Query 011274
Match_columns 489
No_of_seqs 88 out of 90
Neff 3.0
Searched_HMMs 29240
Date Mon Mar 25 04:45:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011274.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011274hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rlo_A Centaurin-gamma 1; spli 94.3 0.28 9.5E-06 40.5 9.5 40 441-480 87-126 (128)
2 1mai_A Phospholipase C delta-1 93.9 0.26 8.8E-06 42.1 8.6 107 366-480 9-123 (131)
3 4h8s_A DCC-interacting protein 92.0 0.51 1.7E-05 46.6 8.8 93 370-477 301-397 (407)
4 2dkp_A Pleckstrin homology dom 91.9 1.1 3.6E-05 36.1 9.2 95 370-477 21-118 (128)
5 2dn6_A KIAA0640 protein; PH do 91.8 1.9 6.6E-05 33.8 10.5 95 372-482 10-107 (115)
6 2cod_A Centaurin-delta 1; ARF 91.8 1.2 4.2E-05 35.4 9.5 86 372-477 10-98 (115)
7 3aj4_A Pleckstrin homology dom 91.7 1.6 5.6E-05 34.4 9.9 99 372-477 7-110 (112)
8 1wg7_A Dedicator of cytokinesi 91.5 0.67 2.3E-05 38.7 7.9 98 370-481 18-127 (150)
9 2d9y_A Pleckstrin homology dom 90.7 2 6.8E-05 33.9 9.5 94 371-477 12-108 (117)
10 2q13_A DCC-interacting protein 90.5 0.6 2.1E-05 45.7 7.7 94 370-477 278-374 (385)
11 1x1g_A Pleckstrin 2; PH domain 90.5 1.5 5E-05 35.4 8.8 101 371-477 19-123 (129)
12 2d9v_A Pleckstrin homology dom 90.0 3.7 0.00013 34.0 11.0 98 372-477 10-113 (130)
13 1u5d_A SKAP55, SRC kinase-asso 89.9 2.2 7.6E-05 32.7 9.0 95 372-478 5-105 (108)
14 2lul_A Tyrosine-protein kinase 89.9 2.8 9.5E-05 36.6 10.7 97 373-479 18-122 (164)
15 1fao_A Dual adaptor of phospho 89.7 2.8 9.6E-05 33.7 9.8 92 371-479 19-113 (126)
16 2dhk_A TBC1 domain family memb 88.9 2.7 9.4E-05 34.0 9.2 89 373-477 11-103 (119)
17 2i5f_A Pleckstrin; PH domain, 88.7 3.9 0.00013 31.8 9.7 96 372-476 9-107 (109)
18 1u5f_A SRC-associated adaptor 88.6 2.5 8.4E-05 35.4 9.0 96 371-478 18-119 (148)
19 1wgq_A FYVE, rhogef and PH dom 88.0 2.7 9.3E-05 33.1 8.5 34 443-476 68-101 (109)
20 3p6a_A RHO guanine nucleotide 87.7 2.1 7.3E-05 41.0 9.1 38 441-478 332-371 (377)
21 2yry_A Pleckstrin homology dom 87.4 2.6 8.9E-05 33.5 8.1 94 371-477 23-119 (122)
22 1eaz_A Tandem PH domain contai 87.3 2.1 7.2E-05 34.1 7.5 37 442-479 76-112 (125)
23 1v5u_A SBF1, SET binding facto 87.2 4.1 0.00014 32.0 9.0 97 372-477 10-110 (117)
24 2d9x_A Oxysterol binding prote 87.1 3.6 0.00012 33.2 8.8 98 372-482 10-108 (120)
25 1upq_A PEPP1; PH domain, phosp 86.6 4.8 0.00016 32.0 9.2 96 371-479 12-110 (123)
26 1pls_A Pleckstrin homology dom 86.1 6.5 0.00022 30.9 9.7 39 441-479 64-102 (113)
27 2lg1_A A-kinase anchor protein 85.2 3.2 0.00011 37.6 8.4 39 441-479 133-173 (185)
28 2da0_A 130-kDa phosphatidylino 84.9 6.4 0.00022 31.5 9.3 92 372-480 12-103 (114)
29 3mpx_A FYVE, rhogef and PH dom 84.5 2.9 9.8E-05 41.0 8.3 94 372-480 246-339 (434)
30 2cof_A Protein KIAA1914; PH do 83.9 3.5 0.00012 32.6 7.2 36 441-476 64-99 (107)
31 1x05_A Pleckstrin; PH domain, 83.9 6.6 0.00022 31.6 8.9 98 372-478 20-120 (129)
32 1wjm_A Beta-spectrin III; PH d 83.8 5.8 0.0002 32.0 8.6 38 441-478 80-117 (123)
33 2rsg_A Collagen type IV alpha- 83.8 6.3 0.00021 30.2 8.4 34 441-475 58-91 (94)
34 1btn_A Beta-spectrin; signal t 82.5 8.6 0.00029 29.6 8.8 34 442-475 72-105 (106)
35 3odw_A RHO guanine nucleotide 81.2 7 0.00024 40.5 10.1 39 441-479 485-525 (536)
36 2j59_M RHO-GTPase activating p 80.8 6.5 0.00022 33.5 8.2 35 442-477 76-110 (168)
37 1x1f_A Signal-transducing adap 78.9 19 0.00063 31.6 10.7 35 443-478 79-113 (149)
38 1btk_A Bruton'S tyrosine kinas 78.8 19 0.00065 31.7 10.8 106 372-478 5-132 (169)
39 1u5e_A SRC-associated adaptor 78.7 6.3 0.00021 36.1 7.9 96 371-478 107-208 (211)
40 1fgy_A GRP1; PH domain, signal 75.4 27 0.00093 27.5 9.9 25 454-478 96-120 (127)
41 3t06_A PDZ-rhogef, RHO guanine 75.3 14 0.00049 36.0 9.8 40 441-480 368-410 (418)
42 1v5p_A Pleckstrin homology dom 74.9 17 0.00059 30.5 9.0 95 373-478 18-120 (126)
43 1v89_A Hypothetical protein KI 74.4 28 0.00096 27.0 10.2 93 372-478 10-112 (118)
44 3rcp_A Pleckstrin homology dom 73.9 3.7 0.00013 31.9 4.3 35 442-476 57-91 (103)
45 3tfm_A Myosin X; split PH doma 72.3 4.4 0.00015 37.2 5.1 36 442-478 120-155 (228)
46 4a6h_A Phosphatidylinositol 4, 72.3 23 0.0008 29.8 9.2 99 372-478 8-118 (120)
47 1zc3_B Exocyst complex protein 72.1 43 0.0015 28.1 10.9 97 368-477 7-106 (113)
48 2zkm_X 1-phosphatidylinositol- 70.9 17 0.00059 39.9 10.1 104 366-478 13-135 (799)
49 1dro_A Beta-spectrin; cytoskel 70.8 6.2 0.00021 32.1 5.2 38 441-478 82-119 (122)
50 2p0d_A RHO GTPase-activating p 70.6 18 0.00062 30.1 8.1 38 441-478 87-124 (129)
51 1dbh_A Protein (human SOS 1); 70.0 14 0.00046 35.3 8.1 35 443-477 314-348 (354)
52 3cxb_B Pleckstrin homology dom 68.9 38 0.0013 27.3 9.5 37 441-477 64-100 (112)
53 3ohm_B 1-phosphatidylinositol- 66.9 13 0.00045 41.7 8.2 102 366-478 17-139 (885)
54 1kz7_A Guanine nucleotide exch 65.0 64 0.0022 31.0 11.7 88 386-480 236-327 (353)
55 1txd_A RHO guanine nucleotide 61.5 46 0.0016 32.1 10.0 40 442-481 331-372 (385)
56 3lju_X ARF-GAP with dual PH do 61.0 23 0.00079 35.3 8.1 99 372-478 271-372 (386)
57 1unq_A RAC-alpha serine/threon 60.8 44 0.0015 26.6 8.4 40 442-481 71-113 (125)
58 3a8p_A T-lymphoma invasion and 59.2 54 0.0018 31.0 9.9 40 441-480 87-126 (263)
59 3qwm_A Iqsec1, IQ motif and SE 58.4 24 0.00083 31.6 6.9 94 377-481 26-125 (140)
60 3pp2_A RHO GTPase-activating p 55.0 14 0.00047 30.6 4.5 37 441-477 86-122 (124)
61 1w1g_A HPDK1, 3-phosphoinositi 54.3 58 0.002 29.6 8.7 34 444-479 107-140 (151)
62 2k8e_A UPF0339 protein YEGP; p 54.1 15 0.00053 32.4 4.8 93 377-480 23-117 (130)
63 1xcg_A PDZ-rhogef, RHO guanine 54.0 60 0.0021 30.9 9.4 37 442-478 327-366 (368)
64 3qr0_A Phospholipase C-beta (P 52.3 17 0.00059 40.3 5.9 109 365-478 17-142 (816)
65 2y7b_A Actin-binding protein a 51.4 83 0.0028 25.2 8.5 25 455-479 105-129 (134)
66 2w2x_D 1-phosphatidylinositol- 48.8 34 0.0012 28.1 5.9 38 443-480 82-121 (124)
67 1qqg_A IRS-1, insulin receptor 44.9 40 0.0014 32.0 6.5 38 441-479 76-113 (264)
68 3ksy_A SOS-1, SON of sevenless 44.8 44 0.0015 37.6 7.8 103 366-479 441-547 (1049)
69 2vrw_B P95VAV, VAV1, proto-onc 43.7 1.6E+02 0.0054 28.6 10.7 37 444-480 300-337 (406)
70 1nty_A Triple functional domai 43.1 1.2E+02 0.0041 28.4 9.4 37 443-479 269-309 (311)
71 2k49_A UPF0339 protein SO_3888 43.0 20 0.00068 31.3 3.7 93 377-480 7-101 (118)
72 2r09_A Cytohesin-3; autoinhibi 41.8 1.6E+02 0.0054 28.7 10.3 24 454-477 304-327 (347)
73 2rgn_B RHOA/RAC/CDC42 exchange 41.1 50 0.0017 31.8 6.6 37 443-479 279-319 (354)
74 1v88_A Oxysterol binding prote 41.0 37 0.0013 28.7 5.0 23 456-478 102-124 (130)
75 2lxb_A Small glutamine-rich te 40.6 18 0.00063 29.6 2.9 34 259-294 37-71 (74)
76 2pz1_A RHO guanine nucleotide 37.4 2.5E+02 0.0087 27.8 11.2 37 443-479 404-441 (466)
77 4asv_A Small glutamine-rich te 33.2 20 0.00068 30.6 2.1 34 259-294 49-83 (92)
78 1v61_A RAC/CDC42 guanine nucle 31.5 45 0.0015 29.2 4.2 101 368-480 27-128 (132)
79 2dfk_A Collybistin II; DH doma 30.1 3.1E+02 0.011 26.8 10.3 35 444-478 328-363 (402)
80 2z0q_A XPLN, RHO guanine nucle 29.2 2.9E+02 0.0098 26.1 9.6 34 444-477 309-345 (346)
81 2coc_A FYVE, rhogef and PH dom 26.7 82 0.0028 26.1 4.8 35 441-476 70-104 (112)
82 3ky9_A Proto-oncogene VAV; cal 26.7 2.9E+02 0.01 28.5 9.9 38 444-481 472-510 (587)
83 3tfm_A Myosin X; split PH doma 26.6 36 0.0012 31.1 2.8 33 442-475 194-226 (228)
84 3a98_B Engulfment and cell mot 26.4 50 0.0017 30.8 3.8 36 443-478 115-150 (203)
85 2rov_A RHO-associated protein 25.6 2.9E+02 0.0098 22.9 8.7 96 374-476 5-113 (117)
86 2dtc_A RAL guanine nucleotide 22.7 89 0.0031 27.1 4.4 35 441-475 74-109 (126)
87 2y39_A Nickel and cobalt resis 20.9 71 0.0024 28.2 3.4 41 190-230 31-76 (118)
88 3tca_A Amyloid beta A4 precurs 20.5 2.5E+02 0.0086 25.4 7.2 34 441-474 234-272 (291)
No 1
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=94.32 E-value=0.28 Score=40.50 Aligned_cols=40 Identities=23% Similarity=0.296 Sum_probs=34.3
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~~ 480 (489)
+...+|-|.|.+.....|.|+|..+.+.|++.|+..+..+
T Consensus 87 ~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~~ 126 (128)
T 2rlo_A 87 EENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILAS 126 (128)
T ss_dssp CCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 4567899999875689999999999999999999877543
No 2
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=93.86 E-value=0.26 Score=42.10 Aligned_cols=107 Identities=14% Similarity=0.220 Sum_probs=63.7
Q ss_pred hHHHHhhccceeeeccCCceeeEEEEEEEcCccEEEEEeeccc-----cccccc-cccccEEEeecc-CCCCCCCccccc
Q 011274 366 SRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRH-----VAGTIT-KKKKNVVLEVIP-DMPAWPGRHLLE 438 (489)
Q Consensus 366 s~e~larG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSkH-----v~Gaft-KKKK~VV~~V~~-d~paWpgr~~~e 438 (489)
....|.+|+.|+|-++++.- |.--+++..+++++-. .|+- -.+.|. ..-+.|..|-.. +.-.++ +
T Consensus 9 ~l~~L~~Gt~l~K~~~~~~~--k~r~f~l~~~~~~~w~-~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~-----~ 80 (131)
T 1mai_A 9 DLQALLKGSQLLKVKSSSWR--RERFYKLQEDCKTIWQ-ESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFA-----R 80 (131)
T ss_dssp HHHHHHHCEEEEEESSSSCE--EEEEEEECTTSSEEEE-CCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHC-----T
T ss_pred HHHHHHcCCeEEEECCCCcc--eeEEEEECCCCCEEEe-CCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhh-----h
Confidence 45789999999999888743 4445567777888754 2211 011111 111334444311 110011 1
Q ss_pred CCCcceeeeeeecc-cceEEEEeCCcchhhhHHHHHHHHHHHH
Q 011274 439 GGEDRRYFGLKTVL-RGVVEFECRSQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 439 ~~e~r~YFglkTa~-~GvvEFeC~sq~~~q~W~~gI~~LL~~~ 480 (489)
.-.+.++|=|--.. ...+-|-|.|..+.+.|++|+..|+...
T Consensus 81 ~~~~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~ 123 (131)
T 1mai_A 81 DIPEDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHS 123 (131)
T ss_dssp TSCGGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC--
T ss_pred cCCccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 11355778665444 3589999999999999999999999543
No 3
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=91.96 E-value=0.51 Score=46.56 Aligned_cols=93 Identities=13% Similarity=0.225 Sum_probs=58.9
Q ss_pred HhhccceeeeccCCce--eeEEEEEEEcCccEEEEEeeccc-cccccccccccEEEeeccCCCCCCCcccccCCCcceee
Q 011274 370 LARGCELLKRTRKGDL--HWKIVSVYINRLNQVMLKMKSRH-VAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYF 446 (489)
Q Consensus 370 larG~eLlkrTrkG~l--hwk~VSVyink~~qV~LKmKSkH-v~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YF 446 (489)
..|.|=|+|++..|.. -|+.-=+++. +|+...--+... -.|.+. =..|.|.- .+..+.+.+|
T Consensus 301 ~~k~G~L~k~~~~g~~~~~W~rrwfvl~-~~~l~y~~~~~~~~~~~~~-l~~~~v~~-------------~~~~~r~~cF 365 (407)
T 4h8s_A 301 IQKAGYLNLRNKTGLVTTTWERLYFFTQ-GGNLMCQPRGAVAGGLIQD-LDNCSVMA-------------VDCEDRRYCF 365 (407)
T ss_dssp SCCEEEEEEEEECSSSCEEEEEEEEEEC-SSCEECCCTTCSSCCCCBC-SSCCEEEE-------------ECCTTCSSEE
T ss_pred ceeeceeeeeccCCCCCCCceEEEEEEE-CCEEEEEeCCCCCCCeEEE-CCceEEEE-------------CCCCCCCceE
Confidence 5688999999998864 4888877775 354432211111 111111 11222211 1122455689
Q ss_pred eeeeccc-ceEEEEeCCcchhhhHHHHHHHHH
Q 011274 447 GLKTVLR-GVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 447 glkTa~~-GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
-|.|.++ +++.|.++|+.+.+.|.+.|++..
T Consensus 366 ~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~ 397 (407)
T 4h8s_A 366 QITTPNGKSGIILQAESRKENEEWICAINNIS 397 (407)
T ss_dssp EEECTTSSCCEEEECSSSHHHHHHHHHHHHHH
T ss_pred EEEecCCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 9999863 579999999999999999998765
No 4
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=91.89 E-value=1.1 Score=36.09 Aligned_cols=95 Identities=13% Similarity=0.164 Sum_probs=57.5
Q ss_pred HhhccceeeeccCCceeeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcceee
Q 011274 370 LARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYF 446 (489)
Q Consensus 370 larG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YF 446 (489)
+-+.|-|+|+..++.-.||.--+.+.. +.+.. -|++ ..-|.|.-. .+.|..+..+ +.......|
T Consensus 21 ~~~~G~L~K~~~~~~~~Wk~R~fvL~~-~~L~y-y~~~~~~~~~g~i~L~-~~~v~~~~~~----------~~~~~~~~F 87 (128)
T 2dkp_A 21 VVRRGWLYKQDSTGMKLWKKRWFVLSD-LCLFY-YRDEKEEGILGSILLP-SFQIALLTSE----------DHINRKYAF 87 (128)
T ss_dssp CCEEEEEEEECCSSSCCEEEEEEEEET-TEEEE-ESSTTCCSEEEEECGG-GSEEEECCGG----------GCCSSCSEE
T ss_pred cEEEEEEEEeCCCCCCCceeEEEEEeC-CEEEE-ECCCCCcccceEEEcC-ceEEEEcCCc----------ccCCCCeEE
Confidence 346688889887666678887776642 32222 2222 222333321 2222222111 111345689
Q ss_pred eeeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 447 GLKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 447 glkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
-|.|.+.+.+.|.|++..+.+.|++.|+.-.
T Consensus 88 ~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 118 (128)
T 2dkp_A 88 KAAHPNMRTYYFCTDTGKEMELWMKAMLDAA 118 (128)
T ss_dssp EEECSSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 9998866789999999999999999997643
No 5
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.84 E-value=1.9 Score=33.83 Aligned_cols=95 Identities=12% Similarity=0.161 Sum_probs=58.4
Q ss_pred hccceeeeccCCceeeEEEEEEEcCccEEEEEeec---cccccccccccccEEEeeccCCCCCCCcccccCCCcceeeee
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKS---RHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGL 448 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKS---kHv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFgl 448 (489)
+.|-|.|+.. ..-.||.--+.+..+ .+ .=-++ ...-|.|.-..-+.|..+.+. ......|-|
T Consensus 10 ~~G~L~K~~~-~~~~Wk~R~fvL~~~-~L-~yy~~~~~~~~~g~i~L~~~~~v~~~~~~------------~~~~~~F~i 74 (115)
T 2dn6_A 10 KQGYMMKKGH-RRKNWTERWFVLKPN-II-SYYVSEDLKDKKGDILLDENCCVESLPDK------------DGKKCLFLV 74 (115)
T ss_dssp EEEEEEEECT-TSSCEEEEEEEECSS-CE-EEESSTTCSSEEEEECCCTTCEEEEECCC------------TTCCSEEEE
T ss_pred EEEEEEecCC-CCCCcEEeEEEEECC-EE-EEeCCCCCcccCcEEEecCcEEEEECCCC------------CCCeeEEEE
Confidence 4577888764 334587776666542 21 11122 223344444433333332111 124478999
Q ss_pred eecccceEEEEeCCcchhhhHHHHHHHHHHHHHh
Q 011274 449 KTVLRGVVEFECRSQREYDIWTQGVARLLNVAAE 482 (489)
Q Consensus 449 kTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~~~~ 482 (489)
.|.. +.+.|.|++..+.+.|++.|+..+....+
T Consensus 75 ~~~~-r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~ 107 (115)
T 2dn6_A 75 KCFD-KTFEISASDKKKKQEWIQAIHSTIHLLKL 107 (115)
T ss_dssp ECSS-CEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCC-CEEEEEcCCHHHHHHHHHHHHHHHHHHhc
Confidence 8886 78999999999999999999998865543
No 6
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=91.82 E-value=1.2 Score=35.38 Aligned_cols=86 Identities=15% Similarity=0.125 Sum_probs=54.6
Q ss_pred hccceeeeccCCceeeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcceeeee
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGL 448 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFgl 448 (489)
+.|-|.|+.+++.-.||.--+.+.. +. +.=-|++ ..-|.|.-..-..|.. .+...|-|
T Consensus 10 ~~G~L~K~~~~~~~~WkkR~fvL~~-~~-L~yy~~~~~~~~~g~i~l~~~~~v~~-----------------~~~~~F~i 70 (115)
T 2cod_A 10 KSGWLDKLSPQGKRMFQKRWVKFDG-LS-ISYYNNEKEMYSKGIIPLSAISTVRV-----------------QGDNKFEV 70 (115)
T ss_dssp EEEEEEECCSSSSSCCEEEEEEECS-SE-EEEEESSCCSSCCCEEETTTEEEEEE-----------------ETTTEEEE
T ss_pred EEEEEEEcCCCCCCCCceEEEEEEC-CE-EEEEcCCCCcccCCEEECCcceEEEe-----------------CCCCEEEE
Confidence 4578888887666678887777753 32 2222222 1222222221111111 11468999
Q ss_pred eecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 449 KTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 449 kTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
.|.. +.+.|.|++..+.+.|++.|+..+
T Consensus 71 ~~~~-r~~~l~a~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 71 VTTQ-RTFVFRVEKEEERNDWISILLNAL 98 (115)
T ss_dssp EESS-CCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EeCC-cEEEEECCCHHHHHHHHHHHHHHH
Confidence 8876 789999999999999999999876
No 7
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=91.65 E-value=1.6 Score=34.42 Aligned_cols=99 Identities=8% Similarity=0.082 Sum_probs=57.0
Q ss_pred hccceeeeccCCceeeEEEEEEEcCccEEEEEeec---cccccccccccccEEEeeccCCCC--CCCcccccCCCcceee
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKS---RHVAGTITKKKKNVVLEVIPDMPA--WPGRHLLEGGEDRRYF 446 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKS---kHv~GaftKKKK~VV~~V~~d~pa--Wpgr~~~e~~e~r~YF 446 (489)
+.|-|.|+.. +.-.||.--+.+.+.+++..= |+ ....|.|.-...+|-+.-..++-. +| +.......|
T Consensus 7 ~~G~L~K~g~-~~k~WkkR~fvL~~~~~L~yy-k~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~-----~~~~~~~~F 79 (112)
T 3aj4_A 7 KSGWLLRQST-ILKRWKKNWFDLWSDGHLIYY-DDQTRQNIEDKVHMPMDCINIRTGQECRDTQPP-----DGKSKDCML 79 (112)
T ss_dssp EEEEEEEECS-SSCCEEEEEEEECTTSEEEEE-SSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCS-----TTCCGGGEE
T ss_pred EEEEEEeeCC-CCCCeeceEEEEeeCCEEEEE-cCCCCCCCCccccccccceeecccccccccCCC-----CCCCcCcEE
Confidence 4467777754 334688877777444443322 22 222344433333333221111111 11 111235689
Q ss_pred eeeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 447 GLKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 447 glkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
-|.|.+.++..|.|+|..+.+.|++.|+...
T Consensus 80 ~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 80 QIVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp EEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 9998756899999999999999999998643
No 8
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=91.47 E-value=0.67 Score=38.75 Aligned_cols=98 Identities=15% Similarity=0.117 Sum_probs=60.7
Q ss_pred HhhccceeeeccCCc-----eeeEEEEEEEcCc--cE-EEEEeeccc----cccccccccccEEEeeccCCCCCCCcccc
Q 011274 370 LARGCELLKRTRKGD-----LHWKIVSVYINRL--NQ-VMLKMKSRH----VAGTITKKKKNVVLEVIPDMPAWPGRHLL 437 (489)
Q Consensus 370 larG~eLlkrTrkG~-----lhwk~VSVyink~--~q-V~LKmKSkH----v~GaftKKKK~VV~~V~~d~paWpgr~~~ 437 (489)
+-+.|-|+|+.++|. -.||.--+.+... |. .++=-|++. .-|.|.-.. |.|..+ .
T Consensus 18 ~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~-~~~~~~-~----------- 84 (150)
T 1wg7_A 18 ITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDS-CMGVVQ-N----------- 84 (150)
T ss_dssp CCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTT-CCEECC-C-----------
T ss_pred eeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEeccc-CEEEec-C-----------
Confidence 346688999987642 3577776666542 21 333333332 233333222 111111 0
Q ss_pred cCCCcceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHHHHH
Q 011274 438 EGGEDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVAA 481 (489)
Q Consensus 438 e~~e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~~~ 481 (489)
.......|-|.|.+.+.+.|.|++..+.+.|++.|+..+....
T Consensus 85 -~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~~ 127 (150)
T 1wg7_A 85 -NKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLNF 127 (150)
T ss_dssp -CSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhhh
Confidence 1135578999998757999999999999999999999886443
No 9
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.72 E-value=2 Score=33.85 Aligned_cols=94 Identities=17% Similarity=0.231 Sum_probs=56.6
Q ss_pred hhccceeeeccCCceeeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcceeee
Q 011274 371 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 447 (489)
Q Consensus 371 arG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFg 447 (489)
-+.|-|+|+.+++.-.||.--+.+.. +.+.. -|+. ..-|.|.-.. +.|..|..+ +.......|-
T Consensus 12 ~~~G~L~K~~~~~~~~Wk~R~fvL~~-~~L~y-y~~~~~~~~~g~i~L~~-~~v~~~~~~----------~~~~~~~~F~ 78 (117)
T 2d9y_A 12 TKAGWLFKQASSGVKQWNKRWFVLVD-RCLFY-YKDEKEESILGSIPLLS-FRVAAVQPS----------DNISRKHTFK 78 (117)
T ss_dssp CEEEEEEEECTTSSSCEEEEEEEEET-TEEEE-ESSTTCCSCCEEEECSS-CEEEECCTT----------TTCCCSSEEE
T ss_pred eEEEEEEEeCCCCCCCceEEEEEECC-CEEEE-ECCCCCCCcCCEEEeCC-eEEEEcCcc----------ccCCCccEEE
Confidence 35678889886666788888777742 33222 2222 2223222221 112222111 1123456898
Q ss_pred eeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 448 LKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 448 lkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
|.+...+.+.|.|++..+.+.|++.|+..+
T Consensus 79 i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 108 (117)
T 2d9y_A 79 AEHAGVRTYFFSAESPEEQEAWIQAMGEAA 108 (117)
T ss_dssp EECSSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred EEcCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 877666899999999999999999998654
No 10
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=90.55 E-value=0.6 Score=45.69 Aligned_cols=94 Identities=10% Similarity=0.173 Sum_probs=56.0
Q ss_pred HhhccceeeeccCCcee--eEEEEEEEcCccEEEEEeeccccccccccccccEEEeeccCCCCCCCcccccCCCcceeee
Q 011274 370 LARGCELLKRTRKGDLH--WKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 447 (489)
Q Consensus 370 larG~eLlkrTrkG~lh--wk~VSVyink~~qV~LKmKSkHv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFg 447 (489)
.-+.|-|+|++..|..+ ||.-=+++. .++.+.. |+.. +....++++..+.- ...+..+.+.+|-
T Consensus 278 ~~k~G~L~K~~~~~~~~~~WkkRwfvL~-~~~L~y~-k~~~-------~~~~~~i~l~~~~v-----~~~~~~~r~~~F~ 343 (385)
T 2q13_A 278 TRKAGYLNARNKTGLVSSTWDRQFYFTQ-GGNLMSQ-ARGD-------VAGGLAMDIDNCSV-----MAVDCEDRRYCFQ 343 (385)
T ss_dssp SCCEEEEEEC--------CCEEEEEEEE-TTEEEEE-CSSC-------SSCEEEEECTTCEE-----EEECCTTCSSEEE
T ss_pred ccEEEEEEEecCCCCCcCCceeEEEEEE-CCEEEEe-cCCC-------cCCCceEEccceEE-----EeccccCCCceEE
Confidence 34678999998887555 999888775 4554321 1111 11123444433210 0111224567899
Q ss_pred eeeccc-ceEEEEeCCcchhhhHHHHHHHHH
Q 011274 448 LKTVLR-GVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 448 lkTa~~-GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
|.|.++ +...|.|+|..+.+.|++.|+..+
T Consensus 344 i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~ 374 (385)
T 2q13_A 344 ITSFDGKKSSILQAESKKDHEEWICTINNIS 374 (385)
T ss_dssp EECTTSCBCCCEECSSHHHHHHHHHHHHHHH
T ss_pred EEeCCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 999873 589999999999999999998765
No 11
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=90.54 E-value=1.5 Score=35.45 Aligned_cols=101 Identities=15% Similarity=0.233 Sum_probs=58.6
Q ss_pred hhccceeeeccCCceeeEEEEEEEcCccEEEEEeecc----ccccccccccccEEEeeccCCCCCCCcccccCCCcceee
Q 011274 371 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR----HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYF 446 (489)
Q Consensus 371 arG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSk----Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YF 446 (489)
-+.|-|+|+... .-.||.--+.+..++..+.=-++. ..-|.|.-.. |.|..|.+. ..|.. ..+......|
T Consensus 19 ~~~G~L~K~g~~-~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~-~~v~~~~~~--~~p~~--~~~~~~~~~F 92 (129)
T 1x1g_A 19 VKQGYLAKQGHK-RKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRG-SLVSALEDN--GVPTG--VKGNVQGNLF 92 (129)
T ss_dssp EEEEEEEEECSS-SSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTT-CCCEECCSS--SSCSS--CSSCCCSSCE
T ss_pred EEEEEEEEECCC-CCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcC-CEEEEeCCC--CCccc--ccCCCCCceE
Confidence 456788888654 456877777775433333333332 2233333222 223333221 01110 0011145789
Q ss_pred eeeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 447 GLKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 447 glkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
-|.|.+++++.|.|++..+.+.|++.|+..+
T Consensus 93 ~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 123 (129)
T 1x1g_A 93 KVITKDDTHYYIQASSKAERAEWIEAIKKLT 123 (129)
T ss_dssp EECCTTCCCEEECCSSHHHHHHHHHHHHHHS
T ss_pred EEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 9999886689999999999999999998754
No 12
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=90.02 E-value=3.7 Score=33.97 Aligned_cols=98 Identities=11% Similarity=0.078 Sum_probs=55.9
Q ss_pred hccceeeeccCCceeeEEEEEEEcCccEEEEEeeccc---cccccccccccEEEee---ccCCCCCCCcccccCCCccee
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRH---VAGTITKKKKNVVLEV---IPDMPAWPGRHLLEGGEDRRY 445 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSkH---v~GaftKKKK~VV~~V---~~d~paWpgr~~~e~~e~r~Y 445 (489)
+.|-|+|+.. ..-.||.-=+.+.+++.+.-- |++. ..|.|--...++-+.+ |.++. +| +.......
T Consensus 10 ~~G~L~K~g~-~~k~WkkRwFVL~~~~~L~Yy-k~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~-~~-----~~~~~~~~ 81 (130)
T 2d9v_A 10 RGGWLWRQSS-ILRRWKRNWFALWLDGTLGYY-HDETAQDEEDRVVIHFNVRDIKVGQECQDVQ-PP-----EGRSRDGL 81 (130)
T ss_dssp EEEEEEEECS-SSCCEEEEEEEEETTTEEEEE-SSSSTTSEEEEEECTTTEEEEEEGGGCSSCC-CC-----SSCCTTTE
T ss_pred EEEEEEeecC-ccCCceeeEEEEccCCEEEEE-eCCCCCCcCceEecccceeEEeccccccccC-CC-----CCCCcCcE
Confidence 5578888864 334788877777444543322 2221 1222211111111111 22322 11 11234578
Q ss_pred eeeeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 446 FGLKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 446 FglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
|-|.|.+.++..|.|++..+.+.|++.|+...
T Consensus 82 F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~ 113 (130)
T 2d9v_A 82 LTVNLREGSRLHLCAETRDDAIAWKTALMEAN 113 (130)
T ss_dssp EEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 99999665689999999999999999998754
No 13
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=89.94 E-value=2.2 Score=32.75 Aligned_cols=95 Identities=21% Similarity=0.275 Sum_probs=56.9
Q ss_pred hccceeeeccCCc---eeeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCccee
Q 011274 372 RGCELLKRTRKGD---LHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRY 445 (489)
Q Consensus 372 rG~eLlkrTrkG~---lhwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~Y 445 (489)
+.|-|.|+.+++. -.||.--+.+.. +.+ .=-++. ..-|.|.-.. +.|.. ..+ ..+.......
T Consensus 5 ~~G~L~K~~~~~~~~~~~Wk~R~fvL~~-~~L-~yy~~~~~~~~~g~i~L~~-~~v~~-~~~--------~~~~~~~~~~ 72 (108)
T 1u5d_A 5 KQGYLEKKSKDHSFFGSEWQKRWCVVSR-GLF-YYYANEKSKQPKGTFLIKG-YSVRM-APH--------LRRDSKKESC 72 (108)
T ss_dssp EEEEEEEEEECSSSSCEEEEEEEEEEET-TEE-EEESSTTCSSCSEEEECTT-CEEEE-CGG--------GCSSGGGGGE
T ss_pred EEEEEEEcCCCCCccccCceeeEEEEeC-CEE-EEecCCCCCCCCEEEEecc-eEEEe-CCc--------cccccCCcce
Confidence 4577888886542 578887777743 322 222222 1223322211 11111 111 0112235678
Q ss_pred eeeeecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 446 FGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 446 FglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
|-|.|.+.+.+.|.|+|..+.+.|++.|+..+.
T Consensus 73 F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~ 105 (108)
T 1u5d_A 73 FELTSQDRRTYEFTATSPAEARDWVDQISFLLK 105 (108)
T ss_dssp EEEECSSSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 999998767899999999999999999998774
No 14
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=89.92 E-value=2.8 Score=36.62 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=59.9
Q ss_pred ccceeeeccC----CceeeEEEEEEEcCccEEEEEeecc----ccccccccccccEEEeeccCCCCCCCcccccCCCcce
Q 011274 373 GCELLKRTRK----GDLHWKIVSVYINRLNQVMLKMKSR----HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRR 444 (489)
Q Consensus 373 G~eLlkrTrk----G~lhwk~VSVyink~~qV~LKmKSk----Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~ 444 (489)
.|-|+||... +.-.||.==+.+.. +. +.==|++ ..-|.|.-..-.+|..|..+... ...+...
T Consensus 18 EG~L~Kr~~~kk~~~~knWKkRwFVL~~-~~-L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~-------~~~~~~~ 88 (164)
T 2lul_A 18 EEILIKRSQQKKKTSPLNYKERLFVLTK-SM-LTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGV-------IPCQNKY 88 (164)
T ss_dssp EEEEEEECCCCSSSCCCCEEEEEEEEES-SE-EEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSS-------CCSSSCS
T ss_pred EEEEEEecCCCCCCCCCCceeEEEEEEC-CE-EEEEeccCcccccccEEEEeeeEEEEeccccccC-------cccccce
Confidence 4788998753 23358887666643 32 2222222 23345544443444444433211 0113456
Q ss_pred eeeeeecccceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 445 YFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 445 YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
.|-|.|.+ ++.-|.++|..+.+.|++.|+..+..
T Consensus 89 ~f~i~t~~-rt~~l~A~s~~e~~~Wi~aL~~~i~~ 122 (164)
T 2lul_A 89 PFQVVHDA-NTLYIFAPSPQSRDLWVKKLKEEIKN 122 (164)
T ss_dssp EEEEECSS-CEEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred eEEEecCC-cEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 78899887 79999999999999999999988754
No 15
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=89.73 E-value=2.8 Score=33.72 Aligned_cols=92 Identities=16% Similarity=0.105 Sum_probs=54.8
Q ss_pred hhccceeeeccCCceeeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcceeee
Q 011274 371 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 447 (489)
Q Consensus 371 arG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFg 447 (489)
-+.|-|+|+.. ..-.||.--+.+.. +. +.=-+++ ..-|.|.-..-.+|.. . +.......|-
T Consensus 19 ~~~G~L~K~g~-~~~~Wk~R~fvL~~-~~-L~yy~~~~~~~~~g~i~L~~~~~v~~-~------------~~~~~~~~F~ 82 (126)
T 1fao_A 19 TKEGYLTKQGG-LVKTWKTRWFTLHR-NE-LKYFKDQMSPEPIRILDLTECSAVQF-D------------YSQERVNCFC 82 (126)
T ss_dssp CEEEEEEEECS-SSCCEEEEEEEEET-TE-EEEESSTTCSSCSEEEEGGGCCEEEE-E------------CSSSSSSEEE
T ss_pred cEEEEEEEcCC-CCCCcccEEEEEEC-CE-EEEeCCCCCCCceeEEEccceEEEEe-c------------ccCCCCCEEE
Confidence 35578888763 33458777666643 22 2212222 2223333222222221 1 1113457899
Q ss_pred eeecccceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 448 LKTVLRGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 448 lkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
|.|.. +.+.|.|++..+.+.|++.|+..+..
T Consensus 83 i~~~~-r~~~l~a~s~~e~~~Wi~al~~~i~~ 113 (126)
T 1fao_A 83 LVFPF-RTFYLCAKTGVEADEWIKILRWKLSQ 113 (126)
T ss_dssp EEETT-EEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEeCC-cEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 99876 79999999999999999999987743
No 16
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.87 E-value=2.7 Score=34.05 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=56.4
Q ss_pred ccceeeeccCCce-eeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcceeeee
Q 011274 373 GCELLKRTRKGDL-HWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGL 448 (489)
Q Consensus 373 G~eLlkrTrkG~l-hwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFgl 448 (489)
-|-|.|+..+|.+ .||.-=+.+..++..+.=-|++ ..-|.|.-..-.+|.+ + ......|-|
T Consensus 11 ~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~---~------------~~~~~~F~i 75 (119)
T 2dhk_A 11 CGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCK---A------------DAEEGIFEI 75 (119)
T ss_dssp EEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEEC---T------------TGGGCEEEE
T ss_pred EEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCCcccccEEECCCCEEEec---C------------CCCCCEEEE
Confidence 3778888776544 5777666665433233323332 2334444433333331 0 123468999
Q ss_pred eecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 449 KTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 449 kTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
.|.. ++..|.|++..+.+.|++.|+...
T Consensus 76 ~~~~-r~~~l~a~s~~e~~~Wi~al~~~~ 103 (119)
T 2dhk_A 76 KTPS-RVITLKAATKQAMLYWLQQLQMKR 103 (119)
T ss_dssp ECSS-CCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EeCC-cEEEEECCCHHHHHHHHHHHHHHH
Confidence 9986 799999999999999999998765
No 17
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=88.72 E-value=3.9 Score=31.75 Aligned_cols=96 Identities=16% Similarity=0.225 Sum_probs=56.1
Q ss_pred hccceeeeccCCceeeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcceeeee
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGL 448 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFgl 448 (489)
+.|-|.|+... .-.||.--+.+..++-.+.=-|+. ..-|.|.-.. +.|..|..+ |... .......|-|
T Consensus 9 ~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~-~~v~~~~~~----~~~~---~~~~~~~F~i 79 (109)
T 2i5f_A 9 KQGCLLKQGHR-RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRG-CVVTSVESN----SNGR---KSEEENLFEI 79 (109)
T ss_dssp EEEEEEEECTT-TCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTT-CEEEEECC---------------CCSEEEE
T ss_pred EEEEEEEcCCC-CCCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCC-CEEEEccCC----cccc---cCCCceEEEE
Confidence 44677776542 234877766665432123322332 2334444333 445555433 1110 0125578999
Q ss_pred eecccceEEEEeCCcchhhhHHHHHHHH
Q 011274 449 KTVLRGVVEFECRSQREYDIWTQGVARL 476 (489)
Q Consensus 449 kTa~~GvvEFeC~sq~~~q~W~~gI~~L 476 (489)
.|..+..+.|.|++..+.+.|++.|+..
T Consensus 80 ~~~~~~~~~l~a~s~~e~~~Wi~ai~~~ 107 (109)
T 2i5f_A 80 ITADEVHYFLQAATPKERTEWIKAIQMA 107 (109)
T ss_dssp ECTTCCEEEEECSSHHHHHHHHHHHHHH
T ss_pred EeCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 9987667999999999999999999864
No 18
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=88.57 E-value=2.5 Score=35.41 Aligned_cols=96 Identities=16% Similarity=0.260 Sum_probs=58.4
Q ss_pred hhccceeeeccCCc---eeeEEEEEEEcCccEEEEEeeccc---cccccccccccEEEeeccCCCCCCCcccccCCCcce
Q 011274 371 ARGCELLKRTRKGD---LHWKIVSVYINRLNQVMLKMKSRH---VAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRR 444 (489)
Q Consensus 371 arG~eLlkrTrkG~---lhwk~VSVyink~~qV~LKmKSkH---v~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~ 444 (489)
-+.|-|+|+.+++. -.||.--+.+.. +.+ .=-|+.. ..|.|.-..-.|+. ..+ ..+......
T Consensus 18 ~~~G~L~K~g~~~~~~~k~WkkR~fvL~~-~~L-~yyk~~~~~~~~g~i~L~~~~v~~--~~~--------~~~~~~~~~ 85 (148)
T 1u5f_A 18 IKAGYLEKRRKDHSFLGFEWQKRWCALSK-TVF-YYYGSDKDKQQKGEFAIDGYDVRM--NNT--------LRKDGKKDC 85 (148)
T ss_dssp EEEEEEEEECCCSSCSSCSEEEEEEEEET-TEE-EEESSTTCSSCSEEEECTTCEEEE--CTT--------SCSSTTGGG
T ss_pred cEEEEEEEeCCCCCCcCCCceeEEEEEEC-CEE-EEEcCCCCcccceEEEcCCcEEEE--CCC--------cccCCCCcc
Confidence 35688999876542 468777666642 322 2223332 23444332222221 111 111223457
Q ss_pred eeeeeecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 445 YFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 445 YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
.|-|.|...+.+.|.|++..+.+.|++.|+..+.
T Consensus 86 ~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 86 CFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp EEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 8999998757899999999999999999998763
No 19
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=88.02 E-value=2.7 Score=33.05 Aligned_cols=34 Identities=12% Similarity=0.120 Sum_probs=29.8
Q ss_pred ceeeeeeecccceEEEEeCCcchhhhHHHHHHHH
Q 011274 443 RRYFGLKTVLRGVVEFECRSQREYDIWTQGVARL 476 (489)
Q Consensus 443 r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~L 476 (489)
...|-|.|..+.++.|.|++..+.+.|++.|+..
T Consensus 68 ~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a 101 (109)
T 1wgq_A 68 SKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEG 101 (109)
T ss_dssp SSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHH
Confidence 4789999887667999999999999999998864
No 20
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=87.71 E-value=2.1 Score=41.03 Aligned_cols=38 Identities=13% Similarity=0.233 Sum_probs=29.4
Q ss_pred Ccceeeeeeec--ccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 441 EDRRYFGLKTV--LRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 441 e~r~YFglkTa--~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
+.+..|.+.+. ....++|-|.+..+++.|.+.|+..+.
T Consensus 332 ~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~ 371 (377)
T 3p6a_A 332 DHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAG 371 (377)
T ss_dssp CTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHH
Confidence 45566777653 234689999999999999999998763
No 21
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.36 E-value=2.6 Score=33.50 Aligned_cols=94 Identities=17% Similarity=0.221 Sum_probs=55.9
Q ss_pred hhccceeeeccCCceeeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcceeee
Q 011274 371 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 447 (489)
Q Consensus 371 arG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFg 447 (489)
-+.|-|+|+..++.-.||.--+.+.. +.+.. -|+. ..-|.|.-..- .|..|.. .+.......|-
T Consensus 23 ~~~G~L~K~~~~~~~~Wk~R~fvL~~-~~L~y-y~~~~~~~~~g~i~L~~~-~v~~~~~----------~~~~~~~~~F~ 89 (122)
T 2yry_A 23 TKAGWLFKQASSGVKQWNKRWFVLVD-RCLFY-YKDEKEESILGSIPLLSF-RVAAVQP----------SDNISRKHTFK 89 (122)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEEET-TEEEE-ESSTTCCSCCEEEESTTC-CCEECCT----------TCSCSSSSEEE
T ss_pred cEEEEEEEECCCCCCCcEEEEEEEeC-CEEEE-ECCCCCCCcccEEEcCCC-EEEEcCc----------cccCCcccEEE
Confidence 45688989876666678888777742 33222 2222 11222221111 1111111 01123456898
Q ss_pred eeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 448 LKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 448 lkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
|.|...+.+.|.|++..+.+.|++.|+...
T Consensus 90 i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 90 AEHAGVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp EECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EecCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 887766899999999999999999998754
No 22
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=87.28 E-value=2.1 Score=34.09 Aligned_cols=37 Identities=16% Similarity=0.261 Sum_probs=32.6
Q ss_pred cceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 442 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 442 ~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
....|-|.|.+ +.+.|.|++..+.+.|++.|+..+..
T Consensus 76 ~~~~F~i~~~~-r~~~l~a~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 76 RDNLFEIVTTS-RTFYVQADSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp CSSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEeCC-cEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 46789999886 79999999999999999999987754
No 23
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=87.16 E-value=4.1 Score=32.02 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=55.8
Q ss_pred hccceeeeccCCceeeEEEEEEEcC-ccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcceeee
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINR-LNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 447 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink-~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFg 447 (489)
+.|-|+|+... .-.||.--+.+.. .+++.. -+++ ..-|.|.-..-.+|. +..+....| +.......|-
T Consensus 10 ~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~y-y~~~~~~~~~g~i~L~~~~~v~-~~~~~~~~~-----~~~~~~~~F~ 81 (117)
T 1v5u_A 10 YEGILYKKGAF-MKPWKARWFVLDKTKHQLRY-YDHRMDTECKGVIDLAEVEAVA-PGTPTIGAP-----KTVDEKAFFD 81 (117)
T ss_dssp EEEEEEECCCS-SSCCEEEEEEEETTTTEEEE-ESSSSCSSCCCEEEGGGEEEEE-CCCCCTTSC-----SSSCTTTCEE
T ss_pred EEEEEEecCCC-CCCceeeEEEEECCCCEEEE-eecCCCCccceEEEccCcEEEe-ecCcccccc-----ccCCCCeEEE
Confidence 34677776543 3457777666653 233222 2222 233444433333332 222222222 1124557899
Q ss_pred eeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 448 LKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 448 lkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
|.|.. +.+.|.|++..+.+.|++.|+..+
T Consensus 82 i~~~~-r~~~l~a~s~~e~~~Wi~al~~~i 110 (117)
T 1v5u_A 82 VKTTR-RVYNFCAQDVPSAQQWVDRIQSCL 110 (117)
T ss_dssp EEESS-CEEEEECSSHHHHHHHHHHHHTTC
T ss_pred EECCC-ceEEEECCCHHHHHHHHHHHHHHh
Confidence 98876 799999999999999999997643
No 24
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.08 E-value=3.6 Score=33.21 Aligned_cols=98 Identities=13% Similarity=0.112 Sum_probs=57.8
Q ss_pred hccceeeeccCCceeeEEEEEEEcC-ccEEEEEeeccccccccccccccEEEeeccCCCCCCCcccccCCCcceeeeeee
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINR-LNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKT 450 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink-~~qV~LKmKSkHv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFglkT 450 (489)
+.|-|+|+.. ..-.||.--+.+.. ++++. =-|++.-. -.+-+..|.+.-|. +....++...|-|.|
T Consensus 10 ~~G~L~K~~~-~~~~Wk~R~fvL~~~~~~L~-Yyk~~~~~--~~~~~g~I~L~~~~---------v~~~~~~~~~F~i~~ 76 (120)
T 2d9x_A 10 VYGYLMKYTN-LVTGWQYRFFVLNNEAGLLE-YFVNEQSR--NQKPRGTLQLAGAV---------ISPSDEDSHTFTVNA 76 (120)
T ss_dssp CEEEEEEEEE-TTTEEEEEEEEECTTTCEEE-EESSGGGS--SSCCSEEEECTTCC---------EECCSSSSSCEEECC
T ss_pred EEEEEEecCC-CCCCceEEEEEEECCCCEEE-EEecCccc--CCCccceEEcceEE---------EEecCCCCCEEEEEc
Confidence 4467777763 33468888888864 24332 22322200 00111222221111 111113558899999
Q ss_pred cccceEEEEeCCcchhhhHHHHHHHHHHHHHh
Q 011274 451 VLRGVVEFECRSQREYDIWTQGVARLLNVAAE 482 (489)
Q Consensus 451 a~~GvvEFeC~sq~~~q~W~~gI~~LL~~~~~ 482 (489)
.+.++..|.|++..+.+.|++.|+..+.....
T Consensus 77 ~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 108 (120)
T 2d9x_A 77 ASGEQYKLRATDAKERQHWVSRLQICTQHHTE 108 (120)
T ss_dssp SSSCCEEECCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHHhhh
Confidence 86578999999999999999999987765543
No 25
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=86.62 E-value=4.8 Score=31.99 Aligned_cols=96 Identities=14% Similarity=0.084 Sum_probs=58.0
Q ss_pred hhccceeeeccCCceeeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcceeee
Q 011274 371 ARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFG 447 (489)
Q Consensus 371 arG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFg 447 (489)
-+.|-|+|+..++.-.||.--+.+. .+.+.. -|+. ..-|.|.-.. +.|..+..+ ........|-
T Consensus 12 ~~~G~L~K~~~~~~~~WkkR~fvL~-~~~L~y-y~~~~~~~~~g~i~l~~-~~v~~~~~~----------~~~~~~~~f~ 78 (123)
T 1upq_A 12 HIRGWLHKQDSSGLRLWKRRWFVLS-GHCLFY-YKDSREESVLGSVLLPS-YNIRPDGPG----------APRGRRFTFT 78 (123)
T ss_dssp EEEEEEEEECSSSSCCEEEEEEEEE-TTEEEE-ESSTTCCSCCEEEEGGG-CEEEECCSS----------CTTSSSSEEE
T ss_pred eEEEEEEeeCCCCCCCceeEEEEEe-CCEEEE-ECCCCCcccceEEECCC-CEEEECCCC----------ccCCCcEEEE
Confidence 3568888887666667888777774 233222 2222 2233333211 222211111 0113456788
Q ss_pred eeecccceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 448 LKTVLRGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 448 lkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
|.|.+.+.+.|.|++..+.+.|++.|+.....
T Consensus 79 i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 79 AEHPGMRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp EECTTSCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred EECCCCeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 88876678999999999999999999987644
No 26
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=86.10 E-value=6.5 Score=30.93 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=33.2
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
.....|-|.|.+.+.+.|.|++..+.+.|.+.|+..+..
T Consensus 64 ~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~ 102 (113)
T 1pls_A 64 KRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKC 102 (113)
T ss_dssp CSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 355689999887678999999999999999999987643
No 27
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=85.21 E-value=3.2 Score=37.62 Aligned_cols=39 Identities=23% Similarity=0.395 Sum_probs=30.3
Q ss_pred Ccceeeeeeecc--cceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 441 EDRRYFGLKTVL--RGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 441 e~r~YFglkTa~--~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
+.+..|-+.+.. ....||-|.+..+++.|.+.|+.-...
T Consensus 133 d~~~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~ 173 (185)
T 2lg1_A 133 EEKGLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINT 173 (185)
T ss_dssp CSSEEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 455677776642 247999999999999999999886643
No 28
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.87 E-value=6.4 Score=31.49 Aligned_cols=92 Identities=14% Similarity=0.238 Sum_probs=54.4
Q ss_pred hccceeeeccCCceeeEEEEEEEcCccEEEEEeeccccccccccccccEEEeeccCCCCCCCcccccCCCcceeeeeeec
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTV 451 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSkHv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFglkTa 451 (489)
+.|-|+|+.+...-.||.--+.+. .+.+.. -|++.- +....|.+ .... +....+....|-|.|.
T Consensus 12 ~~G~L~K~~~~~~k~WkkR~fvL~-~~~L~y-yk~~~~-----~~~~~i~l--~~~~-------v~~~~~~~~~F~I~~~ 75 (114)
T 2da0_A 12 KKGYLLKKSDGIRKVWQRRKCSVK-NGILTI-SHATSN-----RQPAKLNL--LTCQ-------VKPNAEDKKSFDLISH 75 (114)
T ss_dssp EEEEEEEECSSSCCCEEEEEEEEE-TTEEEE-CCSSCC-----SCCEEEET--TTSE-------EEECSSSSSCEEEEET
T ss_pred EEEEEEEeCCCCCCCceeEEEEEe-CCEEEE-EcCCCC-----CCCCEEEe--eeeE-------EEECCCCCCEEEEEcC
Confidence 457889988653357887766663 343332 222210 11111111 0000 0001124468999988
Q ss_pred ccceEEEEeCCcchhhhHHHHHHHHHHHH
Q 011274 452 LRGVVEFECRSQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 452 ~~GvvEFeC~sq~~~q~W~~gI~~LL~~~ 480 (489)
. +.+.|.|++..+.+.|++.|+.....+
T Consensus 76 ~-r~~~l~a~s~~e~~~Wi~al~~~~~~~ 103 (114)
T 2da0_A 76 N-RTYHFQAEDEQDYVAWISVLTNSKEEA 103 (114)
T ss_dssp T-EEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred C-cEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 6 799999999999999999999776544
No 29
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=84.47 E-value=2.9 Score=41.04 Aligned_cols=94 Identities=15% Similarity=0.079 Sum_probs=53.4
Q ss_pred hccceeeeccCCceeeEEEEEEEcCccEEEEEeeccccccccccccccEEEeeccCCCCCCCcccccCCCcceeeeeeec
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTV 451 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSkHv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFglkTa 451 (489)
+.|+|.+.++++ ++.+-+|+=.+--|+.|-++. +.|.-|...-+.++.-.. .++++....|-+.+.
T Consensus 246 ~~g~l~~~~~~~---~~~r~~fLF~d~Ll~~k~~~~---~~y~~k~~i~L~~l~v~~--------~~~~~~~~~f~i~~~ 311 (434)
T 3mpx_A 246 KEGTLMKVTGKN---RRPRHLFLMNDVLLYTYPQKD---GKYRLKNTLAVANMKVSR--------PVMEKVPYALKIETS 311 (434)
T ss_dssp ECCEEEEEETTE---EEEEEEEEESSEEEEEEECTT---SCEEEEEEEEC-----CC--------CCCTTSCSEEEEECS
T ss_pred ecceEEEEeCCC---ceEEEEEEECCEEEEEEecCC---CeEEEEEEEEcCCcEEEe--------cCCCCCCeeEEEecC
Confidence 446777766553 566667765566666665432 223222111111111110 112234567778877
Q ss_pred ccceEEEEeCCcchhhhHHHHHHHHHHHH
Q 011274 452 LRGVVEFECRSQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 452 ~~GvvEFeC~sq~~~q~W~~gI~~LL~~~ 480 (489)
+ ..+.|.|.+..+++.|.+.|+..+.-.
T Consensus 312 ~-~~~~l~a~s~~ek~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 312 E-SCLMLSASSCAERDEWYGCLSRALPED 339 (434)
T ss_dssp S-CEEEEECSSHHHHHHHHHHHHHC----
T ss_pred C-eEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 6 689999999999999999999988543
No 30
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=83.93 E-value=3.5 Score=32.63 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=30.7
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARL 476 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~L 476 (489)
.....|-|.|...++..|.|++..+.+.|++.|+..
T Consensus 64 ~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~ 99 (107)
T 2cof_A 64 DHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSE 99 (107)
T ss_dssp TBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHH
Confidence 355789999984578999999999999999998864
No 31
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=83.87 E-value=6.6 Score=31.65 Aligned_cols=98 Identities=15% Similarity=0.217 Sum_probs=57.1
Q ss_pred hccceeeeccCCceeeEEEEEEEcCccEEEEEeec---cccccccccccccEEEeeccCCCCCCCcccccCCCcceeeee
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKS---RHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGL 448 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKS---kHv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFgl 448 (489)
+.|-|+|+... .-.||.--+.+..++-.+.=-|+ ...-|.|.-.. +.|..|..+ |... .......|-|
T Consensus 20 ~~G~L~K~g~~-~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~-~~v~~~~~~----~~~~---~~~~~~~F~i 90 (129)
T 1x05_A 20 KQGCLLKQGHR-RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRG-CVVTSVESN----SNGR---KSEEENLFEI 90 (129)
T ss_dssp EEEEEEECCSS-CCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTT-CEEEECCCC----CCSS---SCSSCSEEEE
T ss_pred EEEEEEecCCC-CCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccC-CEEEEccCC----cccc---ccCCCeEEEE
Confidence 45778886542 23476655555432112222222 22334444333 444444433 1110 1135688999
Q ss_pred eecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 449 KTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 449 kTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
.|..+..+.|.|++..+.+.|++.|+..+.
T Consensus 91 ~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 120 (129)
T 1x05_A 91 ITADEVHYFLQAATPKERTEWIKAIQMASR 120 (129)
T ss_dssp ECTTCCCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred EcCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 998766799999999999999999988664
No 32
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=83.84 E-value=5.8 Score=31.99 Aligned_cols=38 Identities=16% Similarity=0.245 Sum_probs=32.6
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
.....|-|.|.+....-|.|+|..+.+.|++.|+..+.
T Consensus 80 ~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 80 KRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIA 117 (123)
T ss_dssp SCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence 45678999998756899999999999999999987654
No 33
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=83.78 E-value=6.3 Score=30.22 Aligned_cols=34 Identities=12% Similarity=0.209 Sum_probs=29.8
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVAR 475 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~ 475 (489)
++...|-|.|.. ++..|.|+|..+.+.|++.|+.
T Consensus 58 ~~~~~F~i~~~~-r~~~l~A~s~~e~~~Wi~aLq~ 91 (94)
T 2rsg_A 58 FDECRFDISVND-SVWYLRAQDPDHRQQWIDAIEQ 91 (94)
T ss_dssp SCSSEEEEEETT-EEEEEECCSSCCTHHHHHHHHH
T ss_pred ccceeEEEEeCC-eEEEEECCCHHHHHHHHHHHHh
Confidence 455789999887 7999999999999999999874
No 34
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=82.52 E-value=8.6 Score=29.59 Aligned_cols=34 Identities=18% Similarity=0.414 Sum_probs=29.6
Q ss_pred cceeeeeeecccceEEEEeCCcchhhhHHHHHHH
Q 011274 442 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVAR 475 (489)
Q Consensus 442 ~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~ 475 (489)
....|-|.|.+.+.+-|.|+|..+.+.|++.|+.
T Consensus 72 ~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~ 105 (106)
T 1btn_A 72 KKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISS 105 (106)
T ss_dssp SSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHH
T ss_pred CccEEEEEecCCCEEEEECCCHHHHHHHHHHHhc
Confidence 4568999988767899999999999999999863
No 35
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=81.22 E-value=7 Score=40.45 Aligned_cols=39 Identities=13% Similarity=0.219 Sum_probs=30.3
Q ss_pred Ccceeeeeeec--ccceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 441 EDRRYFGLKTV--LRGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 441 e~r~YFglkTa--~~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
+.+..|.+.+. ....++|.|.+..+++.|.+.|+..+..
T Consensus 485 d~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~ 525 (536)
T 3odw_A 485 DHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGS 525 (536)
T ss_dssp CTTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cCCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 46677777652 2247999999999999999999987743
No 36
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=80.76 E-value=6.5 Score=33.52 Aligned_cols=35 Identities=14% Similarity=0.236 Sum_probs=30.8
Q ss_pred cceeeeeeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 442 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 442 ~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
....|-|.|.+ +...|.|++..+.+.|++.|+...
T Consensus 76 ~~~~F~I~t~~-r~~~l~A~s~~e~~~Wi~ai~~~~ 110 (168)
T 2j59_M 76 RKNVFRLTTSD-CECLFQAEDRDDMLAWIKTIQESS 110 (168)
T ss_dssp CSSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEeCC-ceEEEEcCCHHHHHHHHHHHHHHH
Confidence 45789999998 799999999999999999998643
No 37
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=78.95 E-value=19 Score=31.61 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=30.7
Q ss_pred ceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 443 RRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 443 r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
...|-|.|.+ +.+.|.++|..+.+.|++.|+....
T Consensus 79 ~~~F~I~t~~-r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 79 CAKFTLVLPK-EEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp CCEEEEECSS-CCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCC-CEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 4679999987 7899999999999999999987654
No 38
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=78.80 E-value=19 Score=31.68 Aligned_cols=106 Identities=16% Similarity=0.178 Sum_probs=63.3
Q ss_pred hccceeeeccCC----ceeeEEEEEEEcCccEEEEE-----eeccccccccccccccEEEeeccCCCCCCCcc-----cc
Q 011274 372 RGCELLKRTRKG----DLHWKIVSVYINRLNQVMLK-----MKSRHVAGTITKKKKNVVLEVIPDMPAWPGRH-----LL 437 (489)
Q Consensus 372 rG~eLlkrTrkG----~lhwk~VSVyink~~qV~LK-----mKSkHv~GaftKKKK~VV~~V~~d~paWpgr~-----~~ 437 (489)
+.|-|+|+...+ .--||.==+.+....-.--| -+.+..-|.|.-..-.+|..|..+...=+++. -.
T Consensus 5 keG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~ 84 (169)
T 1btk_A 5 LESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEE 84 (169)
T ss_dssp EEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC------
T ss_pred EEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccccCc
Confidence 568899987543 23588887777654222233 13345567777665455555522100000111 00
Q ss_pred cCC-Ccc-------eeeeeeecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 438 EGG-EDR-------RYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 438 e~~-e~r-------~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
+.. ++- ..|-|.|.+ +.+-|.++|..+.+.|++.|+..+.
T Consensus 85 ~~~~~~~~i~~~~~~~F~I~t~~-rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 85 SSEMEQISIIERFPYPFQVVYDE-GPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp ---CCTTHHHHCCCEEEEEEETT-CCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccccccEEEEeCC-ceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 000 110 568899987 6899999999999999999998765
No 39
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=78.69 E-value=6.3 Score=36.06 Aligned_cols=96 Identities=17% Similarity=0.296 Sum_probs=58.4
Q ss_pred hhccceeeeccCC---ceeeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcce
Q 011274 371 ARGCELLKRTRKG---DLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRR 444 (489)
Q Consensus 371 arG~eLlkrTrkG---~lhwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~ 444 (489)
-+-|-|+|+..+. .-.||.--+.+.. + .+.=-|+. ..-|.|.-..-.+|.. .+ .........
T Consensus 107 ~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~-~-~L~Yyk~~~~~~p~g~I~L~~~~~v~~--~~--------~~~~~~k~~ 174 (211)
T 1u5e_A 107 IKAGYLEKRRKDHSFLGFEWQKRWCALSK-T-VFYYYGSDKDKQQKGEFAIDGYDVRMN--NT--------LRKDGKKDC 174 (211)
T ss_dssp EEEEEEEEEEHHHHTTTCCCEEEEEEEET-T-EEEEESSTTCSSCSEEEECTTCEEEEC--GG--------GCSSTTGGG
T ss_pred cEEEEEEEECCCCCcCCCCcEeEEEEEEC-C-EEEEEcCCCCccceEEEEeCCcEEEEc--CC--------ccccCCCCC
Confidence 4668899987652 2368777666632 3 22222332 2234443333333221 11 011223457
Q ss_pred eeeeeecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 445 YFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 445 YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
.|-|.|...+...|.|++..+.+.|++.|+..+.
T Consensus 175 ~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~ 208 (211)
T 1u5e_A 175 CFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQ 208 (211)
T ss_dssp EEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 8999998667999999999999999999988653
No 40
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=75.37 E-value=27 Score=27.50 Aligned_cols=25 Identities=16% Similarity=0.312 Sum_probs=22.1
Q ss_pred ceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 454 GVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 454 GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
+++.|.|++..+.+.|++.|+..+.
T Consensus 96 r~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 96 VVYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHHHHhc
Confidence 5789999999999999999987653
No 41
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=75.26 E-value=14 Score=35.98 Aligned_cols=40 Identities=15% Similarity=0.277 Sum_probs=30.5
Q ss_pred Ccceeeeeeeccc---ceEEEEeCCcchhhhHHHHHHHHHHHH
Q 011274 441 EDRRYFGLKTVLR---GVVEFECRSQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 441 e~r~YFglkTa~~---GvvEFeC~sq~~~q~W~~gI~~LL~~~ 480 (489)
+...+|.+.+... ..++|.|.+..+++.|++.|+..+.-+
T Consensus 368 ~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~ 410 (418)
T 3t06_A 368 DKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA 410 (418)
T ss_dssp CSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred cCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence 4556666665422 479999999999999999999987543
No 42
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=74.93 E-value=17 Score=30.55 Aligned_cols=95 Identities=9% Similarity=0.093 Sum_probs=59.1
Q ss_pred ccceeeeccCCceeeEEEEEEEcCc-cEEEEEeec-------cccccccccccccEEEeeccCCCCCCCcccccCCCcce
Q 011274 373 GCELLKRTRKGDLHWKIVSVYINRL-NQVMLKMKS-------RHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRR 444 (489)
Q Consensus 373 G~eLlkrTrkG~lhwk~VSVyink~-~qV~LKmKS-------kHv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~ 444 (489)
-|-|.|+.+.+.-.||.==+.++.. +..+.=.|. +..-|.|.-..-+.|..+..+ +....+.
T Consensus 18 ~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~~~----------~~~~~~~ 87 (126)
T 1v5p_A 18 CGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIATPK----------QKPKTPF 87 (126)
T ss_dssp ECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECCTT----------TSCSCSS
T ss_pred EEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCCcc----------cCCCCCE
Confidence 4788888766666788877777643 433333343 233344433332333322211 0112446
Q ss_pred eeeeeecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 445 YFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 445 YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
.|-+.|.. +..-|.|+|+.+.+.|++.|...+.
T Consensus 88 ~F~i~t~~-r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 88 CFVINALS-QRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp EEEEECSS-CEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred EEEEECCC-EEEEEECCCHHHHHHHHHHHHHHHh
Confidence 78888876 7999999999999999999987543
No 43
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=74.42 E-value=28 Score=26.98 Aligned_cols=93 Identities=14% Similarity=0.169 Sum_probs=54.4
Q ss_pred hccceeeeccCCceeeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcceeeee
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGL 448 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFgl 448 (489)
+.|-|+|+... .-.||.--+.+..+ .+.=-|++ ..-|.|.-. .+.|..+..+ + .......|-|
T Consensus 10 ~~G~L~K~g~~-~~~Wk~R~fvL~~~--~L~yy~~~~~~~~~g~i~L~-~~~v~~~~~~----~------~~~~~~~f~i 75 (118)
T 1v89_A 10 KMGWLKKQRSI-VKNWQQRYFVLRAQ--QLYYYKDEEDTKPQGCMYLP-GCTIKEIATN----P------EEAGKFVFEI 75 (118)
T ss_dssp EEEEEEEECSS-SSCEEEEEEEEETT--EEEEESSSSCCSCSEEECST-TEEEEEECCC----S------SCCCCCEEEE
T ss_pred EEEEEEecCCC-CCCccEEEEEEECC--EEEEEeCCCCCCceEEEECC-CCEEEEcCcC----c------ccCCcceEEE
Confidence 45778887532 23477776666432 22222222 233444332 2333333322 1 1124568989
Q ss_pred ee-------cccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 449 KT-------VLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 449 kT-------a~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
.| ...+.+.|.|++..+.+.|++.|+..+.
T Consensus 76 ~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 76 IPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp EESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 88 2457899999999999999999988654
No 44
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=73.87 E-value=3.7 Score=31.86 Aligned_cols=35 Identities=11% Similarity=0.072 Sum_probs=29.6
Q ss_pred cceeeeeeecccceEEEEeCCcchhhhHHHHHHHH
Q 011274 442 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARL 476 (489)
Q Consensus 442 ~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~L 476 (489)
+...|-|.|....+..|.|+|..+.+.|++.|+.-
T Consensus 57 ~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a 91 (103)
T 3rcp_A 57 DNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSS 91 (103)
T ss_dssp CSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTT
T ss_pred CCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHH
Confidence 34679998874579999999999999999998753
No 45
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=72.30 E-value=4.4 Score=37.19 Aligned_cols=36 Identities=6% Similarity=0.093 Sum_probs=31.9
Q ss_pred cceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 442 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 442 ~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
....|-|.|.+ +...|.|++..+.+.|++.|+..+.
T Consensus 120 k~~~F~I~t~~-r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 120 KENGIDIIMAD-RTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp TTSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEcCC-cEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 45689999987 7999999999999999999998774
No 46
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=72.30 E-value=23 Score=29.76 Aligned_cols=99 Identities=12% Similarity=0.043 Sum_probs=59.9
Q ss_pred hccceeeeccCCceeeEEEEEEEcCccEEEEEeec------cccccccccccccEEEeeccCCCCCCCcccccCCCccee
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKS------RHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRY 445 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKS------kHv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~Y 445 (489)
+.|-|.|+.. ..--|+.-=+.+..+ .+.=-|+ ...-|.|.= ..|.|..+.++- +.+-........-
T Consensus 8 k~G~L~Kk~~-~~k~W~~rwfVL~~~--~L~yyK~~~~~~d~~P~gsI~L-~~c~v~~~~~~~----~~~~~~~~~~~~~ 79 (120)
T 4a6h_A 8 KSGFLERRSK-FLKSYSKGYYVLTPN--FLHEFKTADRKKDLVPVMSLAL-SECTVTEHSRKN----STSSPNSTGSDAK 79 (120)
T ss_dssp EEEEEEEEET-TTTEEEEEEEEECSS--EEEEESSCCTTTCCSCSEEEEG-GGEEEEEECCCC----C---------CCE
T ss_pred EEEEEEEcCC-CCCCCccEEEEEeCC--EEEEEcCCCcCcCCCceEEEEC-CCCEEEEccccc----ccccccccCCCcE
Confidence 4577888775 223577665555432 3333332 234566666 477777766551 1000000013456
Q ss_pred eeeeecccc------eEEEEeCCcchhhhHHHHHHHHHH
Q 011274 446 FGLKTVLRG------VVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 446 FglkTa~~G------vvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
|-|++.+.| ...|.++|+.+.+.|++.|+.+..
T Consensus 80 F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~~ 118 (120)
T 4a6h_A 80 FVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILTS 118 (120)
T ss_dssp EEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred EEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 888887755 799999999999999999998753
No 47
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=72.14 E-value=43 Score=28.06 Aligned_cols=97 Identities=8% Similarity=0.051 Sum_probs=56.0
Q ss_pred HHHhhccceeeeccCCceeeEEEEEEEcCccEEEEEeeccccccccccccccEEEeeccCCCCCCCccc---ccCCCcce
Q 011274 368 ELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHL---LEGGEDRR 444 (489)
Q Consensus 368 e~larG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSkHv~GaftKKKK~VV~~V~~d~paWpgr~~---~e~~e~r~ 444 (489)
.++.. |+|.+-.++..-.-+.|.+|+=.+--|+-+-+... .| ++ .+.+|-++. +-.+ .+.+.-.-
T Consensus 7 ~lv~e-G~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~-~~------~~-~~~~~~~L~---~~~v~d~~d~~~~~n 74 (113)
T 1zc3_B 7 YLVYN-GDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQR-RG------MY-RYNALYPLD---RLAVVNVKDNPPMKD 74 (113)
T ss_dssp CEEEE-EEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCT-TS------CE-EEEEEEETT---TCEEEEECCBTTBSS
T ss_pred EEEEe-CcEEEEccccCCCCccEEEEecCCEEEEEEEeccC-cc------cE-EEEEEEEcc---cCEEEECCCCcccce
Confidence 34444 68888777665566678777754444444443221 12 11 122221110 1111 11223456
Q ss_pred eeeeeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 445 YFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 445 YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
-|=|.+.+ ...-|.|++..+|+.|.+.|+.-.
T Consensus 75 ~f~i~~~~-~s~~~~aes~~eK~~Wl~~~~~a~ 106 (113)
T 1zc3_B 75 MFKLLMFP-ESRIFQAENAKIKREWLEVLEETK 106 (113)
T ss_dssp EEEEEETT-EEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEEeCC-ceEEEEcCCHHHHHHHHHHHHHHH
Confidence 67788776 678999999999999999998754
No 48
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=70.90 E-value=17 Score=39.95 Aligned_cols=104 Identities=11% Similarity=0.107 Sum_probs=63.2
Q ss_pred hHHHHhhccceeeeccCCceeeEEEEEEEcCccEE-EEEeeccccccccccccccE----EEeeccCC-CCCC----Ccc
Q 011274 366 SRELLARGCELLKRTRKGDLHWKIVSVYINRLNQV-MLKMKSRHVAGTITKKKKNV----VLEVIPDM-PAWP----GRH 435 (489)
Q Consensus 366 s~e~larG~eLlkrTrkG~lhwk~VSVyink~~qV-~LKmKSkHv~GaftKKKK~V----V~~V~~d~-paWp----gr~ 435 (489)
-.+.|.+|+.|.|..+++. +-|.+.+.++.++.. +=+-.+| ..+.+ |.+|+..- ..+| .|+
T Consensus 13 v~~~L~~Gt~~~K~~~~~~-~~k~~~frLd~d~~~l~W~~~~k--------~~~~l~I~~IkeIR~G~~s~~pk~~~~~e 83 (799)
T 2zkm_X 13 VKAYLSQGERFIKWDDETT-VASPVILRVDPKGYYLYWTYQSK--------EMEFLDITSIRDTRFGKFAKMPKSQKLRD 83 (799)
T ss_dssp CCHHHHHCEEEEEECTTTC-CEEEEEEEECTTSCEEEEEETTS--------CEEEEEGGGEEEEEEGGGSCCCCSHHHHH
T ss_pred ccHHHhCCCEEEEEcCCCc-ceeEEEEEEcCCCCEEEEccCCC--------cCceEeeeeeHHhhcCCCCCCCchHHHHH
Confidence 3478999999999988774 337788888877654 4443221 12222 34444210 1122 111
Q ss_pred ccc-----CCCcceeeeeeecccc----eEEEEeCCcchhhhHHHHHHHHHH
Q 011274 436 LLE-----GGEDRRYFGLKTVLRG----VVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 436 ~~e-----~~e~r~YFglkTa~~G----vvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
.+. ...+.++|=|-..... .+-|-|.+..+.+.|++|+..|+.
T Consensus 84 ~~~~~~~~~~~e~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~ 135 (799)
T 2zkm_X 84 VFNMDFPDNSFLLKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVK 135 (799)
T ss_dssp HTTCSSTTCCGGGTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred HhcccCcccccccceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 110 1134567755444423 378999999999999999999985
No 49
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=70.84 E-value=6.2 Score=32.07 Aligned_cols=38 Identities=8% Similarity=0.232 Sum_probs=32.5
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
.....|-|+|.+.....|.|+|..+.+.|.+.|+..+.
T Consensus 82 kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~ 119 (122)
T 1dro_A 82 KKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSD 119 (122)
T ss_dssp SSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 35678999998767899999999999999999987653
No 50
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=70.61 E-value=18 Score=30.07 Aligned_cols=38 Identities=11% Similarity=0.316 Sum_probs=32.4
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
.....|-|.|.+....-|.|+|+.+.+.|++.|+.-+.
T Consensus 87 kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~ 124 (129)
T 2p0d_A 87 SRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIE 124 (129)
T ss_dssp SSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 34578999999855789999999999999999998664
No 51
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=70.04 E-value=14 Score=35.32 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=28.6
Q ss_pred ceeeeeeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 443 RRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 443 r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
...|-|.+.+...+.|-|.|..+++.|.+.|..+.
T Consensus 314 ~~~F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~ 348 (354)
T 1dbh_A 314 KHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQ 348 (354)
T ss_dssp CSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CccEEEecCCCCEEEEEeCCHHHHHHHHHHHHHHH
Confidence 46677766543579999999999999999998764
No 52
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=68.90 E-value=38 Score=27.32 Aligned_cols=37 Identities=19% Similarity=0.307 Sum_probs=32.0
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
.....|-|.|.+.....|.++|..+.+.|.+.|+.-+
T Consensus 64 ~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~ 100 (112)
T 3cxb_B 64 DRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAV 100 (112)
T ss_dssp SCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 4567999998876789999999999999999998654
No 53
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=66.91 E-value=13 Score=41.66 Aligned_cols=102 Identities=13% Similarity=0.198 Sum_probs=61.2
Q ss_pred hHHHHhhccceeeeccC-CceeeEEEEEEEcCccEEEEEeeccccccccccccccEEEeec--cCCCCCC---------C
Q 011274 366 SRELLARGCELLKRTRK-GDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVI--PDMPAWP---------G 433 (489)
Q Consensus 366 s~e~larG~eLlkrTrk-G~lhwk~VSVyink~~qV~LKmKSkHv~GaftKKKK~VV~~V~--~d~paWp---------g 433 (489)
-.+.|.+|+.|.|.+++ +. -|.+-++++.++..+.=-.++ |+.-+++|. .|+-..- .
T Consensus 17 Vp~~L~~Gt~f~K~~~~~~~--~k~~~frLD~d~~~L~W~~~~---------ke~~~l~Is~IkeIR~G~~a~~pKd~kl 85 (885)
T 3ohm_B 17 VVETLRRGSKFIKWDEETSS--RNLVTLRVDPNGFFLYWTGPN---------MEVDTLDISSIRDTRTGRYARLPKDPKI 85 (885)
T ss_dssp CCHHHHHCEEEEEECTTCCS--CCEEEEEECTTSCEEEEECGG---------GCEEEEEGGGEEEEEETTTSCCCCSHHH
T ss_pred ccHHHhCCCeEEEECCCCCC--cEEEEEEECCCCCEEEEeCCC---------CCCceEeeehhhhhhcCcCCCCCccHHH
Confidence 45889999999999988 54 356888888877655432211 222223332 2221110 1
Q ss_pred ccccc-----CCCcceeeeeeecccc----eEEEEeCCcchhhhHHHHHHHHHH
Q 011274 434 RHLLE-----GGEDRRYFGLKTVLRG----VVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 434 r~~~e-----~~e~r~YFglkTa~~G----vvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
|...+ ...+.+.|=|....+. .+-|-|.+..+.+.|++|+..|+.
T Consensus 86 r~~~~~~~~~~~~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~ 139 (885)
T 3ohm_B 86 REVLGFGGPDARLEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAM 139 (885)
T ss_dssp HHCC---------CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred HHHhccCcccCcccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHh
Confidence 22221 1234466655444322 388999999999999999999985
No 54
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=64.99 E-value=64 Score=31.02 Aligned_cols=88 Identities=10% Similarity=0.155 Sum_probs=49.8
Q ss_pred eeEEEEEEEcCccEEEEEeeccccccccccccccEEEeec--cCCCCCCCcccccC-CCcceeeeeeecc-cceEEEEeC
Q 011274 386 HWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVI--PDMPAWPGRHLLEG-GEDRRYFGLKTVL-RGVVEFECR 461 (489)
Q Consensus 386 hwk~VSVyink~~qV~LKmKSkHv~GaftKKKK~VV~~V~--~d~paWpgr~~~e~-~e~r~YFglkTa~-~GvvEFeC~ 461 (489)
.++.+.||+=.+-=|+.|-++..--| +.+..++++-+.. .++ .+.+. ..+..-|-|.... ...+.|-|.
T Consensus 236 k~~~r~~fLF~d~Ll~~k~~~~~~~~-~~~~~~y~~k~~i~l~~~------~v~e~~~~~~~~F~i~~~~~~~~~~l~a~ 308 (353)
T 1kz7_A 236 KPMQRHLFLHEKAVLFCKKREENGEG-YEKAPSYSYKQSLNMTAV------GITENVKGDTKKFEIWYNAREEVYIIQAP 308 (353)
T ss_dssp SCEEEEEEEESSEEEEEEEECCCCSS-CCCSCEEEEEEEEEGGGE------EEECCBTTBTTEEEEEETTTTEEEEEECS
T ss_pred CcceeEEEEECCEEEEEEeccccccC-CCCCCeEEEEEEeEcccc------eeeEcCCCCCceEEEEECCCCcEEEEECC
Confidence 46677788766677777776532111 2222333322111 000 00110 0134567775432 246899999
Q ss_pred CcchhhhHHHHHHHHHHHH
Q 011274 462 SQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 462 sq~~~q~W~~gI~~LL~~~ 480 (489)
+..+++.|.+.|+..+...
T Consensus 309 s~~ek~~W~~~i~~ai~~~ 327 (353)
T 1kz7_A 309 TPEIKAAWVNAIRKVLTSQ 327 (353)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987443
No 55
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=61.48 E-value=46 Score=32.14 Aligned_cols=40 Identities=13% Similarity=0.292 Sum_probs=29.5
Q ss_pred cceeeeeeecc--cceEEEEeCCcchhhhHHHHHHHHHHHHH
Q 011274 442 DRRYFGLKTVL--RGVVEFECRSQREYDIWTQGVARLLNVAA 481 (489)
Q Consensus 442 ~r~YFglkTa~--~GvvEFeC~sq~~~q~W~~gI~~LL~~~~ 481 (489)
...+|-+.+.. ...++|-|.|..+++.|.+.|+..+....
T Consensus 331 ~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~ 372 (385)
T 1txd_A 331 NKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVK 372 (385)
T ss_dssp CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 34556555421 25799999999999999999999875443
No 56
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=61.02 E-value=23 Score=35.31 Aligned_cols=99 Identities=12% Similarity=0.164 Sum_probs=58.7
Q ss_pred hccceeeeccCCceeeEEEEEEEcCccEEEEEeecc---ccccccccccccEEEeeccCCCCCCCcccccCCCcceeeee
Q 011274 372 RGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR---HVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGL 448 (489)
Q Consensus 372 rG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSk---Hv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFgl 448 (489)
+.|-|.|+.....-.||.-=+.+. .+. +.=-|+. ..-|.|.-.....|+.|....|.= . .+......|-|
T Consensus 271 k~G~L~K~g~~~~k~WKkRwFVL~-~~~-L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~--~---~~~~~~~~F~I 343 (386)
T 3lju_X 271 KEGYMEKTGPKQTEGFRKRWFTMD-DRR-LMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPS--T---QGHHWPHGITI 343 (386)
T ss_dssp EEEEEEECCTTSCSCCEEEEEEEE-TTE-EEEESSTTCSBCSEEEECCCGGGTCEEEESCCTT--C---CSCCSCEEEEE
T ss_pred eeeeEEEECCCCCCCCcccEEEEE-CCE-EEEEecCCCcccceEEEeecceeeeeecccCCcc--c---cccCCCcEEEE
Confidence 457788876665345665544443 222 2222222 223444444444445555443310 0 01011477999
Q ss_pred eecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 449 KTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 449 kTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
.|.+ ++..|.|++..+.+.|++.|+..+.
T Consensus 344 ~t~~-rty~l~A~s~~e~~~Wi~aL~~~i~ 372 (386)
T 3lju_X 344 VTPD-RKFLFACETESDQREWVAAFQKAVD 372 (386)
T ss_dssp ECSS-CEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EeCC-eEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 9987 7999999999999999999999874
No 57
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=60.84 E-value=44 Score=26.62 Aligned_cols=40 Identities=13% Similarity=0.185 Sum_probs=31.5
Q ss_pred cceeeeeee---cccceEEEEeCCcchhhhHHHHHHHHHHHHH
Q 011274 442 DRRYFGLKT---VLRGVVEFECRSQREYDIWTQGVARLLNVAA 481 (489)
Q Consensus 442 ~r~YFglkT---a~~GvvEFeC~sq~~~q~W~~gI~~LL~~~~ 481 (489)
....|-|.+ ......-|.+++..+.+.|++.|+.......
T Consensus 71 ~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 113 (125)
T 1unq_A 71 RPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLK 113 (125)
T ss_dssp STTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence 456898885 2336788999999999999999998775443
No 58
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=59.21 E-value=54 Score=31.04 Aligned_cols=40 Identities=18% Similarity=0.295 Sum_probs=33.6
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~~ 480 (489)
.....|-|.|.......|.|+|..+.+.|++.|+......
T Consensus 87 kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 87 KKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASL 126 (263)
T ss_dssp SCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 3567899999765789999999999999999999876443
No 59
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=58.36 E-value=24 Score=31.61 Aligned_cols=94 Identities=12% Similarity=0.120 Sum_probs=54.1
Q ss_pred eeeccCCceeeEEEEEEEcCccEEEEEe-eccccccccccccccEEEeeccCCCCCCCcccccCCCcceeeeeeecc---
Q 011274 377 LKRTRKGDLHWKIVSVYINRLNQVMLKM-KSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVL--- 452 (489)
Q Consensus 377 lkrTrkG~lhwk~VSVyink~~qV~LKm-KSkHv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~e~r~YFglkTa~--- 452 (489)
.|.+++|. |=|.+..|= +--|+-|+ ++|-.+++|+-+...=+.|+.-. ..++......|=|....
T Consensus 26 ~K~~~kg~-qqR~~FLFN--D~LL~TK~~~kkk~~~~Y~vr~~~~L~gm~V~--------~~e~e~~p~~~~l~s~~~G~ 94 (140)
T 3qwm_A 26 NKPQKLGL-HQREIFLFN--DLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVL--------LFENQYYPNGIRLTSSVPGA 94 (140)
T ss_dssp TSCCCTTT-TEEEEEEES--SCEEEEECCC---CCCCCCCEEEECCTTEEEE--------EECCSSCTTEEEEEECCTTS
T ss_pred cccccccc-cceEEEEec--chhhheeecccCCCCCceEEEEEeeecceEEE--------cccCCCCceEEEEEecCCCC
Confidence 68889985 888887753 34566663 23445666665544333333221 11111111222233322
Q ss_pred --cceEEEEeCCcchhhhHHHHHHHHHHHHH
Q 011274 453 --RGVVEFECRSQREYDIWTQGVARLLNVAA 481 (489)
Q Consensus 453 --~GvvEFeC~sq~~~q~W~~gI~~LL~~~~ 481 (489)
+-+|.|-+.++.+.+.|.+.++..+.-..
T Consensus 95 ~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 95 DIKVLINFNAPNPQDRKKFTDDLRESIAEVQ 125 (140)
T ss_dssp CCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 24699999999999999999998764443
No 60
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=54.97 E-value=14 Score=30.59 Aligned_cols=37 Identities=11% Similarity=0.191 Sum_probs=31.5
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
.....|-|+|.+.....|.++|..+-+.|.+.|+.-+
T Consensus 86 krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI 122 (124)
T 3pp2_A 86 SRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGI 122 (124)
T ss_dssp SSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 3567899999885589999999999999999998643
No 61
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=54.32 E-value=58 Score=29.61 Aligned_cols=34 Identities=9% Similarity=0.074 Sum_probs=30.1
Q ss_pred eeeeeeecccceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 444 RYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 444 ~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
..|.|.|.. ++.+|++. ..+.+.|++.|+.+++.
T Consensus 107 ~~F~I~Tp~-RtY~~~d~-~~~AqeWv~aI~~~~~~ 140 (151)
T 1w1g_A 107 KTFFVHTPN-RTYYLMDP-SGNAHKWCRKIQEVWRQ 140 (151)
T ss_dssp SEEEEEETT-EEEEEECT-TSCHHHHHHHHHHHHHH
T ss_pred CEEEEECCC-ceEEEEcC-ccCHHHHHHHHHHHHHH
Confidence 489999998 89999886 88999999999999864
No 62
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=54.12 E-value=15 Score=32.41 Aligned_cols=93 Identities=14% Similarity=0.154 Sum_probs=62.1
Q ss_pred eeeccCCceeeEEEEEEEcCccEEEEEeeccccccccccccccE--EEeeccCCCCCCCcccccCCCcceeeeeeecccc
Q 011274 377 LKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNV--VLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRG 454 (489)
Q Consensus 377 lkrTrkG~lhwk~VSVyink~~qV~LKmKSkHv~GaftKKKK~V--V~~V~~d~paWpgr~~~e~~e~r~YFglkTa~~G 454 (489)
++...+|.+||+-++ .+||||+ -|. .++.|-.|. |..|....|.=+--+++++..+.-||=|+..+ |
T Consensus 23 i~~~~~G~~rfrLka----~NGeiI~--sSe----~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~~f~Lka~N-g 91 (130)
T 2k8e_A 23 LSKSSDNQFRFVLKA----GNGETIL--TSE----LYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKFYFNLKAAN-H 91 (130)
T ss_dssp EEECTTCCEEEEEEC----TTSCEEE--ECC----CBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEEEEEEECTT-S
T ss_pred EEEcCCCCEEEEEEe----CCCCEEE--EcC----CcCCHHHHHHHHHHHHhhccccchheeeeccCCCEEEEEEeCC-C
Confidence 456789999999764 6899999 443 255555442 23334443322323445566788999999988 7
Q ss_pred eEEEEeCCcchhhhHHHHHHHHHHHH
Q 011274 455 VVEFECRSQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 455 vvEFeC~sq~~~q~W~~gI~~LL~~~ 480 (489)
.|-...+.+..+.-=.+||..+...+
T Consensus 92 qvIa~Se~Y~ska~a~~gI~sVk~na 117 (130)
T 2k8e_A 92 QIIGSSQMYATAQSRETGIASVKANG 117 (130)
T ss_dssp CEEEECCCBSSHHHHHHHHHHHHHHT
T ss_pred CEEEEcCCcCCHHHHHHHHHHHHHHC
Confidence 77777766677777778888776543
No 63
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=54.01 E-value=60 Score=30.94 Aligned_cols=37 Identities=14% Similarity=0.284 Sum_probs=27.6
Q ss_pred cceeeeeeecc---cceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 442 DRRYFGLKTVL---RGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 442 ~r~YFglkTa~---~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
...+|.+.+.. ...++|-|.|..+++.|.+.|+..+.
T Consensus 327 ~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~ 366 (368)
T 1xcg_A 327 KRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR 366 (368)
T ss_dssp SSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 34555555432 25799999999999999999988664
No 64
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=52.28 E-value=17 Score=40.28 Aligned_cols=109 Identities=9% Similarity=-0.008 Sum_probs=62.6
Q ss_pred chHHHHhhccceeeeccCCceeeEEEEEEEcCccEEEEEeecccccc--ccccccccEEEeeccCCCCCCCc-----ccc
Q 011274 365 CSRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAG--TITKKKKNVVLEVIPDMPAWPGR-----HLL 437 (489)
Q Consensus 365 cs~e~larG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSkHv~G--aftKKKK~VV~~V~~d~paWpgr-----~~~ 437 (489)
+-.+.|.+|+.|.|.++++.-. +.+.++++..+..+.=-.++. -+ .|. =+-|.+|+..--+-+.+ ...
T Consensus 17 ~vp~~L~~G~~~~K~~~~s~~~-~~~~f~lD~d~~~L~W~~~~k-~~~~~l~---I~~I~eVR~G~~t~~pk~~klr~~~ 91 (816)
T 3qr0_A 17 KVPEQLIKGDKFLKWEEGSSGF-IEILLRVDPKGYFLYWKIEGK-EDTQLLD---LAYVRDIRCAKYAKPPKDKKIKEAG 91 (816)
T ss_dssp CCCHHHHHCEEEEEECTTCCCC-EEEEEEECTTSCEEEECCTTC-SSCEEEE---GGGEEEEEEGGGSCCCCSHHHHHHH
T ss_pred cCCHHHhCCCeEEEECCCCCcc-eeEEEEEcCCCCEEEEeCCCC-CcCcEEE---eeeeeeeecCCcCCCCccHHHHHHH
Confidence 5669999999999999999654 678899988776554322110 00 000 01123333221110000 111
Q ss_pred c------CCCcceeeeeeeccc-ceE---EEEeCCcchhhhHHHHHHHHHH
Q 011274 438 E------GGEDRRYFGLKTVLR-GVV---EFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 438 e------~~e~r~YFglkTa~~-Gvv---EFeC~sq~~~q~W~~gI~~LL~ 478 (489)
+ ...+.+.|=|-...+ ..+ -|-|.+..+.+.|++|+..|+.
T Consensus 92 ~~~g~~~~~~e~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~ 142 (816)
T 3qr0_A 92 TNFGSSNIPLQDKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAY 142 (816)
T ss_dssp HHSSCTTSCHHHHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred HhcCCCcccccccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 1 111445665443332 123 7899999999999999999873
No 65
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=51.38 E-value=83 Score=25.15 Aligned_cols=25 Identities=20% Similarity=0.345 Sum_probs=22.3
Q ss_pred eEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 455 VVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 455 vvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
.+.|.|++..+.+.|++.|+..+..
T Consensus 105 ~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 105 KNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999987743
No 66
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=48.77 E-value=34 Score=28.12 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=29.2
Q ss_pred ceeeeeeecc--cceEEEEeCCcchhhhHHHHHHHHHHHH
Q 011274 443 RRYFGLKTVL--RGVVEFECRSQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 443 r~YFglkTa~--~GvvEFeC~sq~~~q~W~~gI~~LL~~~ 480 (489)
...|=|.+.+ ..++.|.|+++.+.+.|.+.|.....-+
T Consensus 82 ~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~ 121 (124)
T 2w2x_D 82 SFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWKI 121 (124)
T ss_dssp SEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred CEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHhh
Confidence 3458787764 3579999999999999999999765433
No 67
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=44.89 E-value=40 Score=31.97 Aligned_cols=38 Identities=24% Similarity=0.298 Sum_probs=32.0
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
.....|-|.|.+ ++..|.|++..+.+.|++.|+..+.-
T Consensus 76 ~~~~~F~I~t~~-rty~l~A~se~e~~~Wi~aL~~~~~~ 113 (264)
T 1qqg_A 76 KNKHLVALYTRD-EHFAIAADSEAEQDSWYQALLQLHNR 113 (264)
T ss_dssp SCSSEEEEEESS-CEEEEECSSHHHHHHHHHHHHHHC--
T ss_pred CCCcEEEEEECC-EEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 355789999986 79999999999999999999987643
No 68
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=44.77 E-value=44 Score=37.58 Aligned_cols=103 Identities=14% Similarity=0.131 Sum_probs=55.9
Q ss_pred hHHHHhhccceeeeccCCceeeEEEEEEEcCccEEEEEeecc--ccccccccccccEEEeec--cCCCCCCCcccccCCC
Q 011274 366 SRELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSR--HVAGTITKKKKNVVLEVI--PDMPAWPGRHLLEGGE 441 (489)
Q Consensus 366 s~e~larG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSk--Hv~GaftKKKK~VV~~V~--~d~paWpgr~~~e~~e 441 (489)
.++++ +.|+|.+.+++ +.+.+|+=.+--|+.|-|++ .+.|. .+.++++.+.. .++- =++..++..
T Consensus 441 ~r~Li-~eG~l~~~~~k-----~~r~~FLF~D~Ll~~K~~~~~~~~~g~--~~~~y~~k~~i~L~~l~---V~~~~d~~~ 509 (1049)
T 3ksy_A 441 CNEFI-MEGTLTRVGAK-----HERHIFLFDGLMICCKSNHGQPRLPGA--SNAEYRLKEKFFMRKVQ---INDKDDTNE 509 (1049)
T ss_dssp CSCCC-CEEEEEETTCS-----SCEEEEEETTEEEEEECCTTCCCCTTS--CCCSCCCCCEECCSSCC---CCCCCCSSS
T ss_pred cceEE-EeceEEEEccC-----ceEEEEeeCCeEEEEEecCccCCCCCC--CCCceEEEEEEEcCceE---EEECCCCcc
Confidence 34444 34577766644 45666665566777777643 23331 11122221111 0110 001111212
Q ss_pred cceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 442 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 442 ~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
...-|-|...+...+.|.|.+..+++.|.+.|+.+-..
T Consensus 510 ~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~k 547 (1049)
T 3ksy_A 510 YKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYR 547 (1049)
T ss_dssp CCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 34567676655348999999999999999999876543
No 69
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=43.71 E-value=1.6e+02 Score=28.65 Aligned_cols=37 Identities=11% Similarity=0.040 Sum_probs=28.6
Q ss_pred eeeeeeec-ccceEEEEeCCcchhhhHHHHHHHHHHHH
Q 011274 444 RYFGLKTV-LRGVVEFECRSQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 444 ~YFglkTa-~~GvvEFeC~sq~~~q~W~~gI~~LL~~~ 480 (489)
.-|-|.+. ....++|-|.+..+++.|.+.|+..+...
T Consensus 300 ~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 337 (406)
T 2vrw_B 300 HMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNI 337 (406)
T ss_dssp EEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred eeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 45666543 23479999999999999999999887544
No 70
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=43.08 E-value=1.2e+02 Score=28.39 Aligned_cols=37 Identities=11% Similarity=0.156 Sum_probs=28.8
Q ss_pred ceeeeeeec----ccceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 443 RRYFGLKTV----LRGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 443 r~YFglkTa----~~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
.+-|.|... ....+.|.|.|..+++.|.+.|+..+..
T Consensus 269 ~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e 309 (311)
T 1nty_A 269 PCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 309 (311)
T ss_dssp TTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhh
Confidence 356777652 2246999999999999999999988754
No 71
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=43.00 E-value=20 Score=31.25 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=59.4
Q ss_pred eeeccCCceeeEEEEEEEcCccEEEEEeeccccccccccccccE--EEeeccCCCCCCCcccccCCCcceeeeeeecccc
Q 011274 377 LKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNV--VLEVIPDMPAWPGRHLLEGGEDRRYFGLKTVLRG 454 (489)
Q Consensus 377 lkrTrkG~lhwk~VSVyink~~qV~LKmKSkHv~GaftKKKK~V--V~~V~~d~paWpgr~~~e~~e~r~YFglkTa~~G 454 (489)
++...+|.++|+-++ .+||||+- |. .++.|-.|. |-.|....|.=+-=+++++..+.-||-|+..+ |
T Consensus 7 i~~~~~g~~rFrLka----~NgeiI~s--Se----~Y~sk~~a~~gI~sVk~na~~~~~fe~~~~~~gk~yF~Lka~N-g 75 (118)
T 2k49_A 7 LSKSSNDQFKFVLKA----GNGEVILT--SE----LYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKAAN-H 75 (118)
T ss_dssp EEECTTSCEEEEEEC----SSSCEEEE--CC----CBSSHHHHHHHHHHHHHHTTCGGGEEEEEETTTEEEEEEECTT-C
T ss_pred EEEcCCCCEEEEEEE----CCCCEEEE--CC----CcCCHHHHHHHHHHHHHhCcccceEEEEEccCCCEEEEEEcCC-C
Confidence 345678999998764 68999993 54 255554442 22233333322333445556788999999888 6
Q ss_pred eEEEEeCCcchhhhHHHHHHHHHHHH
Q 011274 455 VVEFECRSQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 455 vvEFeC~sq~~~q~W~~gI~~LL~~~ 480 (489)
-|--.-..+..++-=.+||+.+..-+
T Consensus 76 qvIg~Se~Y~s~~~~~~gI~sVk~na 101 (118)
T 2k49_A 76 QIIGTSQMYSSTAARDNGIKSVMENG 101 (118)
T ss_dssp CEEEEBCCCSSHHHHHHHHHHHHHHT
T ss_pred cEEEEcCCcCCHHHHHHHHHHHHHhC
Confidence 66666555666777778888776544
No 72
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=41.81 E-value=1.6e+02 Score=28.74 Aligned_cols=24 Identities=17% Similarity=0.313 Sum_probs=21.9
Q ss_pred ceEEEEeCCcchhhhHHHHHHHHH
Q 011274 454 GVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 454 GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
++..|.|++..+.+.|++.|+..+
T Consensus 304 r~y~l~A~s~ee~~~Wi~aI~~ai 327 (347)
T 2r09_A 304 VVYRISAPSPEEKEEWMKSIKASI 327 (347)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCHHHHHHHHHHHHHHH
Confidence 578899999999999999999865
No 73
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=41.14 E-value=50 Score=31.76 Aligned_cols=37 Identities=16% Similarity=0.181 Sum_probs=28.4
Q ss_pred ceeeeeeecc----cceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 443 RRYFGLKTVL----RGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 443 r~YFglkTa~----~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
.+-|-|.... ...+.|.|.|..+++.|.+.|...+..
T Consensus 279 ~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 279 PCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILES 319 (354)
T ss_dssp TTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 4567765421 136899999999999999999998743
No 74
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=40.96 E-value=37 Score=28.72 Aligned_cols=23 Identities=13% Similarity=0.291 Sum_probs=20.6
Q ss_pred EEEEeCCcchhhhHHHHHHHHHH
Q 011274 456 VEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 456 vEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
..|.|+++.+.+.|++.|+..+.
T Consensus 102 ~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 102 LIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp CEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEECCCHHHHHHHHHHHHHHHh
Confidence 67999999999999999997664
No 75
>2lxb_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; four-helix bundle, protein-protein interaction, GET5 binding GET pathway; NMR {Saccharomyces cerevisiae} PDB: 2lxc_B
Probab=40.57 E-value=18 Score=29.58 Aligned_cols=34 Identities=35% Similarity=0.629 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHcCCChhhHHHHH-HhhhcccCCCchh
Q 011274 259 VAAQCVETAEAMGAEREHLAAVV-SSAVNVRSAGDIM 294 (489)
Q Consensus 259 VAaqCvE~AE~~GA~rd~vaSaV-~SAV~vrspgDim 294 (489)
||-||+| ++.|-+.+....+| ..++..++.-+|.
T Consensus 37 VAiqCI~--~aF~v~~~d~~~~v~~~~~~~q~L~~if 71 (74)
T 2lxb_A 37 VAMDCIS--EAFGFEREAVSGILGKSEFKGQHLADIL 71 (74)
T ss_dssp HHHHHHH--HHHTCCTTTHHHHHTTCCCSSCSSSSCG
T ss_pred HHHHHHH--HHhCCCchhhHHHHHHhcccCCCHHHHH
Confidence 7889998 88899999999899 8888888887775
No 76
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=37.36 E-value=2.5e+02 Score=27.75 Aligned_cols=37 Identities=16% Similarity=0.165 Sum_probs=27.7
Q ss_pred ceeeeeeecc-cceEEEEeCCcchhhhHHHHHHHHHHH
Q 011274 443 RRYFGLKTVL-RGVVEFECRSQREYDIWTQGVARLLNV 479 (489)
Q Consensus 443 r~YFglkTa~-~GvvEFeC~sq~~~q~W~~gI~~LL~~ 479 (489)
...|-|.... ...+.|-|.+..+++.|.+.|+.....
T Consensus 404 ~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~ 441 (466)
T 2pz1_A 404 KNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQ 441 (466)
T ss_dssp CEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 3557776542 247889999999999999999876543
No 77
>4asv_A Small glutamine-rich tetratricopeptide repeat-CON protein 2; chaperone, membrane, tail-anchored, post-translational targe; NMR {Saccharomyces cerevisiae} PDB: 4asw_A
Probab=33.23 E-value=20 Score=30.59 Aligned_cols=34 Identities=35% Similarity=0.629 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHcCCChhhHHHHH-HhhhcccCCCchh
Q 011274 259 VAAQCVETAEAMGAEREHLAAVV-SSAVNVRSAGDIM 294 (489)
Q Consensus 259 VAaqCvE~AE~~GA~rd~vaSaV-~SAV~vrspgDim 294 (489)
||-||+| ++.|-+.+....+| ..++..++.-+|.
T Consensus 49 VAIqCI~--~AF~Vd~~D~~~~v~~~~~g~q~L~eIf 83 (92)
T 4asv_A 49 VAMDCIS--EAFGFEREAVSGILGKSEFKGQHLADIL 83 (92)
T ss_dssp HHHHHHH--HHHTCCGGGHHHHHHHSSBTTCCHHHHH
T ss_pred HHHHHHH--HHhCCCchhhhHHHhhhccCCCCHHHHH
Confidence 7889998 88899999998888 7777766655554
No 78
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=31.47 E-value=45 Score=29.20 Aligned_cols=101 Identities=10% Similarity=0.198 Sum_probs=60.6
Q ss_pred HHHhhccceeeeccCCceeeEEEEEEEcCccEEEEEeeccccccccccccccEEEeeccCCCCCCCcccccCC-Ccceee
Q 011274 368 ELLARGCELLKRTRKGDLHWKIVSVYINRLNQVMLKMKSRHVAGTITKKKKNVVLEVIPDMPAWPGRHLLEGG-EDRRYF 446 (489)
Q Consensus 368 e~larG~eLlkrTrkG~lhwk~VSVyink~~qV~LKmKSkHv~GaftKKKK~VV~~V~~d~paWpgr~~~e~~-e~r~YF 446 (489)
+++..+..+++..+.+..+=|-+-+|.+ --++++-..+. . .|.-|.|--+.++.-. ..|+. +.+..|
T Consensus 27 ~ii~~s~v~~~~~~~~~~~eR~l~LF~~--~Ll~~s~~~~~-~-~f~~kgklPL~g~~V~--------~~ed~~~~~~aF 94 (132)
T 1v61_A 27 NVIFMSQVVMQHGACEEKEERYFLLFSS--VLIMLSASPRM-S-GFMYQGKIPIAGMVVN--------RLDEIEGSDCMF 94 (132)
T ss_dssp CCSCEEEEEBCCSSSSCCCEEEEEECSS--CEEEEECSSSS-S-CCEEEEEECTTTCBCS--------TTCSSSSSCCCE
T ss_pred CeEEEeeEEEEEcccCcceEEEEEEcCC--eEEEEEecCCC-c-eEEEEEEEecceeEEE--------eccccccCccEE
Confidence 5555566667666777776666666653 45566654431 1 2433333333333222 11222 345667
Q ss_pred eeeecccceEEEEeCCcchhhhHHHHHHHHHHHH
Q 011274 447 GLKTVLRGVVEFECRSQREYDIWTQGVARLLNVA 480 (489)
Q Consensus 447 glkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~~~ 480 (489)
=|.-..-..|.|-|.++.+|+.|.+.++.+...+
T Consensus 95 eI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~~~ 128 (132)
T 1v61_A 95 EITGSTVERIVVHCNNNQDFQEWMEQLNRLTKSG 128 (132)
T ss_dssp EEECSSSCEEEECCCCSHHHHHHHHHHHHHHTTS
T ss_pred EEecCCCceEEEEeCCHHHHHHHHHHHHHHHhhc
Confidence 6654443579999999999999999998876544
No 79
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=30.12 E-value=3.1e+02 Score=26.82 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=26.7
Q ss_pred eeeeeeecc-cceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 444 RYFGLKTVL-RGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 444 ~YFglkTa~-~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
..|-|.... ...+.|-|.+..+++.|.+.|.....
T Consensus 328 ~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~ 363 (402)
T 2dfk_A 328 NAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERK 363 (402)
T ss_dssp SEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred eeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 457666543 23789999999999999999987543
No 80
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=29.22 E-value=2.9e+02 Score=26.07 Aligned_cols=34 Identities=6% Similarity=0.166 Sum_probs=26.0
Q ss_pred eeeeeeec---ccceEEEEeCCcchhhhHHHHHHHHH
Q 011274 444 RYFGLKTV---LRGVVEFECRSQREYDIWTQGVARLL 477 (489)
Q Consensus 444 ~YFglkTa---~~GvvEFeC~sq~~~q~W~~gI~~LL 477 (489)
..|-|... ....+.|-|.+..+++.|.+.|+..+
T Consensus 309 ~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai 345 (346)
T 2z0q_A 309 NFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAK 345 (346)
T ss_dssp SEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhh
Confidence 45766542 22478999999999999999998753
No 81
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=26.72 E-value=82 Score=26.14 Aligned_cols=35 Identities=9% Similarity=0.110 Sum_probs=29.4
Q ss_pred CcceeeeeeecccceEEEEeCCcchhhhHHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGVVEFECRSQREYDIWTQGVARL 476 (489)
Q Consensus 441 e~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~L 476 (489)
+....|=|.+.+ .+.-|.++|+.+.+.|.+.|+..
T Consensus 70 ~~~~~Fki~~~~-~~y~f~A~s~e~~~~Wl~al~~A 104 (112)
T 2coc_A 70 DSGHVWKLQWAK-QSWYLSASSAELQQQWLETLSTA 104 (112)
T ss_dssp SSSEEEEEEETT-EEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCC-eEEEEEcCCHHHHHHHHHHHHHH
Confidence 356788888776 68999999999999999988763
No 82
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=26.69 E-value=2.9e+02 Score=28.50 Aligned_cols=38 Identities=11% Similarity=0.044 Sum_probs=27.6
Q ss_pred eeeeeeecc-cceEEEEeCCcchhhhHHHHHHHHHHHHH
Q 011274 444 RYFGLKTVL-RGVVEFECRSQREYDIWTQGVARLLNVAA 481 (489)
Q Consensus 444 ~YFglkTa~-~GvvEFeC~sq~~~q~W~~gI~~LL~~~~ 481 (489)
.-|-|.+.+ ...++|-|.+..+++.|.+.|+..+....
T Consensus 472 ~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~ 510 (587)
T 3ky9_A 472 HMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 510 (587)
T ss_dssp EEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred ceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence 345555543 24699999999999999999999885443
No 83
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=26.64 E-value=36 Score=31.12 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=28.1
Q ss_pred cceeeeeeecccceEEEEeCCcchhhhHHHHHHH
Q 011274 442 DRRYFGLKTVLRGVVEFECRSQREYDIWTQGVAR 475 (489)
Q Consensus 442 ~r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~ 475 (489)
...-|-|.|.+ +++.|.+++..+.+.|...||+
T Consensus 194 ~~~~f~iit~~-r~~~~~a~s~~e~~~Wi~~lq~ 226 (228)
T 3tfm_A 194 RPNSFVIITAN-RVLHCNADTPEEMHHWITLLQR 226 (228)
T ss_dssp CTTEEEEEETT-EEEEEECSSHHHHHHHHHHHCS
T ss_pred CCCcEEEEeCC-ceEEEEcCCHHHHHHHHHHHhh
Confidence 34567788887 8999999999999999999874
No 84
>3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A
Probab=26.42 E-value=50 Score=30.84 Aligned_cols=36 Identities=28% Similarity=0.454 Sum_probs=30.4
Q ss_pred ceeeeeeecccceEEEEeCCcchhhhHHHHHHHHHH
Q 011274 443 RRYFGLKTVLRGVVEFECRSQREYDIWTQGVARLLN 478 (489)
Q Consensus 443 r~YFglkTa~~GvvEFeC~sq~~~q~W~~gI~~LL~ 478 (489)
.++|-|--.....+.|-+.|...+-.|++|+..||.
T Consensus 115 ~laFSii~~~~~~L~fvA~s~~~~~~W~DGL~~Llg 150 (203)
T 3a98_B 115 ELAFSILYDSNCQLNFIAPDKHEYCIWTDGLNALLG 150 (203)
T ss_dssp GGEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHTT
T ss_pred ceEEEEecCCCceEEEecCCHHHHHHHHHHHHHHhc
Confidence 379987655545899999999999999999999874
No 85
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=25.57 E-value=2.9e+02 Score=22.90 Aligned_cols=96 Identities=15% Similarity=0.098 Sum_probs=52.4
Q ss_pred cceeeeccCCcee--eEEEEEEEcCccEEEEEeec----cccccccccccccEEEeeccC--CCCCCCcccccCCCccee
Q 011274 374 CELLKRTRKGDLH--WKIVSVYINRLNQVMLKMKS----RHVAGTITKKKKNVVLEVIPD--MPAWPGRHLLEGGEDRRY 445 (489)
Q Consensus 374 ~eLlkrTrkG~lh--wk~VSVyink~~qV~LKmKS----kHv~GaftKKKK~VV~~V~~d--~paWpgr~~~e~~e~r~Y 445 (489)
|-|.+--+.|..+ |+.--+.++...-.+-+.+. +...|.|--.+-.-|-.|-.+ +++ ...+-.+-
T Consensus 5 Gwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~-------~~~~~p~i 77 (117)
T 2rov_A 5 GWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRA-------DAKEIPRI 77 (117)
T ss_dssp EEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSS-------CTTTGGGE
T ss_pred EEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEccccccccc-------ccccCCcE
Confidence 4444422334444 99888888653323333322 123344433222233333221 111 11134567
Q ss_pred eeeeecc-----cceEEEEeCCcchhhhHHHHHHHH
Q 011274 446 FGLKTVL-----RGVVEFECRSQREYDIWTQGVARL 476 (489)
Q Consensus 446 FglkTa~-----~GvvEFeC~sq~~~q~W~~gI~~L 476 (489)
|-|.+.+ .+.+-|.+.|..+++.|+..|...
T Consensus 78 F~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~ 113 (117)
T 2rov_A 78 FQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKK 113 (117)
T ss_dssp EEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHH
Confidence 8887642 368999999999999999988754
No 86
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=22.67 E-value=89 Score=27.06 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=29.4
Q ss_pred Ccceeeeeeecccce-EEEEeCCcchhhhHHHHHHH
Q 011274 441 EDRRYFGLKTVLRGV-VEFECRSQREYDIWTQGVAR 475 (489)
Q Consensus 441 e~r~YFglkTa~~Gv-vEFeC~sq~~~q~W~~gI~~ 475 (489)
.+.-.|=|.+.+.|. -.|.++++.+...|.+.|+.
T Consensus 74 ~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~ 109 (126)
T 2dtc_A 74 EHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDD 109 (126)
T ss_dssp TSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHH
Confidence 456789999885454 89999999999999999987
No 87
>2y39_A Nickel and cobalt resistance protein CNRR; metal binding protein; 1.41A {Cupriavidus metallidurans} PDB: 2y3b_A 2y3d_A 2y3g_A* 2y3h_A 3epv_A*
Probab=20.89 E-value=71 Score=28.17 Aligned_cols=41 Identities=24% Similarity=0.272 Sum_probs=32.3
Q ss_pred chhhhhhhHHHHhHHHHhhhhhhhhHHHH-----HHHHHHHHHHHH
Q 011274 190 TVGRWLKDRREKKKEEARVHNAQLHAAIT-----VAGVAAAVAAIA 230 (489)
Q Consensus 190 tvgrWlKd~keKKKEE~R~~nAqvHAAVS-----VAgVAAAVAAvA 230 (489)
.|..=|+.+++..+++.|..|+++.+|+. =-.|.+||--+=
T Consensus 31 aie~~fa~~r~~le~emRaan~~La~ai~~~~~~~p~V~aaid~~h 76 (118)
T 2y39_A 31 LKEDAFAQRRREIETRLRAANGKLADAIAKNPAWSPEVEAATQEVE 76 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHH
Confidence 66677889999999999999999999986 355666555443
No 88
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=20.49 E-value=2.5e+02 Score=25.40 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=27.2
Q ss_pred Ccceeeeeeecc-----cceEEEEeCCcchhhhHHHHHH
Q 011274 441 EDRRYFGLKTVL-----RGVVEFECRSQREYDIWTQGVA 474 (489)
Q Consensus 441 e~r~YFglkTa~-----~GvvEFeC~sq~~~q~W~~gI~ 474 (489)
.....|-|+|.+ +.+.-|-|+|..+.+.|++.|.
T Consensus 234 ~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air 272 (291)
T 3tca_A 234 PTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIR 272 (291)
T ss_dssp SSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHH
Confidence 345679898753 3468899999999999999995
Done!