query: 293 SFG 295
            +G
Sbjct: 309 MWG 311


>gi|222136641|ref|NP_149107.4| serine/threonine-protein kinase Nek9 [Homo sapiens]
 gi|116242675|sp|Q8TD19.2|NEK9_HUMAN RecName: Full=Serine/threonine-protein kinase Nek9; AltName:
           Full=Nercc1 kinase; AltName: Full=Never in mitosis
           A-related kinase 9; Short=NimA-related protein kinase 9;
           AltName: Full=NimA-related kinase 8; Short=Nek8
 gi|62740023|gb|AAH93881.1| NIMA (never in mitosis gene a)- related kinase 9 [Homo sapiens]
 gi|85567549|gb|AAI12102.1| NIMA related kinase 9 [Homo sapiens]
          Length = 979

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
           P+ ++ +K G   +QV AG      +T+   ++T      G+  HGQLGHGD      PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418

Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
            +  L+   ++ Q++ G  + + VT  G +Y+FGS    C+G  +    + L+P  +  F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477

Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
               +   +VS GD HVV L  +  VY+WG G  G LG   E D   P+ +   K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 429
            V      TF+L  +G V   G   F  LG      G+ +      +           L 
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595

Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
            + +  I+ G  HT  + +RGRL  FG N+  QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)

Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
           Q++ G   T+ +++   +++ GS   G +G     GPE  + +   ++NF  +  V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486

Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
             +NH   + ++ +V++ G      CG       D+    + P+ V+  K +    V  G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540

Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 273
            + T  LT  G V  CG N   +LG          H    + P   S    +++    + 
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600

Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
            IA G ++  A+   G + +FG      LG G     L    +      G  V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659

Query: 334 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
           E  +A     +++ WG G  G L        HG +I  + P P+     H+    C R  
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718

Query: 387 KTFVLVD 393
            T ++V+
Sbjct: 719 HTILIVE 725



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
           + G    +V AG+ H   +     +YTW     G    G LGHGD+     P+ +  L+ 
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425

Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
               QV      T  + D G +Y FG   +G +G  D+    +VL P  L+   ++ V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484

Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
           +S G  H VV+T    ++ +G  E  +LG D+      P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)

Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
           R  T+  +  +V +  +S   V G G  T Q +   +    S     QV A   H A V 
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385

Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
              +++T      G       GH D  +  +R P+ VE L+G   +QV+ G +FT  +T 
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 289
            G ++  GS+ +G +G    +D+   P+ + P++        V Q++ G ++++ +T N 
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499

Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
            VYS+G G    LG   + D   P+ +     K + +V V  G +    L  SG V   G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557

Query: 350 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 396
                 LG               E+  T    L+   S   ++  A  K  T  + + G 
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617

Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
           +  FG    G LG    G   K L   +L   L    V ++S G   T+  TD   +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674

Query: 456 GDNERAQLGHDTLRGCLEPTE 476
           G+    +L        + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)

Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
           G+ L G LGHG + +       +       + QVS  ++    V   GQ++  G +   C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457

Query: 196 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
            G      P +  P  +      P +QV+ G N    LT    V++ G   +G+LG    
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517

Query: 255 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 305
            D  TP+ +  P   +   VQ     +++L  +G  +          G N C+     H 
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577

Query: 306 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
             H+     +    ++   + +R ++ G  H  A+D  G + T+G   CG LG G+   +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637

Query: 365 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 417
                L   L     ++V      T    D   ++ +G  G G L            +  
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697

Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
              RP I  SL  HHV  +S   +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 394
            V    +  VY WG G            K+ P+ L  +KS   A QVCA      V+   
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387

Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
             +Y +  M  G+      G  DK    +P+ ++ L+   + Q+S G   TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQL 447

Query: 453 FGFGDNERAQLGHDTLRG--CLEPTEI 477
           + FG +    +G D + G   LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474


>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
 gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
 gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
 gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Homo sapiens]
          Length = 531

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)

Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
           ++T    V   G N    LG GD      PK +  L  +++ S+    +GP  +L+ T +
Sbjct: 36  YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           GVVY++G      LG+G  +  + P  + T       VV V+ G  H +AL + G V+ W
Sbjct: 94  GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAW 152

Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
           G   CG +G G   ++  P  +++ L     V +   +  +  ++D G VYG+G+ G G 
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212

Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
           LG  + G     L P  + +L +  V+QI  G  HT+ +TD G L+ +G N   QLG   
Sbjct: 213 LGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269

Query: 468 LRGCLEPTEIFIQE 481
               L P  I +++
Sbjct: 270 KNNLLSPAHIMVEK 283



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 14/261 (5%)

Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
           V   SASE  A +V  + +VF  G N S C G  D N+    P+ +E L G   K ++ G
Sbjct: 26  VFGTSASE--ALYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEGLCGKKIKSLSYG 82

Query: 226 LNFTGFLTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
                 L+   G V+  G N + QLG+G T     P  +     +  VV++A G  + +A
Sbjct: 83  SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMA 142

Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQT---FRRKGIHVVRVSAGDEHVVALDS 341
           +  +G V+++G  +   +G G   ++  PR +      +R    VV ++ G    +A+  
Sbjct: 143 LAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR----VVGIACGQTSSMAVLD 198

Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
           +G VY WG    G LG G+  ++  P  +++L S    Q+      T  L D G +Y +G
Sbjct: 199 NGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWG 258

Query: 402 WMGFGSLGFPDRGVSDKVLRP 422
              +G LG    G  + +L P
Sbjct: 259 ANTYGQLG---TGNKNNLLSP 276



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)

Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
           H     + G V+  G N     G+  TN+ I   ++   L      +V  G + +  L  
Sbjct: 86  HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145

Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
            G V   G N  GQ+G G T ++PTP+ +     +  VV IA G +  +AV  NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205

Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
           G   N  LG G   ++L P  +       + V ++  G  H +AL   G +Y WG    G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263

Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
            LG G++ +   P  +   K  +  +  C     +      G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 130/294 (44%), Gaps = 13/294 (4%)

Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
           SAGN++   T         N  VF  G +  G LG G +    +   R++      +  +
Sbjct: 70  SAGNEVLYVT--------ENDEVFVLGMNCSGCLGTG-DVQSTIEPKRLDSLCGKKIACL 120

Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
           S  S  H     + G+V+T G N+    G+  TN  +   ++   L      +V  G + 
Sbjct: 121 SYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHH 180

Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
           +  LT  G V+T G N  GQ+G G T ++P P+ +    +   VV IA G    +AV  N
Sbjct: 181 SMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVEN 240

Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
           G VY +G   N  LG G   +  QP   +    +GI V RV+ G  H + L   G +Y W
Sbjct: 241 GEVYVWGYNGNGQLGLGSSGN--QPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAW 298

Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
           G    G LG G++ +++ P  ++  K   + +  C     +     +G VY +G
Sbjct: 299 GANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 352



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 132/282 (46%), Gaps = 10/282 (3%)

Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
           PIF     E LK +   C   +AG N   ++T    V   G N  G LG GD      PK
Sbjct: 49  PIFSLCSQEELKLIRQACVFGSAG-NEVLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPK 107

Query: 262 SIAPL-EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
            +  L  +  + +   +GP  +LA T  G VY++G  +   LG+G  +  L P  + T  
Sbjct: 108 RLDSLCGKKIACLSYGSGPHVVLA-TEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVST-N 165

Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS-LKSHLAV 379
                V+ V+ G  H + L S G VYTWG    G +G G   ++ +P  ++S L++ + V
Sbjct: 166 LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVV 225

Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
            +   +  +  +V+ G VY +G+ G G LG    G      R   L  +R   V +++ G
Sbjct: 226 NIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR---VQRVACG 282

Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
             HT+V+TD G+++ +G N   QLG         PT + + +
Sbjct: 283 CAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVDK 324



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 5/238 (2%)

Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--KGVPCKQVTAGLNFTGF 231
           N   +V ++ +VF  G N S C G  D    I  P+ +++L  K + C    +G +    
Sbjct: 73  NEVLYVTENDEVFVLGMNCSGCLGTGDVQSTI-EPKRLDSLCGKKIACLSYGSGPHVV-L 130

Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
            T  G V+T G N + QLG+G T     P  ++       V+++A G  + + +T +G V
Sbjct: 131 ATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEV 190

Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
           Y++G  ++  +G G   ++  PR + +  +  + VV ++ G    +A+  +G VY WG  
Sbjct: 191 YTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKV-VVNIACGQMCSMAVVENGEVYVWGYN 249

Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
             G LG G   ++  P  +++L+     +V      T VL D G +Y +G   +G LG
Sbjct: 250 GNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLG 307


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.137    0.417 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,843,308,245
Number of Sequences: 23463169
Number of extensions: 335719039
Number of successful extensions: 798654
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3513
Number of HSP's successfully gapped in prelim test: 1776
Number of HSP's that attempted gapping in prelim test: 704929
Number of HSP's gapped (non-prelim): 31495
length of query: 489
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 342
effective length of database: 8,910,109,524
effective search space: 3047257457208
effective search space used: 3047257457208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)