BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011268
(489 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 180/366 (49%), Gaps = 10/366 (2%)
Query: 101 EHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 159
+ ++D V + I+ G H++ L+S V S G G LGHG + S T+++
Sbjct: 4 DMAADEVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHG-DAEDRPSPTQLS 62
Query: 160 FPSAAHVVQVSASENHAAFVLQSG-QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
+V V+ +H QSG +V++ G GH +++ +F P ++AL G+
Sbjct: 63 ALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSD-LFTPLPIKALHGIR 121
Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAG 278
KQ+ G + +T+ G V + G N +GQLG GDT D P+ I E + + +AAG
Sbjct: 122 IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGI-RIKMVAAG 180
Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
+ AVT +G +Y +G G LG G++ D L P + + G + V+ G H ++
Sbjct: 181 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTS--TGGEKMSMVACGWRHTIS 238
Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
+ SG +YT+G G LGHGD D +P L +L + Q+ R T L G +Y
Sbjct: 239 VSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLY 298
Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
G+GW FG +G + ++ R D + V Q+S G HT+ VT+R +F +G
Sbjct: 299 GWGWNKFGQVGVGNNLDQCSPVQVRFPDDQK---VVQVSCGWRHTLAVTERNNVFAWGRG 355
Query: 459 ERAQLG 464
QLG
Sbjct: 356 TNGQLG 361
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)
Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSY 281
++AG + + L V + G GQLGHGD DRP+P ++ L+ +V + G +
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGH-QIVSVTCGADH 78
Query: 282 MLAVTGNGV-VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
+A + +G+ VYS+G G LGHG D P I+ GI + +++ GD H +A+
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH--GIRIKQIACGDSHCLAVT 136
Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGF 400
G V +WG+ G LG GD D +P+ + + + V A T + + G +YG+
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 196
Query: 401 GWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
GW +G+LG DR +D+++ R+ S +S ++ G HT+ V+ G L+ +G ++
Sbjct: 197 GWGRYGNLGLGDR--TDRLVPERVT-STGGEKMSMVACGWRHTISVSYSGALYTYGWSKY 253
Query: 461 AQLGHDTLRGCLEPTEI 477
QLGH L L P ++
Sbjct: 254 GQLGHGDLEDHLIPHKL 270
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 8/260 (3%)
Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
QI G H L ++ V S G + G LG G +T + +I + V+A
Sbjct: 124 QIACGDSHCLAVTMEGEVQSWGRNQNGQLGLG-DTEDSLVPQKIQAFEGIRIKMVAAGAE 182
Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRD-TNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
H A V + G ++ G G D T+R + P V + G V G T ++
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLV--PERVTSTGGEKMSMVACGWRHTISVS 240
Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
G ++T G + +GQLGHGD D P + L + QI+ G + +A+T +G +Y
Sbjct: 241 YSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSN-SFISQISGGWRHTMALTSDGKLYG 299
Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
+G +G G D+ P +Q VV+VS G H +A+ V+ WG+G
Sbjct: 300 WGWNKFGQVGVGNNLDQCSP--VQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTN 357
Query: 354 GALGHGDEIDKTLPEPLSSL 373
G LG G+ +D+ P+ + +L
Sbjct: 358 GQLGIGESVDRNFPKIIEAL 377
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 4/208 (1%)
Query: 117 ITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
+ G HT ++ + ++ G G LG G T + V R+ + V+ H
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP-ERVTSTGGEKMSMVACGWRH 235
Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
V SG ++T G + GH D + P +EAL Q++ G T LT
Sbjct: 236 TISVSYSGALYTYGWSKYGQLGHGDLEDHLI-PHKLEALSNSFISQISGGWRHTMALTSD 294
Query: 236 GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
G ++ G N GQ+G G+ LD+ +P + + VVQ++ G + LAVT V+++G
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQKVVQVSCGWRHTLAVTERNNVFAWG 353
Query: 296 SGSNFCLGHGEQHDELQPRAIQTFRRKG 323
G+N LG GE D P+ I+ G
Sbjct: 354 RGTNGQLGIGESVDRNFPKIIEALSVDG 381
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 10/173 (5%)
Query: 107 VETSAGNQMQITT-GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA 164
V ++ G +M + G HT+ +S S ++++ G S G LGHG + ++ S +
Sbjct: 218 VTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPH-KLEALSNS 276
Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG---HRDTNRPIFRPRLVEALKGVPCKQ 221
+ Q+S H + G+++ G N G + D P+ + R + K V Q
Sbjct: 277 FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPV-QVRFPDDQKVV---Q 332
Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
V+ G T +T R +V G T+GQLG G+++DR PK I L G+ Q
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGASGQ 385
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 147/301 (48%), Gaps = 29/301 (9%)
Query: 194 FCCGHRDTNRP---------IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
C G+ +P + P++ + K+V G N + FL G V+TCG N
Sbjct: 2 LCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLN 61
Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGS-----VVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
T GQLGH ++P E++G+ ++ +A G S+ LA++ G ++S+G+GS+
Sbjct: 62 TKGQLGHEREGNKP--------EQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
Query: 300 FCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
LG D + PR IQ ++ I ++VS G+ H +AL + G +TWGK G LG
Sbjct: 114 GQLGLMTTEDSVAVPRLIQKLNQQTI--LQVSCGNWHCLALAADGQFFTWGKNSHGQLGL 171
Query: 359 GDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
G E + P+ + SL+ QV A +F L +G+V+G+G G LG D +
Sbjct: 172 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231
Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
P + LR V IS G HT V+T G +F FG QLGHD++ + P +
Sbjct: 232 S---PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288
Query: 478 F 478
Sbjct: 289 L 289
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 14/309 (4%)
Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH-RDTNRPIFRPRLVEALKGVP 218
F S V +V+ NH+ F+L+ G+V+TCG N+ GH R+ N+P + AL
Sbjct: 30 FISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP----EQIGALADQH 85
Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAA 277
V G + + L+ RG + + G+ + GQLG T D P+ I L + +++Q++
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQ-QTILQVSC 144
Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHV 336
G + LA+ +G +++G S+ LG G++ + P+ +++ +GI + +V+AG H
Sbjct: 145 GNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHS 202
Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGS 396
AL SG V+ WG G LG DE D+ P + L++ V + + T VL +G
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG 262
Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFGF 455
V+ FG G LG ++D+V PR + L V+QI+ G HT+ V G ++ F
Sbjct: 263 VFTFGAGSCGQLG--HDSMNDEV-NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 456 GDNERAQLG 464
G R QLG
Sbjct: 320 GCGARGQLG 328
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)
Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
G + L+ + V++CG + G LGH E + +I + H++ V+ E+H+ +
Sbjct: 43 GNHSVFLLEDGEVYTCGLNTKGQLGHEREGNKP---EQIGALADQHIIHVACGESHSLAL 99
Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
GQ+F+ G S G T + PRL++ L QV+ G L G
Sbjct: 100 SDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFF 159
Query: 240 TCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
T G N+HGQLG G + +P+ + LE + + Q+AAG ++ A++ +G V+ +G +
Sbjct: 160 TWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFALSLSGAVFGWGMNN 218
Query: 299 NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
LG ++ D P ++ R + VV +S G+EH L SG V+T+G G CG LGH
Sbjct: 219 AGQLGLSDEKDRESPCHVKLLRTQ--KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH 276
Query: 359 GDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD 417
D+ P + L Q+ C R+ + +G +Y FG G LG G +
Sbjct: 277 DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG---TGHTC 333
Query: 418 KVLRPRILDSLRAHHVSQIS 437
V P + A H Q+S
Sbjct: 334 NVKCPSPVKGYWAAHSGQLS 353
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 22/295 (7%)
Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR-INFPSAAHVVQVSAS 172
+ + G H+L +S+ +FS G+ G LG T V+ R I + ++QVS
Sbjct: 87 IHVACGESHSLALSDRGQLFSWGAGSDGQLGLM-TTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL 232
H + GQ FT G NS G P+ V +L+G+P QV AG + L
Sbjct: 146 NWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL 205
Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
++ G V G N GQLG D DR +P + L VV I+ G + +T +G V+
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA-LDSSGYVYTWGKG 351
+FG+GS LGH +DE+ PR + G V +++ G +H +A + SSG +Y +G G
Sbjct: 265 TFGAGSCGQLGHDSMNDEVNPRRV--LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
Query: 352 YCGALGHGDEIDKTLPEPLS---------------SLKSHLAVQVCARKRKTFVL 391
G LG G + P P+ K H+ Q+ + +TFVL
Sbjct: 323 ARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVL 377
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 159/328 (48%), Gaps = 16/328 (4%)
Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
SA +VVQV+ V G+V++CG+ N G PI PR + AL
Sbjct: 2991 SALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI--PRQITALSSYVV 3048
Query: 220 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 3049 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3107
Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3108 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3165
Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3166 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3225
Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3226 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3282
Query: 456 GDNERAQLGHDTLRGCLEPTEIFIQEME 483
GDN+ Q G+ T +PT +Q +E
Sbjct: 3283 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3308
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 141/286 (49%), Gaps = 10/286 (3%)
Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
+VF G N G ++ I P E L + QV G +T+ G V++CG
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019
Query: 244 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079
Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
LGH + + +PR I+ + K I ++ G H AL SSG +YTWG G G LGHGD
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3137
Query: 362 IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
+ P+ + L H +QV +R +T L D G V+ +G FG LG RG S+
Sbjct: 3138 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3194
Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
P+ ++ L V QI G ++ +T G ++ +G + +LGH
Sbjct: 3195 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)
Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
V V++ H + G+V++ G+ GH + + P RPR++E+L+G+ V AG
Sbjct: 4044 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4102
Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
+ +T G ++T G +G+LGH D+ D+ PK + L+ V+ IA +G + L
Sbjct: 4103 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVIDIACGSGDAQTLC 4161
Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
+T + V+S+G G LG G P I + G+ VV+V G + VAL SG
Sbjct: 4162 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4219
Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
VYTWGKG LGHG + P + L+ + + + G VY +G
Sbjct: 4220 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4279
Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
G LG G ++ + RPR++ +L+ V++++ G HT+
Sbjct: 4280 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)
Query: 208 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
P L+E+++ V K+V +G L+ G V++ G G+LGHG+ P+ I
Sbjct: 4030 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4089
Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
L + VV +AAG ++ VT G +Y++G G LGH + D+L+P+ ++ + +
Sbjct: 4090 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148
Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
+ +GD + L V++WG G G LG G +P + SL V+V
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4208
Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
+ + L +G+VY +G + LG G D V RPR + L+ V I+TG H V
Sbjct: 4209 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
T+ G ++ +GDN+ QLG T P
Sbjct: 4266 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4294
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 151/311 (48%), Gaps = 24/311 (7%)
Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
V+QV+ +E + ++G+V+T NS + P+LV+ L ++ A
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQAYNSD-----------MLAPQLVQGLASRNIVKIAAH 502
Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562
Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 620
Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
+ +G V++WG G G LG G P+ + L+ ++V + + L G VY
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVY 680
Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 681 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737
Query: 459 ERAQLGHDTLR 469
++ Q DTLR
Sbjct: 738 DQCQ-HFDTLR 747
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)
Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
++ + +G H L +S+ V+S G + G LGHG + C I VV V+A
Sbjct: 4042 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4100
Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
H+A V +G ++T G GH D+ + +P+LVEAL+G + +G T
Sbjct: 4101 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVIDIACGSGDAQT 4159
Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
LT V + G +G+LG G + P I L +G VV++ G + +A+T +G
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4218
Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
VY++G G LGHG +PR +Q +G V+ ++ G H V G VYTWG
Sbjct: 4219 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 350 KGYCGALGHG 359
G LG G
Sbjct: 4277 DNDEGQLGDG 4286
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)
Query: 236 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4009
Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4010 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4069
Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 4070 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4129
Query: 413 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
S+ L+P+++++L+ H V I+ +G T+ +TD ++ +GD + +LG G
Sbjct: 4130 ---SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4186
Query: 471 CLEPTEI 477
C P +I
Sbjct: 4187 CKVPMKI 4193
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3057 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3115
Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3116 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
F LGHG +P+ ++ R G +V V+ G H +A+ SG VY WG G G
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3291
Query: 358 HG 359
+G
Sbjct: 3292 NG 3293
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 19/261 (7%)
Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHVVQVS 170
+ G ++ L + V+S G G LGHG P+ S + + HVV ++
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----AGKHVVHIA 558
Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
++A + G+++T G + GH + P LV LKG+ V G
Sbjct: 559 CGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQ 617
Query: 231 FLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
L + G V + G +G+LG G + TPK I L+++ V+++ G + +A+T +
Sbjct: 618 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVIKVRCGSQFSIALTKD 676
Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
G VYS+G G N LGHG + P+ ++ +G V+ V+AG H +AL V++W
Sbjct: 677 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 349 GKGYCGALGHGDEIDKTLPEP 369
G H D + T PEP
Sbjct: 735 GSN--DQCQHFDTLRVTKPEP 753
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3105 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3163
Query: 176 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3164 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222
Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3281
Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3282 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3324
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 119 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
+G TL L + +V+S G G LG G + C +I+ + VV+V +
Sbjct: 4154 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4212
Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
+ +SG V+T G GH + + RPR V+ L+G + G T G
Sbjct: 4213 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4271
Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
V+T G N GQLG G T P+ +A L+ V ++A G ++ LA
Sbjct: 4272 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4317
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3944 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
G +Y G+G+ G G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4004 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
++ +G+ E +LGH C P I
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4087
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 345 VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
V+ WG LG G +I + E LS+L VQV + F + G VY G
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYSCG 3018
Query: 402 WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
G LG G+S V PR + +L ++ V +++ +G H +T G++F +G+
Sbjct: 3019 EATNGRLGL---GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075
Query: 459 ERAQLGHDTLRGCLEPTEI 477
+ +LGH + C +P I
Sbjct: 3076 DDGKLGHFSRMNCDKPRLI 3094
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)
Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
L+ ++V ++ G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136
Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
I +V+V+ G H +AL + V+ WG+ G LG G E K T P+ + SL +QV
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVA 196
Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
A +FVL +G+++G+G FG LG D +D+ + P +L SLR+ + I G H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253
Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
T +T G +F FG QLGH++ + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 13/333 (3%)
Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGD 253
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGS 121
Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQ 312
P++I L ++ +VQ+A G + LA++ V+ +G LG G E +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTS 180
Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
P+ I++ GI ++V+AG H L SG ++ WG+ G LG DE D+ +P L S
Sbjct: 181 PQLIKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
L+S V +C + T L G V+ FG G+G LG + + PR + L
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295
Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
V+QI+ G HT V GR++ FG QLG
Sbjct: 296 VTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 8/291 (2%)
Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
R+ ++ + +V++CG + G LGH + ++ A ++V VS E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100
Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 241 CGSNTHGQLGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
G N +GQLG G + T P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
LG +++D P +++ R + I V + G++H AL G V+T+G G G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
+ P + L + Q+ C R+ + + +G +Y FG G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 9/274 (3%)
Query: 98 QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
+S + +V A N + ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127
Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSL 187
Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246
Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
I G + A+T G V++FG+G LGH E+ PR + F G V +++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQIACGRQ 304
Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 12/230 (5%)
Query: 91 KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
+ +R ++++ SDI +Q+ G YH+L +S +S VF G + G LG G E
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIEC 175
Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
+ S I +QV+A H+ + SG +F G N G D N + P
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234
Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
L+++L+ + G + T LT G V T G+ +GQLGH T P+ + E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292
Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
GS+V QIA G + A V +G +YSFG G N LG G + P ++
Sbjct: 293 GSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)
Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG-HGEQHDELQPRAIQTFRRKG 323
L+ ++V +A G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 ALD-AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSL--SD 136
Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
I +V+V+ G H +AL + V+ WG+ G LG G + K T P+ + SL +QV
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVA 196
Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
A +FVL +G+++G+G FG LG D +D+ + P +L SLR+ + I G H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253
Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
T +T G +F FG QLGH++ + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 144/311 (46%), Gaps = 12/311 (3%)
Query: 157 RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG 216
R +F V V H FVL G V+TCG N GH + + +P V AL
Sbjct: 27 RSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKSRK---KPEQVVALDA 83
Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG-HGDTLDRPTPKSIAPLEEVGSVVQI 275
V G T L +G V+ G ++ GQLG G P++I L ++ +VQ+
Sbjct: 84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI-QIVQV 142
Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
A G + LA++ V+ +G LG G + + P+ I++ GI ++V+AG
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL--GIPFMQVAAGGA 200
Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
H L SG ++ WG+ G LG DE D+ +P L SL+S V +C + T L
Sbjct: 201 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKE 260
Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT-VVVTDRGRLF 453
G V+ FG G+G LG + + PR + L V+Q++ G HT V GR++
Sbjct: 261 GGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317
Query: 454 GFGDNERAQLG 464
FG QLG
Sbjct: 318 SFGLGGNGQLG 328
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)
Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
R+ ++ + +V++CG + G LGH + ++ A ++V V+ E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVACGEAHTLALN 100
Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
GQV+ G +S G + + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
G N +GQLG G D + +P+ I L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
LG +++D P +++ R + I V + G++H AL G V+T+G G G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
+ P + L + QV C R+ + + +G +Y FG G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 9/274 (3%)
Query: 98 QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSF 155
+S + +V A N + + G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRV 127
Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSL 187
Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246
Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
I G + A+T G V++FG+G LGH E+ PR + F G V +V+ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTQVACGRQ 304
Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)
Query: 91 KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
+ +R ++++ SDI +Q+ G YH+L +S +S VF G + G LG G +
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDC 175
Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
+ S I +QV+A H+ + SG +F G N G D N + P
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234
Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
L+++L+ + G + T LT G V T G+ +GQLGH T P+ + E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292
Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
GS+V Q+A G + A V +G +YSFG G N LG G + P ++
Sbjct: 293 GSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 158/328 (48%), Gaps = 16/328 (4%)
Query: 162 SAAHVVQVSASENHAAFVLQSGQVFTCGD--NSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
SA +VVQV+ V G+V+ CG+ N G PI PR + AL
Sbjct: 2990 SALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPI--PRQITALSSYVV 3047
Query: 220 KQVT--AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAA 277
K+V +G LT+ G V + G G+LGH ++ P+ I L+ + IA
Sbjct: 3048 KKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALK-TKRIRDIAC 3106
Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEH 335
G S+ A+T +G +Y++G G LGHG+ +L+P+ ++ G V++V+ G D
Sbjct: 3107 GSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL--GHRVIQVACGSRDAQ 3164
Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
+AL G V++WG G G LG G +P+ + L Q+ + + L +G
Sbjct: 3165 TLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 3224
Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
V+ +G + LG G V +P++++ LR + ++ G H + VTD G+++ +
Sbjct: 3225 VVWTWGKGDYFRLG---HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281
Query: 456 GDNERAQLGHDTLRGCLEPTEIFIQEME 483
GDN+ Q G+ T +PT +Q +E
Sbjct: 3282 GDNDHGQQGNGTTTVNRKPT--LVQGLE 3307
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 140/286 (48%), Gaps = 10/286 (3%)
Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
+VF G N G ++ I P E L + QV G +T+ G V+ CG
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3018
Query: 244 NTHGQLGHG-DTLDRPTPKSIAPLEE-VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFC 301
T+G+LG G + P P+ I L V V + +G + A+T +G V+S+G G +
Sbjct: 3019 ATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3078
Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
LGH + + +PR I+ + K I ++ G H AL SSG +YTWG G G LGHGD
Sbjct: 3079 LGHFSRMNCDKPRLIEALKTKRIR--DIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3136
Query: 362 IDKTLPEPLSSLKSHLAVQVC--ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
+ P+ + L H +QV +R +T L D G V+ +G FG LG RG S+
Sbjct: 3137 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG---RGGSEGC 3193
Query: 420 LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
P+ ++ L V QI G ++ +T G ++ +G + +LGH
Sbjct: 3194 NIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3239
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 9/280 (3%)
Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
V V++ H + G+V++ G+ GH + + P RPR++E+L+G+ V AG
Sbjct: 4042 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRS-PCDRPRVIESLRGIEVVDVAAGG 4100
Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA--AGPSYMLA 284
+ +T G ++T G +G+LGH D+ D+ PK + L+ VV IA +G + L
Sbjct: 4101 AHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG-HRVVDIACGSGDAQTLC 4159
Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
+T + V+S+G G LG G P I + G+ VV+V G + VAL SG
Sbjct: 4160 LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL--TGLGVVKVECGSQFSVALTKSGA 4217
Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
VYTWGKG LGHG + P + L+ + + + G VY +G
Sbjct: 4218 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4277
Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
G LG G ++ + RPR++ +L+ V++++ G HT+
Sbjct: 4278 EGQLG---DGTTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 131/269 (48%), Gaps = 6/269 (2%)
Query: 208 PRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
P L+E+++ V K+V +G L+ G V++ G G+LGHG+ P+ I
Sbjct: 4028 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4087
Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIH 325
L + VV +AAG ++ VT G +Y++G G LGH + D+L+P+ ++ + +
Sbjct: 4088 LRGI-EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146
Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARK 385
+ +GD + L V++WG G G LG G +P + SL V+V
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS 4206
Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
+ + L +G+VY +G + LG G D V RPR + L+ V I+TG H V
Sbjct: 4207 QFSVALTKSGAVYTWGKGDYHRLG---HGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
T+ G ++ +GDN+ QLG T P
Sbjct: 4264 CTEDGEVYTWGDNDEGQLGDGTTNAIQRP 4292
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 151/311 (48%), Gaps = 24/311 (7%)
Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
V Q++ +E + ++G+V+T NS DT P+LV+ L ++ A
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS-------DT----LAPQLVQGLASRNIVKIAAH 501
Query: 226 LNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGS-VVQIAAGPS 280
+ +L + G V++ G G+LGHGDT+ PK I+ ++ G VV IA G +
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561
Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS--AGDEHVVA 338
Y A+T G +Y++G G+ LGHG DE P + KG+ V+ V+ +GD +A
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL--KGLKVIDVACGSGDAQTLA 619
Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
+ +G V++WG G G LG G P+ + L+ V+V + + L G VY
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 679
Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
+G LG G + V P++L+ L+ V ++ G H + +T+ + +G N
Sbjct: 680 SWGKGDNQRLG---HGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736
Query: 459 ERAQLGHDTLR 469
++ Q DTLR
Sbjct: 737 DQCQ-HFDTLR 746
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 8/250 (3%)
Query: 113 NQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSA 171
++ + +G H L +S+ V+S G + G LGHG + C I VV V+A
Sbjct: 4040 KKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDRPRVIESLRGIEVVDVAA 4098
Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT--AGLNFT 229
H+A V +G ++T G GH D+ + +P+LVEAL+G + +G T
Sbjct: 4099 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQL-KPKLVEALQGHRVVDIACGSGDAQT 4157
Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
LT V + G +G+LG G + P I L +G VV++ G + +A+T +G
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG-VVKVECGSQFSVALTKSG 4216
Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
VY++G G LGHG +PR +Q +G V+ ++ G H V G VYTWG
Sbjct: 4217 AVYTWGKGDYHRLGHGSDDHVRRPRQVQGL--QGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 350 KGYCGALGHG 359
G LG G
Sbjct: 4275 DNDEGQLGDG 4284
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 125/247 (50%), Gaps = 12/247 (4%)
Query: 236 GHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
G ++ G N GQLG G + PTP +++A L V Q+ G + AVT +G +Y
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPV----QLIGGEQTLFAVTADGKLY 4007
Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
+ G G+ LG G P +++ + I V V++G +H +AL S G VY+WG+
Sbjct: 4008 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4067
Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD 412
G LGHG+ P + SL+ V V A + + G +Y +G +G LG D
Sbjct: 4068 DGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD 4127
Query: 413 RGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRG 470
S+ L+P+++++L+ H V I+ +G T+ +TD ++ +GD + +LG G
Sbjct: 4128 ---SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDG 4184
Query: 471 CLEPTEI 477
C P +I
Sbjct: 4185 CKVPMKI 4191
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 120 GRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFV 179
GR+ T L + VFS G G LGH C I + ++ +H+A +
Sbjct: 3056 GRHATALTVDGKVFSWGEGDDGKLGHF-SRMNCDKPRLIEALKTKRIRDIACGSSHSAAL 3114
Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN--FTGFLTIRGH 237
SG+++T G GH D N +P++V+ L G QV G T LT G
Sbjct: 3115 TSSGELYTWGLGEYGRLGHGD-NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3173
Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSG 297
V + G G+LG G + P++I L G V QI G + LA+T +GVV+++G G
Sbjct: 3174 VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTWGKG 3232
Query: 298 SNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
F LGHG +P+ ++ R G +V V+ G H +A+ SG VY WG G G
Sbjct: 3233 DYFRLGHGSDVHVRKPQVVEGLR--GKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 3290
Query: 358 HG 359
+G
Sbjct: 3291 NG 3292
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 27/329 (8%)
Query: 50 PQKFRSLVDLAASQLCALHSIYAGMSRNVQIELLNRCNGNWKRVLRFLQSVEHSSDIVET 109
P + L +L +Q+ + +SRN ++ + + + +Q + S +IV+
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRV--YTQAYNSDTLAPQLVQGLA-SRNIVKI 498
Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPS 162
+A + G ++ L + V+S G G LGHG P+ S + +
Sbjct: 499 AAHSD-----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQ----A 549
Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV 222
HVV ++ ++A + G+++T G + GH + P LV LKG+ V
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDV 608
Query: 223 TAGLNFTGFLTI--RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS 280
G L + G V + G +G+LG G + TPK I L+++ VV++ G
Sbjct: 609 ACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL-DVVKVRCGSQ 667
Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALD 340
+ +A+T +G VYS+G G N LGHG + P+ ++ +G V+ V+AG H +AL
Sbjct: 668 FSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL--QGKKVIDVAAGSTHCLALT 725
Query: 341 SSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
V++WG H D + T PEP
Sbjct: 726 EDSEVHSWGSN--DQCQHFDTLRVTKPEP 752
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
V QIA L ++ NG VY+ S D L P+ +Q + I + +
Sbjct: 453 VTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLASRNIVKIAAHS 502
Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA----VQVCARKRK 387
H +AL ++G VY+WG G G LGHGD + P+ +S+ A V +
Sbjct: 503 DGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTY 562
Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVV 445
+ + G +Y +G +G LG G S+ P ++ L+ V ++ +G T+
Sbjct: 563 SAAITAEGELYTWGRGNYGRLG---HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLA 619
Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
VT+ G+++ +GD + +LG GC P I+++++
Sbjct: 620 VTENGQVWSWGDGDYGKLGRGGSDGCKTPK--LIEKLQD 656
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 100/225 (44%), Gaps = 8/225 (3%)
Query: 117 ITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENH 175
I G H+ L S+ +++ G G LGHG TTQ + + V+QV+
Sbjct: 3104 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ-LKPKMVKVLLGHRVIQVACGSRD 3162
Query: 176 AA--FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
A + G VF+ GD G R + P+ +E L G Q+ G F+ LT
Sbjct: 3163 AQTLALTDEGLVFSWGDGDFGKLG-RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3221
Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
G V T G + +LGHG + P+ + L +V +A G + LAVT +G VY+
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG-KKIVHVAVGALHCLAVTDSGQVYA 3280
Query: 294 FGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
+G + G+G +P +Q +G + RV+ G H VA
Sbjct: 3281 WGDNDHGQQGNGTTTVNRKPTLVQGL--EGQKITRVACGSSHSVA 3323
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 119 TGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
+G TL L + +V+S G G LG G + C +I+ + VV+V +
Sbjct: 4152 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG-GSDGCKVPMKIDSLTGLGVVKVECGSQFSV 4210
Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
+ +SG V+T G GH + + RPR V+ L+G + G T G
Sbjct: 4211 ALTKSGAVYTWGKGDYHRLGHGSDDH-VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGE 4269
Query: 238 VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
V+T G N GQLG G T P+ +A L+ V ++A G ++ LA
Sbjct: 4270 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQG-KKVNRVACGSAHTLA 4315
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 119 TGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAA 177
+G TL ++ N V+S G G LG G + C + I VV+V +
Sbjct: 612 SGDAQTLAVTENGQVWSWGDGDYGKLGRG-GSDGCKTPKLIEKLQDLDVVKVRCGSQFSI 670
Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
+ + GQV++ G + GH T + P+L+E L+G V AG LT
Sbjct: 671 ALTKDGQVYSWGKGDNQRLGH-GTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSE 729
Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLA 284
VH+ GSN Q H DTL +P P ++ L + +V IA GP+ A
Sbjct: 730 VHSWGSNDQCQ--HFDTLRVTKPEPAALPGL-DTKHIVGIACGPAQSFA 775
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
D+ ++ SG +Y WG + G LG + +P P +L + VQ+ ++ F +
Sbjct: 3942 DDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
G +Y G+G+ G G ++ V P +L+S++ + +++ +G H + ++ G
Sbjct: 4002 ADGKLYA---TGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 451 RLFGFGDNERAQLGHDTLRGCLEPTEI 477
++ +G+ E +LGH C P I
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVI 4085
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 345 VYTWGKGYCGALG--HGDEID-KTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
V+ WG LG G +I + E LS+L VQV + F + G VY G
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN---VVQVAGGSKSLFAVTVEGKVYACG 3017
Query: 402 WMGFGSLGFPDRGVSD-KVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDN 458
G LG G+S V PR + +L ++ V +++ +G H +T G++F +G+
Sbjct: 3018 EATNGRLGL---GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 459 ERAQLGHDTLRGCLEPTEI 477
+ +LGH + C +P I
Sbjct: 3075 DDGKLGHFSRMNCDKPRLI 3093
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 10/276 (3%)
Query: 205 IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIA 264
+ PR + + V GL T F+ G V+TCG N GQLGH + R P+ +
Sbjct: 22 VLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKS--RKKPEQVV 79
Query: 265 PLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH-GEQHDELQPRAIQTFRRKG 323
L+ ++V ++ G ++ LA+ G VY++G S+ LG G + PR I++
Sbjct: 80 ALD-AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSL--SD 136
Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK-TLPEPLSSLKSHLAVQVC 382
I +V+V+ G H +AL + V+ WG+ G LG G + K T P+ L SL +QV
Sbjct: 137 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVA 196
Query: 383 ARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYH 442
A +FVL +G+++G+G FG LG D +D+ + P +L SLR+ + I G H
Sbjct: 197 AGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE--NDRYV-PNLLKSLRSQKIVYICCGEDH 253
Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF 478
T +T G +F FG QLGH++ + P ++F
Sbjct: 254 TAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVF 289
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 153/333 (45%), Gaps = 13/333 (3%)
Query: 136 GSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSF 194
G++ G LG G + V R +F V V H FVL G V+TCG N
Sbjct: 5 GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLG 64
Query: 195 CCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH-GD 253
GH + + +P V AL V+ G T L +G V+ G ++ GQLG G
Sbjct: 65 QLGHEKSRK---KPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGS 121
Query: 254 TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ-HDELQ 312
P++I L ++ +VQ+A G + LA++ V+ +G LG G +
Sbjct: 122 EECIRVPRNIKSLSDI-QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTS 180
Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSS 372
P+ +++ GI ++V+AG H L SG ++ WG+ G LG DE D+ +P L S
Sbjct: 181 PQLLKSLL--GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKS 238
Query: 373 LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
L+S V +C + T L G V+ FG G+G LG + + PR + L
Sbjct: 239 LRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG---HNSTSHEINPRKVFELMGSI 295
Query: 433 VSQISTGLYHT-VVVTDRGRLFGFGDNERAQLG 464
V++I+ G HT V GR++ FG QLG
Sbjct: 296 VTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 8/291 (2%)
Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
R+ ++ + +V++CG + G LGH + ++ A ++V VS E H +
Sbjct: 44 RHTVFVLDDGTVYTCGCNDLGQLGHEKSRKKPEQVVALD---AQNIVAVSCGEAHTLALN 100
Query: 181 QSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHT 240
GQV+ G +S G + I PR +++L + QV G + L+ V
Sbjct: 101 DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFC 160
Query: 241 CGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
G N +GQLG G D + +P+ + L + +Q+AAG ++ +T +G ++ +G
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLLKSLLGI-PFMQVAAGGAHSFVLTLSGAIFGWGRNKF 219
Query: 300 FCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
LG +++D P +++ R + I V + G++H AL G V+T+G G G LGH
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKI--VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHN 277
Query: 360 DEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVDTGSVYGFGWMGFGSLG 409
+ P + L + ++ C R+ + + +G +Y FG G G LG
Sbjct: 278 STSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 9/274 (3%)
Query: 98 QSVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGH-GPETTQCVSF 155
+S + +V A N + ++ G HTL +++ V++ G G LG G E +C+
Sbjct: 70 KSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSE--ECIRV 127
Query: 156 TR-INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL 214
R I S +VQV+ H+ + ++ +VF G N G + P+L+++L
Sbjct: 128 PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSL 187
Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
G+P QV AG + LT+ G + G N GQLG D DR P + L +V
Sbjct: 188 LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRS-QKIVY 246
Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
I G + A+T G V++FG+G LGH E+ PR + F G V ++ G +
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELMGSIVTEIACGRQ 304
Query: 335 HVVA-LDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
H A + SSG +Y++G G G LG G ++ P
Sbjct: 305 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSP 338
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 12/230 (5%)
Query: 91 KRVLRFLQSVEHSSDIVETSAGNQMQITTGRYHTLLISNSS-VFSCGSSLCGVLGHGPET 149
+ +R ++++ SDI +Q+ G YH+L +S +S VF G + G LG G +
Sbjct: 122 EECIRVPRNIKSLSDI------QIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDC 175
Query: 150 TQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPR 209
+ S + +QV+A H+ + SG +F G N G D N + P
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDR-YVPN 234
Query: 210 LVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV 269
L+++L+ + G + T LT G V T G+ +GQLGH T P+ + E +
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV--FELM 292
Query: 270 GSVV-QIAAGPSYMLA-VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
GS+V +IA G + A V +G +YSFG G N LG G + P ++
Sbjct: 293 GSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 17/339 (5%)
Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV---SA 171
Q+ G+ T +I +N +V +CG G LG G V T I+ V Q+
Sbjct: 4031 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHV-LTVISALQGFVVTQLVTSCG 4089
Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
S+ H+ + +SG+VF+ GD GH +++R RPR +EAL+G Q++ G +
Sbjct: 4090 SDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ-RRPRQIEALQGEEVVQMSCGFKHSAV 4148
Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE--EVGSVVQIAAGPSYMLAVTGNG 289
+T G + T G+ +G+LG G+T ++ P+ + LE ++G Q+A G ++ LAV+ +G
Sbjct: 4149 VTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG---QVACGLNHTLAVSADG 4205
Query: 290 -VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
+V++FG G LG G + P+ I GI + +V+ G + VAL G+VYT+
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVL--CGIGIKKVACGTQFSVALTKDGHVYTF 4263
Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 408
G+ L G + P+ + L + V T L G VY +G G L
Sbjct: 4264 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQL 4323
Query: 409 GFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
G G ++ V P ++ L+ +V QIS G H+ T
Sbjct: 4324 GL---GHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 25/315 (7%)
Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRLVEAL 214
PS + + A + + G V CG S G D+N + F P ++
Sbjct: 400 PSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPH--RSI 457
Query: 215 KGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ 274
K V + + G T T G V + G +G+LGHG++ + PK I + VV
Sbjct: 458 KKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC 515
Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
++AG + AVT +G +Y++G G LGHG+ + R I T + +V VS G
Sbjct: 516 VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNS----RNIPTLVKDISNVGEVSCGSS 571
Query: 335 HVVALDSSGY-VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
H +AL G V+++G G G LGHGD P+ + +L+ +VCA + + L
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 394 TGSVYGFG---WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRG 450
TG VY +G +G GS LRP++++ L A + +S G H + ++
Sbjct: 632 TGQVYAWGCGACLGCGS-------SEATALRPKLIEELAATRIVDVSIGDSHCLALSHDN 684
Query: 451 RLFGFGDNERAQLGH 465
++ +G+N Q G
Sbjct: 685 EVYAWGNNSMGQCGQ 699
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 128/266 (48%), Gaps = 14/266 (5%)
Query: 123 HTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
HTL + VFS G G LGHG +TQ VV VSA H+A V +
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 182 SGQVFTCGDNSSFCCGHRDTN-RPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH-VH 239
G+++T G+ GH D+N R I P LV+ + V +V+ G + T L+ G V
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNI--PTLVKDISNV--GEVSCGSSHTIALSKDGRTVW 584
Query: 240 TCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSN 299
+ G +G+LGHGDT PK I L+ + + ++ AG LA+T G VY++G G+
Sbjct: 585 SFGGGDNGKLGHGDTNRVYKPKVIEALQGM-FIRKVCAGSQSSLALTSTGQVYAWGCGA- 642
Query: 300 FCLGHG-EQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGH 358
CLG G + L+P+ I+ +V VS GD H +AL VY WG G G
Sbjct: 643 -CLGCGSSEATALRPKLIEEL--AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699
Query: 359 GDEIDK-TLPEPLSSLKSHLAVQVCA 383
G+ T P+ +S L Q+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISA 725
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 148/320 (46%), Gaps = 13/320 (4%)
Query: 161 PSAAHVVQVSASENHAAFVLQS-GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPC 219
PS + QV +N FV+Q+ G V CG+ S G +++ + ++ AL+G
Sbjct: 4024 PSFSQAQQVICGQN-CTFVIQANGTVLACGEGSYGRLGQGNSDD-LHVLTVISALQGFVV 4081
Query: 220 KQVTAGLNFTGF---LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIA 276
Q+ G LT G V + G +G+LGHG++ + P+ I L+ VVQ++
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG-EEVVQMS 4140
Query: 277 AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHV 336
G + VT +G +++FG+G LG G ++ P + +G + +V+ G H
Sbjct: 4141 CGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTAL--EGYQIGQVACGLNHT 4198
Query: 337 VALDSSG-YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
+A+ + G V+ +G G G LG G+ K+ P+ + L +V + + L G
Sbjct: 4199 LAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDG 4258
Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
VY FG +G P+ G + RP+ + L + ++ G HT+ + G ++ +
Sbjct: 4259 HVYTFGQDRL--IGLPE-GRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAW 4315
Query: 456 GDNERAQLGHDTLRGCLEPT 475
G N QLG EPT
Sbjct: 4316 GSNSEGQLGLGHTNHVREPT 4335
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 11/230 (4%)
Query: 238 VHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
V+ G+ HGQL G + P + AP Q+ G + + NG V + G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVP---AAAP--SFSQAQQVICGQNCTFVIQANGTVLACGE 4053
Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG-DEHVVALDSSGYVYTWGKGYCGA 355
GS LG G D I + + + S G D H +AL SG V++WG G G
Sbjct: 4054 GSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4113
Query: 356 LGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
LGHG+ + P + +L+ VQ+ + + V+ G ++ FG +G LG +
Sbjct: 4114 LGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN--T 4171
Query: 416 SDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL-FGFGDNERAQLG 464
S+K L P + +L + + Q++ GL HT+ V+ G + + FGD + +LG
Sbjct: 4172 SNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
VY +GS S+ L G Q LQP+ +F + AG + + G V GK
Sbjct: 374 VYVWGSNSSHQLVEGTQEKILQPKLAPSFS----DAQTIEAGQYCTFVISTDGSVRACGK 429
Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKR----KTFVLVDTGSVYGFGWMGFG 406
G G LG GD +++ + L + + H +++ + + T G V+ +G +G
Sbjct: 430 GSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYG 488
Query: 407 SLGFPDRGVSDKVLRPRILD-SLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
LG G S P+++ L+ V +S G H+ VT+ G L+ +G+ + +LGH
Sbjct: 489 KLG---HGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 126 LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQV 185
L S V++ G C LG G + I +A +V VS ++H + +V
Sbjct: 629 LTSTGQVYAWGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEV 686
Query: 186 FTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
+ G+NS CG ++ PI +P+ V L G+ +Q++AG
Sbjct: 687 YAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAG 726
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
VY WG G G L E + + P ++ A QV + TFV+ G+V G
Sbjct: 3999 VYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLACGEGS 4055
Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY---HTVVVTDRGRLFGFGDNERA 461
+G LG +G SD + ++ +L+ V+Q+ T H++ +T+ G +F +GD +
Sbjct: 4056 YGRLG---QGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112
Query: 462 QLGHDTLRGCLEPTEIFIQEMEE 484
+LGH P +I + EE
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEE 4135
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 162/347 (46%), Gaps = 8/347 (2%)
Query: 130 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
S+++ G + G LG G E ++ + T S VQ++ E V G++F G
Sbjct: 4049 STIYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATG 4107
Query: 190 DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQV--TAGLNFTGFLTIRGHVHTCGSNTHG 247
S G ++ P L+ +L+ V K+V +G LT G V+ G G
Sbjct: 4108 YGSGGRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166
Query: 248 QLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ 307
+LGHG+ + PK + L + SV IA G ++ A+T +G V ++G G LGHG+
Sbjct: 4167 KLGHGNRMSYDRPKLVEHLNGM-SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDS 4225
Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
D+L+P+ ++ + +GD + + V++WG G G LG G LP
Sbjct: 4226 EDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLP 4285
Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
+ SL V+V + + L +G+VY +G F LG G D V RP+ + +
Sbjct: 4286 YKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLG---HGSVDHVRRPKKVAA 4342
Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
L+ + I+TG H V +D G ++ +GDN+ QLG T+ P
Sbjct: 4343 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4389
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 9/283 (3%)
Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAG 225
V V++ H + G+V+ G+ GH NR + RP+LVE L G+ + G
Sbjct: 4139 VAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH--GNRMSYDRPKLVEHLNGMSVADIACG 4196
Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLA 284
+ +T GHV T G +G+LGHGD+ D+ PK + L ++ + +G + L
Sbjct: 4197 SAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLC 4256
Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
+T + V+S+G G LG G P I++ G+ VV+V G + VAL SG
Sbjct: 4257 ITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESL--AGLGVVKVECGSQFSVALTKSGA 4314
Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
VYTWGKG LGHG P+ +++L+ + + D+G VY +G
Sbjct: 4315 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDND 4374
Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
G LG G + RPR++ +L+ H+ +++ G HT+ ++
Sbjct: 4375 EGQLG---DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALS 4414
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 159/338 (47%), Gaps = 17/338 (5%)
Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQ---VS 170
+ I G ++S + V++CG G LG G T V +VV+ V
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVH 3079
Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF-RPRLVEALKGVPCKQVTAGLNFT 229
+ HA + G+VF+ G+ GH NR +PRLVEAL+ + V G + +
Sbjct: 3080 SGGKHALALTLDGKVFSWGEGEDGKLGH--GNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137
Query: 230 GFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGP--SYMLAVTG 287
++ +G ++T G +G+LGHGD + PK + L VVQ+A G + LA+T
Sbjct: 3138 AAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAG-RRVVQVACGSRDAQTLALTE 3196
Query: 288 NGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYT 347
+G V+S+G G LG G P I+ R GI VV++ G + +AL +G V+T
Sbjct: 3197 DGAVFSWGDGDFGKLGRGGSEGSDTPHEIE--RLSGIGVVQIECGAQFSLALTRAGEVWT 3254
Query: 348 WGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
WGKG LGHG + P+P+ L+ + V + D G VY +G G
Sbjct: 3255 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3314
Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
G + V+ K P ++ L A V++++ G H++
Sbjct: 3315 QGSGNTFVNKK---PALVIGLDAVFVNRVACGSSHSIA 3349
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 17/294 (5%)
Query: 178 FVLQSGQVFTCGDNSSFCCGHRDT-NRPIFRPRLVEALKGVPCKQVT--AGLNFTGFLTI 234
V Q G+V+ CG+ ++ G T N P+ P + L+ K+V +G LT+
Sbjct: 3033 IVSQDGKVYACGEGTNGRLGLGVTHNVPL--PHQLPVLRQYVVKKVAVHSGGKHALALTL 3090
Query: 235 RGHVHTCGSNTHGQLGHGD--TLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
G V + G G+LGHG+ TLD+P + + +A G S+ A++ G +Y
Sbjct: 3091 DGKVFSWGEGEDGKLGHGNRTTLDKP---RLVEALRAKKIRDVACGSSHSAAISSQGELY 3147
Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG--DEHVVALDSSGYVYTWGK 350
++G G LGHG+ +L+P+ + G VV+V+ G D +AL G V++WG
Sbjct: 3148 TWGLGEYGRLGHGDNTTQLKPKLVTAL--AGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3205
Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
G G LG G P + L VQ+ + + L G V+ +G + LG
Sbjct: 3206 GDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG- 3264
Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
G V +P+ + LR V ++ G H + VTD G+++ +GDN+ Q G
Sbjct: 3265 --HGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQG 3316
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 125/272 (45%), Gaps = 10/272 (3%)
Query: 100 VEHSSDIVETSAGNQMQITTGRYHTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTR- 157
+ H ++ ++ + +G H L ++ + VFS G G LGHG TT + R
Sbjct: 3061 LPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTT--LDKPRL 3118
Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
+ A + V+ +H+A + G+++T G GH D N +P+LV AL G
Sbjct: 3119 VEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGD-NTTQLKPKLVTALAGR 3177
Query: 218 PCKQVTAGLN--FTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
QV G T LT G V + G G+LG G + TP I L +G VVQI
Sbjct: 3178 RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG-VVQI 3236
Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
G + LA+T G V+++G G + LGHG +P+ I R G V+ V+ G H
Sbjct: 3237 ECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLR--GRRVIHVAVGALH 3294
Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
+A+ +G VY WG G G G+ P
Sbjct: 3295 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKP 3326
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 128/285 (44%), Gaps = 14/285 (4%)
Query: 113 NQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTR---INFPSAAHVVQ 168
++ + +G H L L + V++ G G LGHG +S+ R + + V
Sbjct: 4137 KKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNR----MSYDRPKLVEHLNGMSVAD 4192
Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
++ H+A + SG V T G GH D+ + RP+LVEAL G + G
Sbjct: 4193 IACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL-RPKLVEALLGYRAIDIACGSGD 4251
Query: 229 TGFLTIRG--HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
L I +V + G +G+LG G + P I L +G VV++ G + +A+T
Sbjct: 4252 AQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG-VVKVECGSQFSVALT 4310
Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
+G VY++G G LGHG +P+ + +G ++ ++ G H VA SG VY
Sbjct: 4311 KSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL--QGKKIISIATGSLHCVACSDSGEVY 4368
Query: 347 TWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
TWG G LG G P +++L+ V+V T L
Sbjct: 4369 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 15/269 (5%)
Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
++ G GH DT+ P + AL+ + V G +++ +T G++ T G
Sbjct: 637 AYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRG 695
Query: 245 THGQLGHGDTLDRPTPKSIAPLEEVGSV-VQIAAGPSYMLAVTGNGVVYSFGSGSNFCLG 303
T+ +LGHG++ DR P + L + V V + +G ++ LA+T G+V+++G G LG
Sbjct: 696 TYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLG 755
Query: 304 HGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEID 363
+G + LQP +++ R V RV AG + VAL S G +YTWGK C LGH ++
Sbjct: 756 NGNCNGSLQPILVESLPR----VQRVFAGSQFSVALSSEGQLYTWGKATC--LGH-QLVE 808
Query: 364 K-----TLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
+ ++P +SSL+ V V L +G V+G+G + P S+
Sbjct: 809 RSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI-CPASVSSEP 867
Query: 419 VLRPRILDSLRAHHVSQISTGLYHTVVVT 447
+LR IL SL S I+ ++V T
Sbjct: 868 LLRTPILVSLPTFPASGIACTSAQSLVWT 896
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 12/245 (4%)
Query: 238 VHTCGSNTHGQLG--HGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
V G N QLG G + PT ++I+ L + IA G + V+ +G VY+
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPI----HIAGGSKSLFIVSQDGKVYAC 3043
Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
G G+N LG G H+ P + R+ + V V +G +H +AL G V++WG+G G
Sbjct: 3044 GEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 355 ALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG 414
LGHG+ P + +L++ V + + G +Y +G +G LG D
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNT 3163
Query: 415 VSDKVLRPRILDSLRAHHVSQISTGLY--HTVVVTDRGRLFGFGDNERAQLGHDTLRGCL 472
L+P+++ +L V Q++ G T+ +T+ G +F +GD + +LG G
Sbjct: 3164 TQ---LKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSD 3220
Query: 473 EPTEI 477
P EI
Sbjct: 3221 TPHEI 3225
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 12/238 (5%)
Query: 231 FLTIRGH--VHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
FL I + ++ G+ +LGHGDT R P IA LE+ V + G SY A+T
Sbjct: 628 FLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQ-HCVQSVYCGCSYSAAITCG 686
Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
G + ++G G+ LGHG D P + + V + +GD H +AL S G V+ W
Sbjct: 687 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746
Query: 349 GKGYCGALGHGD---EIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 405
G G G LG+G+ + L E L ++ +V A + + L G +Y +G
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPRVQ-----RVFAGSQFSVALSSEGQLYTWGKATC 801
Query: 406 GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQL 463
+R V + PR++ SL+ + ++ + H + ++ G +FG+G N+ Q+
Sbjct: 802 LGHQLVERSVQGCSV-PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%)
Query: 225 GLNFTGFLTIRGHVHTCGSNTHGQLG--HGDTLDRPTP-KSIAPLEEVGSVVQIAAGPSY 281
L++ G TI G H N GQLG G + PTP ++++ L V Q+A G
Sbjct: 4042 ALSWGGASTIYGWGH----NHRGQLGGLEGSRIKTPTPCEALSLLRPV----QLAGGEQS 4093
Query: 282 MLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
+ AVT +G +++ G GS LG G P + + + + V V++G +H +AL +
Sbjct: 4094 LFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT 4153
Query: 342 SGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
G VY WG+G G LGHG+ + P+ + L + + + +G V +G
Sbjct: 4154 EGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWG 4213
Query: 402 WMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRGRLFGFGDNE 459
+G LG D S+ LRP+++++L + I+ +G T+ +TD ++ +GD +
Sbjct: 4214 KGRYGRLGHGD---SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGD 4270
Query: 460 RAQLGHDTLRGCLEPTEI 477
+LG GC P +I
Sbjct: 4271 YGKLGRGGSDGCKLPYKI 4288
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
+ Q+A + ML ++ G +Y++ E +P ++ +
Sbjct: 574 IKQVACCETQMLILSQEGKLYTWRLAK----------PEAEPLPMEEVAHDVFISIAGHC 623
Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVL 391
H +A+DS+ Y+WG G LGHGD + +P +++L+ H V + +
Sbjct: 624 EGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683
Query: 392 VDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDR 449
G++ +G + LG G SD P ++ +L H V ++ +G H++ +T
Sbjct: 684 TCGGNLLTWGRGTYARLG---HGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSE 740
Query: 450 GRLFGFGDNERAQLGHDTLRGCLEP 474
G +F +GD + +LG+ G L+P
Sbjct: 741 GLVFAWGDGDYGKLGNGNCNGSLQP 765
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
D+ ++ + +Y WG + G LG + P P +L VQ+ ++ F +
Sbjct: 4039 DDWALSWGGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT 4098
Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS--TGLYHTVVVTDRG 450
G ++ G+GS G G SD P +L SL+ V +++ +G H + +T G
Sbjct: 4099 PDGKLFA---TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4155
Query: 451 RLFGFGDNERAQLGH 465
++ +G+ E +LGH
Sbjct: 4156 EVYAWGEGEDGKLGH 4170
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 6/260 (2%)
Query: 207 RPRLVEA-LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP 265
+PR ++A G+ Q +G + + L V++CG N+ GQLG P+ I
Sbjct: 11 KPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQA 70
Query: 266 LEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGI 324
L ++ V ++ G + +AV G V+++G+GS LG GE + P I+ GI
Sbjct: 71 LNDL-HVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL--AGI 127
Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG-DEIDKTLPEPLSSLKSHLAVQVCA 383
+++VS G H +AL G+V++WG+ G LG G + + +P+ + SL+ QV A
Sbjct: 128 KIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAA 187
Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
+F L TG+ +G+G G L V +++ +P + +L+ V IS G HT
Sbjct: 188 GGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247
Query: 444 VVVTDRGRLFGFGDNERAQL 463
V+T+ G++F FG N QL
Sbjct: 248 AVLTEEGQVFTFGGNSSGQL 267
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 139/307 (45%), Gaps = 27/307 (8%)
Query: 109 TSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINF 160
TS +Q +G +H+LL+ SN V+SCG + G LG PE Q ++
Sbjct: 19 TSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALN------ 72
Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
HV VS + H+ V G+VF G S G + F P ++AL G+
Sbjct: 73 --DLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130
Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGP 279
QV+ G + L+ GHV + G N+ GQLG G ++ + P+ + LE + + Q+AAG
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI-PLAQVAAGG 189
Query: 280 SYMLAVTGNGVVYSFGSGSN----FCLGHGEQHDEL-QPRAIQTFRRKGIHVVRVSAGDE 334
++ A++ G SFG GSN L + +++ +P +I K + V+ +S G E
Sbjct: 190 THSFALSLTGT--SFGWGSNRSGQLALSGNKVKEQIYKPHSIGAL--KNLSVIYISCGYE 245
Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
H L G V+T+G G L + P+ + + ++ CA + T
Sbjct: 246 HTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQIECASYHTIAYVYTT 305
Query: 395 GSVYGFG 401
G V G
Sbjct: 306 GQVVSLG 312
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 323 GIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS-HLAVQV 381
GI +++ ++G+ H + L S+ VY+ G G LG + PEP+ +L H+ +
Sbjct: 21 GIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS 80
Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
C K + + G V+ +G G LG + + P + +L + Q+S G Y
Sbjct: 81 CG-KEHSVAVCHKGKVFAWGAGSEGQLGIGE--FKEISFMPTKIKALAGIKIIQVSCGHY 137
Query: 442 HTVVVTDRGRLFGFGDNERAQLG 464
H++ +++ G +F +G N QLG
Sbjct: 138 HSLALSEDGHVFSWGRNSEGQLG 160
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 121/252 (48%), Gaps = 5/252 (1%)
Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQI 275
G Q +G + L V +CG N+ GQLG P+ I LE + V +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETL-IVDLV 80
Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDE 334
+ G + LAV G V+++G+GS LG GE + P+ I T I +++VS G
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTL--NDIKIIQVSCGHY 138
Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFVLVD 393
H +AL V++WGK G LG G E + P+ + SL+ QV A +F L
Sbjct: 139 HSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198
Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
G+ +G+G G L R V + +P + +L+ V IS G HT V+T G++F
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 454 GFGDNERAQLGH 465
FGDN QLG+
Sbjct: 259 TFGDNRSGQLGY 270
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 20/302 (6%)
Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
A ++Q ++ E H+ +L + +V +CGDNS G R R P ++AL+ + V+
Sbjct: 23 AELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-PEPIQALETLIVDLVS 81
Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP-TPKSIAPLEEVGSVVQIAAGPSYM 282
G + + +G V G+ + GQLG G+ + TPK I L ++ ++Q++ G +
Sbjct: 82 CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDI-KIIQVSCGHYHS 140
Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDS 341
LA++ + V+S+G S+ LG G++ + P+ +++ +GI + +V+AG H AL
Sbjct: 141 LALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL--EGIPLAQVAAGGAHSFALSL 198
Query: 342 SGYVYTWGKGYCGAL---GHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
G + WG G L G + P + +LK+ V + T VL G V+
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVF 258
Query: 399 GFGWMGFGSLGF---PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTDRGRLFG 454
FG G LG+ P++ V R +D L VSQI G YHT+ V G++
Sbjct: 259 TFGDNRSGQLGYSPTPEKRGPQLVER---IDGL----VSQIDCGSYHTLAYVHTTGQVVS 311
Query: 455 FG 456
FG
Sbjct: 312 FG 313
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 19/297 (6%)
Query: 115 MQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG-------PETTQCVSFTRINFPSAAHV 166
+Q +G H+LL+ +N V SCG + G LG PE Q + ++
Sbjct: 26 LQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDL------ 79
Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
VS + H+ V G+VF G S G + F P+ + L + QV+ G
Sbjct: 80 --VSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGH 137
Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTL-DRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
+ L+ V + G N+HGQLG G + +P+ + LE + + Q+AAG ++ A+
Sbjct: 138 YHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-PLAQVAAGGAHSFAL 196
Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQP-RAIQTFRRKGIHVVRVSAGDEHVVALDSSGY 344
+ G + +GS S L ++ +Q + + K + VV +S GD H L G
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGK 256
Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFG 401
V+T+G G LG+ +K P+ + + ++ C + TG V FG
Sbjct: 257 VFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 9/254 (3%)
Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
++T V G N LG GD PK + L +++ S+ +GP ++L T +
Sbjct: 36 YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL-SYGSGP-HVLLTTED 93
Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
GVVY++G LG+G + + P + T V+ V+ G H +AL + G ++ W
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVIEVACGSHHSMALAADGELFAW 152
Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
G CG +G G ++ P +++ L + V + + + ++D+G VYG+G+ G G
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQ 212
Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
LG + G L P + +L V+QI G HT+ +TD G L+ +G N QLG +
Sbjct: 213 LGLGNNG---NQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGS 269
Query: 468 LRGCLEPTEIFIQE 481
L PT+I +++
Sbjct: 270 KNNLLSPTQIMVEK 283
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 6/252 (2%)
Query: 172 SENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
S N A +V + +VF G N S C G D N+ P+ +EAL G K ++ G
Sbjct: 30 SANEAIYVTDNDEVFVFGLNYSNCLGTGD-NQSTLVPKKLEALCGKKIKSLSYGSGPHVL 88
Query: 232 LTIR-GHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGV 290
LT G V+ G N + QLG+G T P + + V+++A G + +A+ +G
Sbjct: 89 LTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGE 148
Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
++++G + +G G ++ PR + VV ++ G +A+ SG VY WG
Sbjct: 149 LFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK-RVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
G LG G+ ++ P +++L Q+ T L D G +Y +G +G LG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG- 266
Query: 411 PDRGVSDKVLRP 422
G + +L P
Sbjct: 267 --TGSKNNLLSP 276
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 115/286 (40%), Gaps = 5/286 (1%)
Query: 118 TTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVS-ASENHA 176
T+ + N VF G + LG G + V ++ + +S S H
Sbjct: 29 TSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP-KKLEALCGKKIKSLSYGSGPHV 87
Query: 177 AFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRG 236
+ G V+ G N G+ TN+ I ++ L +V G + + L G
Sbjct: 88 LLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 237 HVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
+ G N GQ+G G T ++PTP+ + VV IA G + +AV +G VY +G
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGY 207
Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGAL 356
N LG G ++L P + G+ V ++ G H +AL G +Y WG G L
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALH--GMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQL 265
Query: 357 GHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
G G + + P + K + + C + G VY +G
Sbjct: 266 GTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
+++ G +H++ L ++ +F+ G + CG +G G Q N VV ++ +
Sbjct: 131 IEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQ 190
Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
+ VL SG+V+ G N + G N P V AL G+ Q+ G T LT
Sbjct: 191 TSSMAVLDSGEVYGWGYNGNGQLG-LGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALT 249
Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPS--YMLAVTGNGVV 291
G ++ G+NT+GQLG G + +P I + E V++IAA S A T G V
Sbjct: 250 DEGLLYAWGANTYGQLGTGSKNNLLSPTQI--MVEKERVIEIAACHSTHTSAAKTQGGHV 307
Query: 292 YSFG 295
Y +G
Sbjct: 308 YMWG 311
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 208 PRLVEALKG-VPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
P+ ++ KG +QV AG +T+ ++T GS HGQLGHGD PK
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400
Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQ--HDELQPRAIQTF 319
+ L+ SV +++ G + + +T G +YSFGS CLG + + L+P + F
Sbjct: 401 HVEKLQG-KSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFF 459
Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
+ + +VS GD H++AL S VY+WG G G LG E D P+ + + V
Sbjct: 460 LNEPVD--QVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIV 517
Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRG---VSDKVLRP-------RILDSLR 429
VC +F+L TG V G LG ++ + + + L
Sbjct: 518 NVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLS 577
Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
+ + IS G HT + +RGRL FG N+ QLG
Sbjct: 578 FYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLG 612
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 313 PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLP 367
P+ + F+ G +V AGD H + +YTW G G LGHGD P
Sbjct: 341 PQKLDVFK-GGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQP 399
Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
+ + L+ +V T + D G +Y FG +G LG ++ +VL P ++D
Sbjct: 400 KHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGV-NQSAGSEVLEPLLVDF 458
Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQ 480
V Q+S G H + +T ++ +G E +LG D+ P ++ +Q
Sbjct: 459 FLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQ 511
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 134/314 (42%), Gaps = 35/314 (11%)
Query: 107 VETSAGNQMQ-ITTGRYHTLLISNS-SVFSCGSSLCGVLG-HGPETTQCVSFTRINFPSA 163
VE G +Q ++ G T+ I++ ++S GS G LG + ++ + ++F
Sbjct: 402 VEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLN 461
Query: 164 AHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVP 218
V QVS ++H + +S V++ G CG D+ ++ P+ VE +G+
Sbjct: 462 EPVDQVSCGDSHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLC 515
Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEE 268
V G + + LT+ G V CG N H +LG H + P S+ ++
Sbjct: 516 IVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQ 575
Query: 269 VG--SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHV 326
+ + I+ G ++ A+ G + +FGS LG G+ L + G V
Sbjct: 576 LSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGG-PLGGKQV 634
Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAV 379
+RVS GDE A + +++ WG G G L G +I + P P+ H+
Sbjct: 635 IRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHHVTD 694
Query: 380 QVCARKRKTFVLVD 393
C R T ++V+
Sbjct: 695 LSC-RGWHTILIVE 707
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)
Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
SAGN++ TT N +F G++ CG LG G + + R++ + + +
Sbjct: 53 SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 103
Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
S S H G+VFT G N+ G+ TN + + L +V G
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 163
Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
+ LT G V G N GQ+G G T+++P P+ + + VV IA G +AV
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 223
Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
G VY +G N LG G + QP + +GI V RV+ G H + L G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
G G LG G++ +++ P P++ K + + C + G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90
Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
+ L + + + +GP +LA T G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148
Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
V+ V+ G H + L S G V+ WG G +G G +++ +P ++ L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208
Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
+ + +VDTG VY +G+ G G LG + G R L +R V +++ G
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265
Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
N + + ++F G N C G D I PR +++L G + C +G +
Sbjct: 56 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 113
Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
+++G ++ +G G ++ PR + + + VV ++ G +A+ +G VY WG
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
G LG G+ ++ P +++L+ +V T VL D G VY +G +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 13/294 (4%)
Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
SAGN++ TT N +F G++ CG LG G + + R++ + + +
Sbjct: 53 SAGNEVLYTT--------VNDEIFVLGTNCCGCLGLG-DVQSTIEPRRLDSLNGKKIACL 103
Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
S S H G+VFT G N+ G+ TN + + L +V G
Sbjct: 104 SYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 163
Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
+ LT G V G N GQ+G G T+++P P+ + + VV IA G +AV
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDT 223
Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
G VY +G N LG G + QP + +GI V RV+ G H + L G VY W
Sbjct: 224 GEVYVWGYNGNGQLGLGNSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAW 281
Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
G G LG G++ +++ P P++ K + + C + G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 10/282 (3%)
Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPR 90
Query: 262 SIAPLE-EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFR 320
+ L + + + +GP +LA T G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLNGKKIACLSYGSGPHIVLATT-EGEVFTWGHNAYSQLGNGTTNHGLVPCHIST-N 148
Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLAV 379
V+ V+ G H + L S G V+ WG G +G G +++ +P ++ L++ + V
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVV 208
Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
+ + +VDTG VY +G+ G G LG + G R L +R V +++ G
Sbjct: 209 TIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACG 265
Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 266 YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEK 307
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKG--VPCKQVTAGLNFTGF 231
N + + ++F G N C G D I PR +++L G + C +G +
Sbjct: 56 NEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTI-EPRRLDSLNGKKIACLSYGSGPHIV-L 113
Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V
Sbjct: 114 ATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEV 173
Query: 292 YSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKG 351
+++G ++ +G G ++ PR + + + VV ++ G +A+ +G VY WG
Sbjct: 174 FAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 352 YCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
G LG G+ ++ P +++L+ +V T VL D G VY +G +G LG
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLG 290
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
+ L+ ++ Q++ G + + VT G +Y+FGS C+G + + L+P + F
Sbjct: 419 HVEKLQG-KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFF 477
Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
+ +VS GD HVV L + VY+WG G G LG E D P+ + K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIV 535
Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 429
V TF+L +G V G F LG G+ + + L
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
+ + I+ G HT + +RGRL FG N+ QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
+NH + ++ +V++ G CG D+ + P+ V+ K + V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCG 540
Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG----------HGDTLDRPTPKSIAPLEEVG--SVV 273
+ T LT G V CG N +LG H + P S +++ +
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600
Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
IA G ++ A+ G + +FG LG G L + G V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659
Query: 334 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
E +A +++ WG G G L HG +I + P P+ H+ C R
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718
Query: 387 KTFVLVD 393
T ++V+
Sbjct: 719 HTILIVE 725
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
+ G +V AG+ H + +YTW G G LGHGD+ P+ + L+
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425
Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
QV T + D G +Y FG +G +G D+ +VL P L+ ++ V Q
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVAGPEVLEPMQLNFFLSNPVEQ 484
Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
+S G H VV+T ++ +G E +LG D+ P ++ +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDV 528
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)
Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385
Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
+++T G GH D + +R P+ VE L+G +QV+ G +FT +T
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443
Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 289
G ++ GS+ +G +G +D+ P+ + P++ V Q++ G ++++ +T N
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499
Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
VYS+G G LG + D P+ + K + +V V G + L SG V G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQKVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Query: 350 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 396
LG E+ T L+ S ++ A K T + + G
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617
Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
+ FG G LG G K L +L L V ++S G T+ TD +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674
Query: 456 GDNERAQLGHDTLRGCLEPTE 476
G+ +L + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 129/332 (38%), Gaps = 22/332 (6%)
Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
G+ L G LGHG + + + + QVS ++ V GQ++ G + C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457
Query: 196 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
G P + P + P +QV+ G N LT V++ G +G+LG
Sbjct: 458 MGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517
Query: 255 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 305
D TP+ + P + VQ +++L +G + G N C+ H
Sbjct: 518 EDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577
Query: 306 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
H+ + ++ + +R ++ G H A+D G + T+G CG LG G+ +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637
Query: 365 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 417
L L ++V T D ++ +G G G L +
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697
Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
RP I SL HHV +S +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 17/147 (11%)
Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDT 394
V + VY WG G K+ P+ L +KS A QVCA V+
Sbjct: 340 AVVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRL 452
+Y + M G+ G DK +P+ ++ L+ + Q+S G TV VTD G+L
Sbjct: 388 KELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQL 447
Query: 453 FGFGDNERAQLGHDTLRG--CLEPTEI 477
+ FG + +G D + G LEP ++
Sbjct: 448 YAFGSDYYGCMGVDKVAGPEVLEPMQL 474
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 9/254 (3%)
Query: 231 FLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPL--EEVGSVVQIAAGPSYMLAVTGN 288
++T V G N LG GD PK + L +++ S+ +GP +L+ T +
Sbjct: 36 YVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL-SYGSGPHVLLS-TED 93
Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
GVVY++G LG+G + + P + T VV V+ G H +AL + G V+ W
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT-NLLIKQVVEVACGSHHSMALAADGEVFAW 152
Query: 349 GKGYCGALGHGDEIDKTLPEPLSS-LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
G CG +G G ++ P +++ L V + + + ++D G VYG+G+ G G
Sbjct: 153 GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQ 212
Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
LG + G L P + +L + V+QI G HT+ +TD G L+ +G N QLG
Sbjct: 213 LGLGNNG---NQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGN 269
Query: 468 LRGCLEPTEIFIQE 481
L P I +++
Sbjct: 270 KNNLLSPAHIMVEK 283
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 3/228 (1%)
Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTI 234
H + G V+ G N G+ TN+ I ++ L +V G + + L
Sbjct: 86 HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAA 145
Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSF 294
G V G N GQ+G G T ++PTP+ + + VV IA G + +AV NG VY +
Sbjct: 146 DGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 295 GSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
G N LG G ++L P + + V ++ G H +AL G +Y WG G
Sbjct: 206 GYNGNGQLGLGNNGNQLTPVRVAALH--SVCVNQIVCGYAHTLALTDEGLLYAWGANTYG 263
Query: 355 ALGHGDEIDKTLPEPLSSLKSHLA-VQVCARKRKTFVLVDTGSVYGFG 401
LG G++ + P + K + + C + G VY +G
Sbjct: 264 QLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 21/275 (7%)
Query: 208 PRLVEALK-GVPCKQVTAGLNFTGFLTIRGHVHTC-----GSNTHGQLGHGDTLDRPTPK 261
P+ ++ +K G +QV AG +T+ ++T G+ HGQLGHGD PK
Sbjct: 359 PQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPK 418
Query: 262 SIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH--DELQPRAIQTF 319
+ L+ ++ Q++ G + + VT G +Y+FGS C+G + + L+P + F
Sbjct: 419 HVEKLQG-KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFF 477
Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAV 379
+ +VS GD HVV L + VY+WG G G LG E D P+ + K+ + V
Sbjct: 478 LSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIV 535
Query: 380 QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD--RGVSDKVLRPRI--------LDSLR 429
V TF+L +G V G F LG G+ + + L
Sbjct: 536 AVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLS 595
Query: 430 AHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
+ + I+ G HT + +RGRL FG N+ QLG
Sbjct: 596 FYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLG 630
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 40/307 (13%)
Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG----HGPETTQCVSFTRINFPSAAHVVQVS 170
Q++ G T+ +++ +++ GS G +G GPE + + ++NF + V QVS
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPM---QLNFFLSNPVEQVS 486
Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHR-----DTNRPIFRPRLVEALKGVPCKQVTAG 225
+NH + ++ +V++ G CG D+ + P+ V+ K + V G
Sbjct: 487 CGDNHVVVLTRNKEVYSWG------CGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCG 540
Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTL----------DRPTPKSIAPLEEVG--SVV 273
+ T LT G V CG N +LG + + P S +++ +
Sbjct: 541 CDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIR 600
Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
IA G ++ A+ G + +FG LG G L + G V+RVS GD
Sbjct: 601 TIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGG-PLGGKQVIRVSCGD 659
Query: 334 EHVVALDSSGYVYTWGKGYCGALG-------HGDEIDKTLPEPLSSLKSHLAVQVCARKR 386
E +A +++ WG G G L HG +I + P P+ H+ C R
Sbjct: 660 EFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRPIFGSLHHVPDLSC-RGW 718
Query: 387 KTFVLVD 393
T ++V+
Sbjct: 719 HTILIVE 725
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 6/164 (3%)
Query: 321 RKGIHVVRVSAGDEHVVALDSSGYVYTW-----GKGYCGALGHGDEIDKTLPEPLSSLKS 375
+ G +V AG+ H + +YTW G G LGHGD+ P+ + L+
Sbjct: 366 KSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQG 425
Query: 376 HLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQ 435
QV T + D G +Y FG +G +G D+ +VL P L+ ++ V Q
Sbjct: 426 KAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGV-DKVSGPEVLEPMQLNFFLSNPVEQ 484
Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
+S G H VV+T ++ +G E +LG D+ P + +
Sbjct: 485 VSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDV 528
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 130/332 (39%), Gaps = 22/332 (6%)
Query: 136 GSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFC 195
G+ L G LGHG + + + + QVS ++ V GQ++ G + C
Sbjct: 399 GTKLHGQLGHGDKASY-RQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGC 457
Query: 196 CGHRDTNRP-IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT 254
G + P + P + P +QV+ G N LT V++ G +G+LG
Sbjct: 458 MGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSE 517
Query: 255 LDRPTPKSI-APLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS----GSNFCL----GHG 305
D TP+ + P + VQ +++L +G + G N C+ H
Sbjct: 518 EDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHE 577
Query: 306 EQHDELQPRAIQTFRRKGIHVVR-VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDK 364
H+ + ++ + +R ++ G H A+D G + T+G CG LG G+ +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKR 637
Query: 365 TLPEPLS-SLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPD------RGVSD 417
L L ++V T D ++ +G G G L +
Sbjct: 638 LGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICT 697
Query: 418 KVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
RP I SL HHV +S +HT+++ ++
Sbjct: 698 SWPRP-IFGSL--HHVPDLSCRGWHTILIVEK 726
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 47/381 (12%)
Query: 121 RYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVL 180
R T+ + +V + +S V G G T Q + + S QV A H A V
Sbjct: 330 RSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIK----SGCSARQVCAGNTHFAVVT 385
Query: 181 QSGQVFTC-----GDNSSFCCGHRDTNRPIFR-PRLVEALKGVPCKQVTAGLNFTGFLTI 234
+++T G GH D + +R P+ VE L+G QV+ G +FT +T
Sbjct: 386 VEKELYTWVNMQGGTKLHGQLGHGD--KASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443
Query: 235 RGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLE----EVGSVVQIAAGPSYMLAVTGNG 289
G ++ GS+ +G +G +D+ + P+ + P++ V Q++ G ++++ +T N
Sbjct: 444 EGQLYAFGSDYYGCMG----VDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNK 499
Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
VYS+G G LG + D P+ + K + +V V G + L SG V G
Sbjct: 500 EVYSWGCGEYGRLGLDSEEDYYTPQRVDV--PKALIIVAVQCGCDGTFLLTQSGKVLACG 557
Query: 350 KGYCGALGHGD------------EIDKTLPEPLSSLKSHLAVQVCAR-KRKTFVLVDTGS 396
LG E+ T L+ S ++ A K T + + G
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGR 617
Query: 397 VYGFGWMGFGSLGFPDRGVSDKVLRPRIL-DSLRAHHVSQISTGLYHTVVVTDRGRLFGF 455
+ FG G LG G K L +L L V ++S G T+ TD +F +
Sbjct: 618 LLTFGCNKCGQLGV---GNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAW 674
Query: 456 GDNERAQLGHDTLRGCLEPTE 476
G+ +L + PTE
Sbjct: 675 GNGGNGRLA-------MTPTE 688
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 337 VALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL-AVQVCARKRKTFVLVDTG 395
V + VY WG G K+ P+ L +KS A QVCA V+
Sbjct: 341 VVTSRTSEVYVWGGG------------KSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEK 388
Query: 396 SVYGFGWMGFGSLGFPDRGVSDKV--LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLF 453
+Y + M G+ G DK +P+ ++ L+ + Q+S G TV VTD G+L+
Sbjct: 389 ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLY 448
Query: 454 GFGDNERAQLGHDTLRG--CLEPTEI 477
FG + +G D + G LEP ++
Sbjct: 449 AFGSDYYGCMGVDKVSGPEVLEPMQL 474
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 12/283 (4%)
Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
PIF E L+ + C TAG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGTAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90
Query: 262 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
+ L +++ S+ +GP +LA T +G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147
Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 378
V+ V+ G H + L S G V+ WG G +G G ++ +P ++ L++ +
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207
Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
+ + + + +VDTG VY +G+ G G LG G R L +R V +++
Sbjct: 208 MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264
Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
G HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 126/294 (42%), Gaps = 13/294 (4%)
Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
+AGN++ TT N +F G++ G LG G + + R++ + + +
Sbjct: 53 TAGNEVLYTT--------VNDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASL 103
Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
S S H G+VFT G N+ G+ TN + + L +V G
Sbjct: 104 SYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 163
Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
+ LT G V G N GQ+G G T ++P P+ + + V+ IA G +AV
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDT 223
Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
G VY +G N LG G + QP + +GI V RV+ G H + L G +Y W
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAW 281
Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
G G LG G++ +++ P P+ K + + C + G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 3/237 (1%)
Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 232
N + + ++F G N S C G D I PR +++L G ++ G L
Sbjct: 56 NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 114
Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
++G ++ +G G ++ PR + + + V+ ++ G +A+ +G VY WG
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMSIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
G LG G ++ P +++L+ +V T VL D G +Y +G +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG 290
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 136/283 (48%), Gaps = 12/283 (4%)
Query: 204 PIFRPRLVEALKGV--PCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPK 261
PIF E L+ + C +AG N + T+ + G+N G LG GD P+
Sbjct: 32 PIFSLCSEEELQLIRQACVFGSAG-NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPR 90
Query: 262 SIAPL--EEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF 319
+ L +++ S+ +GP +LA T +G V+++G + LG+G + L P I T
Sbjct: 91 RLDSLTGKKIASL-SYGSGPHIVLATT-DGEVFTWGHNAYSQLGNGTTNHGLVPCHIST- 147
Query: 320 RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLS-SLKSHLA 378
V+ V+ G H + L S G V+ WG G +G G ++ +P ++ L++ +
Sbjct: 148 NLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVV 207
Query: 379 VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIST 438
+ + + + +VDTG VY +G+ G G LG G R L +R V +++
Sbjct: 208 MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVAC 264
Query: 439 GLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQE 481
G HT+V+TD G+++ +G N QLG PT + +++
Sbjct: 265 GYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 126/294 (42%), Gaps = 13/294 (4%)
Query: 110 SAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQV 169
SAGN++ TT N +F G++ G LG G + + R++ + + +
Sbjct: 53 SAGNEVLYTT--------VNDEIFVLGTNCSGCLGVG-DIQSTIEPRRLDSLTGKKIASL 103
Query: 170 S-ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
S S H G+VFT G N+ G+ TN + + L +V G
Sbjct: 104 SYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYH 163
Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
+ LT G V G N GQ+G G T ++P P+ + + V+ IA G +AV
Sbjct: 164 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDT 223
Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
G VY +G N LG G + QP + +GI V RV+ G H + L G +Y W
Sbjct: 224 GEVYVWGYNGNGQLGLGSSGN--QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAW 281
Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLKSH-LAVQVCARKRKTFVLVDTGSVYGFG 401
G G LG G++ +++ P P+ K + + C + G VY +G
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 3/237 (1%)
Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFL- 232
N + + ++F G N S C G D I PR +++L G ++ G L
Sbjct: 56 NEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTI-EPRRLDSLTGKKIASLSYGSGPHIVLA 114
Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
T G V T G N + QLG+G T P I+ V+++A G + L +T +G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
++G ++ +G G ++ PR + + + V+ ++ G +A+ +G VY WG
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKV-VMNIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 353 CGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
G LG G ++ P +++L+ +V T VL D G +Y +G +G LG
Sbjct: 234 NGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLG 290
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 15/300 (5%)
Query: 169 VSASENHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
+S + H A V + +++ G N+ G + T + +P V+ALK K G
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKST---VSKPTCVKALKPEKVKFAACGR 96
Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
N T T G V+ G N GQLG GDT +R T I+ + Q++AG + A+T
Sbjct: 97 NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
+G ++ +G S +G + P+ + G + +S G H + + G +Y
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLY 212
Query: 347 TWGKGYCGALGHGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
T+G+ CG LG ++ ++ +P+P+ + + VQV T VL + +VY FG
Sbjct: 213 TFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV-VQVACGGGHTVVLTEK-AVYTFGLGQ 270
Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
FG LG V P+ ++ ++ +S I+ G HT ++TD G ++ FGD +LG
Sbjct: 271 FGQLGLGTFLFETSV--PKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLG 328
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 118/247 (47%), Gaps = 18/247 (7%)
Query: 120 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINF-PSAAHVVQVSASENHAA 177
GR HTL+ + V++ G + G LG G +T + +F I+F S + Q+SA N +A
Sbjct: 95 GRNHTLVSTEGGKVYAAGGNNEGQLGLG-DTEERSTFHLISFFTSQRKIKQLSAGSNTSA 153
Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
+ + G++F GDNS G + + P+ V G P ++ G + F+T G
Sbjct: 154 ALTEDGELFMWGDNSEGQIGLENVTN-VCVPQQVTV--GKPISWISCGYYHSAFVTTEGQ 210
Query: 238 VHTCGSNTHGQLGHGDTL----DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
++T G G+LG + L P P P G VVQ+A G + + +T VY+
Sbjct: 211 LYTFGEPECGKLGLPNQLLVNHRMPQPVPGIP----GKVVQVACGGGHTVVLT-EKAVYT 265
Query: 294 FGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
FG G LG G E P+AI+ + + I + + G+ H + G +YT+G G
Sbjct: 266 FGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFI--ACGENHTALITDMGLMYTFGDGR 323
Query: 353 CGALGHG 359
G LG G
Sbjct: 324 HGKLGLG 330
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRK 387
+S GDEH + + +Y +G G LG G + + P + +LK + C R
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNH- 98
Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
T V + G VY G G LG D S R + Q+S G + +T
Sbjct: 99 TLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRK--IKQLSAGSNTSAALT 156
Query: 448 DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
+ G LF +GDN Q+G + + P ++ +
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTV 188
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 14/143 (9%)
Query: 117 ITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA---HVVQVSAS 172
I+ G YH+ ++ +++ G CG LG Q + R+ P VVQV+
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGL---PNQLLVNHRMPQPVPGIPGKVVQVACG 251
Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR---PRLVEALKGVPCKQVTAGLNFT 229
H VL V+T G G +F P+ +E +K + G N T
Sbjct: 252 GGHTV-VLTEKAVYTFGLGQ---FGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHT 307
Query: 230 GFLTIRGHVHTCGSNTHGQLGHG 252
+T G ++T G HG+LG G
Sbjct: 308 ALITDMGLMYTFGDGRHGKLGLG 330
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 11/300 (3%)
Query: 167 VQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGL 226
V +S + H+A V + +++ G N+ G + I +P V+ALK K G
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLG-LGSKSAISKPTCVKALKPEKVKLAACGR 96
Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVT 286
N T T G+V+ G N GQLG GDT +R T I+ + Q++AG + A+T
Sbjct: 97 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 287 GNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVY 346
+G ++ +G S +G + P+ + G V +S G H + + G +Y
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI----GKPVSWISCGYYHSAFVTTDGELY 212
Query: 347 TWGKGYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMG 404
+G+ G LG +++ + P+ +S + + +QV T VL + +VY FG
Sbjct: 213 VFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV-IQVACGGEHTVVLTEN-AVYTFGLGQ 270
Query: 405 FGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
FG LG + P++++++R +S IS G HT ++TD G ++ FGD +LG
Sbjct: 271 FGQLGLGTFLF--ETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLG 328
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 128/245 (52%), Gaps = 14/245 (5%)
Query: 120 GRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 177
GR HTL+ + +V++ G + G LG G +T + +F I+F ++ H + Q+SA N +A
Sbjct: 95 GRNHTLVSTEGGNVYATGGNNEGQLGLG-DTEERNTFHVISFFTSEHKIKQLSAGSNTSA 153
Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
+ + G++F GDNS G ++ + + P+ V G P ++ G + F+T G
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSN-VCVPQQVTI--GKPVSWISCGYYHSAFVTTDGE 210
Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
++ G +G+LG + L + TP+ ++ + E V+Q+A G + + +T N VY+FG
Sbjct: 211 LYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPE--KVIQVACGGEHTVVLTEN-AVYTFG 267
Query: 296 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
G LG G + +P+ I+ R + I + S G+ H + G +YT+G G G
Sbjct: 268 LGQFGQLGLGTFLFETSEPKVIENIRDQTISYI--SCGENHTALITDIGLMYTFGDGRHG 325
Query: 355 ALGHG 359
LG G
Sbjct: 326 KLGLG 330
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARK 385
V +S GDEH + + +Y +G G LG G + + P + +LK + + C R
Sbjct: 38 VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRN 97
Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV 445
T V + G+VY G G LG D + S H + Q+S G +
Sbjct: 98 H-TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTS--EHKIKQLSAGSNTSAA 154
Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
+T+ GRLF +GDN Q+G + P ++ I
Sbjct: 155 LTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI 188
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 168/397 (42%), Gaps = 57/397 (14%)
Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRIN---FPSAAHVVQVSASENHAAFVLQSGQVFT 187
+V+ GS LG G E V R+N VV ++ H+A + G+V+T
Sbjct: 72 NVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYT 131
Query: 188 CGDNSSFCCG-----HRDTNRPIFRPRLVE--------ALKGVPCKQVTAGLNFTGFLTI 234
G N + G +D N L+E AL + +V N T +T
Sbjct: 132 WGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITD 191
Query: 235 RGHVHTCGS--NTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVY 292
G T G+ + G LG+ D+ R + L E + Q+A G +++A+T G VY
Sbjct: 192 NGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPE---ICQLATGTDHIIALTTTGKVY 248
Query: 293 SFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI--------HVVRVSAGDEHVVALDSSGY 344
++G+G F LG R ++ R +G+ +++ V AG H A+D+ G
Sbjct: 249 TWGNGQQFQLGR---------RMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGR 299
Query: 345 VYTWGKGY---CGALGHGDEIDKTLPEP--LSSLKSHLAVQVCARKRKTFVLVDTGSVYG 399
VY WG CG +E + +P + +L+ + + + T L++ G V
Sbjct: 300 VYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLA 359
Query: 400 FGWMGFGSLGFPDRGVSDKVLR-----------PRILDSLRAHHVSQISTGLYHTVVVTD 448
+G LG PD + + V++ P I+ L +V Q+ G +H + VT
Sbjct: 360 WGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGL--TNVIQVVCGTHHNLAVTS 417
Query: 449 RGRLFGFGDNERAQLGH-DTLRGCLEPTEIFIQEMEE 484
G+++ +G E ++G D PT + + ++E
Sbjct: 418 DGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKE 454
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 25/184 (13%)
Query: 165 HVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG----HRDTNRPIFRPRLVEALKGVPCK 220
+++ V A H+ + G+V+ G N + CG + I +P LV+AL+G K
Sbjct: 280 NIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVK 339
Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEE------------ 268
+T G + T L G V G + QLG D P+++ E+
Sbjct: 340 SITGGEHHTLALLEDGRVLAWGRDDRHQLG---IPDNALPETVVKDEKGNNYYLSTPTII 396
Query: 269 --VGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTF-RRKGIH 325
+ +V+Q+ G + LAVT +G VYS+GS N+ +G G+ +++ A+ T R K I
Sbjct: 397 PGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDV---AVPTLVRSKAIK 453
Query: 326 VVRV 329
V +
Sbjct: 454 EVAI 457
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 100/257 (38%), Gaps = 31/257 (12%)
Query: 126 LISNSSVFSCGSSLC--GVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSG 183
+ N F+ G+ C GVLG+ + T++ P + Q++ +H + +G
Sbjct: 189 ITDNGCCFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLP---EICQLATGTDHIIALTTTG 245
Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS 243
+V+T G+ F G R R + + L V AG + + +G V+ G
Sbjct: 246 KVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGL 305
Query: 244 NTHGQLG-------HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS 296
N Q G G + +PT + E +V I G + LA+ +G V ++G
Sbjct: 306 NITRQCGIEVEDEEEGAVITKPT---LVDALEGYNVKSITGGEHHTLALLEDGRVLAWGR 362
Query: 297 GSNFCLGHGEQHDELQPRAIQTFRRKG-------------IHVVRVSAGDEHVVALDSSG 343
LG D P + + +V++V G H +A+ S G
Sbjct: 363 DDRHQLGI---PDNALPETVVKDEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDG 419
Query: 344 YVYTWGKGYCGALGHGD 360
VY+WG +G GD
Sbjct: 420 KVYSWGSAENYEVGQGD 436
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 133/297 (44%), Gaps = 9/297 (3%)
Query: 169 VSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNF 228
+S + H A V + +++ G N+ G + I +P ++ALK K G N
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLG-LGSKAAIIKPTCIKALKPEKVKLAACGRNH 98
Query: 229 TGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGN 288
T T G V+ G N GQLG GDT DR T I ++ Q++AG + A+T +
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTED 158
Query: 289 GVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTW 348
G ++ +G S +G ++ + P + G + +S G H + G +YT+
Sbjct: 159 GKLFMWGDNSEGQIGLEDKSNVCIPHEVTV----GKPISWISCGYYHSAFVTMDGELYTF 214
Query: 349 GKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
G+ G LG +E+ P L +QV T VL + VY FG FG
Sbjct: 215 GEPENGKLGLPNELLMNHRSPQRVLGIPERVIQVACGGGHTVVLTEK-VVYAFGLGQFGQ 273
Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
LG + P+I++ ++ + IS G HT ++T+ G L+ FGD +LG
Sbjct: 274 LGL--GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLG 328
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 127/247 (51%), Gaps = 14/247 (5%)
Query: 120 GRYHTLLISNSS-VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASENHAA 177
GR HTL+ +++ V++ G + G LG G +T +F +I F + A + Q+SA N +A
Sbjct: 95 GRNHTLVSTDTGGVYAAGGNNEGQLGLG-DTDDRDTFHQIVFFTPADTIKQLSAGANTSA 153
Query: 178 FVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGH 237
+ + G++F GDNS G D + + P E G P ++ G + F+T+ G
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSN-VCIPH--EVTVGKPISWISCGYYHSAFVTMDGE 210
Query: 238 VHTCGSNTHGQLGHGDTL--DRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
++T G +G+LG + L + +P+ + + E V+Q+A G + + +T VVY+FG
Sbjct: 211 LYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE--RVIQVACGGGHTVVLT-EKVVYAFG 267
Query: 296 SGSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
G LG G + +P+ I+ R K + +S G+ H + G +YT+G G G
Sbjct: 268 LGQFGQLGLGTFLFETSEPKIIE--RIKDQKICHISCGENHTALMTELGLLYTFGDGRHG 325
Query: 355 ALGHGDE 361
LG G E
Sbjct: 326 KLGLGME 332
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK-SHLAVQVCARKRK 387
+S GDEH + + +Y +G G LG G + P + +LK + + C R
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNH- 98
Query: 388 TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
T V DTG VY G G LG D D+ +I+ A + Q+S G + +T
Sbjct: 99 TLVSTDTGGVYAAGGNNEGQLGLGD--TDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 156
Query: 448 DRGRLFGFGDNERAQLGHDTLRGCLEPTEIFI 479
+ G+LF +GDN Q+G + P E+ +
Sbjct: 157 EDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV 188
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 249 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH 308
L HG L PL+ +V P + + +Y++G NF LGHG Q
Sbjct: 107 LKHGSNLYIQDKDGYTPLD----LVMKDRPPHIVFKTSDPTELYTWGDNVNFTLGHGTQQ 162
Query: 309 DELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
+ P ++ F R G+++ ++ H V L G VYT G G G LGHGDE+ +P
Sbjct: 163 SKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPR 222
Query: 369 PLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSL 428
+ L+ H QV K T VL + G VY FG F LG + V R ++
Sbjct: 223 LVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQAKTM 282
Query: 429 RAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
+ V ++ G +HTV+ T + ++ G N QLG+
Sbjct: 283 KGKTVLGVAAGRFHTVLWT-KDAVYTVGLN-GGQLGY 317
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 113/240 (47%), Gaps = 20/240 (8%)
Query: 130 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP-SAAHVVQVSASENHAAFVLQSGQVFTC 188
+ +++ G ++ LGHG + ++ FP S ++ Q+ + H+ F+ Q GQV+TC
Sbjct: 143 TELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTC 202
Query: 189 GDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
G GH D PRLVE L+G PC QV + T LT G+V+T G NT Q
Sbjct: 203 GHGQGGRLGHGD-ELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQ 261
Query: 249 LGHGDTLDRPTPKSIAPLE------EVGSVVQIAAGPSYMLAVTGNGVVYSFG-SGSNFC 301
LG + P P S P + + +V+ +AAG + + T + VY+ G +G
Sbjct: 262 LG----IQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNGGQ-- 314
Query: 302 LGHGEQHDELQ----PRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
LG+ + + + PR + K I++ VSA D V + G +Y + C L
Sbjct: 315 LGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSERGDIYLLSEYQCKKLA 374
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 110/267 (41%), Gaps = 22/267 (8%)
Query: 98 QSVEHSSDIVET---SAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCV 153
Q +H ++VE S Q+ ++H++ +S V++CG G LGHG E T C+
Sbjct: 161 QQSKHHPELVEMFPRSGVYIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELT-CL 219
Query: 154 SFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA 213
+ QV+ +++H + + G V+T G N+ G + PR ++A
Sbjct: 220 VPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFGLNTFHQLGIQPPPPNSNVPRQIQA 279
Query: 214 --LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-------PKSIA 264
+KG V AG F L + V+T G N GQLG+ L P P+ ++
Sbjct: 280 KTMKGKTVLGVAAG-RFHTVLWTKDAVYTVGLNG-GQLGY---LQDPNGEKFVSCPRQVS 334
Query: 265 PLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE--LQPRAIQTFRR 321
L ++ ++A + V+ G +Y L + + + L I +
Sbjct: 335 ALHHKDINITLVSASDGATVCVSERGDIYLLSEYQCKKLASKQLNLKKVLVSGGILEHKA 394
Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTW 348
H+ V ALD +G V+ W
Sbjct: 395 APEHLKENGGQPASVFALDQAGRVFCW 421
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 156/373 (41%), Gaps = 38/373 (10%)
Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
+F+ G++ G LG G + + +F A + V+ H+A V G +F CG N
Sbjct: 17 LFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLN 76
Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLG- 250
G T + R + + L+G P +QV G +FT LT +G V +CGSN GQLG
Sbjct: 77 KDGQLGLGHTEE-VLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135
Query: 251 -HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCLGH 304
HG P++I L E VV +AAG + LA T G V+ +G SG C G
Sbjct: 136 PHGPR-KCVVPQAIECLRE--KVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPG- 191
Query: 305 GEQHDELQPRAIQTFRRKGIH---VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
Q+ L A + R G+ V AG +H +L +G +Y WG+ G L
Sbjct: 192 --QNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLAS-RA 248
Query: 362 IDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKV 419
+ LP+ + + + V + +TG V+ +G +G LG R +
Sbjct: 249 VFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG--RRLEPPEA 306
Query: 420 LRPRILDSLRAHH---------------VSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
+P DS A ++IS G H + V R + +G NE G
Sbjct: 307 QKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVI-RDKCCSWGWNEHGMCG 365
Query: 465 HDTLRGCLEPTEI 477
T PT +
Sbjct: 366 DGTESNVWTPTPV 378
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 115/285 (40%), Gaps = 35/285 (12%)
Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 172
Q+ G T++++ V SCGS+ G LG HGP +CV I VV V+A
Sbjct: 105 QVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPR--KCVVPQAIEC-LREKVVCVAAG 161
Query: 173 ENHAAFVLQSGQVFTCG-----DNSSFCCGHRDTNRPIF----RPRLVEALKGVPCKQVT 223
HA +G VF G C G N P+F P V L+
Sbjct: 162 LRHALATTATGSVFQWGTGLASSGRRLCPGQ---NLPLFLTAKEPSRVTGLENSTAVCAV 218
Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYM 282
AG + + LT G ++ G N HGQL + P P+ I A + V + +G +++
Sbjct: 219 AGSDHSASLTDTGELYVWGRNKHGQLAS-RAVFLPLPQRIEAHYFQDEKVTAVWSGWTHL 277
Query: 283 LAVTGNGVVYSFGSGSNFCLGHG----------EQHDELQPRAIQTFRRKGIHVV----R 328
+A T G V+++G LG EQ L + Q +H +
Sbjct: 278 VAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATE 337
Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSL 373
+S G EH +A+ +WG G G G E + P P+ +L
Sbjct: 338 ISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTESNVWTPTPVQAL 381
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 8/154 (5%)
Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ-VCAR 384
+ R S E V A + ++ WG G LG G + D LP+ LS ++ V
Sbjct: 1 MARESCASETVSA---AAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGG 57
Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
+ V+ D G ++ G G LG G +++VLR I LR + Q++ G T+
Sbjct: 58 GGHSAVVTDGGDLFVCGLNKDGQLGL---GHTEEVLRFTICKPLRGCPIRQVACGWDFTI 114
Query: 445 VVTDRGRLFGFGDNERAQLG-HDTLRGCLEPTEI 477
++T++G++ G N QLG R C+ P I
Sbjct: 115 MLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAI 148
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 82/168 (48%), Gaps = 1/168 (0%)
Query: 291 VYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
VY++G +NF LGHG Q+ + P + F R GI++ +V H V L G VYT G
Sbjct: 144 VYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGH 203
Query: 351 GYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGF 410
G G LGHGDE +P + L H QV A K T VL + G VY FG F LG
Sbjct: 204 GPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLNIFHQLGI 263
Query: 411 PDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDN 458
S V R L+ + ++ G +HTV+ T R ++ G N
Sbjct: 264 IPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWT-REAVYTMGLN 310
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 24/242 (9%)
Query: 130 SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
+ V++ G + LGHG + ++ F+R S ++ QV + H+ F+ Q GQ
Sbjct: 142 TDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSR----SGIYIKQVVLCKFHSVFLSQKGQ 197
Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
V+TCG GH D + PRLVE L G C QV A + T LT G V+T G N
Sbjct: 198 VYTCGHGPGGRLGHGD-EQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFGLN 256
Query: 245 THGQLGHGDTLDRPT----PKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG--SG 297
QLG + P+ P+ I G +++ +AAG + + T VY+ G G
Sbjct: 257 IFHQLG---IIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNGG 312
Query: 298 SNFCL--GHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGA 355
CL +GE+ PR + K I + V+A D V + + G +Y C
Sbjct: 313 QLGCLLDPNGEKC-VTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLADYQCKK 371
Query: 356 LG 357
+
Sbjct: 372 MA 373
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 21/247 (8%)
Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
Q+ ++H++ +S V++CG G LGHG E T C+ + + + QV+A+++
Sbjct: 181 QVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQT-CLVPRLVEGLNGHNCSQVAAAKD 239
Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 232
H + + G V+T G N G PR ++A LKG V AG F L
Sbjct: 240 HTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAG-RFHTVL 298
Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQ-------IAAGPSYMLAV 285
R V+T G N GQLG LD K + +V ++ +AA + V
Sbjct: 299 WTREAVYTMGLNG-GQLGC--LLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCV 355
Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAI----QTFRRKGIHVVRVSAGDEHVVALDS 341
T G +Y C + L+ + ++ H+ ++A+D
Sbjct: 356 TTRGDIYLLADYQ--CKKMASKQLNLKKVLVSGGHMEYKVDPEHLKENGGQKICILAMDG 413
Query: 342 SGYVYTW 348
+G V+ W
Sbjct: 414 AGRVFCW 420
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 109/207 (52%), Gaps = 4/207 (1%)
Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
++Q++ + H+ + + G++F G N G P++VE L GVP Q++AG
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAV 285
+ L++ G++++ G N GQLG G T + P I L+ V +A G S+ +
Sbjct: 200 EAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDN-QKVEFVACGGSHSALL 258
Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS-GY 344
T +G++++FG+G + LGH +EL+P + G V +++ G H +A S G
Sbjct: 259 TQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELV--GYRVTQIACGRWHTLAYVSDLGK 316
Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLS 371
V+++G G G LG+G D+ +P P+
Sbjct: 317 VFSFGSGKDGQLGNGGTRDQLMPLPVK 343
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQH-DELQPRAIQTFRRKGIHVVRV 329
++QI G + LA++ G ++++G + LG G + P+ ++ G+ + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHL--AGVPLAQI 196
Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
SAG+ H +AL SG +Y+WGK CG LG G K P + L + V +
Sbjct: 197 SAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSA 256
Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVV-VTD 448
+L G ++ FG G LG + LRP ++ L + V+QI+ G +HT+ V+D
Sbjct: 257 LLTQDGLLFTFGAGKHGQLG---HNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD 313
Query: 449 RGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
G++F FG + QLG+ R L P + + EE
Sbjct: 314 LGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEE 349
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 117/241 (48%), Gaps = 10/241 (4%)
Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
+QIT G YH+L +S +F+ G +L G LG G + + + + + Q+SA E
Sbjct: 141 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 174 NHAAFVLQSGQVFTCGDNS--SFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGF 231
H+ + SG +++ G N GH ++ P L+E L + V G + +
Sbjct: 201 AHSMALSMSGNIYSWGKNECGQLGLGHTESKD---DPSLIEGLDNQKVEFVACGGSHSAL 257
Query: 232 LTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAAGPSYMLA-VTGNG 289
LT G + T G+ HGQLGH T + P +A L VG V QIA G + LA V+ G
Sbjct: 258 LTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL--VGYRVTQIACGRWHTLAYVSDLG 315
Query: 290 VVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
V+SFGSG + LG+G D+L P ++ + + + ++ E ++ + + W
Sbjct: 316 KVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAGGNQSILLWI 375
Query: 350 K 350
K
Sbjct: 376 K 376
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 221 QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAP--LEEVGSV--VQIA 276
Q+T G + L+ G + G N HGQLG G R P + P +E + V QI+
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGVG----RKFPSTTTPQIVEHLAGVPLAQIS 197
Query: 277 AGPSYMLAVTGNGVVYSFGSGS--NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
AG ++ +A++ +G +YS+G LGH E D+ P I+ + + V+ G
Sbjct: 198 AGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKVEF--VACGGS 253
Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV-CARKRKTFVLVD 393
H L G ++T+G G G LGH ++ P ++ L + Q+ C R + D
Sbjct: 254 HSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSD 313
Query: 394 TGSVYGFGWMGFGSLGFPDRGVSDKVL 420
G V+ FG G LG + G D+++
Sbjct: 314 LGKVFSFGSGKDGQLG--NGGTRDQLM 338
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVS 330
++ ++ G + +T G++ +FGSGSN CLGHG +D QP+ ++ G +V+VS
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALL--GYELVQVS 456
Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFV 390
G HV+A+ + V++WG+G G LG + P+ +S A +V + +
Sbjct: 457 CGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGVDCSMI 516
Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDK---------VLRPRILDS--LRAHHVSQISTG 439
+ + G F LG +++ V +++ S L + I G
Sbjct: 517 MSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIG 576
Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
H+V VT++G+ F FG N+ QLG R P ++
Sbjct: 577 TAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQV 614
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 38/277 (13%)
Query: 122 YHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VVQVSASENH 175
+ T L + + GS G LGHG +F + P +VQVS +H
Sbjct: 409 FTTCLTDRGIIMTFGSGSNGCLGHG-------NFNDVTQPKIVEALLGYELVQVSCGASH 461
Query: 176 AAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
V +VF+ G DN +D++ P+ V ++V G++ + ++
Sbjct: 462 VLAVTNEREVFSWGRGDNGRLGLATQDSHNC---PQQVSLPADFEAQRVLCGVDCSMIMS 518
Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEV-------------GSVVQIAAGPS 280
+ + CG+N +LG P S +EEV +V I G +
Sbjct: 519 TQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTA 578
Query: 281 YMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA-GDEHVVAL 339
+ +AVT G ++FGS + LG + P ++ G+ + ++A GD +A+
Sbjct: 579 HSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVP-----YQVSGLQGITMAACGDAFTLAI 633
Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSH 376
+ G VYTWGKG G LG +E D +P+P+ +SH
Sbjct: 634 GAEGEVYTWGKGARGRLGRKEE-DFGIPKPVQLDESH 669
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 272 VVQIAAGPSYMLAVTGNGVVYSF-----GSGSNFCLGHGEQHDELQPRAIQTFR--RKGI 324
V+Q++ G + + VT +G + ++ GSG G EQ +QP+ I F + G+
Sbjct: 342 VIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQ---MQPQFISRFLEGQSGV 398
Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
+ VS GD L G + T+G G G LGHG+ D T P+ + +L + VQV
Sbjct: 399 TIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCG 458
Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
+ + V+ +G G LG D P+ + ++ G+ ++
Sbjct: 459 ASHVLAVTNEREVFSWGRGDNGRLGL---ATQDSHNCPQQVSLPADFEAQRVLCGVDCSM 515
Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPT 475
+++ + ++ G+N +LG D + G EP+
Sbjct: 516 IMSTQHQILACGNNRFNKLGLDKVSGTEEPS 546
>sp|Q54Q89|RCCDC_DICDI RCC1 repeat-containing protein DDB_G0284033 OS=Dictyostelium
discoideum GN=DDB_G0284033 PE=4 SV=2
Length = 487
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 162/391 (41%), Gaps = 44/391 (11%)
Query: 130 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFP---------SAAHVVQVSASENHAAFV- 179
+ V+S GS L G LGHG + T+ V I + + ++++ ++ F
Sbjct: 67 NKVYSWGSGLNGKLGHGLDETKIVVPKEIEIKEDDDNNRVFNQGKINKITSGTTYSIFSG 126
Query: 180 ---LQSGQVFT-CGDN--SSFCCGHRDT----NRPIFRPRLVEA--LKGVPCKQVTAGLN 227
++ QVF CGDN + G+ N + ++++ +KG KQ+ +G
Sbjct: 127 YDQIKDRQVFYGCGDNRDAQLIVGNGKIQSLENIELLESPMLKSDQMKGKQLKQLISGTY 186
Query: 228 FTGFLTI-------------RGHVHTCGSNTHGQLGHGD-TLDRPTPKSIAPLEEVGSVV 273
+ R + G++ GQ+G + + P + L E+G +
Sbjct: 187 HNACILNDSNSNNNNNNNKDRSLILLWGASNSGQIGSPEYNRVQYDPYNNKVLSEIG-IK 245
Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
+I+ G ++ +A++ +G +YSFGS + LG+G+ +E +P+ I + ++ + G
Sbjct: 246 KISMGATFTIALSNDGKLYSFGSSTFNELGNGDMFNEREPKLIDNQLLQDNEIIDLECGF 305
Query: 334 EHVVALDSSGYVYTWGKG---YCGALGHGD---EIDKTLPEPLSSLKSH-LAVQVCARKR 386
H VAL S + TWG+ C + G SSL H +Q+ A
Sbjct: 306 FHTVALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDKIIQIGASNL 365
Query: 387 KTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
+++L + G++Y G G G +L + V + + +V
Sbjct: 366 NSYILTENGNIYSIGSNDHGQCGIEKSNFKKGILNKIKIGDDGNIKVKKFYSRFKTVIVE 425
Query: 447 TDRGRLFGFGDNERAQLGHDTLRGCLEPTEI 477
T GR FG+G N QL +T P E+
Sbjct: 426 TTDGRFFGWGSNFDHQLALETRCIYFTPMEL 456
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 78/189 (41%), Gaps = 18/189 (9%)
Query: 115 MQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAA------HVV 167
+ + G +HT+ L S++ + + G + PE T SFT + + + ++
Sbjct: 299 IDLECGFFHTVALTSDNKILTWGRNQESQCFPVPEGTGKGSFTNVQYLDTSSLGDHDKII 358
Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK-----GVPCKQV 222
Q+ AS ++ + ++G +++ G N CG +N F+ ++ +K + K+
Sbjct: 359 QIGASNLNSYILTENGNIYSIGSNDHGQCGIEKSN---FKKGILNKIKIGDDGNIKVKKF 415
Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG---SVVQIAAGP 279
+ T G GSN QL TP + L + +++ I+
Sbjct: 416 YSRFKTVIVETTDGRFFGWGSNFDHQLALETRCIYFTPMELNNLNRLHKDYNIIDISISL 475
Query: 280 SYMLAVTGN 288
S+ +++ N
Sbjct: 476 SHCISLNSN 484
>sp|Q6ZPR6|IBTK_MOUSE Inhibitor of Bruton tyrosine kinase OS=Mus musculus GN=Ibtk PE=1
SV=3
Length = 1352
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 105/218 (48%), Gaps = 8/218 (3%)
Query: 249 LGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYML-AVTGNGVVYSFGSGSNFCLGHGEQ 307
L HG +L + ++PL+ + + P++++ T VY++G +NF LGHG Q
Sbjct: 106 LKHGVSLYMQDKEGLSPLD-----LLMKDRPTHVVFKDTDPTEVYTWGDNTNFTLGHGSQ 160
Query: 308 HDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
+ + P + F R G++V +V H V L G VYT G G G LGHGDE +P
Sbjct: 161 NSKHHPELLDLFSRSGVYVKQVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVP 220
Query: 368 EPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS 427
+ L H QV A K T VL D G VY FG F LG S V R
Sbjct: 221 RLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKY 280
Query: 428 LRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGH 465
L+ + ++ G +HTV+ T R ++ G N QLGH
Sbjct: 281 LKGRTIIGVAAGRFHTVLWT-REAVYTLGLN-GGQLGH 316
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 108/244 (44%), Gaps = 28/244 (11%)
Query: 130 SSVFSCGSSLCGVLGHGPETTQ-----CVSFTRINFPSAAHVVQVSASENHAAFVLQSGQ 184
+ V++ G + LGHG + ++ F+R S +V QV + H+ F+ Q GQ
Sbjct: 142 TEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSR----SGVYVKQVVLCKFHSVFLSQKGQ 197
Query: 185 VFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSN 244
V+TCG GH D + PRLVE L G C QV A + T LT G V+T G N
Sbjct: 198 VYTCGHGRGGRLGHGD-EQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDDGCVYTFGLN 256
Query: 245 THGQLGHGDTLDRP----TPKSIAPLEEVG-SVVQIAAGPSYMLAVTGNGVVYSFG-SGS 298
QLG + P P+ I G +++ +AAG + + T VY+ G +G
Sbjct: 257 MFHQLG---IIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTLGLNGG 312
Query: 299 NFCLGH-----GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYC 353
LGH GE+ PR + K I V V+A D V + + G +Y C
Sbjct: 313 Q--LGHLLDPNGEKC-VTTPRQVSALHHKDIAVSLVAASDGATVCVTTRGDIYLLADYQC 369
Query: 354 GALG 357
+
Sbjct: 370 KKMA 373
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 21/247 (8%)
Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASEN 174
Q+ ++H++ +S V++CG G LGHG E T C+ + S + QV+A+++
Sbjct: 181 QVVLCKFHSVFLSQKGQVYTCGHGRGGRLGHGDEQT-CLVPRLVEGLSGHNCSQVAAAKD 239
Query: 175 HAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEA--LKGVPCKQVTAGLNFTGFL 232
H + G V+T G N G PR ++A LKG V AG F L
Sbjct: 240 HTVVLTDDGCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAG-RFHTVL 298
Query: 233 TIRGHVHTCGSNTHGQLGHGDTLDR------PTPKSIAPLEEVGSVVQ-IAAGPSYMLAV 285
R V+T G N GQLGH LD TP+ ++ L V +AA + V
Sbjct: 299 WTREAVYTLGLNG-GQLGH--LLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATVCV 355
Query: 286 TGNGVVYSFGSGSNFCLGHGEQHDELQPRAI----QTFRRKGIHVVRVSAGDEHVVALDS 341
T G +Y C + L+ + ++ H+ V+A+D
Sbjct: 356 TTRGDIYLLADYQ--CKKMATKQLNLKKVLVSGGCMEYKVDPEHLTENGGQKICVLAMDG 413
Query: 342 SGYVYTW 348
+G V+ W
Sbjct: 414 AGRVFCW 420
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 122/263 (46%), Gaps = 27/263 (10%)
Query: 233 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
T+ G V T G GQLG G D ++R P + E++ VQ AAG + + + +G +
Sbjct: 38 TVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDI---VQAAAGGMHTVCLGASGSI 94
Query: 292 YSFGSGSNFCLGH--GEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
Y+FG LG E+ E+QP ++ + VV+VSAGD H AL G V+ +G
Sbjct: 95 YTFGCNDEGALGRDTSEEGSEMQPGKVELAEK----VVQVSAGDSHTAALTEDGRVFVFG 150
Query: 350 --KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
+ G +G + + K++ P+ + +++ + +L G +Y G G
Sbjct: 151 SFRDNNGVIGLLEPMKKSMV-PVQVQINTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQ 209
Query: 408 LG-----FPDRGVS---DKVLRPRILDSLRAH-----HVSQISTGLYHTVVVTDRGRLFG 454
LG F +RG +++L P+ + L+A H + G Y T V+ G ++G
Sbjct: 210 LGRVPERFTNRGGRKGLERLLVPQCIH-LKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYG 268
Query: 455 FGDNERAQLGHDTLRGCLEPTEI 477
FG + QLG + C P +
Sbjct: 269 FGLSNYHQLGTKNTQACYAPQNL 291
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 135/323 (41%), Gaps = 45/323 (13%)
Query: 183 GQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCG 242
GQV T G G + +P LV + + Q AG T L G ++T G
Sbjct: 41 GQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDIV--QAAAGGMHTVCLGASGSIYTFG 98
Query: 243 SNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGS--GSNF 300
N G LG DT + + +E VVQ++AG S+ A+T +G V+ FGS +N
Sbjct: 99 CNDEGALGR-DTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTEDGRVFVFGSFRDNNG 157
Query: 301 CLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
+G E + P +Q V+++++G++H+V L G +YT G G G LG
Sbjct: 158 VIGLLEPMKKSMVPVQVQI----NTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGR- 212
Query: 360 DEIDKTLPEPLSS------LKSHLAVQVCARKRK----------------TFVLVDTGSV 397
+PE ++ L+ L Q K K TF + G V
Sbjct: 213 ------VPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHV 266
Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI--STGLYHTVVVTDRGRLFGF 455
YGFG + LG + + P+ L S + S I S G +HTV V G+ +
Sbjct: 267 YGFGLSNYHQLGTKN---TQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSL 323
Query: 456 GDNERAQLG-HDTLRGCLEPTEI 477
G E +LG + EPT I
Sbjct: 324 GRAEYGRLGLGENAEEQSEPTPI 346
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 153/371 (41%), Gaps = 44/371 (11%)
Query: 103 SSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPS 162
+ DIV+ +AG G + L ++ S+++ G + G LG + +
Sbjct: 72 TEDIVQAAAG-------GMHTVCLGASGSIYTFGCNDEGALGR-DTSEEGSEMQPGKVEL 123
Query: 163 AAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALK 215
A VVQVSA ++H A + + G+VF G SF RD N P+ + + V+
Sbjct: 124 AEKVVQVSAGDSHTAALTEDGRVFVFG---SF----RDNNGVIGLLEPMKKSMVPVQVQI 176
Query: 216 GVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAP 265
P ++ +G + LT+ G ++T G GQLG L+R
Sbjct: 177 NTPVIKIASGNDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIH 236
Query: 266 LEEVGS----VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRR 321
L+ GS + G + AV+ G VY FG + LG P+ + +F+
Sbjct: 237 LKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKN 296
Query: 322 KGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQ 380
+ S G H V +DS G Y+ G+ G LG G+ +++ P P+ L +V
Sbjct: 297 STKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPKINSVA 356
Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDS--LRAHHVSQIST 438
A ++ + G V+ +G LG G + V P + L V +S+
Sbjct: 357 SGA--SVSYAVSTDGCVFAWGMGTNLQLG---TGEEEDVWSPEQMTGKHLEDREVLSVSS 411
Query: 439 GLYHTVVVTDR 449
G HTV++ +
Sbjct: 412 GGQHTVLLVRK 422
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 126/264 (47%), Gaps = 36/264 (13%)
Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP--TP-KSI--APLEEVGSVVQ 274
+++T G + +T G + CG N GQLG G T D P TP KS+ P++ Q
Sbjct: 52 RRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYFTPCKSLFGCPIQ------Q 105
Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNFCLG--HGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
+A G + + +T NG V S GS S LG HG + + P+AI+ + K VV ++AG
Sbjct: 106 VACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRC-VVPQAIELHKEK---VVCIAAG 161
Query: 333 DEHVVALDSSGYVYTWGKGY--CG---ALGHGDEIDKTLPEP--LSSLKSHLAVQVCARK 385
H VA +SG V+ WG G CG G + T EP ++ L++ A+ V A
Sbjct: 162 LRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGS 221
Query: 386 RKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAH-----HVSQISTGL 440
+ L D G VY +G G L ++ P + + AH V+ I +G
Sbjct: 222 DHSASLTDAGEVYVWGSNKHGQL------ANEAAFLP-VPQKIEAHCFQNEKVTAIWSGW 274
Query: 441 YHTVVVTDRGRLFGFGDNERAQLG 464
H V T+ G++F +G + QLG
Sbjct: 275 THLVAQTETGKMFTWGRADYGQLG 298
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 124/270 (45%), Gaps = 34/270 (12%)
Query: 159 NFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSS--FCCGHRDTNRPIFRPRLVEALKG 216
+F V +++ H+A V G +F CG N GH + + P F P ++L G
Sbjct: 44 DFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTE-DIPYFTP--CKSLFG 100
Query: 217 VPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQI 275
P +QV G +FT LT G V +CGSN+ GQLG R P++I +E VV I
Sbjct: 101 CPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELHKE--KVVCI 158
Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFC---LGHGEQHDELQPRAIQTFRRKGIHVVR---V 329
AAG + +A T +G+V+ +G+G C L G Q L A + R G+ + V
Sbjct: 159 AAGLRHAVAATASGIVFQWGTGLASCGRRLCPG-QTLPLFFTAKEPSRVTGLENSKAMCV 217
Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
AG +H +L +G VY WG G L + LP P +++H C + K
Sbjct: 218 LAGSDHSASLTDAGEVYVWGSNKHGQLANEAAF---LPVP-QKIEAH-----CFQNEKVT 268
Query: 390 VL----------VDTGSVYGFGWMGFGSLG 409
+ +TG ++ +G +G LG
Sbjct: 269 AIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 123/285 (43%), Gaps = 31/285 (10%)
Query: 116 QITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSAS 172
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 105 QVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHGPR--RCVVPQAIEL-HKEKVVCIAAG 161
Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHR---DTNRPIF----RPRLVEALKGVPCKQVTAG 225
HA SG VF G + C G R P+F P V L+ V AG
Sbjct: 162 LRHAVAATASGIVFQWGTGLASC-GRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 220
Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSI-APLEEVGSVVQIAAGPSYMLA 284
+ + LT G V+ GSN HGQL + + P P+ I A + V I +G ++++A
Sbjct: 221 SDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVA 279
Query: 285 VTGNGVVYSFGSGSNFCLGHG---------EQHDEL-----QPRAIQTFRRKGIHVVRVS 330
T G ++++G LG E+ D P ++ + VS
Sbjct: 280 QTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATEVS 339
Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKS 375
G EH +A+ G Y+WG G G G E + P+P+ +L S
Sbjct: 340 CGSEHNLAI-IGGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLS 383
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 4/155 (2%)
Query: 302 LGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDE 361
LG G + D L P+ + F K V R++ G H + G ++ G G LG G
Sbjct: 28 LGLGHKEDVLLPQQLNDFC-KPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHT 86
Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
D P SL QV T +L + G V G FG LG P + +
Sbjct: 87 EDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGSNSFGQLGVPHG--PRRCVV 144
Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
P+ ++ L V I+ GL H V T G +F +G
Sbjct: 145 PQAIE-LHKEKVVCIAAGLRHAVAATASGIVFQWG 178
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 103/265 (38%), Gaps = 34/265 (12%)
Query: 98 QSVE-HSSDIVETSAGNQMQITTGRYHTLLISNSSVFSCGSSLCGVLGHGPETTQCVSFT 156
Q++E H +V +AG + + + + + SCG LC P T + FT
Sbjct: 146 QAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLC------PGQTLPLFFT 199
Query: 157 -----RINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLV 211
R+ + + V A +H+A + +G+V+ G N + P+ P+ +
Sbjct: 200 AKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPV--PQKI 257
Query: 212 EA--LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHG---------DTLDRPTP 260
EA + + +G T G + T G +GQLG + D P
Sbjct: 258 EAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLP 317
Query: 261 KSIAPLEEVGS------VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPR 314
S P S +++ G + LA+ G GV YS+G + G G + + P+
Sbjct: 318 CSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPK 376
Query: 315 AIQTFRRKGIHVVRVSAGDEHVVAL 339
+Q +V AG H +AL
Sbjct: 377 PVQALLSSSGLLVGCGAG--HSLAL 399
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 143/348 (41%), Gaps = 33/348 (9%)
Query: 123 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
H+L+I+ ++S G + G LGHG +T + + I +V + NH + +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHG-DTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTE 192
Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
+G V+T G+N G + + P ++ G P +V G F+ + +G++++
Sbjct: 193 NGTVYTFGENKLGQLGQGNQTDAVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSF 251
Query: 242 GSNTHGQLGH---GDTLDRPT---------PKSIAPLEE---------VGSVV--QIAAG 278
G +GQLGH G + R P+ +A E V +VV +A G
Sbjct: 252 GCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACG 311
Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ G + A
Sbjct: 312 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFA 371
Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
L G ++ WG + + P+ + L + K V D ++
Sbjct: 372 LSEMGGLFFWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADDSTIS 425
Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVV 446
FG LG+ D + +L + Q+ G H++V+
Sbjct: 426 WGPSPTFGELGYGDNKPKSSTTAQEV-KTLDGVYSEQVVMGYSHSLVI 472
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 335 HVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDT 394
H + + + G +++WG+ G LGHGD P+ + L + V + T L +
Sbjct: 134 HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTEN 193
Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFG 454
G+VY FG G LG ++ +D VL P + + +++ G +++V +G L+
Sbjct: 194 GTVYTFGENKLGQLGQGNQ--TDAVLSPATI-QYNGQPIVKVACGAEFSMIVDCKGNLYS 250
Query: 455 FGDNERAQLGHDT 467
FG E QLGH++
Sbjct: 251 FGCPEYGQLGHNS 263
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 25/223 (11%)
Query: 275 IAAGP--SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAG 332
+ +GP ++ L +T G ++S+G LGHG+ P+ I+ + I V + G
Sbjct: 126 VVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVI--VAAACG 183
Query: 333 DEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLV 392
H +AL +G VYT+G+ G LG G++ D L V+V + ++
Sbjct: 184 RNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMIVD 243
Query: 393 DTGSVYGFGWMGFGSLGFPDRGV---------SDKVLRPR----ILDSLRAHHV------ 433
G++Y FG +G LG G D L PR ++ + V
Sbjct: 244 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNV 303
Query: 434 --SQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
++ G HT+V+ + R+F +G +LGH + + P
Sbjct: 304 VARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 346
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 151/377 (40%), Gaps = 42/377 (11%)
Query: 130 SSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
+++F+ G++ G LG G + + +F + + +++ H+A V G +F CG
Sbjct: 15 AALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCG 74
Query: 190 DNSSFCCGHRDTNRPI-FRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ 248
N G T + F P ++L G +QV G +FT LT G V +CGSN+ GQ
Sbjct: 75 LNKDGQLGLGHTEEVLYFTP--CKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQ 132
Query: 249 LGHGDTLDRPT-PKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG-----SGSNFCL 302
LG R P++I L E VV IAAG + LA T +G V+ +G SG C
Sbjct: 133 LGVPHGPRRCVIPQAIELLRE--KVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCP 190
Query: 303 GHGEQHDELQPRAIQTFRRKGI---HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG 359
G Q L A + G+ V V AG +H +L +G +Y WG G L
Sbjct: 191 G---QTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQLASQ 247
Query: 360 DEIDKTLPEPLSS--LKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG-------- 409
LP+ + + ++ V + TG V+ +G +G LG
Sbjct: 248 AAF-LLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREG 306
Query: 410 ---------FPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNER 460
P G P L L ++IS G H + V G +G NE
Sbjct: 307 WESEKQDPSLPGSGPQKGT--PSCLPCLTG--ATEISCGSEHNLAVIG-GVCHSWGWNEH 361
Query: 461 AQLGHDTLRGCLEPTEI 477
G T P +
Sbjct: 362 GMCGDGTEADVWAPKPV 378
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 120/293 (40%), Gaps = 33/293 (11%)
Query: 115 MQITTGRYHTLLIS-NSSVFSCGSSLCGVLG--HGPETTQCVSFTRINFPSAAHVVQVSA 171
Q+ G T++++ N V SCGS+ G LG HGP +CV I VV ++A
Sbjct: 104 QQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPR--RCVIPQAIEL-LREKVVSIAA 160
Query: 172 SENHAAFVLQSGQVFTCG-----DNSSFCCGHRDTNRPIF----RPRLVEALKGVPCKQV 222
HA SG VF G C G P+F P V L+ V
Sbjct: 161 GLRHALAATASGTVFQWGTGLASSGRRLCPGQ---TLPLFLTAKEPSTVTGLENSQAVCV 217
Query: 223 TAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
AG + + LT G ++ GSN HGQL + A + + + +G +++
Sbjct: 218 LAGSDHSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHL 277
Query: 283 LAVTGNGVVYSFGSGSNFCLG------HGEQHDELQPRAIQTFRRKGIH--------VVR 328
+A T G V+++G LG G + ++ P + +KG
Sbjct: 278 VAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATE 337
Query: 329 VSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQV 381
+S G EH +A+ G ++WG G G G E D P+P+ L+ L + V
Sbjct: 338 ISCGSEHNLAV-IGGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHV 389
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 158/388 (40%), Gaps = 42/388 (10%)
Query: 99 SVEHSSDIVETSAGNQMQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTR 157
S + SD ++ G +IT G H+ ++++ S+F CG + G LG G T + + FT
Sbjct: 38 SAQQLSDFCKS--GCIKRITGGGGHSAVVTDEGSLFVCGLNKDGQLGLG-HTEEVLYFTP 94
Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGV 217
+ QV+ + + ++GQV +CG NS G R P+ +E L+
Sbjct: 95 CKSLLGCAIQQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIELLR-E 153
Query: 218 PCKQVTAGLNFTGFLTIRGHVHTCG---SNTHGQLGHGDTLD----RPTPKSIAPLEEVG 270
+ AGL T G V G +++ +L G TL P ++ LE
Sbjct: 154 KVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQ 213
Query: 271 SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDE----LQPRAIQTFRRKGIHV 326
+V + AG + ++T G +Y +GS HG+ + L P+ I+ + +
Sbjct: 214 AVC-VLAGSDHSASLTDAGELYVWGSNK-----HGQLASQAAFLLLPQRIEARCFQNEKI 267
Query: 327 VRVSAGDEHVVALDSSGYVYTWGKGYCGALG---------HGDEIDKTLP--EPLSSLKS 375
V +G H+VA +G V+TWG+ G LG ++ D +LP P S
Sbjct: 268 AAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPS 327
Query: 376 HL-----AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRA 430
L A ++ ++ G + +GW G G G V P+ + LR
Sbjct: 328 CLPCLTGATEISCGSEHNLAVIG-GVCHSWGWNEHGMCG---DGTEADVWAPKPVPGLRF 383
Query: 431 HHVSQISTGLYHTVVVTDRGRLFGFGDN 458
+ G H++ + L G +
Sbjct: 384 FLGLHVGCGAGHSLALCQLPALPALGQH 411
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 4/178 (2%)
Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
P AV ++++G+ S LG G + D L + + F + G + R++ G H
Sbjct: 5 PHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGC-IKRITGGGGHSAV 63
Query: 339 LDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVY 398
+ G ++ G G LG G + P SL QV T +L + G V
Sbjct: 64 VTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVL 123
Query: 399 GFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFG 456
G FG LG P + + P+ ++ LR VS I+ GL H + T G +F +G
Sbjct: 124 SCGSNSFGQLGVPHG--PRRCVIPQAIELLREKVVS-IAAGLRHALAATASGTVFQWG 178
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 159/381 (41%), Gaps = 49/381 (12%)
Query: 132 VFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDN 191
V + G G LG G + ++ P VVQ A H + +SGQV++ G N
Sbjct: 37 VLTLGQGDVGQLGLGENVMERKKPALVSIPE--DVVQAEAGGMHTVCLSKSGQVYSFGCN 94
Query: 192 SSFCCGHRDTNRPIFRPRLVEALKGVPCK--------QVTAGLNFTGFLTIRGHVHTCGS 243
G RDT+ VE + VP K QV+AG + T LT G V GS
Sbjct: 95 DEGALG-RDTS--------VEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGS 145
Query: 244 --NTHGQLGHGDTLDRPTPKSIAPLE---EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGS 298
+ +G +G L P KS+ P++ +V VV++A+G +++ +T +G +Y+ G G
Sbjct: 146 FRDNNGVIG----LLEPMKKSMVPVQVQLDV-PVVKVASGNDHLVMLTADGDLYTLGCGE 200
Query: 299 NFCLGH---------GEQHDE--LQPRAIQTFRRKGIHVVRVS---AGDEHVVALDSSGY 344
LG G Q E L P+ + R VR G A+ G+
Sbjct: 201 QGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGH 260
Query: 345 VYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGW 402
VY +G LG +P+ L+S K+ V + T + G Y G
Sbjct: 261 VYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR 320
Query: 403 MGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQ 462
+G LG + G +K + P ++ L A VS ++ G VT GR+F +G Q
Sbjct: 321 AEYGRLGLGE-GAEEKSI-PTLISRLPA--VSSVACGASVGYAVTKDGRVFAWGMGTNYQ 376
Query: 463 LGHDTLRGCLEPTEIFIQEME 483
LG P E+ +++E
Sbjct: 377 LGTGQDEDAWSPVEMMGKQLE 397
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 26/263 (9%)
Query: 233 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
T G V T G GQLG G+ ++R P ++ E+V VQ AG + + ++ +G V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV---VQAEAGGMHTVCLSKSGQV 88
Query: 292 YSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
YSFG LG + E+ P ++ + VV+VSAGD H AL G V+ WG
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEK----VVQVSAGDSHTAALTDDGRVFLWG 144
Query: 350 --KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
+ G +G + + K++ P+ V+V + +L G +Y G G
Sbjct: 145 SFRDNNGVIGLLEPMKKSMV-PVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQ 203
Query: 408 LG-----FPDRGVS---DKVLRPR--ILDSL--RAHHVSQIS-TGLYHTVVVTDRGRLFG 454
LG F +RG +++L P+ +L S R H Q + G Y T ++ G ++G
Sbjct: 204 LGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYG 263
Query: 455 FGDNERAQLGHDTLRGCLEPTEI 477
FG + QLG C P +
Sbjct: 264 FGLSNYHQLGTPGTESCFIPQNL 286
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 145/358 (40%), Gaps = 39/358 (10%)
Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
+Q G HT+ +S S V+S G + G LG + + VVQVSA +
Sbjct: 70 VQAEAGGMHTVCLSKSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGD 128
Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALKGVPCKQVTAGL 226
+H A + G+VF G SF RD N P+ + + V+ VP +V +G
Sbjct: 129 SHTAALTDDGRVFLWG---SF----RDNNGVIGLLEPMKKSMVPVQVQLDVPVVKVASGN 181
Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAPLEEVGSVVQIA 276
+ LT G ++T G GQLG L+R L+ GS +
Sbjct: 182 DHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVR 241
Query: 277 -----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
G + A++ G VY FG + LG P+ + +F+ V S
Sbjct: 242 FQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSG 301
Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFV 390
G H V +DS G Y+ G+ G LG G+ +K++P +S L + +V A +
Sbjct: 302 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGA--SVGYA 359
Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVV 446
+ G V+ +G LG G + P + L V +S+G HTV++
Sbjct: 360 VTKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLL 414
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
I K P ++ V+V R T + G V G G LG + + K +
Sbjct: 6 IAKRRSPPADAIPKSKKVKVSHRSHST----EPGLVLTLGQGDVGQLGLGENVMERK--K 59
Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGC-LEPTEIFI 479
P ++ V Q G HTV ++ G+++ FG N+ LG DT + G + P ++ +
Sbjct: 60 PALVSI--PEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL 117
Query: 480 QE 481
QE
Sbjct: 118 QE 119
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 126/297 (42%), Gaps = 54/297 (18%)
Query: 116 QITTGRYHTLLI-SNSSVFSCGSSLCGVLGHG--PETTQCVSFTRINFPSAAHVVQVSAS 172
+I G++H+ I S+ S+++ G + G LGHG + Q V TR+N V Q++
Sbjct: 831 KIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVP-TRVN-GLICKVTQIACG 888
Query: 173 ENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF--RPRLVEALKGVPCKQVTAGLNFTG 230
H + +G+V CG S G D + +F P + L+ + + +
Sbjct: 889 RAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR---VRDIATHYYHSI 945
Query: 231 FLTIRGHVHTCGSNTH--------------GQLGHGDTLDRPTPKSIA------------ 264
+T V G N QL + + P+P +
Sbjct: 946 CITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAE 1005
Query: 265 -PLEEVG----------SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQP 313
P E++G ++V +A G S+ +T G +Y++G G ++ LGHG +++ ++P
Sbjct: 1006 IPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEP 1065
Query: 314 RAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK---GYCGAL--GHGDEIDKT 365
Q F G V VS G+ H +A G V+ WGK G CG L +G+ D T
Sbjct: 1066 H--QVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCGVLTKKNGNSADVT 1120
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 147/360 (40%), Gaps = 68/360 (18%)
Query: 101 EHSSDIVETSAGNQMQITTGRYHTLLISNSSVFSC--GSSL--CGVLGHGPETTQCVSFT 156
+H ++E G I G H L++S+S S G+ CGV GH + + +
Sbjct: 765 QHLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGV-GH---SFRIANLH 820
Query: 157 RIN--FPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH--RDTNRPIFRPRLVE 212
+++ +P+ + +++ + H+AF+ G ++T G GH R+ + + R+
Sbjct: 821 QVDGDWPA---IEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRV-- 875
Query: 213 ALKGVPCK--QVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRP---TPKSIAPLE 267
G+ CK Q+ G T LT G V CGS ++GQ+G D + + TP + PL
Sbjct: 876 --NGLICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR 933
Query: 268 EVGSVVQIAAGPSYMLAVTGNGVVYSFG-------------------------------- 295
V IA + + +T + V+ +G
Sbjct: 934 ----VRDIATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSP 989
Query: 296 --SGS----NFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
+GS N L ++L R ++ F I V V+ G H + S G +YTWG
Sbjct: 990 STNGSTPRVNLNLPAEIPREDLGLREVKHFLDGNI--VSVACGLSHSALITSEGTLYTWG 1047
Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
KG LGHG++ ++ P + V V T D GSV+ +G FG G
Sbjct: 1048 KGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 31/197 (15%)
Query: 275 IAAGPSYMLAVTGNGVVYSFGSGSNF--C-LGHGEQHDELQPRAIQTFRRKGIHVV---- 327
IA G ++L ++ +G + ++G G+ F C +GH +FR +H V
Sbjct: 781 IACGAEHILVLSSSGQLSAWG-GNRFGQCGVGH-------------SFRIANLHQVDGDW 826
Query: 328 ----RVSAGDEHVVALDSSGYVYTWGKGYCGALGHG--DEIDKTLPEPLSSLKSHLAVQV 381
+++ G H + S G ++T+G G G LGHG + ++ +P ++ L +
Sbjct: 827 PAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIA 886
Query: 382 CARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLY 441
C R T VL DTG V G +G +G D P L LR V I+T Y
Sbjct: 887 CGRAH-TVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR---VRDIATHYY 942
Query: 442 HTVVVTDRGRLFGFGDN 458
H++ +T+ R+F +G N
Sbjct: 943 HSICITEDNRVFEWGRN 959
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 123/312 (39%), Gaps = 51/312 (16%)
Query: 208 PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
PR++E G P + + G L+ G + G N GQ G G + IA L
Sbjct: 768 PRVLEYPGGRP-RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSF------RIANLH 820
Query: 268 EVG----SVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKG 323
+V ++ +IA G + + +G +++FG G LGHG +++ Q + R G
Sbjct: 821 QVDGDWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQ---LVPTRVNG 877
Query: 324 I--HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL---PEPLSSLK---- 374
+ V +++ G H V L +G V G G G +G D+I K P PL L+
Sbjct: 878 LICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDI 937
Query: 375 -SHLAVQVCAR---------------KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDK 418
+H +C K + FV+ S S G + +
Sbjct: 938 ATHYYHSICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPR 997
Query: 419 V------------LRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
V L R + ++ ++ GL H+ ++T G L+ +G QLGH
Sbjct: 998 VNLNLPAEIPREDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHG 1057
Query: 467 TLRGCLEPTEIF 478
+EP ++F
Sbjct: 1058 NKNERMEPHQVF 1069
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 97 LQSVEHSSDIVETSAGNQMQITTGRYHTLLI-SNSSVFSCGSSLCGVLGHGPETTQCVSF 155
L+ V+H D GN + + G H+ LI S ++++ G L LGHG + + +
Sbjct: 1013 LREVKHFLD------GNIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNER-MEP 1065
Query: 156 TRINFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCG 197
++ P+ A V VS NH G VF G N CG
Sbjct: 1066 HQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 78.2 bits (191), Expect = 1e-13, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 45/237 (18%)
Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRK-GIHVVRVS 330
+V I+ G + +T G +Y+FG G LGHG P+ ++ F+ K + VV ++
Sbjct: 190 IVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIA 249
Query: 331 AGDEHVVALDSSGYVYTWGKGYCGALGHGD---EIDKTLPEPLSSLKSHLA--------- 378
G +H +AL G VY+WG LG G+ +LP+ ++ S+
Sbjct: 250 NGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNS 309
Query: 379 -------------------------------VQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
V++ ++ V+ D G ++ FG G
Sbjct: 310 TNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGR 369
Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
LG ++ + + P+++ SL+ H + +S+G H++V+T++G +F FG N++ QLG
Sbjct: 370 LGLGEQSLLMQS-TPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLG 425
Score = 73.6 bits (179), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/295 (23%), Positives = 127/295 (43%), Gaps = 53/295 (17%)
Query: 222 VTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGS--VVQIAAGP 279
++ G + F+T +G+++T G G+LGHG+ +PK + + S VV IA G
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGG 252
Query: 280 SYMLAVTGNGVVYSFGSGSNFC---LGHGEQHDELQPRAIQTFR---------------- 320
+ LA+T G VYS+G G++ C LG+G + F
Sbjct: 253 KHSLALTICGKVYSWG-GNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNSTN 311
Query: 321 -----------------------RKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALG 357
I +V++S G + G ++T+G+G G LG
Sbjct: 312 NNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLG 371
Query: 358 HGDE--IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG---FPD 412
G++ + ++ P+ + SL+ H + + + + VL + G V+ FG G LG F +
Sbjct: 372 LGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSN 431
Query: 413 RGVSDKVLRPRILDSLRAH---HVSQISTGLYHTVVVTDRGRLFGFGDNERAQLG 464
+ K ++ + ++ ++S G YH++ ++D + +G ++ LG
Sbjct: 432 QQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLG 486
Score = 67.8 bits (164), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 18/227 (7%)
Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ--PRAIQTFRRKGIHVVRV 329
+V+++ G + +T G++++FG G + LG GEQ +Q P+ +Q+ +G ++ +
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSL--QGHFIIDM 397
Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGD-EIDKTLPEPLSSLKSHLA--------VQ 380
S+G H + L + G V+++G+ G LG G +T+P+ + ++ ++
Sbjct: 398 SSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIK 457
Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVS--QI 436
V A + + D Y +G +G LG D+ L P ++ +S+ +V +
Sbjct: 458 VSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNL-PVLINSNSVVVDNVKFIDV 516
Query: 437 STGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
S+G H V ++ G L+ +G N +LG + L P + FI +
Sbjct: 517 SSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKCFINSKD 563
Score = 60.1 bits (144), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 166 VVQVSASENHAAFVLQSGQVFTCG--DNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVT 223
+V++S N +A + G +FT G D+ G + P+LV++L+G ++
Sbjct: 340 IVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQS-TPKLVQSLQGHFIIDMS 398
Query: 224 AGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPT-PKSIAPLEEVG-------SVVQI 275
+G + LT +G V + G N GQLG G ++ T PK I + +++++
Sbjct: 399 SGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKV 458
Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHG--EQHDELQPRAI--QTFRRKGIHVVRVSA 331
+AG + +A++ N Y++G LG Q D P I + + + VS+
Sbjct: 459 SAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSS 518
Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPE 368
G +H VA+ G +Y+WG LG + ++ P+
Sbjct: 519 GFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPK 555
Score = 39.7 bits (91), Expect = 0.058, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 142 VLGHGPETTQCVSFTRINFP---SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGH 198
+ G+G + + + I F + +V +S H++F+ G ++T GD GH
Sbjct: 163 IWGNGIRNYKNCNMSSIGFSEMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGH 222
Query: 199 RDTNRPIFRPRLVEALKGVPCKQVTA---GLNFTGFLTIRGHVHTCGSNTHGQLGHGD 253
+ P+LVE + P +V + G + LTI G V++ G N QLG G+
Sbjct: 223 GNL-ESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGN 279
Score = 38.5 bits (88), Expect = 0.12, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 436 ISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
ISTG H+ +TD+G L+ FGD +LGH L P
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSP 231
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 136/357 (38%), Gaps = 49/357 (13%)
Query: 123 HTLLIS-NSSVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAH------VVQVSASENH 175
H+LLI+ ++S G + G LGHG RI+ P V + NH
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHG-------DIKRIDVPKLIESLKGEVFVHAACGRNH 204
Query: 176 AAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIR 235
+ ++G V+ G+N G + + P + G P +V G F+ + +
Sbjct: 205 TLALTENGSVYAFGENKMGQLGLGNKTDAVPSPAQI-LYNGQPITKVACGAEFSMIMDCK 263
Query: 236 GHVHTCGSNTHGQLGHGDT------------------------LDRPTPKSIAPLEEVGS 271
G++++ G +GQLGH +++ I P+ V
Sbjct: 264 GNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILPVPNV-V 322
Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
V IA G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ A
Sbjct: 323 VRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAAQIYA 382
Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTL-PEPLSSLKSHLAVQVCARKRKTFV 390
G A+ G ++ WG D T+ P+ + L + K V
Sbjct: 383 GATCSFAVSEMGGLFFWG-------ATNTSRDSTMYPKAVQDLCGWKVRSLACGKSSIIV 435
Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
D ++ FG LG+ D + +L + Q+ G HT+VV
Sbjct: 436 AADESTISWGPSPTFGELGYGDNKAKSSTTAQEV-KTLDGIYSDQVIMGNSHTLVVA 491
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 323 GIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
G+ V V++G H + + G +++WG+ G LGHGD +P+ + SLK + V
Sbjct: 138 GVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVH 197
Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRP-RILDSLRAHHVSQISTG 439
+ T L + GSVY FG G LG ++ +D V P +IL +++++ G
Sbjct: 198 AACGRNHTLALTENGSVYAFGENKMGQLGLGNK--TDAVPSPAQIL--YNGQPITKVACG 253
Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDT 467
++++ +G L+ FG E QLGH++
Sbjct: 254 AEFSMIMDCKGNLYSFGCPEYGQLGHNS 281
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 27/227 (11%)
Query: 272 VVQIAAG--PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRV 329
V +A+G ++ L +T G ++S+G LGHG+ P+ I++ KG V
Sbjct: 141 VRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESL--KGEVFVHA 198
Query: 330 SAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTF 389
+ G H +AL +G VY +G+ G LG G++ D +P P L + + A +
Sbjct: 199 ACGRNHTLALTENGSVYAFGENKMGQLGLGNKTD-AVPSPAQILYNGQPITKVACGAEFS 257
Query: 390 VLVD-TGSVYGFGWMGFGSLGFPDRG----------VSDKVLRPRILDSLRAHH------ 432
+++D G++Y FG +G LG G +++ RI +
Sbjct: 258 MIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQILP 317
Query: 433 -----VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
V I+ G+ H++++ + R+F +G +LGH R + P
Sbjct: 318 VPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVP 364
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 144/352 (40%), Gaps = 39/352 (11%)
Query: 123 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSAS--ENHAAFV 179
H+LLI+ ++S G + G LGHG T+ V R+ +H V VSA+ NH +
Sbjct: 161 HSLLITTEGKLWSWGRNEKGQLGHG--DTKRVEAPRL-IEGLSHEVIVSAACGRNHTLAL 217
Query: 180 LQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVH 239
++G VF G+N G + + P + G P ++ G F+ + +G+++
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 240 TCGSNTHGQLGH---GDTLDRP---------TPKSIA------------PLEEVGSVVQI 275
+ G +GQLGH G + R P+ +A P+ V V +
Sbjct: 277 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV-VVRDV 335
Query: 276 AAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEH 335
A G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ AG
Sbjct: 336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTC 395
Query: 336 VVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTG 395
A+ G ++ W GA E P+ + L + K V D
Sbjct: 396 SFAVSEVGGLFFW-----GATNTSRE-STMYPKAVQDLCGWRIRSLACGKSSIIVAADES 449
Query: 396 SVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
++ FG LG+ D + +L Q++ G H++V+
Sbjct: 450 TISWGPSPTFGELGYGDHKPKSSTAAQEV-KTLDGIFSEQVAMGYSHSLVIA 500
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 323 GIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
G+ V V +G H + + + G +++WG+ G LGHGD P + L + V
Sbjct: 147 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVS 206
Query: 381 VCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGL 440
+ T L +TGSV+ FG G LG ++ +D V P + +++++ G
Sbjct: 207 AACGRNHTLALTETGSVFAFGENKMGQLGLGNQ--TDAVPSPAQI-MYNGQPITKMACGA 263
Query: 441 YHTVVVTDRGRLFGFGDNERAQLGHDT 467
++++ +G L+ FG E QLGH++
Sbjct: 264 EFSMIMDCKGNLYSFGCPEYGQLGHNS 290
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
++ L +T G ++S+G LGHG+ PR I+ + I V + G H +AL
Sbjct: 160 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI--VSAACGRNHTLAL 217
Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD-TGSVY 398
+G V+ +G+ G LG G++ D +P P + + + A + +++D G++Y
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTD-AVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLY 276
Query: 399 GFGWMGFGSLGFPDRGV---------SDKVLRPR----ILDSLRAHH--------VSQIS 437
FG +G LG G D L PR ++ + V ++
Sbjct: 277 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 336
Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
G HT+V+ + R+F +G +LGH + + P
Sbjct: 337 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 373
>sp|Q18211|RCC1_CAEEL Regulator of chromosome condensation OS=Caenorhabditis elegans
GN=ran-3 PE=4 SV=1
Length = 569
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 140/346 (40%), Gaps = 45/346 (13%)
Query: 184 QVFTCGDNSSFCCGHRDTNRPIFRPRLVEALK--GVPCKQVTAGLNFTGFLTIRGHVHTC 241
+V +CG+ + R T + +PR V+ + G+ Q AG + LT G V+ C
Sbjct: 153 RVLSCGEGEALGHPGRTTTK---KPRKVDIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMC 209
Query: 242 GSNTHGQL------GHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFG 295
G N G + G T + K +E+ G +V +AAG S+ A+T G V ++G
Sbjct: 210 GINEKGTVPAEGVEKEGSTDEFAKVKFEEDIEKEGKIVMLAAGASFTAALTDQGSVIAWG 269
Query: 296 SGSNFCLGHGEQHD---ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGY 352
+ N G+ + H ++Q + + +V+++AG+ H+V LD G + T+G G
Sbjct: 270 NLRN-SNGNVDVHPLLHKMQEAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGE 328
Query: 353 CGALGHG------------DEIDKTLPEPL-----SSLKSHLAVQVCARKRKTFVLVDTG 395
G LG DE L PL +A V A T V + G
Sbjct: 329 MGQLGRSSRTKTIRSKYMCDESGDHLLVPLRFKHKGKFFDVVAKNVFASGFWTIVHGEDG 388
Query: 396 SVYGFGWMGFGSLGFP-------DRGVSDKVLR---PRILDSLRAHHVSQISTGLYHTVV 445
Y FG + LG G ++ LR P + A G+ H V+
Sbjct: 389 KYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAEAPAFGAERTFVNIEGVQHVVI 448
Query: 446 VTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIF---IQEMEEDTGL 488
+ G++F G N LG G + IQE+E D+ +
Sbjct: 449 LGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKI 494
Score = 39.7 bits (91), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 149/396 (37%), Gaps = 56/396 (14%)
Query: 105 DIVETSAGNQMQITTGRYHT-LLISNSSVFSCGSSLCG-VLGHGPETTQCVS-FTRINFP 161
DI E +Q G H+ +L S V+ CG + G V G E F ++ F
Sbjct: 178 DIFEEEGLKPLQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFE 237
Query: 162 ----SAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFR----PRLVEA 213
+V ++A + A + G V G N G+ D + + + P ++
Sbjct: 238 EDIEKEGKIVMLAAGASFTAALTDQGSVIAWG-NLRNSNGNVDVHPLLHKMQEAPVVIVH 296
Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTL---------DRPTPKSIA 264
++ AG N L +G + T G GQLG D +
Sbjct: 297 QAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKTIRSKYMCDESGDHLLV 356
Query: 265 PL--EEVGSVVQIAA----GPSYMLAVTG-NGVVYSFGSGSNFCLG----------HGEQ 307
PL + G + A + V G +G Y+FG + LG G+
Sbjct: 357 PLRFKHKGKFFDVVAKNVFASGFWTIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQD 416
Query: 308 HDELQ---PRAIQTF--RRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHG--- 359
+ EL+ P F R +++ G +HVV L S G V+ GK ALG G
Sbjct: 417 NRELRVFLPAEAPAFGAERTFVNI----EGVQHVVILGSDGKVFAMGKNTDNALGLGNWT 472
Query: 360 --DEIDKTLPEPLSSLK-SHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVS 416
D+ L + + ++ V V A+ + + G+ Y +G+ G LG +
Sbjct: 473 GKDDQQHWLYDTIQEIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDED 532
Query: 417 DKVL-RPRILDS--LRAHHVSQISTGLYHTVVVTDR 449
+K++ +P + S L + + S HT+++ +
Sbjct: 533 EKMVSKPEEISSAHLDGYSIIGASISDQHTLIIAKK 568
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 139/350 (39%), Gaps = 35/350 (10%)
Query: 123 HTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASENHAAFVLQ 181
H+LLI+ ++S G + G LGHG +T + + I S +V + NH +
Sbjct: 159 HSLLITTEGKLWSWGRNEKGQLGHG-DTKRVEAPRLIEALSHEAIVLAACGRNHTLALTD 217
Query: 182 SGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTC 241
+G VF G+N G + + P + G P ++ G F+ + +G++++
Sbjct: 218 TGSVFAFGENKMGQLGLGNQTDAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLYSF 276
Query: 242 GSNTHGQLGH---GDTLDRP---------TPKSIA------------PLEEVGSVVQIAA 277
G +GQLGH G + R P+ +A P+ V V +A
Sbjct: 277 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNV-VVRDVAC 335
Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
G ++ L + V+S+G G LGH EQ DE+ PR ++ F G ++ AG
Sbjct: 336 GANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSF 395
Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
A+ G ++ WG + P+ + L + K V D ++
Sbjct: 396 AVSEVGGLFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTI 449
Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVT 447
FG LG+ D + +L Q++ G H++V+
Sbjct: 450 SWGPSPTFGELGYGDHKPKSSTAAQEV-KTLDGIFSEQVAMGYSHSLVIA 498
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 7/148 (4%)
Query: 323 GIHVVRVSAGD--EHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQ 380
G+ V V +G H + + + G +++WG+ G LGHGD P + +L SH A+
Sbjct: 145 GVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEAL-SHEAIV 203
Query: 381 VCARKRK-TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTG 439
+ A R T L DTGSV+ FG G LG ++ +D V P + +++++ G
Sbjct: 204 LAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQ--TDAVPSPAQI-MYNGQPITKMACG 260
Query: 440 LYHTVVVTDRGRLFGFGDNERAQLGHDT 467
++++ +G L+ FG E QLGH++
Sbjct: 261 AEFSMLMDCKGNLYSFGCPEYGQLGHNS 288
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 280 SYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVAL 339
++ L +T G ++S+G LGHG+ PR I+ + I V + G H +AL
Sbjct: 158 AHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAI--VLAACGRNHTLAL 215
Query: 340 DSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVD-TGSVY 398
+G V+ +G+ G LG G++ D +P P + + + A + +L+D G++Y
Sbjct: 216 TDTGSVFAFGENKMGQLGLGNQTD-AVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLY 274
Query: 399 GFGWMGFGSLGFPDRGV---------SDKVLRPR----ILDSLRAHH--------VSQIS 437
FG +G LG G D L PR ++ + V ++
Sbjct: 275 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 334
Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP 474
G HT+V+ + R+F +G +LGH + + P
Sbjct: 335 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 371
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 142/335 (42%), Gaps = 29/335 (8%)
Query: 165 HVVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
VVQV+A A V +SG++ + G + +P F R +E GV
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVT 398
Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAA 277
K V G FT LT RG + T GS ++G LGHG+ D P + L +G +VQ+A
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEAL--LGYEMVQVAC 456
Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
G S++LA++ +G ++++G G LG G + P+ + G RV G + +
Sbjct: 457 GASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPV--APGQEAQRVVCGIDSSM 514
Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLA---VQVCARKRKTFVLVD- 393
L S G V G LG P P ++ L+ + ++ + VD
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDL 574
Query: 394 ----------TGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHT 443
+G Y FG G LG R VS R + L+ ++ + ++ G T
Sbjct: 575 GTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIK---MVMVACGDAFT 631
Query: 444 VVVTDRGRLFGFGDNERAQLG-HDTLRGCLEPTEI 477
V V G ++ +G R +LG D G P ++
Sbjct: 632 VAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQL 666
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 14/220 (6%)
Query: 272 VVQIAAGPSYMLAVTGNGVVY-----SFGSGSNFCLGHGEQHDELQPRAIQTFR--RKGI 324
VVQ+AAG + VT +G + G+G L + QP+ + F + G+
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELP--QPQFVSRFLEGQSGV 397
Query: 325 HVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCAR 384
+ V+ GD L G + T+G G G LGHG+ D + P + +L + VQV
Sbjct: 398 TIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACG 457
Query: 385 KRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTV 444
L G ++ +G G LG R + P+ + ++ G+ ++
Sbjct: 458 ASHVLALSTDGELFAWGRGDGGRLGLGTRESHNC---PQQVPVAPGQEAQRVVCGIDSSM 514
Query: 445 VVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEE 484
++T GR+ G N +LG D L L+ + Q++EE
Sbjct: 515 ILTSPGRVLACGSNRFNKLGLDHLS--LDEEPVPYQQVEE 552
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 137/312 (43%), Gaps = 31/312 (9%)
Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
+H + + G V T G G ++ +P LV L+ V Q AG T L+
Sbjct: 26 SHRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLS 83
Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
G V++ G N G LG DT + +E VVQ++AG S+ A+T +G V+
Sbjct: 84 QSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 294 FGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
+GS +N +G E + P +Q VV+V++G++H+V L + G +YT G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQL----DAPVVKVASGNDHLVMLTNDGDLYTLGC 198
Query: 351 GYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRK--------------TFVLVDT 394
G G LG E+ ++ + L L V + +R + TF +
Sbjct: 199 GEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISRE 258
Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI--STGLYHTVVVTDRGRL 452
G VYGFG + LG P G P+ L S + S + S G +HTV + G+
Sbjct: 259 GHVYGFGLSNYHQLGTPGTG---SCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKA 315
Query: 453 FGFGDNERAQLG 464
+ G E +LG
Sbjct: 316 YSLGRAEYGRLG 327
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 116/263 (44%), Gaps = 26/263 (9%)
Query: 233 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
T G V T G GQLG G++ L+R P + L++V VQ AG + + ++ +G V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV---VQAEAGGMHTVCLSQSGQV 88
Query: 292 YSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
YSFG LG + E+ P ++ + VV+VSAGD H AL G V+ WG
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEK----VVQVSAGDSHTAALTEDGRVFLWG 144
Query: 350 --KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
+ G +G + + K++ P+ V+V + +L + G +Y G G
Sbjct: 145 SFRDNNGVIGLLEPMKKSM-VPVQVQLDAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQ 203
Query: 408 LG-----FPDRGVSD---KVLRPR-ILDSLRAHH----VSQISTGLYHTVVVTDRGRLFG 454
LG F +RG ++L PR +L R G Y T ++ G ++G
Sbjct: 204 LGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVYG 263
Query: 455 FGDNERAQLGHDTLRGCLEPTEI 477
FG + QLG C P +
Sbjct: 264 FGLSNYHQLGTPGTGSCFIPQNL 286
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 145/351 (41%), Gaps = 45/351 (12%)
Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
P VVQ A H + QSGQV++ G N G RDT+ VE + VP K
Sbjct: 64 PLLQDVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALG-RDTS--------VEGSEMVPGK 114
Query: 221 --------QVTAGLNFTGFLTIRGHVHTCGS--NTHGQLGHGDTLDRPTPKSIAPLEEV- 269
QV+AG + T LT G V GS + +G +G L P KS+ P++
Sbjct: 115 VELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG----LLEPMKKSMVPVQVQL 170
Query: 270 -GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---------GEQ--HDELQPRAIQ 317
VV++A+G +++ +T +G +Y+ G G LG G Q L PR +
Sbjct: 171 DAPVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVL 230
Query: 318 TFRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
R VR G A+ G+VY +G LG +P+ L+S K
Sbjct: 231 LKSRGTRGRVRFQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFK 290
Query: 375 SHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
+ V + T + G Y G +G LG + G +K + P ++ L
Sbjct: 291 NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGE-GAEEKSI-PTLISRLPV-- 346
Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
VS ++ G V+ GR+F +G QLG P E+ +++E
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLE 397
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 143/358 (39%), Gaps = 39/358 (10%)
Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
+Q G HT+ +S S V+S G + G LG + + VVQVSA +
Sbjct: 70 VQAEAGGMHTVCLSQSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGD 128
Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALKGVPCKQVTAGL 226
+H A + + G+VF G SF RD N P+ + + V+ P +V +G
Sbjct: 129 SHTAALTEDGRVFLWG---SF----RDNNGVIGLLEPMKKSMVPVQVQLDAPVVKVASGN 181
Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAPLEEVGSVVQIA 276
+ LT G ++T G GQLG L R L+ G+ ++
Sbjct: 182 DHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVR 241
Query: 277 -----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
G + A++ G VY FG + LG P+ + +F+ V S
Sbjct: 242 FQDAFCGAYFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSG 301
Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFV 390
G H V +DS G Y+ G+ G LG G+ +K++P +S L + V +
Sbjct: 302 GQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYA 359
Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVV 446
+ G V+ +G LG G + P + L V +S+G HTV++
Sbjct: 360 VSKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 35.8 bits (81), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
I K P ++ V+V R T + G V G G LG + + K +
Sbjct: 6 IAKRRSPPEDAIPKSKKVKVSHRSHNT----EPGLVLTLGQGDVGQLGLGESVLERK--K 59
Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGC-LEPTEIFI 479
P ++ L+ V Q G HTV ++ G+++ FG N+ LG DT + G + P ++ +
Sbjct: 60 PALVPLLQ--DVVQAEAGGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL 117
Query: 480 QE 481
QE
Sbjct: 118 QE 119
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 137/312 (43%), Gaps = 31/312 (9%)
Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTGFLT 233
+H + + G V T G G ++ +P LV L+ V Q AG T L
Sbjct: 26 SHRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLN 83
Query: 234 IRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYS 293
G V++ G N G LG DT + +E VVQ++AG S+ A+T +G V+
Sbjct: 84 QSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFL 142
Query: 294 FGS--GSNFCLGHGE-QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGK 350
+GS +N +G E + P +Q + VV+V++G++H+V L + G +YT G
Sbjct: 143 WGSFRDNNGVIGLLEPMKKSMVPVQVQL----DMPVVKVASGNDHLVMLTTDGDLYTLGC 198
Query: 351 GYCGALGHGDEI--DKTLPEPLSSLKSHLAVQVCARKRK--------------TFVLVDT 394
G G LG E+ ++ + L L V + +R + TF +
Sbjct: 199 GEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISRE 258
Query: 395 GSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQI--STGLYHTVVVTDRGRL 452
G VYGFG + LG P + P+ L S + S + S G +HT+ + G+
Sbjct: 259 GHVYGFGLSNYHQLGTPG---TASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKA 315
Query: 453 FGFGDNERAQLG 464
+ G E +LG
Sbjct: 316 YSLGRAEYGRLG 327
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 146/351 (41%), Gaps = 45/351 (12%)
Query: 161 PSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCK 220
P VVQ A H + QSGQV++ G N G RDT+ VE + VP K
Sbjct: 64 PLLQDVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALG-RDTS--------VEGSEMVPGK 114
Query: 221 --------QVTAGLNFTGFLTIRGHVHTCGS--NTHGQLGHGDTLDRPTPKSIAPLEEV- 269
QV+AG + T LT G V GS + +G +G L P KS+ P++
Sbjct: 115 VELQEKVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIG----LLEPMKKSMVPVQVQL 170
Query: 270 -GSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH---------GEQHDE--LQPRAIQ 317
VV++A+G +++ +T +G +Y+ G G LG G Q E L P+ +
Sbjct: 171 DMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVL 230
Query: 318 TFRRKGIHVVRVS---AGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLK 374
R VR G A+ G+VY +G LG +P+ L+S K
Sbjct: 231 LKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFK 290
Query: 375 SHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHH 432
+ V + T + G Y G +G LG + G +K + P ++ L
Sbjct: 291 NSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGE-GAEEKSI-PTLISRLPV-- 346
Query: 433 VSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
VS ++ G V+ GR+F +G QLG P E+ +++E
Sbjct: 347 VSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLE 397
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 26/263 (9%)
Query: 233 TIRGHVHTCGSNTHGQLGHGDT-LDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
T G V T G GQLG G++ L+R P + L++V VQ AG + + + +G V
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV---VQAEAGGMHTVCLNQSGQV 88
Query: 292 YSFGSGSNFCLGHGE--QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
YSFG LG + E+ P ++ + VV+VSAGD H AL G V+ WG
Sbjct: 89 YSFGCNDEGALGRDTSVEGSEMVPGKVELQEK----VVQVSAGDSHTAALTEDGRVFLWG 144
Query: 350 --KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
+ G +G + + K++ P+ V+V + +L G +Y G G
Sbjct: 145 SFRDNNGVIGLLEPMKKSM-VPVQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQ 203
Query: 408 LG-----FPDRGVS---DKVLRPR--ILDSLRAHHVSQIST---GLYHTVVVTDRGRLFG 454
LG F +RG +++L P+ +L S + + G Y T ++ G ++G
Sbjct: 204 LGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYG 263
Query: 455 FGDNERAQLGHDTLRGCLEPTEI 477
FG + QLG C P +
Sbjct: 264 FGLSNYHQLGTPGTASCFIPQNL 286
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 144/358 (40%), Gaps = 39/358 (10%)
Query: 115 MQITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVVQVSASE 173
+Q G HT+ ++ S V+S G + G LG + + VVQVSA +
Sbjct: 70 VQAEAGGMHTVCLNQSGQVYSFGCNDEGALGR-DTSVEGSEMVPGKVELQEKVVQVSAGD 128
Query: 174 NHAAFVLQSGQVFTCGDNSSFCCGHRDTN------RPIFRPRL-VEALKGVPCKQVTAGL 226
+H A + + G+VF G SF RD N P+ + + V+ +P +V +G
Sbjct: 129 SHTAALTEDGRVFLWG---SF----RDNNGVIGLLEPMKKSMVPVQVQLDMPVVKVASGN 181
Query: 227 NFTGFLTIRGHVHTCGSNTHGQLGH----------GDTLDRPTPKSIAPLEEVGSVVQIA 276
+ LT G ++T G GQLG L+R L+ GS ++
Sbjct: 182 DHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVR 241
Query: 277 -----AGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
G A++ G VY FG + LG P+ + +F+ V S
Sbjct: 242 FQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSG 301
Query: 332 GDEHVVALDSSGYVYTWGKGYCGALGHGDEI-DKTLPEPLSSLKSHLAVQVCARKRKTFV 390
G H + +DS G Y+ G+ G LG G+ +K++P +S L + V +
Sbjct: 302 GQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRLP--VVSSVACGASVGYA 359
Query: 391 LVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRIL--DSLRAHHVSQISTGLYHTVVV 446
+ G V+ +G LG G + P + L V +S+G HTV++
Sbjct: 360 VSKDGRVFAWGMGTNYQLG---TGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 10/122 (8%)
Query: 362 IDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLR 421
I K P ++ V+V R KT + G V G G LG + + K +
Sbjct: 6 IAKRRSPPEDAIPKSKKVKVSHRSHKT----EPGLVLTLGQGDVGQLGLGESVLERK--K 59
Query: 422 PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT-LRGC-LEPTEIFI 479
P ++ L+ V Q G HTV + G+++ FG N+ LG DT + G + P ++ +
Sbjct: 60 PALVPLLQ--DVVQAEAGGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVEL 117
Query: 480 QE 481
QE
Sbjct: 118 QE 119
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 122/320 (38%), Gaps = 52/320 (16%)
Query: 165 HVVQVSASENHAAFVLQSGQVFTC------GDNSSFCCGHRDTNRPIFRPRLVEALKGVP 218
VVQV+A A V +SG++ S G + +P F R +E GV
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVT 392
Query: 219 CKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLEEVG-SVVQIAA 277
K V G FT LT RG + T GS ++G LGHG D P + L +G +VQ+A
Sbjct: 393 IKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL--LGYEMVQVAC 450
Query: 278 GPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVV 337
G S++LA++ ++++G G + LG G + P+ Q G RV G + +
Sbjct: 451 GASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQ--QVPMPPGQEAQRVVCGIDSSM 508
Query: 338 ALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSV 397
L G G LG P P ++ L +F L+ +
Sbjct: 509 ILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEAL----------SFTLLGSA-- 556
Query: 398 YGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGD 457
L + I G H+ VT G + FG
Sbjct: 557 -----------------------------PLDQEPLLSIDLGTAHSAAVTASGDCYTFGS 587
Query: 458 NERAQLGHDTLRGCLEPTEI 477
N+ QLG +T RG P ++
Sbjct: 588 NQHGQLGTNTRRGSRAPCKV 607
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 23/229 (10%)
Query: 258 PTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQ 317
P P PL V Q+ G ++L + G V+S+G+G + LGHG EL+PR ++
Sbjct: 149 PEPPFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLE 208
Query: 318 TFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHL 377
+G+ + +V+AG H V L +G +Y WG G L +L +
Sbjct: 209 AL--QGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQL---------------ALPTRS 251
Query: 378 AVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQIS 437
+ A + + L + G + G P ++ + P +LD S
Sbjct: 252 GTENKAEREEATELNEDGLKEE---LAVADAGAPAHFIAIQPF-PALLDLPLGSDAVMAS 307
Query: 438 TGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEP--TEIFIQEMEE 484
G HT VVT G L+ +G + QLGH P E F++ E
Sbjct: 308 CGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLE 356
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 79/205 (38%), Gaps = 26/205 (12%)
Query: 166 VVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAG 225
V Q+ H + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGH-GTLEAELEPRLLEALQGLRMAKVAAG 221
Query: 226 LNFTGFLTIRGHVHTCGSNTHGQLG---HGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYM 282
+ L+ G ++ G N GQL T ++ + L E G ++A
Sbjct: 222 GWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELA------ 275
Query: 283 LAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSS 342
V G+ ++F +QP G V S G H + +
Sbjct: 276 --------VADAGAPAHFIA--------IQPFPALLDLPLGSDAVMASCGSRHTAVVTRT 319
Query: 343 GYVYTWGKGYCGALGHGDEIDKTLP 367
G +YTWG G G LGH D P
Sbjct: 320 GELYTWGWGKYGQLGHKDSTSLDRP 344
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 389 FVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTD 448
+L G V+ +G G LG G + L PR+L++L+ +++++ G +H+V +++
Sbjct: 174 LLLCAAGQVFSWGAGRHGQLG---HGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSE 230
Query: 449 RGRLFGFGDNERAQLGHDTLRGC------LEPTEIFIQEMEEDTGLA 489
G ++ +G NE QL T G E TE+ ++E+ +A
Sbjct: 231 TGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVA 277
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 106/247 (42%), Gaps = 19/247 (7%)
Query: 233 TIRGHVHTCGSNTHGQLGHG-DTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVV 291
T+ G+V CG+ GQLG G D L+R K ++P+ + V I+AG + L +T +G +
Sbjct: 39 TVLGNVLVCGNGDVGQLGLGEDILER---KRLSPVAGIPDAVDISAGGMHNLVLTKSGDI 95
Query: 292 YSFGSGSNFCLGHGEQHD--ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWG 349
YSFG LG D E +P I + + +SAGD H L G V+ WG
Sbjct: 96 YSFGCNDEGALGRDTSEDGSESKPDLIDLPGK----ALCISAGDSHSACLLEDGRVFAWG 151
Query: 350 KGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLG 409
G ID P+ ++ + + + +L G V+ G G LG
Sbjct: 152 SFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLG 211
Query: 410 -FPDRGVSDK-------VLRPRILDSLRAHHVSQISTGLYHTVVVTDRGR-LFGFGDNER 460
+R +S + +LRP L RA I Y T + + + ++ G N
Sbjct: 212 RLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNF 271
Query: 461 AQLGHDT 467
QL H+T
Sbjct: 272 KQLAHET 278
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 220 KQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDTLDR-PTPKSIAPLEEVGSVVQIAAG 278
+ + G + T LT G +G+LG GD D P + L E +V + G
Sbjct: 296 RHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE--KIVSVGCG 353
Query: 279 PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDEHVVA 338
AVT +G +YS+GSG N LG G+ DEL+P + + +G H++ S G +H +
Sbjct: 354 EVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIF 413
Query: 339 L 339
L
Sbjct: 414 L 414
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 144/367 (39%), Gaps = 44/367 (11%)
Query: 131 SVFSCGSSLCGVLGHGPETTQCVSFTRI-NFPSAAHVVQVSASENHAAFVLQSGQVFTCG 189
+V CG+ G LG G + + + + P A V +SA H + +SG +++ G
Sbjct: 43 NVLVCGNGDVGQLGLGEDILERKRLSPVAGIPDA---VDISAGGMHNLVLTKSGDIYSFG 99
Query: 190 DNSSFCCGHRDTNRP--IFRPRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGS--NT 245
N G RDT+ +P L++ C ++AG + + L G V GS ++
Sbjct: 100 CNDEGALG-RDTSEDGSESKPDLIDLPGKALC--ISAGDSHSACLLEDGRVFAWGSFRDS 156
Query: 246 HGQLGHGDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGH- 304
HG +G ++ TP L E IA+G +++ +T G V++ G LG
Sbjct: 157 HGNMGLTIDGNKRTP---IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRL 213
Query: 305 ------GE----QHDELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCG 354
GE + D L+P + R K + + + + S W G
Sbjct: 214 SERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWAT---NYCTFMRESQTQVIWATGLNN 270
Query: 355 --ALGH---GDEIDKTLPEPLSSLKSHLA--VQVCARKRKTFVLVDTGSVYGFGWMGFGS 407
L H G E L+ +K+ L + + T +L G +G
Sbjct: 271 FKQLAHETKGKEF------ALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGR 324
Query: 408 LGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
LG D V D V +P I+ L VS + G + VT G+L+ +G QLG
Sbjct: 325 LGLGD--VKDVVEKPTIVKKLTEKIVS-VGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGD 381
Query: 468 LRGCLEP 474
LEP
Sbjct: 382 GDDELEP 388
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 285 VTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGI-HVVRVSAGDEHVVALDSSG 343
V GNG V G G + + L P A GI V +SAG H + L SG
Sbjct: 46 VCGNGDVGQLGLGEDIL-----ERKRLSPVA-------GIPDAVDISAGGMHNLVLTKSG 93
Query: 344 YVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWM 403
+Y++G GALG D + +P A+ + A + L++ G V F W
Sbjct: 94 DIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRV--FAWG 151
Query: 404 GF----GSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNE 459
F G++G G + +D + I++G H V++T G++F G E
Sbjct: 152 SFRDSHGNMGLTIDGN-----KRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAE 206
Query: 460 RAQLGHDTLRGC-----------LEPTEIFI 479
+ QLG + R L PT++ I
Sbjct: 207 QGQLGRLSERSISGEGRRGKRDLLRPTQLII 237
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 24/282 (8%)
Query: 101 EHSSDIVETSAGNQMQITTGRYHTL-LISNSSVFSCGSSLCGVLGHGPETTQCVSFTRIN 159
E D+++ G + I+ G H+ L+ + VF+ GS G+ T T I+
Sbjct: 116 ESKPDLIDL-PGKALCISAGDSHSACLLEDGRVFAWGS-FRDSHGNMGLTIDGNKRTPID 173
Query: 160 FPSAAHVVQVSASENHAAFVLQSGQVFTCG----------DNSSFCCGHRDTNRPIFRPR 209
+++ +H + +G+VFT G S R R + RP
Sbjct: 174 LMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPT 233
Query: 210 LVEALKGVPCKQVTAGLNFTGFL--TIRGHVHTCGSNTHGQLGHGDTLDRPTPKSIAPLE 267
+ + P + + A N+ F+ + + G N QL H +T + ++ P++
Sbjct: 234 QLIITRAKPFEAIWA-TNYCTFMRESQTQVIWATGLNNFKQLAH-ETKGKEF--ALTPIK 289
Query: 268 -EVGSVVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQ-PRAIQTFRRKGIH 325
E+ + IA G + + +T + G LG G+ D ++ P ++ K
Sbjct: 290 TELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEK--- 346
Query: 326 VVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLP 367
+V V G+ A+ G +Y+WG G LG GD D+ P
Sbjct: 347 IVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEP 388
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 324 IHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEPLSSLKSHLAVQVCA 383
+ ++ G EH + LD++G V++WG G G LGHG + P L +L+ + +V A
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAA 217
Query: 384 RKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSD-----------------KVLR----- 421
+ + +TG +Y +GW G L P R +++ +V R
Sbjct: 218 GGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAE 277
Query: 422 -------------PRILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHD 466
P +LD + S G HT VVT G L+ +G + QLGH+
Sbjct: 278 DGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHE 335
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 46/219 (21%)
Query: 274 QIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGD 333
Q+ G + L + G V+S+G G + LGHG EL+PR ++ +G+ + V+AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEAL--QGLVMAEVAAGG 219
Query: 334 EHVVALDSSGYVYTWGKGYCGALG----------------------HGDEIDKT------ 365
H V + +G +Y WG G L G ++ +T
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDG 279
Query: 366 LPEPLSSLKSHLA----------VQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGV 415
P P +++ A V+ R T V+ TG +Y +GW +G LG D
Sbjct: 280 APAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS 339
Query: 416 SDKVLRPRILDSL--RAHHVSQISTGLYHT-VVVTDRGR 451
D RPR ++ + V ++ G ++T V ++G+
Sbjct: 340 LD---RPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGK 375
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 81/206 (39%), Gaps = 44/206 (21%)
Query: 168 QVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLN 227
Q+ HA + +GQVF+ G GH T PRL+EAL+G+ +V AG
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGH-GTLEAELEPRLLEALQGLVMAEVAAGGW 220
Query: 228 FTGFLTIRGHVHTCGSNTHGQLG--------HGDTLDRPTPKSIAPLEEVGSVVQIAAG- 278
+ ++ G ++ G N GQL G+T+ R + L E GS V+ G
Sbjct: 221 HSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATE----LNEDGSQVKRTGGA 276
Query: 279 ----PSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSAGDE 334
P+ +AV + GS+ V+ S G
Sbjct: 277 EDGAPAPFIAVQPFPALLDLPMGSD--------------------------AVKASCGSR 310
Query: 335 HVVALDSSGYVYTWGKGYCGALGHGD 360
H + +G +YTWG G G LGH D
Sbjct: 311 HTAVVTRTGELYTWGWGKYGQLGHED 336
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 369 PLSSLKSHLAVQVCARKRK-----TFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPR 423
P + LA ++ AR+ + +L G V+ +G G LG G + L PR
Sbjct: 146 PRAPFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGH---GTLEAELEPR 202
Query: 424 ILDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEME 483
+L++L+ +++++ G +H+V V++ G ++ +G NE QL T R E E +E
Sbjct: 203 LLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPT-RNLAEDGETVAREAT 261
Query: 484 E 484
E
Sbjct: 262 E 262
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 69/184 (37%), Gaps = 43/184 (23%)
Query: 116 QITTGRYHTLLISNS-SVFSCGSSLCGVLGHGPETTQCVSFTRINFPSAAHVV-QVSASE 173
Q+ G H LL+ + VFS G G LGHG T + R+ V+ +V+A
Sbjct: 162 QLELGAEHALLLDAAGQVFSWGGGRHGQLGHG--TLEAELEPRLLEALQGLVMAEVAAGG 219
Query: 174 NHAAFVLQSGQVFTCGDNSS--------------------------------FCCGHRDT 201
H+ V ++G ++ G N S G D
Sbjct: 220 WHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDG 279
Query: 202 NRPIFR-----PRLVEALKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQLGHGDT-- 254
F P L++ G + + G T +T G ++T G +GQLGH DT
Sbjct: 280 APAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS 339
Query: 255 LDRP 258
LDRP
Sbjct: 340 LDRP 343
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEAL--K 215
++ P + V+ S H A V ++G+++T G GH DT + RPR VE K
Sbjct: 294 LDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTS-LDRPRRVEYFVDK 352
Query: 216 GVPCKQVTAG 225
+ K VT G
Sbjct: 353 QLQVKAVTCG 362
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 125/315 (39%), Gaps = 63/315 (20%)
Query: 158 INFPSAAHVVQVSASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIF----RPRLVEA 213
++ P V+QVS H+ + VF+ G+NS CG + I+ R ++
Sbjct: 168 LDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQD 227
Query: 214 LKGVPCKQVTAGLNFTGFLTIRGHVHTCGSNTHGQ--LGHGDTLDRPTPKSIAPLEEVGS 271
G QV G + + FLT +G V++CG GQ LGH + PT K L V +
Sbjct: 228 FDG-QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPT-KLGGDLAGV-N 284
Query: 272 VVQIAAGPSYMLAVTGNGVVYSFGSGSNFCLGHGEQHDELQPRAIQTFRRKGIHVVRVSA 331
V+Q+A LAV+ +G + FG G++ L D Q + G+ VR +A
Sbjct: 285 VIQVATYGDCCLAVSADGGL--FGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAA 342
Query: 332 -GDEHVVALDSSGYVYTWGKGYCGALGHGDE-IDKTLPEPLSSLKSHLAVQVCARKRKTF 389
G L+ G+V+ WG G LG G ++ +PE +
Sbjct: 343 CGGTGCAVLNGEGHVFVWGYGI---LGKGPNLVESAVPEMIPPTL--------------- 384
Query: 390 VLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRILDSLRAHHVSQISTGLYHTVVVTDR 449
FG F P I VS+I GL H +T++
Sbjct: 385 ----------FGLTEF---------------NPEI-------QVSRIRCGLSHFAALTNK 412
Query: 450 GRLFGFGDNERAQLG 464
G LF +G N R LG
Sbjct: 413 GELFVWGKNIRGCLG 427
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 16/265 (6%)
Query: 115 MQITTGRYHTLLISN-SSVFSCGSSLCGVLGHGPETTQCVSFT-RINFPSA--AHVVQVS 170
+Q++ GR H+L++++ VFS G++ G G + S + R++ VVQV+
Sbjct: 177 LQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVA 236
Query: 171 ASENHAAFVLQSGQVFTCGDNSSFCCGHRDTNRPIFRPRLVEALKGVPCKQVTAGLNFTG 230
++H+ F+ G+V++CG + G N +L L GV QV +
Sbjct: 237 CGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTKLGGDLAGVNVIQVATYGDCCL 296
Query: 231 FLTIRGHVHTCGSNTHGQLGH-GDTLDRPTPKSIAPLEEVGSVVQIAAGPSYMLAVTGNG 289
++ G + G++ + QL D+ P+ + VG V Q A G + + G G
Sbjct: 297 AVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLH-FSGVGKVRQAACGGTGCAVLNGEG 355
Query: 290 VVYSFGSGSNFCLGHGEQH-----DELQPRAI--QTFRRKGIHVVRVSAGDEHVVALDSS 342
V+ +G G LG G E+ P + T I V R+ G H AL +
Sbjct: 356 HVFVWGYG---ILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNK 412
Query: 343 GYVYTWGKGYCGALGHGDEIDKTLP 367
G ++ WGK G LG G D+ P
Sbjct: 413 GELFVWGKNIRGCLGIGRLEDQYFP 437
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 8/163 (4%)
Query: 310 ELQPRAIQTFRRKGIHVVRVSAGDEHVVALDSSGYVYTWGKGYCGALGHGDEIDKTLPEP 369
E P ++ R + V++VS G H + L V++ G G G ++ E
Sbjct: 160 EPSPVSLPLDRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSES 219
Query: 370 -----LSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGVSDKVLRPRI 424
+ + VQV + + L D G VY GW G G ++ ++
Sbjct: 220 HRVHRMQDFDGQV-VQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSS--PTKL 276
Query: 425 LDSLRAHHVSQISTGLYHTVVVTDRGRLFGFGDNERAQLGHDT 467
L +V Q++T + V+ G LFG+G++E QL T
Sbjct: 277 GGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQLASVT 319
Score = 35.8 bits (81), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Query: 393 DTGSVYGFGWMGFGSLGFPDRGVSDK------VLRPRI----LDSLRAHHVSQISTGLYH 442
D V+G G LGF R DK VL P LD + V Q+S G H
Sbjct: 127 DVTKVWGMGLNKDSQLGF-HRSRKDKTRGYEYVLEPSPVSLPLDRPQETRVLQVSCGRAH 185
Query: 443 TVVVTDRGRLFGFGDNERAQLGHDTLRGCLEPTEIFIQEMEEDTG 487
++V+TDR +F G+N Q G + + + M++ G
Sbjct: 186 SLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDG 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,693,260
Number of Sequences: 539616
Number of extensions: 8019544
Number of successful extensions: 19428
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 18009
Number of HSP's gapped (non-prelim): 486
length of query: 489
length of database: 191,569,459
effective HSP length: 122
effective length of query: 367
effective length of database: 125,736,307
effective search space: 46145224669
effective search space used: 46145224669
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)