Your job contains 1 sequence.
>011273
MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM
TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVK
AVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDS
PSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQNVDAKSLEGDVKGIDTIPVTGH
KRVLTVDIPNSHKARCSQIGFNGSFVPGHSDVNFTSFDSAIPTQPWSEVSETQFQHEHKP
LRLENDFTQLPLPGPRHHIQVDCIQSGPSASSKPSVVDKDNLKPFDCTYKSNYPNAIPIG
SAVDTFPVQTTSPIVNHQPFEPIARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSSLTS
LDEDLQLCWLQGDCFAMNLGLQDINFSEYNDPALNSEVPFHLYDTMRFDYEHYYDPTECP
IIDQGLFIA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011273
(489 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2008585 - symbol:ARR11 "response regulator 11"... 599 1.8e-74 2
TAIR|locus:2065398 - symbol:RR14 "response regulator 14" ... 420 9.5e-42 2
TAIR|locus:2040194 - symbol:RR12 "response regulator 12" ... 409 4.1e-38 1
TAIR|locus:2130095 - symbol:RR2 "response regulator 2" sp... 404 4.0e-37 1
TAIR|locus:2093668 - symbol:RR1 "response regulator 1" sp... 291 3.5e-34 2
TAIR|locus:2116587 - symbol:RR10 "response regulator 10" ... 341 3.8e-29 1
UNIPROTKB|Q7Y0W3 - symbol:Q7Y0W3 "Two-component response ... 296 8.3e-26 1
UNIPROTKB|Q7Y0W5 - symbol:EHD1 "Two-component response re... 296 8.3e-26 1
TAIR|locus:2155954 - symbol:APRR4 "pseudo-response regula... 277 1.1e-23 1
TAIR|locus:2141020 - symbol:APRR2 species:3702 "Arabidops... 177 5.8e-15 2
TAIR|locus:2058445 - symbol:MYBC1 "AT2G40970" species:370... 190 3.8e-14 1
TAIR|locus:2148348 - symbol:BOA "AT5G59570" species:3702 ... 193 6.4e-13 1
TAIR|locus:2175364 - symbol:AT5G05090 "AT5G05090" species... 186 1.3e-12 1
TAIR|locus:2103247 - symbol:AT3G10760 "AT3G10760" species... 188 5.0e-12 1
TAIR|locus:2167639 - symbol:GLK2 "AT5G44190" species:3702... 186 1.4e-11 1
UNIPROTKB|Q5Z5I4 - symbol:GLK1 "Probable transcription fa... 185 2.7e-11 1
TAIR|locus:2199342 - symbol:APRR6 "pseudo-response regula... 144 4.6e-11 2
TAIR|locus:2148720 - symbol:PHL1 "AT5G29000" species:3702... 169 1.3e-09 1
TAIR|locus:2026739 - symbol:AT1G69580 species:3702 "Arabi... 165 2.2e-09 1
TAIR|locus:2172394 - symbol:MYR1 "myb-related protein 1" ... 166 2.6e-09 1
TAIR|locus:2100880 - symbol:AT3G04450 species:3702 "Arabi... 162 9.0e-09 1
TAIR|locus:2031210 - symbol:AT1G25550 species:3702 "Arabi... 156 2.4e-08 1
TAIR|locus:2095933 - symbol:MYR2 species:3702 "Arabidopsi... 155 4.2e-08 1
TAIR|locus:2063746 - symbol:AT2G03500 "AT2G03500" species... 159 5.2e-08 2
TAIR|locus:2026863 - symbol:AT1G68670 species:3702 "Arabi... 150 1.2e-07 1
TAIR|locus:2089260 - symbol:AT3G13040 species:3702 "Arabi... 147 4.2e-07 1
TAIR|locus:2115070 - symbol:AT4G37180 species:3702 "Arabi... 144 6.0e-07 1
TAIR|locus:2085984 - symbol:AT3G25790 species:3702 "Arabi... 142 9.6e-07 1
TAIR|locus:2157146 - symbol:AT5G45580 species:3702 "Arabi... 137 1.6e-06 1
TAIR|locus:2170199 - symbol:AT5G06800 species:3702 "Arabi... 139 2.3e-06 1
TAIR|locus:2204518 - symbol:AT1G14600 "AT1G14600" species... 135 2.4e-06 1
TAIR|locus:2045761 - symbol:AT2G01060 species:3702 "Arabi... 136 2.6e-06 1
TAIR|locus:2041145 - symbol:AT2G02060 species:3702 "Arabi... 133 4.1e-06 1
TAIR|locus:2038957 - symbol:AT2G20400 "AT2G20400" species... 135 7.2e-06 1
TAIR|locus:2139865 - symbol:PHR1 "phosphate starvation re... 135 7.6e-06 1
TAIR|locus:2205339 - symbol:HRS1 "HYPERSENSITIVITY TO LOW... 133 9.0e-06 1
TAIR|locus:2087740 - symbol:AT3G12730 species:3702 "Arabi... 128 1.2e-05 1
TAIR|locus:2093726 - symbol:AT3G24120 species:3702 "Arabi... 130 1.4e-05 1
TAIR|locus:2206415 - symbol:APL "ALTERED PHLOEM DEVELOPME... 132 2.1e-05 2
TAIR|locus:2010297 - symbol:AT1G49560 "AT1G49560" species... 129 2.3e-05 1
TAIR|locus:2171427 - symbol:KAN "KANADI" species:3702 "Ar... 130 2.6e-05 1
TAIR|locus:2119425 - symbol:UNE16 "unfertilized embryo sa... 127 3.0e-05 1
TAIR|locus:2051572 - symbol:AT2G06020 "AT2G06020" species... 126 4.1e-05 1
TAIR|locus:2063141 - symbol:AT2G40260 "AT2G40260" species... 127 5.8e-05 1
TAIR|locus:2041539 - symbol:AT2G42660 "AT2G42660" species... 120 0.00013 1
TAIR|locus:2163852 - symbol:ATS "AT5G42630" species:3702 ... 120 0.00016 1
TAIR|locus:505006489 - symbol:KAN3 "AT4G17695" species:37... 119 0.00028 1
TAIR|locus:2028346 - symbol:KAN2 "AT1G32240" species:3702... 117 0.00067 1
TAIR|locus:2042927 - symbol:AT2G38300 "AT2G38300" species... 116 0.00068 1
>TAIR|locus:2008585 [details] [associations]
symbol:ARR11 "response regulator 11" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG0745 InterPro:IPR017053
PIRSF:PIRSF036392 EMBL:AJ005194 EMBL:AC008113 EMBL:BT008768
EMBL:AB041532 IPI:IPI00521272 PIR:C96700 PIR:T52034 PIR:T52074
RefSeq:NP_176938.1 UniGene:At.121 ProteinModelPortal:Q9FXD6
SMR:Q9FXD6 IntAct:Q9FXD6 STRING:Q9FXD6 EnsemblPlants:AT1G67710.1
GeneID:843096 KEGG:ath:AT1G67710 GeneFarm:3922 TAIR:At1g67710
HOGENOM:HOG000116485 InParanoid:Q9FXD6 OMA:WITRYDE PhylomeDB:Q9FXD6
ProtClustDB:CLSN2914476 Genevestigator:Q9FXD6 GermOnline:AT1G67710
Uniprot:Q9FXD6
Length = 521
Score = 599 (215.9 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 145/270 (53%), Positives = 176/270 (65%)
Query: 1 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFE--SI 58
MSVDGETSRVMKGVQHGACDYLLKPIRMKEL+ IWQHV RKK+ EVRDIE G+E +
Sbjct: 89 MSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGC-GYEGGAD 147
Query: 59 HMTRSGSDQSVDGPLLTGEDLTSVRKRKDA--ENR--HDDRDCGDASSTKKARVVWSIDL 114
+TR + G GED++ +KRKD E + D+ D +SS+KKARVVWS +L
Sbjct: 148 WITRYDEAHFLGG----GEDVSFGKKRKDFDFEKKLLQDESD-PSSSSSKKARVVWSFEL 202
Query: 115 HQKFVKAVNQIGFD-KVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKD-ELKTSV 172
H KFV AVNQIG D K GPKKILDLMNVPWLTRENVASHLQKYRLYL+RL+K ELK
Sbjct: 203 HHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLEKGKELKCYS 262
Query: 173 GGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQNVDAKSLEGDVKGI 232
GG+K DS KD + G Q+ Y FSG NS++Q K+ E D K +
Sbjct: 263 GGVKNADSSPKDVEVNSGYQSP---------GRSSYVFSGGNSLIQ----KATEIDPKPL 309
Query: 233 DTIPVTGHKRVLTVDIPNSHKARCSQIGFN 262
+ ++ L D+ K + ++IGF+
Sbjct: 310 ASASLSD----LNTDVIMPPKTKKTRIGFD 335
Score = 171 (65.3 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 61/170 (35%), Positives = 85/170 (50%)
Query: 325 QSGPSASSKPSVVDKDNLKPFDCTYKSNYPNAIPIGSAVDTFPV-QTTSPIVNHQPFEPI 383
QS A+S PS+++++ P++ + NA D F + Q P V Q +P
Sbjct: 376 QSSYVANSAPSLMEEEMKPPYETPAGGSSVNA-------DEFLMPQDKIPTVTLQDLDP- 427
Query: 384 ARTTSSMKSQGLNLSCIPDLEAAQRNINWGVGSS--LTSLDEDLQLCWLQGDCFAMNLGL 441
S+MK Q N EA R++NW + S SLD DL L WLQG+ F N GL
Sbjct: 428 ----SAMKLQEFNT------EAILRSLNWELPESHHSVSLDTDLDLTWLQGERFLANTGL 477
Query: 442 QDINFSEYND-PALNSEVPFHLYDTMRFDYEHYYDPTECP-IIDQGLFIA 489
Q F +Y+ P+L SE+P HL + E DP E ++DQGLFI+
Sbjct: 478 Q---FQDYSSSPSLLSELPAHLN---WYGNERLPDPDEYSFMVDQGLFIS 521
>TAIR|locus:2065398 [details] [associations]
symbol:RR14 "response regulator 14" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0010029 "regulation of seed
germination" evidence=RCA] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=RCA] [GO:0048831 "regulation of shoot
system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG0745 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AC006069
EMBL:AY099726 EMBL:AY128887 EMBL:AY088149 IPI:IPI00545640
PIR:G84428 RefSeq:NP_178285.1 UniGene:At.42470
ProteinModelPortal:Q8L9Y3 SMR:Q8L9Y3 IntAct:Q8L9Y3 STRING:Q8L9Y3
EnsemblPlants:AT2G01760.1 GeneID:814707 KEGG:ath:AT2G01760
GeneFarm:3930 TAIR:At2g01760 HOGENOM:HOG000034077 InParanoid:Q8L9Y3
OMA:SWILERS PhylomeDB:Q8L9Y3 ProtClustDB:CLSN2913129
Genevestigator:Q8L9Y3 GermOnline:AT2G01760 Uniprot:Q8L9Y3
Length = 382
Score = 420 (152.9 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 89/171 (52%), Positives = 117/171 (68%)
Query: 1 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 60
MSVDG T+ VM G+ HGACDYL+KPIR +EL+NIWQHV R+K +++ + + E
Sbjct: 90 MSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALED--N 147
Query: 61 TRSGSDQSVDGPL--LTGEDLTSVRKRKDAENRHDDRDCG------DASSTKKARVVWSI 112
SGS ++V + + E L R +K + R DRD D ++KK+RVVWSI
Sbjct: 148 KNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNSKKSRVVWSI 207
Query: 113 DLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 163
+LHQ+FV AVN++G DK PK+IL+LMNVP L+RENVASHLQK+RLYL RL
Sbjct: 208 ELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENVASHLQKFRLYLKRL 258
Score = 39 (18.8 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 185 SAASFGIQNSITVHHHNDVSNGGYRFS-GSN 214
S A G+ +S DV+N R GSN
Sbjct: 337 SVAVHGLSSSANFRQRGDVNNNRIRQGYGSN 367
>TAIR|locus:2040194 [details] [associations]
symbol:RR12 "response regulator 12" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IGI;TAS]
[GO:0009735 "response to cytokinin stimulus" evidence=IGI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 GO:GO:0010380
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0080022
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 GO:GO:0048367
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 KO:K14491 eggNOG:COG2204 HOGENOM:HOG000238840
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:BE522295
IPI:IPI00541861 IPI:IPI01019479 RefSeq:NP_180090.6 UniGene:At.19775
ProteinModelPortal:P62598 SMR:P62598 IntAct:P62598 STRING:P62598
GeneID:817056 KEGG:ath:AT2G25180 GeneFarm:3926 TAIR:At2g25180
InParanoid:P62598 OMA:QQAIMAN ArrayExpress:P62598
Genevestigator:P62598 GermOnline:AT2G25180 Uniprot:P62598
Length = 596
Score = 409 (149.0 bits), Expect = 4.1e-38, P = 4.1e-38
Identities = 96/230 (41%), Positives = 133/230 (57%)
Query: 1 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 60
+S + VMKGV HGACDYLLKP+R++EL+NIWQHV R + + R N G +
Sbjct: 95 LSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNRGSNN-NGDKR--- 150
Query: 61 TRSGSDQSVDGPLLTGEDLTSVRKRKDA--ENRHDDRDCGDAS-STKKARVVWSIDLHQK 117
SG++ + G+ RKRKD E+ +DRD D S + KK RVVW+++LH+K
Sbjct: 151 DGSGNEGVGNSDQNNGK---GNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKK 207
Query: 118 FVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQ 177
FV AVNQ+G++K PKKILDLMNV LTRENVASHLQK+RLYL R + G+
Sbjct: 208 FVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKR---------ISGVAN 258
Query: 178 KDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQNVDAKSLEG 227
+ + +S F N + HH + G ++ G +++ + G
Sbjct: 259 QQAIMANSELHFMQMNGLDGFHHRPIPVGSGQYHGGAPAMRSFPPNGILG 308
>TAIR|locus:2130095 [details] [associations]
symbol:RR2 "response regulator 2" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA;TAS] [GO:0009723 "response
to ethylene stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IEP;IGI] [GO:0010150 "leaf senescence"
evidence=IMP] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IMP] [GO:0010119 "regulation of stomatal movement"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0010029 "regulation of seed germination" evidence=RCA]
[GO:0031537 "regulation of anthocyanin metabolic process"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009873 GO:GO:0010119 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010150 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009736 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 EMBL:Z97340 EMBL:AL161543 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491
eggNOG:COG2204 InterPro:IPR017053 PIRSF:PIRSF036392
ProtClustDB:CLSN2680844 EMBL:AB016472 EMBL:AJ005196 EMBL:DQ473518
EMBL:DQ473519 EMBL:DQ473520 EMBL:DQ473521 EMBL:AK175378
EMBL:AK175737 EMBL:AK175959 EMBL:AK176614 IPI:IPI00518324
PIR:D71427 PIR:T51247 RefSeq:NP_193346.4 UniGene:At.21955
ProteinModelPortal:Q9ZWJ9 SMR:Q9ZWJ9 IntAct:Q9ZWJ9 STRING:Q9ZWJ9
PaxDb:Q9ZWJ9 PRIDE:Q9ZWJ9 EnsemblPlants:AT4G16110.1 GeneID:827297
KEGG:ath:AT4G16110 GeneFarm:3921 TAIR:At4g16110 InParanoid:Q9ZWJ9
OMA:ILERMLM PhylomeDB:Q9ZWJ9 Genevestigator:Q9ZWJ9
GermOnline:AT4G16110 Uniprot:Q9ZWJ9
Length = 664
Score = 404 (147.3 bits), Expect = 4.0e-37, P = 4.0e-37
Identities = 90/171 (52%), Positives = 116/171 (67%)
Query: 1 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIEN----IE--G 54
MS D S V+KGV HGA DYL+KP+R++ L+NIWQHV RKK +E E+ IE G
Sbjct: 106 MSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTG 165
Query: 55 FESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAE--NRHDDRDCGDASSTKKARVVWSI 112
+ + D + + + S RKRK+ E ++ DD++ D+SS KK RVVWS+
Sbjct: 166 GDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKE--DSSSLKKPRVVWSV 223
Query: 113 DLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 163
+LHQ+FV AVNQ+G DK PKKIL++MNVP LTRENVASHLQKYR+YL RL
Sbjct: 224 ELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRL 274
>TAIR|locus:2093668 [details] [associations]
symbol:RR1 "response regulator 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI;RCA] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0010029
"regulation of seed germination" evidence=RCA] [GO:0010043
"response to zinc ion" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] [GO:0048831 "regulation of
shoot system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 eggNOG:COG0745
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB016471
EMBL:AP001308 EMBL:AB028608 EMBL:AY056099 EMBL:AK316883
IPI:IPI00534841 IPI:IPI00547650 PIR:T51246 RefSeq:NP_566561.2
RefSeq:NP_850600.2 UniGene:At.183 UniGene:At.48672
ProteinModelPortal:Q940D0 SMR:Q940D0 IntAct:Q940D0 STRING:Q940D0
PaxDb:Q940D0 PRIDE:Q940D0 EnsemblPlants:AT3G16857.2 GeneID:820940
KEGG:ath:AT3G16857 GeneFarm:3920 TAIR:At3g16857
HOGENOM:HOG000034078 InParanoid:Q940D0 OMA:RTCLYEV PhylomeDB:Q940D0
ProtClustDB:CLSN2680844 Genevestigator:Q940D0 GermOnline:AT3G16857
Uniprot:Q940D0
Length = 690
Score = 291 (107.5 bits), Expect = 3.5e-34, Sum P(2) = 3.5e-34
Identities = 70/134 (52%), Positives = 87/134 (64%)
Query: 63 SGSDQSVD---GPLLTGEDL-TSVRKRKDAENRH--DDRDCGDASSTKKARVVWSIDLHQ 116
SG + +VD + G + +S RKRKD E DD+D DAS+ KK RVVWS++LHQ
Sbjct: 190 SGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKD-EDASNLKKPRVVWSVELHQ 248
Query: 117 KFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIK 176
+FV AVNQ+G +K PKKIL+LMNVP LTRENVASHLQKYR+YL RL + G +
Sbjct: 249 QFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRL--GGVSQHQGNLN 306
Query: 177 QKDSPSKDSAASFG 190
+D ASFG
Sbjct: 307 NSFMTGQD--ASFG 318
Score = 151 (58.2 bits), Expect = 3.5e-34, Sum P(2) = 3.5e-34
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 1 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHE 45
MS D S V+KGV HGA DYL+KP+RM+ L+NIWQHV RK+ E
Sbjct: 115 MSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSE 159
>TAIR|locus:2116587 [details] [associations]
symbol:RR10 "response regulator 10" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0010380 "regulation of chlorophyll biosynthetic
process" evidence=IGI] [GO:0031537 "regulation of anthocyanin
metabolic process" evidence=IGI;RCA] [GO:0048367 "shoot system
development" evidence=IGI] [GO:0080022 "primary root development"
evidence=IGI] [GO:0010029 "regulation of seed germination"
evidence=RCA] [GO:0048831 "regulation of shoot system development"
evidence=RCA] InterPro:IPR001005 InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009736
GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 EMBL:AJ005195
EMBL:AL021636 EMBL:AL161580 EMBL:BT003158 IPI:IPI00544491
PIR:T04653 RefSeq:NP_194920.1 UniGene:At.122 PDB:1IRZ PDBsum:1IRZ
ProteinModelPortal:O49397 SMR:O49397 IntAct:O49397 STRING:O49397
PRIDE:O49397 EnsemblPlants:AT4G31920.1 GeneID:829322
KEGG:ath:AT4G31920 GeneFarm:2450 TAIR:At4g31920 eggNOG:COG2204
HOGENOM:HOG000238840 InParanoid:O49397 OMA:THELHNK PhylomeDB:O49397
ProtClustDB:CLSN2685991 EvolutionaryTrace:O49397
Genevestigator:O49397 GermOnline:AT4G31920 GO:GO:0031537
InterPro:IPR017053 PIRSF:PIRSF036392 Uniprot:O49397
Length = 552
Score = 341 (125.1 bits), Expect = 3.8e-29, P = 3.8e-29
Identities = 82/219 (37%), Positives = 124/219 (56%)
Query: 1 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESIHM 60
+S + VMKGV+HGACDYLLKP+R++EL+NIWQHV RK + ++ N+
Sbjct: 95 LSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLK-KNKSNVS------- 146
Query: 61 TRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVK 120
+GS E + ++ E R +D D D ++ KK RV+W+ +LH KF+
Sbjct: 147 --NGSGNCDKANRKRKEQY----EEEEEEERGNDND--DPTAQKKPRVLWTHELHNKFLA 198
Query: 121 AVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDS 180
AV+ +G ++ PKKILDLMNV LTRENVASHLQK+R+ L ++ D ++ + DS
Sbjct: 199 AVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKKVSDDAIQQA--NRAAIDS 256
Query: 181 PSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQN 219
+ G+ HHH + G +F G +++++
Sbjct: 257 HFMQMNSQKGLGGFY--HHHRGIPVGSGQFHGGTTMMRH 293
>UNIPROTKB|Q7Y0W3 [details] [associations]
symbol:Q7Y0W3 "Two-component response regulator EHD1"
species:39946 "Oryza sativa Indica Group" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0048576 "positive regulation of short-day
photoperiodism, flowering" evidence=IMP] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
eggNOG:NOG265546 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB092508
ProteinModelPortal:Q7Y0W3 SMR:Q7Y0W3 KEGG:dosa:Os10t0463400-01
Gramene:Q7Y0W3 HOGENOM:HOG000084878 GO:GO:0048576 Uniprot:Q7Y0W3
Length = 341
Score = 296 (109.3 bits), Expect = 8.3e-26, P = 8.3e-26
Identities = 67/169 (39%), Positives = 100/169 (59%)
Query: 1 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRD---IENIE--GF 55
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + N+E G
Sbjct: 89 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 148
Query: 56 ESIHMTRSGSDQSVDGPLLTGEDLTSVRK--RKDAENRHDDRDCGDASSTKKARVVWSID 113
+ + + + T L + R D N + + D K+R+ W+
Sbjct: 149 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGE--ITDIRDLGKSRLTWTTQ 206
Query: 114 LHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 162
LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 207 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 255
>UNIPROTKB|Q7Y0W5 [details] [associations]
symbol:EHD1 "Two-component response regulator EHD1"
species:39947 "Oryza sativa Japonica Group" [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 GO:GO:0006355 GO:GO:0035556 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:DP000086 EMBL:CM000147 GO:GO:0009908 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
InterPro:IPR017053 PIRSF:PIRSF036392 GO:GO:0048576 EMBL:AB092506
EMBL:AB092507 EMBL:AC027038 ProteinModelPortal:Q7Y0W5
Gramene:Q7Y0W5 eggNOG:KOG1601 Uniprot:Q7Y0W5
Length = 341
Score = 296 (109.3 bits), Expect = 8.3e-26, P = 8.3e-26
Identities = 67/169 (39%), Positives = 100/169 (59%)
Query: 1 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRD---IENIE--GF 55
M+ G+T+ VMK V +GA D+LLKP+R++EL NIWQH+FRK++ + ++ + N+E G
Sbjct: 89 MASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGH 148
Query: 56 ESIHMTRSGSDQSVDGPLLTGEDLTSVRK--RKDAENRHDDRDCGDASSTKKARVVWSID 113
+ + + + T L + R D N + + D K+R+ W+
Sbjct: 149 PPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGE--ITDIRDLGKSRLTWTTQ 206
Query: 114 LHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR 162
LH++F+ AVN +G DK PKKIL +M V LTRE VASHLQKYR+ L +
Sbjct: 207 LHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKK 255
>TAIR|locus:2155954 [details] [associations]
symbol:APRR4 "pseudo-response regulator 4" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 PROSITE:PS50110
SMART:SM00448 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0035556 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AB016872 IPI:IPI00535768 RefSeq:NP_199735.1
UniGene:At.55447 ProteinModelPortal:Q9FJ16 SMR:Q9FJ16
EnsemblPlants:AT5G49240.1 GeneID:834984 KEGG:ath:AT5G49240
GeneFarm:4344 TAIR:At5g49240 eggNOG:NOG265546 HOGENOM:HOG000029456
InParanoid:Q9FJ16 KO:K14491 OMA:SEIGSEM PhylomeDB:Q9FJ16
ProtClustDB:CLSN2916474 Genevestigator:Q9FJ16 GermOnline:AT5G49240
Uniprot:Q9FJ16
Length = 292
Score = 277 (102.6 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 62/155 (40%), Positives = 94/155 (60%)
Query: 1 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESI-H 59
+S D V K + +GA DYL+KPIR ++LR +++H+ KK+ E R + E ++
Sbjct: 120 ISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLV-KKMRERRSVVTGEAEKAAGE 178
Query: 60 MTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFV 119
+ S D ++ P + + + + E+RHD D ASS KK RVVW +LHQ F+
Sbjct: 179 KSSSVGDSTIRNPNKSKRS-SCLEAEVNEEDRHDHNDRACASSAKKRRVVWDEELHQNFL 237
Query: 120 KAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQ 154
AV+ +G ++ PKKILD+M V +++RENVASHLQ
Sbjct: 238 NAVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
>TAIR|locus:2141020 [details] [associations]
symbol:APRR2 species:3702 "Arabidopsis thaliana"
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA;ISS] [GO:0000160 "phosphorelay signal transduction
system" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL021889
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB041531
EMBL:AF385725 EMBL:AY143963 IPI:IPI00524902 IPI:IPI00542892
PIR:T05088 RefSeq:NP_001078405.1 RefSeq:NP_001154250.1
RefSeq:NP_001190759.1 RefSeq:NP_567548.1 RefSeq:NP_849403.1
RefSeq:NP_849404.2 UniGene:At.25394 ProteinModelPortal:Q6LA43
SMR:Q6LA43 IntAct:Q6LA43 STRING:Q6LA43 EnsemblPlants:AT4G18020.1
EnsemblPlants:AT4G18020.2 EnsemblPlants:AT4G18020.3
EnsemblPlants:AT4G18020.6 GeneID:827527 KEGG:ath:AT4G18020
GeneFarm:4314 TAIR:At4g18020 eggNOG:NOG268152 HOGENOM:HOG000005909
InParanoid:Q6LA43 OMA:TIMISTD PhylomeDB:Q6LA43
ProtClustDB:CLSN2689492 Genevestigator:Q6LA43 GermOnline:AT4G18020
Uniprot:Q6LA43
Length = 535
Score = 177 (67.4 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 41/108 (37%), Positives = 66/108 (61%)
Query: 66 DQSVDGPLLTGE-DLTSVRKRKDAENRHDDRDCG----DASSTKKARVVWSIDLHQKFVK 120
++ G L++ + D + K++D E + ++ G + T + +V W+ +LH+KFV+
Sbjct: 253 EEGETGDLISEKTDSVDIHKKED-ETKPINKSSGIKNVSGNKTSRKKVDWTPELHKKFVQ 311
Query: 121 AVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTR-LQKDE 167
AV Q+G D+ P +IL+LM V LTR NVASHLQK+R + L KD+
Sbjct: 312 AVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDD 359
Score = 89 (36.4 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 1 MSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKKIHE 45
+S D + MK + GA ++L KP+ ++L+NIWQHV K ++
Sbjct: 101 ISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQHVVHKAFND 145
>TAIR|locus:2058445 [details] [associations]
symbol:MYBC1 "AT2G40970" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009409 "response to cold" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009409 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC004261
HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002409 EMBL:AY072381
EMBL:BT000098 IPI:IPI00539516 PIR:T00761 RefSeq:NP_181630.1
UniGene:At.27776 ProteinModelPortal:O22210 SMR:O22210
EnsemblPlants:AT2G40970.1 GeneID:818697 KEGG:ath:AT2G40970
TAIR:At2g40970 eggNOG:NOG255246 HOGENOM:HOG000238691
InParanoid:O22210 OMA:RYEDSEY PhylomeDB:O22210
ProtClustDB:CLSN2913178 ArrayExpress:O22210 Genevestigator:O22210
Uniprot:O22210
Length = 248
Score = 190 (71.9 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 39/75 (52%), Positives = 49/75 (65%)
Query: 100 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 159
A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQKYRLY
Sbjct: 100 ARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLY 159
Query: 160 LTRLQKDELKTSVGG 174
L R+Q GG
Sbjct: 160 LRRMQGGNGNGITGG 174
>TAIR|locus:2148348 [details] [associations]
symbol:BOA "AT5G59570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0009909 "regulation of flower development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB025604
GO:GO:0009909 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT026065 EMBL:AK117348
EMBL:AB206577 IPI:IPI00538187 RefSeq:NP_200765.1 UniGene:At.29219
ProteinModelPortal:Q9LTH4 SMR:Q9LTH4 STRING:Q9LTH4
EnsemblPlants:AT5G59570.1 GeneID:836076 KEGG:ath:AT5G59570
TAIR:At5g59570 InParanoid:Q9LTH4 OMA:ERSRTIH PhylomeDB:Q9LTH4
ProtClustDB:CLSN2685121 Genevestigator:Q9LTH4 Uniprot:Q9LTH4
Length = 298
Score = 193 (73.0 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 41/81 (50%), Positives = 53/81 (65%)
Query: 86 KDAENRHDDRDCGDAS--STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPW 143
+D+ D DAS ++K+ R+VW+ LH++FV V +G PK I+ LMNV
Sbjct: 120 EDSTAEEGDSGPEDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEG 179
Query: 144 LTRENVASHLQKYRLYLTRLQ 164
LTRENVASHLQKYRLYL R+Q
Sbjct: 180 LTRENVASHLQKYRLYLKRIQ 200
>TAIR|locus:2175364 [details] [associations]
symbol:AT5G05090 "AT5G05090" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002688
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AB005245 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY093188
EMBL:BT006289 IPI:IPI00523871 RefSeq:NP_196128.1 UniGene:At.33034
ProteinModelPortal:Q9FF65 SMR:Q9FF65 PRIDE:Q9FF65
EnsemblPlants:AT5G05090.1 GeneID:830391 KEGG:ath:AT5G05090
TAIR:At5g05090 InParanoid:Q9FF65 OMA:MREEDSN PhylomeDB:Q9FF65
ProtClustDB:CLSN2716677 ArrayExpress:Q9FF65 Genevestigator:Q9FF65
Uniprot:Q9FF65
Length = 266
Score = 186 (70.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 40/85 (47%), Positives = 52/85 (61%)
Query: 80 TSVRKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLM 139
T + AE D A + K+ R+VW+ LH++FV AV +G PK I+ LM
Sbjct: 56 TPPQPNSSAEIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLM 115
Query: 140 NVPWLTRENVASHLQKYRLYLTRLQ 164
+V LTRENVASHLQKYRLYL R++
Sbjct: 116 SVDGLTRENVASHLQKYRLYLKRMK 140
>TAIR|locus:2103247 [details] [associations]
symbol:AT3G10760 "AT3G10760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
EMBL:AC011708 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000238691 ProtClustDB:CLSN2716677
IPI:IPI00530545 RefSeq:NP_187687.1 UniGene:At.39869
ProteinModelPortal:Q9SG82 SMR:Q9SG82 PRIDE:Q9SG82
EnsemblPlants:AT3G10760.1 GeneID:820245 KEGG:ath:AT3G10760
TAIR:At3g10760 eggNOG:NOG312708 InParanoid:Q9SG82 OMA:FARWEEE
PhylomeDB:Q9SG82 Genevestigator:Q9SG82 Uniprot:Q9SG82
Length = 335
Score = 188 (71.2 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 39/69 (56%), Positives = 49/69 (71%)
Query: 98 GD--ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQK 155
GD A + K+ R+VW+ LH++FV AV +G PK I+ LM+V LTRENVASHLQK
Sbjct: 96 GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQK 155
Query: 156 YRLYLTRLQ 164
YRLYL R+Q
Sbjct: 156 YRLYLKRMQ 164
>TAIR|locus:2167639 [details] [associations]
symbol:GLK2 "AT5G44190" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IMP;IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009910 "negative regulation of flower
development" evidence=IGI] [GO:0010380 "regulation of chlorophyll
biosynthetic process" evidence=IGI] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006417 "regulation of translation" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0009657
"plastid organization" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010207 "photosystem II assembly" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0003682 EMBL:AB005239
GO:GO:0009658 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
PROSITE:PS51293 GO:GO:0009910 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237698 EMBL:AB062490 EMBL:AY026773 EMBL:AY028368
EMBL:AY050386 EMBL:AY124819 IPI:IPI00535889 RefSeq:NP_199232.1
UniGene:At.19638 ProteinModelPortal:Q9FFH0 SMR:Q9FFH0 STRING:Q9FFH0
EnsemblPlants:AT5G44190.1 GeneID:834442 KEGG:ath:AT5G44190
TAIR:At5g44190 eggNOG:NOG271712 InParanoid:Q9FFH0 OMA:QEMEGNT
PhylomeDB:Q9FFH0 ProtClustDB:CLSN2916711 Genevestigator:Q9FFH0
Uniprot:Q9FFH0
Length = 386
Score = 186 (70.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 40/95 (42%), Positives = 58/95 (61%)
Query: 85 RKDAENRHDDRDC-GDASSTKKA-RVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVP 142
R+ +DC D + KK +V W+ +LH+KFV+AV Q+G DK P +IL++MNV
Sbjct: 125 RRGKRKGKKSKDCLSDENDIKKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVK 184
Query: 143 WLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQ 177
LTR NVASHLQKYR + L E + + +++
Sbjct: 185 SLTRHNVASHLQKYRSHRKHLLAREAEAASWNLRR 219
>UNIPROTKB|Q5Z5I4 [details] [associations]
symbol:GLK1 "Probable transcription factor GLK1"
species:39947 "Oryza sativa Japonica Group" [GO:0010638 "positive
regulation of organelle organization" evidence=IGI] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IGI]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 EMBL:AP008212 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AP005688 EMBL:AK061946 EMBL:AK065184
EMBL:AK098909 EMBL:AK122161 RefSeq:NP_001057583.2 UniGene:Os.3340
ProteinModelPortal:Q5Z5I4 STRING:Q5Z5I4
EnsemblPlants:LOC_Os06g24070.1 GeneID:4340977 KEGG:osa:4340977
Gramene:Q5Z5I4 eggNOG:NOG283574 HOGENOM:HOG000237698 OMA:IDSLTRH
ProtClustDB:CLSN2696175 GO:GO:0010638 Uniprot:Q5Z5I4
Length = 455
Score = 185 (70.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 35/72 (48%), Positives = 51/72 (70%)
Query: 86 KDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLT 145
++AE+RH + KKA+V W+ +LH++FV+AV Q+G DK P +IL++M + LT
Sbjct: 162 QEAESRHKSSS-KSSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLT 220
Query: 146 RENVASHLQKYR 157
R N+ASHLQKYR
Sbjct: 221 RHNIASHLQKYR 232
>TAIR|locus:2199342 [details] [associations]
symbol:APRR6 "pseudo-response regulator 6" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] InterPro:IPR001789
InterPro:IPR009057 Pfam:PF00072 PROSITE:PS50110 SMART:SM00448
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
GO:GO:0035556 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC016447 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 InterPro:IPR006447 TIGRFAMs:TIGR01557 KO:K14491
IPI:IPI00522591 IPI:IPI01020037 PIR:E96705 RefSeq:NP_176988.4
UniGene:At.52431 ProteinModelPortal:Q9C9F6 SMR:Q9C9F6 PaxDb:Q9C9F6
PRIDE:Q9C9F6 GeneID:843150 KEGG:ath:AT1G68210 GeneFarm:4346
TAIR:At1g68210 eggNOG:NOG320519 OMA:IANIEMP Genevestigator:Q9C9F6
Uniprot:Q9C9F6
Length = 755
Score = 144 (55.7 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 54/209 (25%), Positives = 98/209 (46%)
Query: 102 STKKARVVWSIDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLT 161
S + + +W+ + H KF+ A++ +G + PK IL++MN P LT V SHLQKY+ +
Sbjct: 219 SVGRRKSLWNSERHMKFIAAISILGEEDFRPKSILEIMNDPNLTHRQVGSHLQKYKAQID 278
Query: 162 RLQKDELKTSVGGI-KQKDSPS--KDSAASFGIQNSITVHHHNDVSNG-GYRFSGSNSVV 217
++ + I K + PS K + N++ V N + N + S S S+
Sbjct: 279 QISYTLPRNESRSIDKTFEYPSNYKYPFKISDLTNNLIVS--NSLWNSLEKKNSASASIT 336
Query: 218 QNVDAKSLEGDVKGIDTIPVTGHKRVLTVDIPNSHKARCSQIGFNGSFVPG----HSDVN 273
Q + K + G+ + +T+P L + + H +++ N +FVP + N
Sbjct: 337 QFLFKKPI-GEKE--ETMPKFHIGGKLDLSNHSVHGNVLNKLSMNVNFVPSTISNNPAYN 393
Query: 274 FTSFDSA-IPTQPWSEVSETQFQHEHKPL 301
S DS+ I + ++ + T E+ P+
Sbjct: 394 ILSIDSSSIDSSSYTGLVSTGLSSENSPI 422
Score = 91 (37.1 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 18 ACDYLLKPIRMKELRNIWQHVFRKKIHEVRDIENIEGFESI 58
AC L KPI +++N+WQHVF KK E++ I E E++
Sbjct: 107 ACFSLDKPISNDDIKNMWQHVFSKKSQELKKINITEDQENV 147
>TAIR|locus:2148720 [details] [associations]
symbol:PHL1 "AT5G29000" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AC018632 EMBL:BT002344 EMBL:AY085154 IPI:IPI00527102
IPI:IPI00527253 IPI:IPI00891441 RefSeq:NP_001078629.1
RefSeq:NP_001119299.1 RefSeq:NP_568512.3 RefSeq:NP_851090.1
UniGene:At.26183 ProteinModelPortal:Q8GUN5 SMR:Q8GUN5 PRIDE:Q8GUN5
EnsemblPlants:AT5G29000.2 GeneID:833026 KEGG:ath:AT5G29000
TAIR:At5g29000 eggNOG:NOG275266 InParanoid:Q8GUN5 OMA:DSSSHNP
PhylomeDB:Q8GUN5 ProtClustDB:CLSN2680328 Genevestigator:Q8GUN5
Uniprot:Q8GUN5
Length = 413
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 41/123 (33%), Positives = 71/123 (57%)
Query: 78 DLTSVRKRK--DAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIG-FDKVGPKK 134
D+T+ ++++ +E++ R+ + +T K R+ W+ +LH+ FV+AVNQ+G ++ PK
Sbjct: 202 DITANQQQQMVSSEDQLSGRNSSSSVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKA 261
Query: 135 ILDLMNVPWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNS 194
+L L+N P LT +V SHLQKYR T K E G ++K S + S ++ S
Sbjct: 262 VLKLLNNPGLTIYHVKSHLQKYR---TARYKPETSEVTGEPQEKKMTSIEDIKSLDMKTS 318
Query: 195 ITV 197
+ +
Sbjct: 319 VEI 321
>TAIR|locus:2026739 [details] [associations]
symbol:AT1G69580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 EMBL:AC021046 IPI:IPI00846148
RefSeq:NP_001077798.1 UniGene:At.52449 ProteinModelPortal:A8MSE5
SMR:A8MSE5 PRIDE:A8MSE5 EnsemblPlants:AT1G69580.2 GeneID:843294
KEGG:ath:AT1G69580 TAIR:At1g69580 eggNOG:NOG249461 OMA:MEINNNA
PhylomeDB:A8MSE5 ProtClustDB:CLSN2699064 ArrayExpress:A8MSE5
Genevestigator:A8MSE5 Uniprot:A8MSE5
Length = 337
Score = 165 (63.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 41/125 (32%), Positives = 67/125 (53%)
Query: 101 SSTKKARVVWSIDLHQKFVKAVNQIGF-DKVGPKKILDLMNVPWLTRENVASHLQKYRLY 159
S+ K R+ W+ DLH KF++AVNQ+G +K PK ++ +M +P LT ++ SHLQKYRL
Sbjct: 30 STDAKPRLKWTCDLHHKFIEAVNQLGGPNKATPKGLMKVMEIPGLTLYHLKSHLQKYRLG 89
Query: 160 LT-RLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQ 218
+ + ++L+ S Q+ DS G S+T + N + G + + + +
Sbjct: 90 KSMKFDDNKLEVSSASENQEVESKNDSRDLRGC--SVTEENSNPAKDRGLQITEALQMQM 147
Query: 219 NVDAK 223
V K
Sbjct: 148 EVQKK 152
>TAIR|locus:2172394 [details] [associations]
symbol:MYR1 "myb-related protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002688 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB012246
HSSP:O49397 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
IPI:IPI00538966 RefSeq:NP_197325.1 RefSeq:NP_974798.1
UniGene:At.7556 ProteinModelPortal:Q9FK47 SMR:Q9FK47
EnsemblPlants:AT5G18240.1 EnsemblPlants:AT5G18240.4 GeneID:831942
KEGG:ath:AT5G18240 TAIR:At5g18240 InParanoid:Q9FK47 OMA:LETHTRT
PhylomeDB:Q9FK47 ProtClustDB:CLSN2686543 Genevestigator:Q9FK47
Uniprot:Q9FK47
Length = 402
Score = 166 (63.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 46/124 (37%), Positives = 68/124 (54%)
Query: 76 GEDLTSVRKRKDAENRHD---DRDCGDA----SSTKKARVVWSIDLHQKFVKAVNQIGF- 127
G+ + S + + RH GD+ S+ K R+ W+ DLH++FV+AVNQ+G
Sbjct: 9 GKSILSSSRMPISSERHPFLRGNGTGDSGLILSTDAKPRLKWTPDLHERFVEAVNQLGGG 68
Query: 128 DKVGPKKILDLMNVPWLTRENVASHLQKYRLY--LTRLQKDEL-KTSVGGIKQKDSPSKD 184
DK PK I+ +M +P LT ++ SHLQKYRL L L KTSV + +++ P D
Sbjct: 69 DKATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNKTSVMTMVEENPPEVD 128
Query: 185 SAAS 188
+ S
Sbjct: 129 ESHS 132
>TAIR|locus:2100880 [details] [associations]
symbol:AT3G04450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR025756 InterPro:IPR017930
InterPro:IPR006447 Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294
IPI:IPI00540345 RefSeq:NP_187095.2 UniGene:At.40835
ProteinModelPortal:F4J3P7 SMR:F4J3P7 PRIDE:F4J3P7
EnsemblPlants:AT3G04450.1 GeneID:819601 KEGG:ath:AT3G04450
OMA:WPDWADQ Uniprot:F4J3P7
Length = 442
Score = 162 (62.1 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 100 ASSTKKARVVWSIDLHQKFVKAVNQIG-FDKVGPKKILDLMNVPWLTRENVASHLQKYRL 158
+S T K R+ W+ +LH+ FV+A+NQ+G ++ PK +L L+N P LT +V SHLQKYR
Sbjct: 233 SSMTSKQRMRWTPELHEAFVEAINQLGGSERATPKAVLKLINSPGLTVYHVKSHLQKYRT 292
Query: 159 --YLTRLQKDELKTSVGGIKQ-KDSPSKDSAASFGIQNSI 195
Y L KD + V +K +D S D S I ++
Sbjct: 293 ARYKPELSKDTEEPLVKNLKTIEDIKSLDLKTSIEITEAL 332
>TAIR|locus:2031210 [details] [associations]
symbol:AT1G25550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010167 "response to nitrate" evidence=RCA] [GO:0015706
"nitrate transport" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684 GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237574
ProtClustDB:CLSN2687960 EMBL:AF326890 EMBL:AF339707 EMBL:AF372906
EMBL:BT002674 IPI:IPI00533337 RefSeq:NP_564236.1 UniGene:At.25159
ProteinModelPortal:Q9FPE8 SMR:Q9FPE8 IntAct:Q9FPE8 STRING:Q9FPE8
PRIDE:Q9FPE8 EnsemblPlants:AT1G25550.1 GeneID:839142
KEGG:ath:AT1G25550 TAIR:At1g25550 InParanoid:Q9FPE8 OMA:ECSERTT
PhylomeDB:Q9FPE8 ArrayExpress:Q9FPE8 Genevestigator:Q9FPE8
Uniprot:Q9FPE8
Length = 344
Score = 156 (60.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 41/108 (37%), Positives = 59/108 (54%)
Query: 102 STKKARVVWSIDLHQKFVKAVNQIGFDKVG-PKKILDLMNVPWLTRENVASHLQKYRLYL 160
S +K R WS +LH++F+ A+ Q+G V PK+I DLM V LT + V SHLQKYRL+
Sbjct: 206 SNRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRDLMKVDGLTNDEVKSHLQKYRLHT 265
Query: 161 TRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGY 208
R ++T GG ++P + F + I V H+ +N Y
Sbjct: 266 RRPATPVVRT--GG----ENPQQ---RQFMVMEGIWVPSHDTTNNRVY 304
>TAIR|locus:2095933 [details] [associations]
symbol:MYR2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011698
ProtClustDB:CLSN2686543 IPI:IPI00524229 RefSeq:NP_001118567.1
UniGene:At.40915 ProteinModelPortal:Q9SQQ9 SMR:Q9SQQ9
EnsemblPlants:AT3G04030.3 GeneID:819558 KEGG:ath:AT3G04030
TAIR:At3g04030 InParanoid:Q9SQQ9 OMA:HITSERH PhylomeDB:Q9SQQ9
Genevestigator:Q9SQQ9 Uniprot:Q9SQQ9
Length = 394
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 101 SSTKKARVVWSIDLHQKFVKAVNQIG-FDKVGPKKILDLMNVPWLTRENVASHLQKYRL 158
S+ K R+ W+ DLH++F++AVNQ+G DK PK I+ +M +P LT ++ SHLQKYRL
Sbjct: 41 STDAKPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRL 99
>TAIR|locus:2063746 [details] [associations]
symbol:AT2G03500 "AT2G03500" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006284
HOGENOM:HOG000237574 EMBL:AY060559 EMBL:AY133630 EMBL:AK221662
IPI:IPI00544167 PIR:B84449 RefSeq:NP_027544.1 UniGene:At.27373
ProteinModelPortal:Q9ZQ85 SMR:Q9ZQ85 IntAct:Q9ZQ85
EnsemblPlants:AT2G03500.1 GeneID:814878 KEGG:ath:AT2G03500
TAIR:At2g03500 eggNOG:NOG301728 InParanoid:Q9ZQ85 OMA:QSYSMLL
PhylomeDB:Q9ZQ85 ProtClustDB:CLSN2687945 ArrayExpress:Q9ZQ85
Genevestigator:Q9ZQ85 Uniprot:Q9ZQ85
Length = 432
Score = 159 (61.0 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 36/75 (48%), Positives = 49/75 (65%)
Query: 100 ASSTKKARVVWSIDLHQKFVKAVNQIGFDKVG-PKKILDLMNVPWLTRENVASHLQKYRL 158
+ S +KAR WS DLH++FV+A+ +G +V PK+I +LM V LT + V SHLQKYRL
Sbjct: 228 SQSNRKARRCWSPDLHRRFVQALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRL 287
Query: 159 YLTRLQKDELKTSVG 173
+ TR +TS G
Sbjct: 288 H-TRRPSPSPQTSGG 301
Score = 38 (18.4 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 307 FTQLPLPGP--RHHIQVDCIQSGPSASS 332
+T P P P HH Q SG +AS+
Sbjct: 355 YTTPPPPQPLHHHHFQTFNGSSGGTAST 382
>TAIR|locus:2026863 [details] [associations]
symbol:AT1G68670 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GO:GO:0009737 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY063886
EMBL:AY091241 IPI:IPI00541260 RefSeq:NP_564938.1 UniGene:At.27154
ProteinModelPortal:Q8VZS3 SMR:Q8VZS3 IntAct:Q8VZS3
EnsemblPlants:AT1G68670.1 GeneID:843197 KEGG:ath:AT1G68670
TAIR:At1g68670 HOGENOM:HOG000237574 InParanoid:Q8VZS3 OMA:EHESSPE
PhylomeDB:Q8VZS3 ProtClustDB:CLSN2687960 ArrayExpress:Q8VZS3
Genevestigator:Q8VZS3 Uniprot:Q8VZS3
Length = 354
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 53/186 (28%), Positives = 89/186 (47%)
Query: 24 KPIRMKELRNIWQHVFRKKIHEVRDIEN-IEGFESIHMTRSGSDQSVDGPLLTGEDLTSV 82
K + +K +Q F+K++ E D++ ++ S+ T + S G G+ + +
Sbjct: 142 KVVEVKPKSGAFQP-FQKRVLET-DLQPAVKVASSMPATTTSSTTETCG----GK--SDL 193
Query: 83 RKRKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVG-PKKILDLMNV 141
K D E R + + + + +K R WS +LH++F+ A+ Q+G V PK+I D M V
Sbjct: 194 IKAGDEERRIEQQQ-SQSHTHRKQRRCWSPELHRRFLNALQQLGGSHVATPKQIRDHMKV 252
Query: 142 PWLTRENVASHLQKYRLYLTRLQKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHN 201
LT + V SHLQKYRL+ R + G +Q+ P + +S +
Sbjct: 253 DGLTNDEVKSHLQKYRLHTRRPAATSVAAQSTGNQQQ--PQFVVVGGIWVPSSQDFPPPS 310
Query: 202 DVSNGG 207
DV+N G
Sbjct: 311 DVANKG 316
>TAIR|locus:2089260 [details] [associations]
symbol:AT3G13040 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY050889 EMBL:AY096674
IPI:IPI00543771 RefSeq:NP_566442.1 RefSeq:NP_974298.1
UniGene:At.11993 ProteinModelPortal:Q949U2 SMR:Q949U2 STRING:Q949U2
PRIDE:Q949U2 EnsemblPlants:AT3G13040.1 EnsemblPlants:AT3G13040.2
GeneID:820490 KEGG:ath:AT3G13040 OMA:RIEEHAK
ProtClustDB:CLSN2688327 ArrayExpress:Q949U2 Genevestigator:Q949U2
Uniprot:Q949U2
Length = 449
Score = 147 (56.8 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 36/88 (40%), Positives = 55/88 (62%)
Query: 100 ASSTKKARVVWSIDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 158
+++ +K+R+ W+ +LH+ FVKAV ++ G +K PK + LMNV LT +V SHLQKYRL
Sbjct: 236 SAANQKSRMRWTPELHESFVKAVIKLEGPEKATPKAVKKLMNVEGLTIYHVKSHLQKYRL 295
Query: 159 YLTRLQKDELKTSVGGIKQKDSPSKDSA 186
+K E K + ++K + SK A
Sbjct: 296 AKYMPEKKEEKRTDNSEEKKLALSKSEA 323
>TAIR|locus:2115070 [details] [associations]
symbol:AT4G37180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00537470
RefSeq:NP_849513.1 UniGene:At.4657 ProteinModelPortal:F4JRB0
SMR:F4JRB0 PRIDE:F4JRB0 EnsemblPlants:AT4G37180.2 GeneID:829872
KEGG:ath:AT4G37180 OMA:SCRNDET Uniprot:F4JRB0
Length = 363
Score = 144 (55.7 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 104 KKARVVWSIDLHQKFVKAVNQIGFDKVG-PKKILDLMNVPWLTRENVASHLQKYRLYLTR 162
K+ R WS +LH+KFV A++++G +V PK+I DLM V LT + V SHLQKYR+++ +
Sbjct: 216 KEQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKSHLQKYRMHIRK 275
Query: 163 LQKDELKTSVG----GIKQKDSPS 182
KT G+ +++S S
Sbjct: 276 HPLHPTKTLSSSDQPGVLERESQS 299
>TAIR|locus:2085984 [details] [associations]
symbol:AT3G25790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
EMBL:AB028607 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237574 ProtClustDB:CLSN2687791 IPI:IPI00546166
RefSeq:NP_566778.1 UniGene:At.37325 ProteinModelPortal:Q9LS00
SMR:Q9LS00 EnsemblPlants:AT3G25790.1 GeneID:822170
KEGG:ath:AT3G25790 TAIR:At3g25790 InParanoid:Q9LS00 OMA:AYKREIS
PhylomeDB:Q9LS00 Genevestigator:Q9LS00 Uniprot:Q9LS00
Length = 357
Score = 142 (55.0 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 98 GDASSTKKARVVWSIDLHQKFVKAVNQIGFDKVG-PKKILDLMNVPWLTRENVASHLQKY 156
G +K R WS +LH++F+ A+ Q+G V PK+I D+M V LT + V SHLQKY
Sbjct: 189 GGRRGQRKNRRCWSQELHRRFLNALKQLGGPHVATPKQIRDIMKVDGLTNDEVKSHLQKY 248
Query: 157 RLYLTR 162
RL+ R
Sbjct: 249 RLHARR 254
>TAIR|locus:2157146 [details] [associations]
symbol:AT5G45580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002688 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00931042
RefSeq:NP_199371.2 UniGene:At.50506 ProteinModelPortal:F4KEK2
SMR:F4KEK2 PRIDE:F4KEK2 DNASU:834596 EnsemblPlants:AT5G45580.1
GeneID:834596 KEGG:ath:AT5G45580 OMA:YQIEVQR Uniprot:F4KEK2
Length = 264
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 43/123 (34%), Positives = 63/123 (51%)
Query: 105 KARVVWSIDLHQKFVKAVNQIG-FDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRL 163
K R+ W+ DLH +FV AV ++G DK PK +L LM + LT ++ SHLQKYRL +
Sbjct: 7 KPRLRWTADLHDRFVDAVAKLGGADKATPKSVLKLMGLKGLTLYHLKSHLQKYRLGQQQG 66
Query: 164 QKDELKTSVGGIKQKDSPSK---DSAASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQNV 220
+K +T K+ S D+ + GI N +H S G F+ ++ V
Sbjct: 67 KKQN-RTEQN--KENAGSSYVHFDNCSQGGISNDSRFDNHQRQS-GNVPFA--EAMRHQV 120
Query: 221 DAK 223
DA+
Sbjct: 121 DAQ 123
>TAIR|locus:2170199 [details] [associations]
symbol:AT5G06800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AK226644 IPI:IPI00528070
RefSeq:NP_196298.2 UniGene:At.50439 ProteinModelPortal:Q0WVU3
SMR:Q0WVU3 PRIDE:Q0WVU3 EnsemblPlants:AT5G06800.1 GeneID:830570
KEGG:ath:AT5G06800 TAIR:At5g06800 eggNOG:NOG298644
HOGENOM:HOG000241107 InParanoid:Q0WVU3 OMA:MDNINFE
ProtClustDB:CLSN2918619 Genevestigator:Q0WVU3 Uniprot:Q0WVU3
Length = 375
Score = 139 (54.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 35/81 (43%), Positives = 48/81 (59%)
Query: 105 KARVVWSIDLHQKFVKAVNQIG-FDKVGPKKILDLMNVPWLTRENVASHLQKYRL--YLT 161
K R+ W+ DLH+KFV+ VN++G DK PK IL M+ LT +V SHLQKYR+ Y+
Sbjct: 192 KTRIRWTQDLHEKFVECVNRLGGADKATPKAILKRMDSDGLTIFHVKSHLQKYRIAKYMP 251
Query: 162 RLQ--KDELKTSVGGIKQKDS 180
Q K E + + Q D+
Sbjct: 252 ESQEGKFEKRACAKELSQLDT 272
>TAIR|locus:2204518 [details] [associations]
symbol:AT1G14600 "AT1G14600" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC010657 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AJ630486 EMBL:AY568658
IPI:IPI00523105 RefSeq:NP_172912.3 UniGene:At.41962
ProteinModelPortal:Q700D9 SMR:Q700D9 EnsemblPlants:AT1G14600.1
GeneID:838022 KEGG:ath:AT1G14600 TAIR:At1g14600 eggNOG:NOG329381
HOGENOM:HOG000239342 InParanoid:Q700D9 OMA:NIMNMER
Genevestigator:Q700D9 Uniprot:Q700D9
Length = 255
Score = 135 (52.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 38/119 (31%), Positives = 62/119 (52%)
Query: 107 RVVWSIDLHQKFVKAVNQIGFD-KVGPKKILDLMNVPWLTRENVASHLQKYR-LYLTRLQ 164
R+ W+ +LH+ FV AV+ +G K PK +L +M+V LT +V SHLQ YR +T L
Sbjct: 25 RLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSRITLLG 84
Query: 165 KDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNG--GYRFSGSNSVVQNVD 221
K E +S +++ +++ + ++++VH ND G + F S N D
Sbjct: 85 KPEESSSPSSRRRRRQDNEEDH----LHDNLSVHARNDCLLGFHSFNFREQTSATDNDD 139
>TAIR|locus:2045761 [details] [associations]
symbol:AT2G01060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
[GO:0016558 "protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC006837
EMBL:AF370550 EMBL:AY084725 EMBL:BT000013 IPI:IPI00544604
PIR:B84420 RefSeq:NP_178216.1 UniGene:At.24449
ProteinModelPortal:Q9SJW0 SMR:Q9SJW0 EnsemblPlants:AT2G01060.1
GeneID:814630 KEGG:ath:AT2G01060 TAIR:At2g01060 eggNOG:NOG329415
InParanoid:Q9SJW0 OMA:TNELHER PhylomeDB:Q9SJW0
ProtClustDB:CLSN2683513 ArrayExpress:Q9SJW0 Genevestigator:Q9SJW0
Uniprot:Q9SJW0
Length = 286
Score = 136 (52.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 99 DASSTKKARVVWSIDLHQKFVKAVNQIGF-DKVGPKKILDLMNVPWLTRENVASHLQKYR 157
++S K R+ W+ +LH++FV AV Q+G D+ PK +L +M V LT +V SHLQKYR
Sbjct: 9 NSSHASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYR 68
Query: 158 L--YLTRLQKDELKT 170
L YL + KT
Sbjct: 69 LAKYLPDSSSEGKKT 83
>TAIR|locus:2041145 [details] [associations]
symbol:AT2G02060 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000239342 EMBL:BT008556 EMBL:BT008699
EMBL:AK229511 IPI:IPI00542007 RefSeq:NP_565281.2 UniGene:At.41520
ProteinModelPortal:Q7X887 SMR:Q7X887 EnsemblPlants:AT2G02060.1
GeneID:814737 KEGG:ath:AT2G02060 TAIR:At2g02060 eggNOG:NOG268656
InParanoid:Q7X887 OMA:WREQEHE ProtClustDB:CLSN2681500
Genevestigator:Q7X887 Uniprot:Q7X887
Length = 256
Score = 133 (51.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 38/107 (35%), Positives = 62/107 (57%)
Query: 107 RVVWSIDLHQKFVKAVNQIGFD-KVGPKKILDLMNVPWLTRENVASHLQKYR--LYLTRL 163
R+ W+ DLH+ FV AV +G + PK +L +M+V LT +V SHLQ YR LT L
Sbjct: 31 RLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLTISHVKSHLQMYRGGSKLT-L 89
Query: 164 QKDELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRF 210
+K E ++S I+++ +DS + + +++++H ND G + F
Sbjct: 90 EKPE-ESSSSSIRRR----QDSEEDYYLHDNLSLHTRNDCLLGFHSF 131
>TAIR|locus:2038957 [details] [associations]
symbol:AT2G20400 "AT2G20400" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006119
EMBL:AK118313 IPI:IPI00521384 RefSeq:NP_179630.2 UniGene:At.43867
ProteinModelPortal:Q8GXC2 SMR:Q8GXC2 PaxDb:Q8GXC2 PRIDE:Q8GXC2
EnsemblPlants:AT2G20400.1 GeneID:816559 KEGG:ath:AT2G20400
TAIR:At2g20400 eggNOG:NOG265443 HOGENOM:HOG000064669
InParanoid:Q8GXC2 OMA:ANSMENR PhylomeDB:Q8GXC2
ProtClustDB:CLSN2918042 Genevestigator:Q8GXC2 Uniprot:Q8GXC2
Length = 397
Score = 135 (52.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 85 RKDAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIG-FDKVGPKKILDLMNVPW 143
R + N +++ + +A++ K R+ W+ +LH+ FV AVNQ+G ++ PK +L M V
Sbjct: 211 RTVSSNSNNNSNSNNAAAAAKGRMRWTPELHEVFVDAVNQLGGSNEATPKGVLKHMKVEG 270
Query: 144 LTRENVASHLQKYR 157
LT +V SHLQKYR
Sbjct: 271 LTIFHVKSHLQKYR 284
>TAIR|locus:2139865 [details] [associations]
symbol:PHR1 "phosphate starvation response 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016036 "cellular response to phosphate starvation"
evidence=IMP] [GO:0055063 "sulfate ion homeostasis" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=IEP] [GO:0071486 "cellular
response to high light intensity" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0016036 HSSP:O49397
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0071486
HOGENOM:HOG000064669 EMBL:AY081290 EMBL:BT002187 EMBL:AJ310799
IPI:IPI00520685 RefSeq:NP_194590.2 UniGene:At.4525
ProteinModelPortal:Q94CL7 SMR:Q94CL7 PaxDb:Q94CL7 PRIDE:Q94CL7
EnsemblPlants:AT4G28610.1 GeneID:828979 KEGG:ath:AT4G28610
TAIR:At4g28610 eggNOG:NOG275307 InParanoid:Q94CL7 OMA:EKQCKSG
PhylomeDB:Q94CL7 ProtClustDB:CLSN2915055 Genevestigator:Q94CL7
GO:GO:0055063 Uniprot:Q94CL7
Length = 409
Score = 135 (52.6 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 101 SSTKKARVVWSIDLHQKFVKAVNQIG-FDKVGPKKILDLMNVPWLTRENVASHLQKYRLY 159
+ T KAR+ W+ +LH+ FV+AVN +G ++ PK +L +M V LT +V SHLQKYR
Sbjct: 221 NGTGKARMRWTPELHEAFVEAVNSLGGSERATPKGVLKIMKVEGLTIYHVKSHLQKYRTA 280
Query: 160 LTRLQKDE 167
R + E
Sbjct: 281 RYRPEPSE 288
>TAIR|locus:2205339 [details] [associations]
symbol:HRS1 "HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY
ROOT SHORTENING 1" species:3702 "Arabidopsis thaliana" [GO:0005634
"nucleus" evidence=ISM] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0016036 "cellular response to
phosphate starvation" evidence=IMP] [GO:0080022 "primary root
development" evidence=IMP] [GO:0000041 "transition metal ion
transport" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC011810
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0080022 GO:GO:0016036 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237574 EMBL:AF367336 EMBL:AY124865
IPI:IPI00529437 PIR:F86267 RefSeq:NP_563926.1 UniGene:At.20366
ProteinModelPortal:Q9FX67 SMR:Q9FX67 STRING:Q9FX67
EnsemblPlants:AT1G13300.1 GeneID:837890 KEGG:ath:AT1G13300
TAIR:At1g13300 eggNOG:NOG274505 InParanoid:Q9FX67 OMA:TRDESMR
PhylomeDB:Q9FX67 ProtClustDB:CLSN2687791 Genevestigator:Q9FX67
Uniprot:Q9FX67
Length = 344
Score = 133 (51.9 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 99 DASSTKKARVVWSIDLHQKFVKAVNQIGFDKVG-PKKILDLMNVPWLTRENVASHLQKYR 157
D +K R WS LH++F+ A+ +G V PK+I + M V LT + V SHLQKYR
Sbjct: 175 DGGGGRKQRRCWSSQLHRRFLNALQHLGGPHVATPKQIREFMKVDGLTNDEVKSHLQKYR 234
Query: 158 LYLTR 162
L+ R
Sbjct: 235 LHTRR 239
>TAIR|locus:2087740 [details] [associations]
symbol:AT3G12730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 HOGENOM:HOG000239390
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AY070764
EMBL:AY143916 IPI:IPI00519091 RefSeq:NP_187879.2 UniGene:At.28330
ProteinModelPortal:Q8VYI2 SMR:Q8VYI2 EnsemblPlants:AT3G12730.1
GeneID:820455 KEGG:ath:AT3G12730 TAIR:At3g12730 eggNOG:NOG317938
InParanoid:Q8VYI2 OMA:CETQEAS PhylomeDB:Q8VYI2
ProtClustDB:CLSN2917937 Genevestigator:Q8VYI2 Uniprot:Q8VYI2
Length = 235
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 89 ENRHDDRDCGDASSTK-KARVVWSIDLHQKFVKAVNQIGF-DKVGPKKILDLMNVPWLTR 146
E DD G +T K R+ W+ +LH++FV AV +G +K PK I+ +M V LT
Sbjct: 6 EEIRDDSSSGLVLTTDPKPRLRWTTELHERFVDAVTHLGGPEKATPKTIMRVMGVKGLTL 65
Query: 147 ENVASHLQKYRL 158
++ SHLQK+RL
Sbjct: 66 YHLKSHLQKFRL 77
>TAIR|locus:2093726 [details] [associations]
symbol:AT3G24120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] [GO:0010048 "vernalization
response" evidence=RCA] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
EMBL:CP002686 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR025756
InterPro:IPR017930 InterPro:IPR006447 Pfam:PF14379
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00531757
RefSeq:NP_974356.1 UniGene:At.26588 ProteinModelPortal:F4J5D9
SMR:F4J5D9 EnsemblPlants:AT3G24120.2 GeneID:821998
KEGG:ath:AT3G24120 OMA:NLPGDAC PhylomeDB:F4J5D9 Uniprot:F4J5D9
Length = 298
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/73 (42%), Positives = 43/73 (58%)
Query: 87 DAENRHDDRDCGDASSTKKARVVWSIDLHQKFVKAVNQIGF-DKVGPKKILDLMNVPWLT 145
D N D C ++ K R+ W+ +LH++FV AV Q+G DK PK I+ M V LT
Sbjct: 24 DGTNLPGDA-CLVLTTDPKPRLRWTTELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLT 82
Query: 146 RENVASHLQKYRL 158
++ SHLQK+RL
Sbjct: 83 LYHLKSHLQKFRL 95
>TAIR|locus:2206415 [details] [associations]
symbol:APL "ALTERED PHLOEM DEVELOPMENT" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010088 "phloem development"
evidence=IMP] [GO:0010089 "xylem development" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010089 EMBL:AC007202 EMBL:AY045662 EMBL:AY143841
EMBL:AK316719 IPI:IPI00538563 IPI:IPI00542908 PIR:D96825
RefSeq:NP_565209.1 RefSeq:NP_849905.1 UniGene:At.23550 HSSP:O49397
ProteinModelPortal:Q9SAK5 SMR:Q9SAK5 IntAct:Q9SAK5 STRING:Q9SAK5
PRIDE:Q9SAK5 EnsemblPlants:AT1G79430.2 GeneID:844281
KEGG:ath:AT1G79430 TAIR:At1g79430 eggNOG:NOG261203
HOGENOM:HOG000239390 InParanoid:Q94AW3 OMA:CQTLAGE PhylomeDB:Q9SAK5
ProtClustDB:CLSN2689327 Genevestigator:Q9SAK5 GO:GO:0010088
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 Uniprot:Q9SAK5
Length = 358
Score = 132 (51.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 96 DCGDASSTK-KARVVWSIDLHQKFVKAVNQIGF-DKVGPKKILDLMNVPWLTRENVASHL 153
D G +T K R+ W+++LH++FV AV Q+G DK PK I+ +M V LT ++ SHL
Sbjct: 24 DSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHL 83
Query: 154 QKYRL 158
QK+RL
Sbjct: 84 QKFRL 88
Score = 39 (18.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 199 HHNDVSNGGYRFSGSNSVVQNV 220
HH ++ N F+G+N+ N+
Sbjct: 233 HHQNIEN---HFTGNNAADTNI 251
>TAIR|locus:2010297 [details] [associations]
symbol:AT1G49560 "AT1G49560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002684
GO:GO:0003677 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC011807 EMBL:AK221631
IPI:IPI00546952 PIR:B96532 RefSeq:NP_564549.1 UniGene:At.38204
ProteinModelPortal:Q9FX84 SMR:Q9FX84 EnsemblPlants:AT1G49560.1
GeneID:841380 KEGG:ath:AT1G49560 TAIR:At1g49560 InParanoid:Q9FX84
OMA:SSMEDVE PhylomeDB:Q9FX84 ProtClustDB:CLSN2917204
Genevestigator:Q9FX84 Uniprot:Q9FX84
Length = 333
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 42/132 (31%), Positives = 70/132 (53%)
Query: 104 KKARVVWSIDLHQKFVKAVNQIGFDKVG-PKKILDLMNVPWLTRENVASHLQKYRLYLTR 162
+K R W+ +LH++FV A+ Q+G V PK+I + M LT + V SHLQKYRL++ +
Sbjct: 191 RKQRRCWNPELHRRFVDALQQLGGPGVATPKQIREHMQEEGLTNDEVKSHLQKYRLHIRK 250
Query: 163 LQKDELKTS--VGGIKQKDSPSKDSAASF-GIQNSITVHHHNDVSNGGYRF------SGS 213
+ K S V G +S ++D + G ++ + +D G + +G
Sbjct: 251 PNSNAEKQSAVVLGFNLWNSSAQDEEETCEGGESLKRSNAQSDSPQGPLQLPSTTTTTGG 310
Query: 214 NSVVQNV-DAKS 224
+S +++V DAKS
Sbjct: 311 DSSMEDVEDAKS 322
>TAIR|locus:2171427 [details] [associations]
symbol:KAN "KANADI" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0009956 "radial pattern formation" evidence=IMP] [GO:0010051
"xylem and phloem pattern formation" evidence=IMP] [GO:0010158
"abaxial cell fate specification" evidence=IMP] [GO:0048440 "carpel
development" evidence=IGI] [GO:0048481 "ovule development"
evidence=IGI] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IGI] [GO:0009943 "adaxial/abaxial
axis specification" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
EMBL:AB005242 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 PROSITE:PS51293
GO:GO:0010051 GO:GO:0048481 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010158 GO:GO:0009944
GO:GO:0009956 EMBL:AY030192 EMBL:AY037864 EMBL:AY048688
EMBL:BT026436 IPI:IPI00535955 RefSeq:NP_568334.1 UniGene:At.6466
UniGene:At.66763 ProteinModelPortal:Q93WJ9 SMR:Q93WJ9 IntAct:Q93WJ9
STRING:Q93WJ9 PRIDE:Q93WJ9 EnsemblPlants:AT5G16560.1 GeneID:831518
KEGG:ath:AT5G16560 TAIR:At5g16560 eggNOG:NOG330873
HOGENOM:HOG000241649 InParanoid:Q93WJ9 OMA:GINGNEV PhylomeDB:Q93WJ9
ProtClustDB:CLSN2917650 Genevestigator:Q93WJ9 Uniprot:Q93WJ9
Length = 403
Score = 130 (50.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 36/118 (30%), Positives = 57/118 (48%)
Query: 102 STKKARVVWSIDLHQKFVKAVNQIG-FDKVGPKKILDLMNVPWLTRENVASHLQKYRLYL 160
S + R+ W+ LH +FV AV +G ++ PK +L+LM+V LT +V SHLQ YR
Sbjct: 216 SMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 275
Query: 161 TRLQKDELKTSVG----GIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSN 214
T + G GI + + S + ++H D+S+ R+S S+
Sbjct: 276 TTNKPAASSDGSGEEEMGINGNEVHHQSSTDQRAQSDDTSLHQETDISSTQPRWSNSS 333
>TAIR|locus:2119425 [details] [associations]
symbol:UNE16 "unfertilized embryo sac 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009567 "double fertilization forming a
zygote and endosperm" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 EMBL:CP002687 GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR025756 InterPro:IPR017930 InterPro:IPR006447
Pfam:PF14379 TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009567
IPI:IPI00657591 RefSeq:NP_001031626.1 UniGene:At.22199
ProteinModelPortal:F4JTR5 SMR:F4JTR5 PRIDE:F4JTR5
EnsemblPlants:AT4G13640.2 GeneID:826998 KEGG:ath:AT4G13640
OMA:LPIDACL PhylomeDB:F4JTR5 Uniprot:F4JTR5
Length = 295
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 97 CGDASSTKKARVVWSIDLHQKFVKAVNQIGF-DKVGPKKILDLMNVPWLTRENVASHLQK 155
C ++ K R+ W+ +LH++FV AV Q+G DK PK I+ M V LT ++ SHLQK
Sbjct: 29 CLVLTTDPKPRLRWTSELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQK 88
Query: 156 YRL 158
+RL
Sbjct: 89 FRL 91
>TAIR|locus:2051572 [details] [associations]
symbol:AT2G06020 "AT2G06020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 EMBL:AC006413 IPI:IPI00525998 PIR:C84474
RefSeq:NP_178659.1 UniGene:At.52657 ProteinModelPortal:Q9ZPZ8
SMR:Q9ZPZ8 EnsemblPlants:AT2G06020.1 GeneID:815156
KEGG:ath:AT2G06020 TAIR:At2g06020 eggNOG:NOG275517
HOGENOM:HOG000154034 OMA:SKITPCI PhylomeDB:Q9ZPZ8
ProtClustDB:CLSN2912993 ArrayExpress:Q9ZPZ8 Genevestigator:Q9ZPZ8
Uniprot:Q9ZPZ8
Length = 301
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 101 SSTKKARVVWSIDLHQKFVKAVNQIGF-DKVGPKKILDLMNVPWLTRENVASHLQKYRL 158
+S +KAR+ WS DLH FV AV ++G +K PK + + M V + +V SHLQK+RL
Sbjct: 82 TSDEKARLRWSSDLHDCFVNAVEKLGGPNKATPKSVKEAMEVEGIALHHVKSHLQKFRL 140
>TAIR|locus:2063141 [details] [associations]
symbol:AT2G40260 "AT2G40260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC007020
HOGENOM:HOG000090767 IPI:IPI00530168 PIR:C84827 RefSeq:NP_181555.1
UniGene:At.53083 ProteinModelPortal:Q9SIZ5 SMR:Q9SIZ5 PRIDE:Q9SIZ5
EnsemblPlants:AT2G40260.1 GeneID:818618 KEGG:ath:AT2G40260
TAIR:At2g40260 eggNOG:NOG267620 InParanoid:Q9SIZ5 OMA:FRINSHE
PhylomeDB:Q9SIZ5 ProtClustDB:CLSN2913060 ArrayExpress:Q9SIZ5
Genevestigator:Q9SIZ5 Uniprot:Q9SIZ5
Length = 410
Score = 127 (49.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 41/117 (35%), Positives = 60/117 (51%)
Query: 42 KIHEVRDIENIEGFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDAS 101
K E +D E+ E E RSG DQS P + S D +N+ + +
Sbjct: 24 KNEEDKDEEDDEEGEEDEEERSG-DQS---PSSNSYEEESGSHHHD-QNKKNGGSVRPYN 78
Query: 102 STKKARVVWSIDLHQKFVKAVNQIGF-DKVGPKKILDLMNVPWLTRENVASHLQKYR 157
+K R+ W+ +LH F++AV ++G D+ PK +L LMNV L+ +V SHLQ YR
Sbjct: 79 RSKTPRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHLQMYR 135
>TAIR|locus:2041539 [details] [associations]
symbol:AT2G42660 "AT2G42660" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC006931 HSSP:O49397
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AC007087 EMBL:AY074640 EMBL:AY078938
IPI:IPI00542274 PIR:F84856 RefSeq:NP_181794.1 UniGene:At.37023
ProteinModelPortal:Q9SJJ0 SMR:Q9SJJ0 PaxDb:Q9SJJ0 PRIDE:Q9SJJ0
EnsemblPlants:AT2G42660.1 GeneID:818866 KEGG:ath:AT2G42660
TAIR:At2g42660 eggNOG:NOG258430 HOGENOM:HOG000153491 OMA:NREETVE
PhylomeDB:Q9SJJ0 ProtClustDB:CLSN2913320 ArrayExpress:Q9SJJ0
Genevestigator:Q9SJJ0 Uniprot:Q9SJJ0
Length = 255
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 34/100 (34%), Positives = 53/100 (53%)
Query: 67 QSVDGPLLTGEDLT---SVRKRKDAENRHDDRD--CGDASS---TKKARVVWSIDLHQKF 118
+S G T DL +V K + E+ +D D + + R+ W+ DLH F
Sbjct: 4 RSSPGKCSTWLDLNREETVEKNNEEESSVEDEDQITNNVRQYIRSNMPRLRWTPDLHLSF 63
Query: 119 VKAVNQIGF-DKVGPKKILDLMNVPWLTRENVASHLQKYR 157
V+AV ++G D+ PK +L++MN+ L+ +V SHLQ YR
Sbjct: 64 VRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQMYR 103
>TAIR|locus:2163852 [details] [associations]
symbol:ATS "AT5G42630" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048481 "ovule development" evidence=IMP] [GO:0080060
"integument development" evidence=IGI;IMP] [GO:0005618 "cell wall"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005618 GO:GO:0030154 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0044212
PROSITE:PS51293 HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0080060 HOGENOM:HOG000241649 EMBL:AB013391
EMBL:AY048691 EMBL:BT026053 IPI:IPI00541325 IPI:IPI00892123
RefSeq:NP_001119363.1 RefSeq:NP_199077.1 UniGene:At.26412
ProteinModelPortal:Q9FJV5 SMR:Q9FJV5 STRING:Q9FJV5
EnsemblPlants:AT5G42630.1 GeneID:834270 KEGG:ath:AT5G42630
TAIR:At5g42630 eggNOG:NOG280455 InParanoid:Q9FJV5 OMA:PQIYGRD
PhylomeDB:Q9FJV5 ProtClustDB:CLSN2916355 Genevestigator:Q9FJV5
Uniprot:Q9FJV5
Length = 276
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 38/105 (36%), Positives = 50/105 (47%)
Query: 54 GFESIHMTRSGSDQSVDGPLLTGEDLTSVRKRKDAENRHDDRDCGDASSTKKARVVWSID 113
GF+ H RS Q P + G D KR + G S + R+ W+
Sbjct: 68 GFDHHHQRRSNMFQ----PQIYGRDF----KRSSSSM------VGLKRSIRAPRMRWTST 113
Query: 114 LHQKFVKAVNQIG-FDKVGPKKILDLMNVPWLTRENVASHLQKYR 157
LH FV AV +G ++ PK +L+LMNV LT +V SHLQ YR
Sbjct: 114 LHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYR 158
>TAIR|locus:505006489 [details] [associations]
symbol:KAN3 "AT4G17695" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 GO:GO:0007275
GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
HSSP:O49397 InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:Z97344 HOGENOM:HOG000241649 EMBL:AY048690 IPI:IPI00544036
RefSeq:NP_567535.1 UniGene:At.26411 ProteinModelPortal:Q941I2
SMR:Q941I2 PaxDb:Q941I2 PRIDE:Q941I2 EnsemblPlants:AT4G17695.1
GeneID:827490 KEGG:ath:AT4G17695 TAIR:At4g17695 eggNOG:NOG253351
InParanoid:Q941I2 OMA:SSNENEW PhylomeDB:Q941I2
ProtClustDB:CLSN2917571 Genevestigator:Q941I2 Uniprot:Q941I2
Length = 322
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 39/125 (31%), Positives = 58/125 (46%)
Query: 107 RVVWSIDLHQKFVKAVNQIG-FDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLTRLQK 165
R+ W+ LH FV AV +G ++ PK +L+LM+V LT +V SHLQ YR ++
Sbjct: 166 RMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRT----IKS 221
Query: 166 DELKTSVGGIKQKDSPSKDSAASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQNVDAKSL 225
E T+ G Q D + S ++T +N S ++ S VD S
Sbjct: 222 TEKPTTSSG--QSDCENGSQVNSEREARNLTGLWNNSSSEARFQLKAKAS--SGVDISSN 277
Query: 226 EGDVK 230
E + K
Sbjct: 278 ENEWK 282
>TAIR|locus:2028346 [details] [associations]
symbol:KAN2 "AT1G32240" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048440 "carpel development" evidence=IGI] [GO:0048481 "ovule
development" evidence=IGI] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=IGI] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 PROSITE:PS51293
GO:GO:0048481 EMBL:AC084110 HSSP:O49397 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0009944
HOGENOM:HOG000241649 EMBL:AY048689 EMBL:BT029211 EMBL:AB493491
IPI:IPI00539948 RefSeq:NP_564392.1 UniGene:At.25340
ProteinModelPortal:Q9C616 SMR:Q9C616 STRING:Q9C616
EnsemblPlants:AT1G32240.1 GeneID:840116 KEGG:ath:AT1G32240
TAIR:At1g32240 eggNOG:NOG325874 InParanoid:Q9C616 OMA:SDVYENG
PhylomeDB:Q9C616 ProtClustDB:CLSN2715231 Genevestigator:Q9C616
Uniprot:Q9C616
Length = 388
Score = 117 (46.2 bits), Expect = 0.00067, P = 0.00067
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 102 STKKARVVWSIDLHQKFVKAVNQIG-FDKVGPKKILDLMNVPWLTRENVASHLQKYRLYL 160
S + R+ W+ LH +FV AV +G ++ PK +L+LM+V LT +V SHLQ YR
Sbjct: 210 SMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 269
Query: 161 T 161
T
Sbjct: 270 T 270
>TAIR|locus:2042927 [details] [associations]
symbol:AT2G38300 "AT2G38300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 HSSP:O49397 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT004973
EMBL:AK117689 IPI:IPI00540370 RefSeq:NP_181364.2 UniGene:At.46670
ProteinModelPortal:Q8GYE4 SMR:Q8GYE4 IntAct:Q8GYE4 STRING:Q8GYE4
PRIDE:Q8GYE4 EnsemblPlants:AT2G38300.1 GeneID:818410
KEGG:ath:AT2G38300 TAIR:At2g38300 eggNOG:NOG310127
HOGENOM:HOG000090767 InParanoid:Q8GYE4 OMA:KDEEDRT PhylomeDB:Q8GYE4
ProtClustDB:CLSN2918908 Genevestigator:Q8GYE4 Uniprot:Q8GYE4
Length = 340
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 39/135 (28%), Positives = 65/135 (48%)
Query: 103 TKKARVVWSIDLHQKFVKAVNQIGF-DKVGPKKILDLMNVPWLTRENVASHLQKYRLYLT 161
+K R+ W+ DLH +FV+AV ++G ++ PK + +MN+ L+ +V SHLQ YR
Sbjct: 52 SKVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQMYR---- 107
Query: 162 RLQKDELKTSVGGIKQKDSPSKD-SAASFGIQNSITVHHHNDVSNGGYRFSGSNSVVQNV 220
+ D+ ++ G K S D + ++HN S Y SN+ + N
Sbjct: 108 SKKIDDQGQAIAGHKHLFETSTDRNIYKLSQLPMFRGYNHNHDSPFRYGSKISNASLWNS 167
Query: 221 DAKSLEGDVKGIDTI 235
++ E + ID I
Sbjct: 168 SSQGTERSL--IDQI 180
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 489 489 0.00082 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 616 (65 KB)
Total size of DFA: 314 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 44.91u 0.09s 45.00t Elapsed: 00:00:19
Total cpu time: 44.91u 0.09s 45.00t Elapsed: 00:00:21
Start: Thu May 9 22:01:37 2013 End: Thu May 9 22:01:58 2013