Query 011275
Match_columns 489
No_of_seqs 228 out of 2796
Neff 10.2
Searched_HMMs 46136
Date Thu Mar 28 23:32:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011275.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011275hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 5.8E-51 1.3E-55 396.5 43.4 436 50-486 10-470 (485)
2 KOG0254 Predicted transporter 100.0 4.2E-45 9.1E-50 372.7 43.3 438 50-487 44-500 (513)
3 TIGR00887 2A0109 phosphate:H+ 100.0 1.3E-43 2.7E-48 361.8 35.6 427 50-484 15-502 (502)
4 PRK10077 xylE D-xylose transpo 100.0 2.6E-42 5.7E-47 351.2 44.0 429 50-487 11-474 (479)
5 TIGR01299 synapt_SV2 synaptic 100.0 5E-42 1.1E-46 355.2 34.3 416 49-478 165-741 (742)
6 PF00083 Sugar_tr: Sugar (and 100.0 2.6E-48 5.6E-53 392.2 -20.1 430 56-485 5-451 (451)
7 TIGR00879 SP MFS transporter, 100.0 2.5E-38 5.4E-43 321.7 42.2 430 50-480 27-480 (481)
8 TIGR00898 2A0119 cation transp 100.0 2E-37 4.4E-42 317.3 32.1 390 72-480 110-504 (505)
9 PRK10642 proline/glycine betai 100.0 4.5E-36 9.7E-41 305.1 37.4 396 52-478 17-437 (490)
10 KOG0252 Inorganic phosphate tr 100.0 3E-38 6.5E-43 295.1 18.4 431 46-488 37-515 (538)
11 KOG0253 Synaptic vesicle trans 100.0 4.7E-35 1E-39 265.5 28.7 387 74-478 101-527 (528)
12 PRK10406 alpha-ketoglutarate t 100.0 7.3E-34 1.6E-38 284.7 33.9 382 52-478 23-430 (432)
13 PRK09952 shikimate transporter 100.0 2.9E-32 6.3E-37 273.2 34.2 384 52-475 23-437 (438)
14 KOG0255 Synaptic vesicle trans 100.0 8.8E-32 1.9E-36 276.2 37.2 379 87-481 117-503 (521)
15 COG2814 AraJ Arabinose efflux 100.0 4.9E-32 1.1E-36 256.5 30.3 364 52-467 14-383 (394)
16 PRK12307 putative sialic acid 100.0 7.8E-32 1.7E-36 270.1 33.3 390 52-474 19-413 (426)
17 PRK11663 regulatory protein Uh 100.0 5.5E-32 1.2E-36 271.2 27.1 397 54-478 26-432 (434)
18 PRK15075 citrate-proton sympor 100.0 1.8E-30 3.9E-35 260.4 36.7 388 52-483 16-432 (434)
19 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.3E-31 2.8E-36 266.3 28.0 385 52-458 9-409 (412)
20 TIGR00903 2A0129 major facilit 100.0 2.3E-31 5E-36 259.3 29.1 348 69-466 9-361 (368)
21 PRK03545 putative arabinose tr 100.0 7.6E-31 1.7E-35 259.6 32.7 366 53-470 11-380 (390)
22 PRK09705 cynX putative cyanate 100.0 2E-30 4.4E-35 256.4 33.9 374 52-478 11-389 (393)
23 TIGR00891 2A0112 putative sial 100.0 1.8E-30 4E-35 258.3 33.2 379 52-452 13-398 (405)
24 PRK11551 putative 3-hydroxyphe 100.0 2.9E-30 6.2E-35 257.1 32.7 371 50-466 14-392 (406)
25 PRK09556 uhpT sugar phosphate 100.0 1.5E-31 3.2E-36 270.6 23.3 387 55-466 33-445 (467)
26 TIGR00893 2A0114 d-galactonate 100.0 1.7E-30 3.6E-35 257.4 25.6 380 65-466 8-395 (399)
27 PRK14995 methyl viologen resis 100.0 1.3E-29 2.9E-34 257.9 31.4 377 51-443 6-411 (495)
28 COG2271 UhpC Sugar phosphate p 100.0 7.1E-31 1.5E-35 244.9 17.9 379 68-469 46-433 (448)
29 PRK03893 putative sialic acid 100.0 3.4E-29 7.4E-34 256.0 28.2 398 52-459 21-442 (496)
30 PRK11273 glpT sn-glycerol-3-ph 100.0 2.7E-28 5.8E-33 245.8 30.8 376 70-474 48-440 (452)
31 PRK10504 putative transporter; 100.0 2.8E-28 6.2E-33 247.5 30.5 379 53-448 12-418 (471)
32 TIGR00890 2A0111 Oxalate/Forma 100.0 7.6E-29 1.6E-33 244.0 25.5 350 70-463 22-375 (377)
33 PRK05122 major facilitator sup 100.0 5.3E-28 1.1E-32 240.2 31.4 372 53-480 17-398 (399)
34 PRK10489 enterobactin exporter 100.0 6.7E-29 1.5E-33 248.0 24.2 377 62-484 28-413 (417)
35 TIGR00711 efflux_EmrB drug res 100.0 1.2E-28 2.6E-33 251.3 25.7 377 53-444 4-409 (485)
36 TIGR00712 glpT glycerol-3-phos 100.0 2.7E-28 5.8E-33 244.9 26.6 385 66-475 42-438 (438)
37 PRK10091 MFS transport protein 100.0 1.2E-27 2.6E-32 236.0 30.6 361 54-466 6-372 (382)
38 TIGR00895 2A0115 benzoate tran 100.0 8.5E-28 1.8E-32 238.4 29.7 374 53-441 19-396 (398)
39 PRK15402 multidrug efflux syst 100.0 2.5E-27 5.4E-32 235.8 30.7 357 50-448 12-373 (406)
40 PRK15403 multidrug efflux syst 100.0 5.5E-27 1.2E-31 233.1 31.6 366 55-463 20-390 (413)
41 PRK03633 putative MFS family t 100.0 1.7E-26 3.6E-31 227.9 34.1 359 53-467 8-369 (381)
42 TIGR00881 2A0104 phosphoglycer 100.0 1.8E-28 3.8E-33 241.6 20.0 365 64-451 8-378 (379)
43 PRK10213 nepI ribonucleoside t 100.0 2.4E-26 5.2E-31 227.2 34.3 345 70-466 39-387 (394)
44 TIGR00900 2A0121 H+ Antiporter 100.0 2.3E-27 5E-32 232.4 26.6 352 58-447 6-365 (365)
45 PLN00028 nitrate transmembrane 100.0 6.9E-27 1.5E-31 236.5 30.6 363 64-466 49-429 (476)
46 PRK12382 putative transporter; 100.0 2.5E-26 5.3E-31 227.7 34.0 356 58-468 22-387 (392)
47 TIGR00894 2A0114euk Na(+)-depe 100.0 9.9E-28 2.1E-32 243.0 23.4 359 80-466 70-446 (465)
48 PRK03699 putative transporter; 100.0 1.2E-26 2.6E-31 229.8 30.6 361 53-464 9-374 (394)
49 TIGR00710 efflux_Bcr_CflA drug 100.0 9.4E-27 2E-31 230.1 28.7 341 57-440 11-356 (385)
50 TIGR00883 2A0106 metabolite-pr 100.0 1.4E-26 3E-31 229.3 29.0 353 62-452 4-383 (394)
51 PRK15034 nitrate/nitrite trans 100.0 7.1E-26 1.5E-30 222.4 32.6 352 66-464 49-448 (462)
52 PRK10473 multidrug efflux syst 100.0 2.4E-26 5.3E-31 227.7 28.7 338 67-457 19-361 (392)
53 cd06174 MFS The Major Facilita 100.0 3.6E-26 7.7E-31 222.6 28.9 340 56-466 4-348 (352)
54 TIGR00899 2A0120 sugar efflux 100.0 5.8E-26 1.2E-30 223.6 29.8 358 59-466 5-370 (375)
55 PRK09874 drug efflux system pr 100.0 9.5E-26 2E-30 224.8 31.2 373 55-470 18-398 (408)
56 KOG1330 Sugar transporter/spin 100.0 4.6E-28 1E-32 228.2 13.3 365 50-445 32-412 (493)
57 PRK11195 lysophospholipid tran 100.0 5.8E-26 1.2E-30 224.4 28.9 365 57-464 9-374 (393)
58 PRK11043 putative transporter; 100.0 1.3E-25 2.7E-30 223.3 29.7 335 65-445 20-357 (401)
59 PF07690 MFS_1: Major Facilita 99.9 9.8E-27 2.1E-31 226.9 20.0 342 58-436 3-352 (352)
60 TIGR00892 2A0113 monocarboxyla 99.9 2.6E-26 5.6E-31 231.2 22.8 372 68-464 36-415 (455)
61 PRK11010 ampG muropeptide tran 99.9 3.3E-25 7.2E-30 224.7 30.2 370 56-467 17-400 (491)
62 TIGR00897 2A0118 polyol permea 99.9 1.5E-24 3.2E-29 215.4 33.9 356 69-465 31-396 (402)
63 PRK11102 bicyclomycin/multidru 99.9 2.3E-25 5.1E-30 219.5 27.4 326 66-433 6-336 (377)
64 PRK10133 L-fucose transporter; 99.9 4E-25 8.7E-30 220.9 29.3 363 54-464 29-427 (438)
65 TIGR00886 2A0108 nitrite extru 99.9 2.1E-25 4.5E-30 218.9 22.9 332 66-431 16-365 (366)
66 PRK11652 emrD multidrug resist 99.9 1.4E-24 3.1E-29 215.2 28.4 334 62-442 19-357 (394)
67 COG2223 NarK Nitrate/nitrite t 99.9 5.1E-24 1.1E-28 199.6 25.9 357 67-466 30-397 (417)
68 PRK08633 2-acyl-glycerophospho 99.9 4.2E-24 9E-29 240.0 30.3 330 75-440 34-379 (1146)
69 TIGR00896 CynX cyanate transpo 99.9 9.7E-24 2.1E-28 206.2 28.2 328 68-447 17-350 (355)
70 KOG2533 Permease of the major 99.9 1.6E-24 3.4E-29 214.8 21.9 269 67-355 62-347 (495)
71 TIGR00885 fucP L-fucose:H+ sym 99.9 1.5E-23 3.2E-28 207.8 28.2 358 54-462 6-404 (410)
72 PRK11646 multidrug resistance 99.9 2.2E-23 4.8E-28 206.5 28.8 356 59-465 18-383 (400)
73 KOG2532 Permease of the major 99.9 6.9E-24 1.5E-28 209.8 24.2 356 86-466 71-443 (466)
74 PRK10054 putative transporter; 99.9 1.3E-23 2.8E-28 207.8 25.7 369 58-473 14-387 (395)
75 PRK15011 sugar efflux transpor 99.9 5.5E-23 1.2E-27 203.5 30.2 362 58-473 22-393 (393)
76 PRK11902 ampG muropeptide tran 99.9 3.7E-22 8.1E-27 198.3 30.0 363 61-468 9-388 (402)
77 TIGR00889 2A0110 nucleoside tr 99.9 6.1E-22 1.3E-26 197.1 31.4 370 61-477 12-409 (418)
78 TIGR00902 2A0127 phenyl propri 99.9 7.7E-22 1.7E-26 194.6 29.4 357 58-466 11-375 (382)
79 PRK09528 lacY galactoside perm 99.9 8.7E-22 1.9E-26 196.8 28.6 365 68-472 27-405 (420)
80 PRK06814 acylglycerophosphoeth 99.9 3.9E-22 8.5E-27 223.4 28.6 342 89-458 53-410 (1140)
81 PRK11128 putative 3-phenylprop 99.9 5.2E-21 1.1E-25 188.7 29.7 350 64-465 17-374 (382)
82 TIGR00901 2A0125 AmpG-related 99.9 1.3E-21 2.8E-26 191.3 23.7 328 67-429 4-355 (356)
83 TIGR00882 2A0105 oligosacchari 99.9 9.2E-21 2E-25 188.0 29.0 365 61-465 12-390 (396)
84 PF06609 TRI12: Fungal trichot 99.9 2.6E-20 5.6E-25 186.9 32.1 360 67-443 60-465 (599)
85 TIGR00924 yjdL_sub1_fam amino 99.9 5.4E-20 1.2E-24 185.8 31.9 160 57-219 16-182 (475)
86 TIGR00805 oat sodium-independe 99.9 4.4E-22 9.6E-27 206.4 16.9 294 57-364 39-412 (633)
87 PRK10207 dipeptide/tripeptide 99.9 9.2E-21 2E-25 191.4 26.0 139 75-216 39-181 (489)
88 TIGR00792 gph sugar (Glycoside 99.9 1.4E-20 3E-25 189.4 24.2 333 75-448 24-383 (437)
89 TIGR00806 rfc RFC reduced fola 99.9 8.3E-21 1.8E-25 183.0 20.6 182 53-239 29-213 (511)
90 PF05977 MFS_3: Transmembrane 99.9 1.4E-19 3.1E-24 182.4 27.4 371 68-478 27-403 (524)
91 KOG2615 Permease of the major 99.9 5.3E-20 1.2E-24 169.2 19.7 143 87-232 67-217 (451)
92 TIGR02718 sider_RhtX_FptX side 99.8 8.4E-19 1.8E-23 173.6 28.7 368 56-465 6-386 (390)
93 PTZ00207 hypothetical protein; 99.8 2.4E-18 5.1E-23 174.0 30.6 170 71-247 47-226 (591)
94 KOG3764 Vesicular amine transp 99.8 2E-20 4.2E-25 173.1 13.9 345 77-464 95-448 (464)
95 COG0738 FucP Fucose permease [ 99.8 1.6E-18 3.4E-23 161.7 26.4 372 57-477 19-416 (422)
96 PRK09584 tppB putative tripept 99.8 6.1E-18 1.3E-22 171.8 28.6 139 76-217 47-189 (500)
97 TIGR01301 GPH_sucrose GPH fami 99.8 3.3E-16 7.1E-21 155.4 30.7 380 70-475 23-476 (477)
98 KOG2504 Monocarboxylate transp 99.8 9.3E-18 2E-22 168.4 19.2 372 70-464 65-470 (509)
99 TIGR00788 fbt folate/biopterin 99.8 1.8E-17 4E-22 166.9 21.4 368 59-447 34-415 (468)
100 COG2807 CynX Cyanate permease 99.8 2.1E-15 4.6E-20 138.9 29.7 349 66-467 27-382 (395)
101 PRK09669 putative symporter Ya 99.7 3.4E-16 7.4E-21 157.6 24.8 331 76-448 35-391 (444)
102 PRK15462 dipeptide/tripeptide 99.7 9.7E-15 2.1E-19 145.6 32.0 144 70-216 28-176 (493)
103 PF03825 Nuc_H_symport: Nucleo 99.7 5.3E-15 1.2E-19 145.0 28.8 341 67-450 18-369 (400)
104 PF11700 ATG22: Vacuole efflux 99.7 3.9E-14 8.4E-19 141.6 31.0 355 90-477 72-474 (477)
105 PRK10429 melibiose:sodium symp 99.7 3E-15 6.4E-20 151.8 21.9 346 69-448 24-396 (473)
106 PRK09848 glucuronide transport 99.7 1.5E-14 3.2E-19 145.9 26.8 328 76-448 34-391 (448)
107 PF13347 MFS_2: MFS/sugar tran 99.7 2.5E-14 5.5E-19 143.3 26.9 331 77-447 28-386 (428)
108 KOG4686 Predicted sugar transp 99.7 1.3E-15 2.8E-20 134.7 13.1 356 75-466 68-439 (459)
109 PRK11462 putative transporter; 99.7 9.1E-14 2E-18 140.0 27.5 325 80-447 39-389 (460)
110 PRK10642 proline/glycine betai 99.6 1.1E-15 2.3E-20 155.8 13.1 180 71-253 270-459 (490)
111 KOG2563 Permease of the major 99.6 7.1E-13 1.5E-17 125.7 28.8 398 44-479 38-459 (480)
112 TIGR01272 gluP glucose/galacto 99.6 1E-13 2.2E-18 132.0 19.1 274 136-456 5-301 (310)
113 PF01306 LacY_symp: LacY proto 99.6 2.2E-14 4.8E-19 138.1 14.5 369 67-476 23-406 (412)
114 COG2211 MelB Na+/melibiose sym 99.6 1.7E-12 3.7E-17 126.4 25.5 325 87-448 47-399 (467)
115 KOG2325 Predicted transporter/ 99.5 9.9E-13 2.2E-17 128.3 17.6 152 42-198 29-186 (488)
116 COG2270 Permeases of the major 99.5 5.5E-11 1.2E-15 112.5 26.2 350 88-477 58-435 (438)
117 TIGR00880 2_A_01_02 Multidrug 99.5 1.8E-13 3.8E-18 114.2 8.0 135 95-230 5-140 (141)
118 KOG0569 Permease of the major 99.4 9.8E-12 2.1E-16 122.3 16.4 225 1-231 214-457 (485)
119 COG3104 PTR2 Dipeptide/tripept 99.4 1.7E-10 3.6E-15 111.8 24.4 136 81-219 56-196 (498)
120 TIGR01299 synapt_SV2 synaptic 99.4 2.5E-12 5.4E-17 134.6 11.4 139 92-232 599-737 (742)
121 PRK15011 sugar efflux transpor 99.3 5.5E-11 1.2E-15 117.8 14.2 154 73-230 238-392 (393)
122 TIGR00890 2A0111 Oxalate/Forma 99.3 2.1E-11 4.6E-16 119.8 11.0 143 74-219 228-372 (377)
123 cd06174 MFS The Major Facilita 99.3 6.7E-11 1.5E-15 114.9 14.3 154 69-225 193-348 (352)
124 PRK05122 major facilitator sup 99.3 4.8E-11 1E-15 118.5 13.3 151 73-228 238-388 (399)
125 TIGR00889 2A0110 nucleoside tr 99.3 2.4E-11 5.2E-16 121.1 10.9 143 89-231 252-405 (418)
126 KOG2816 Predicted transporter 99.3 1.9E-09 4.2E-14 106.8 23.6 311 98-443 72-390 (463)
127 PRK11551 putative 3-hydroxyphe 99.2 1E-10 2.2E-15 116.5 14.3 152 73-226 242-393 (406)
128 PRK12382 putative transporter; 99.2 8.4E-11 1.8E-15 116.5 12.4 147 73-224 238-384 (392)
129 TIGR00887 2A0109 phosphate:H+ 99.2 2.2E-10 4.8E-15 117.3 15.6 161 72-232 309-492 (502)
130 PRK10077 xylE D-xylose transpo 99.2 3.2E-10 7E-15 115.5 15.5 158 71-231 291-460 (479)
131 TIGR00892 2A0113 monocarboxyla 99.2 3.1E-10 6.7E-15 114.6 13.9 149 70-220 260-412 (455)
132 PRK09528 lacY galactoside perm 99.2 1E-10 2.2E-15 117.1 10.0 132 88-220 262-394 (420)
133 PF03137 OATP: Organic Anion T 99.2 4.6E-12 1E-16 128.6 -0.2 143 55-199 7-199 (539)
134 PF03209 PUCC: PUCC protein; 99.2 1E-07 2.2E-12 90.9 28.9 327 78-444 7-362 (403)
135 PRK10054 putative transporter; 99.1 1.5E-09 3.3E-14 107.5 17.0 148 317-474 36-186 (395)
136 PRK09874 drug efflux system pr 99.1 3.3E-10 7.2E-15 112.8 11.8 134 90-224 260-393 (408)
137 PF03092 BT1: BT1 family; Int 99.1 1E-08 2.2E-13 102.2 21.0 153 74-230 13-177 (433)
138 TIGR00898 2A0119 cation transp 99.1 4.1E-10 9E-15 115.5 11.2 133 96-231 363-497 (505)
139 TIGR00883 2A0106 metabolite-pr 99.1 2.9E-10 6.4E-15 112.3 9.8 143 70-214 238-386 (394)
140 TIGR00899 2A0120 sugar efflux 99.1 1E-09 2.2E-14 107.9 12.7 147 78-228 227-373 (375)
141 PRK10213 nepI ribonucleoside t 99.1 8.4E-09 1.8E-13 102.2 19.1 155 312-475 43-200 (394)
142 TIGR00893 2A0114 d-galactonate 99.1 1.5E-09 3.2E-14 107.2 12.9 152 67-221 231-391 (399)
143 PRK09556 uhpT sugar phosphate 99.1 1.4E-09 3.1E-14 110.3 12.8 148 70-220 277-440 (467)
144 PRK11663 regulatory protein Uh 99.1 1.7E-08 3.7E-13 101.4 20.2 155 310-473 44-201 (434)
145 PRK03893 putative sialic acid 99.1 1.1E-09 2.4E-14 112.1 11.9 140 71-213 295-437 (496)
146 KOG3626 Organic anion transpor 99.1 1.4E-09 3E-14 110.9 12.2 284 53-350 99-458 (735)
147 TIGR00710 efflux_Bcr_CflA drug 99.1 7.4E-09 1.6E-13 102.2 17.3 156 312-476 28-186 (385)
148 TIGR02332 HpaX 4-hydroxyphenyl 99.0 1.5E-08 3.3E-13 101.0 19.4 156 311-475 30-194 (412)
149 TIGR00879 SP MFS transporter, 99.0 3.6E-09 7.7E-14 107.5 15.0 161 68-231 301-473 (481)
150 PLN00028 nitrate transmembrane 99.0 2E-08 4.4E-13 101.9 20.3 151 310-470 57-219 (476)
151 TIGR00902 2A0127 phenyl propri 99.0 2.9E-09 6.3E-14 105.1 13.8 133 70-205 224-357 (382)
152 PRK03633 putative MFS family t 99.0 1.7E-09 3.6E-14 106.8 12.0 143 73-221 222-364 (381)
153 PRK15403 multidrug efflux syst 99.0 1.1E-08 2.3E-13 102.1 17.7 153 314-475 41-196 (413)
154 PRK09705 cynX putative cyanate 99.0 3.2E-09 6.9E-14 105.2 13.9 159 70-232 224-385 (393)
155 TIGR00895 2A0115 benzoate tran 99.0 8E-09 1.7E-13 102.3 16.5 158 308-474 36-196 (398)
156 PRK10473 multidrug efflux syst 99.0 1.2E-08 2.6E-13 101.1 17.2 158 310-476 24-184 (392)
157 PRK03699 putative transporter; 99.0 2.2E-09 4.7E-14 106.5 11.8 154 71-228 225-379 (394)
158 PRK10489 enterobactin exporter 99.0 2.4E-09 5.3E-14 107.0 12.2 158 71-231 243-402 (417)
159 PRK03545 putative arabinose tr 99.0 2.7E-08 5.8E-13 98.5 18.8 154 312-474 32-188 (390)
160 TIGR00711 efflux_EmrB drug res 99.0 6.2E-09 1.3E-13 106.2 14.5 158 310-476 23-183 (485)
161 TIGR00903 2A0129 major facilit 99.0 1.7E-08 3.6E-13 98.8 16.9 153 312-474 14-169 (368)
162 TIGR00900 2A0121 H+ Antiporter 99.0 2.6E-08 5.7E-13 97.3 17.3 140 323-466 36-175 (365)
163 TIGR00891 2A0112 putative sial 99.0 4.4E-09 9.6E-14 104.5 11.8 139 73-213 260-400 (405)
164 PRK14995 methyl viologen resis 99.0 2.7E-08 5.9E-13 101.6 17.4 157 311-476 28-188 (495)
165 PRK09952 shikimate transporter 99.0 9.3E-09 2E-13 103.4 13.8 152 78-231 278-435 (438)
166 PRK15402 multidrug efflux syst 99.0 3.7E-08 8.1E-13 98.1 18.0 154 313-475 37-193 (406)
167 TIGR00897 2A0118 polyol permea 98.9 1.1E-08 2.4E-13 101.7 13.4 149 71-224 242-396 (402)
168 PRK12307 putative sialic acid 98.9 4.2E-08 9E-13 98.4 17.6 155 310-474 39-196 (426)
169 TIGR00880 2_A_01_02 Multidrug 98.9 7.2E-09 1.6E-13 86.0 10.0 136 329-473 6-141 (141)
170 PRK11273 glpT sn-glycerol-3-ph 98.9 9.2E-08 2E-12 96.6 20.0 158 311-474 51-212 (452)
171 TIGR00886 2A0108 nitrite extru 98.9 5.7E-08 1.2E-12 95.2 17.9 150 315-473 28-191 (366)
172 PRK15462 dipeptide/tripeptide 98.9 3.3E-08 7.2E-13 99.1 15.9 138 318-463 39-182 (493)
173 COG2814 AraJ Arabinose efflux 98.9 8.8E-08 1.9E-12 91.9 17.7 151 311-471 35-189 (394)
174 PRK11646 multidrug resistance 98.9 5.2E-08 1.1E-12 96.7 16.4 148 316-473 38-188 (400)
175 COG2271 UhpC Sugar phosphate p 98.9 3.5E-08 7.6E-13 93.7 14.0 157 313-478 53-217 (448)
176 PF11700 ATG22: Vacuole efflux 98.9 1.7E-08 3.7E-13 101.3 12.8 153 76-230 307-469 (477)
177 PRK10091 MFS transport protein 98.9 7.7E-08 1.7E-12 95.0 17.4 155 312-475 26-183 (382)
178 PRK10406 alpha-ketoglutarate t 98.9 4.5E-08 9.7E-13 98.3 15.7 143 330-475 72-223 (432)
179 PRK10504 putative transporter; 98.9 9.9E-08 2.1E-12 97.0 18.2 156 310-474 31-189 (471)
180 PF00083 Sugar_tr: Sugar (and 98.9 5E-11 1.1E-15 120.5 -6.2 156 71-231 273-439 (451)
181 PRK11652 emrD multidrug resist 98.9 1.2E-07 2.7E-12 93.9 18.1 155 313-476 32-189 (394)
182 PF07690 MFS_1: Major Facilita 98.9 1.2E-08 2.6E-13 99.3 10.4 150 314-472 22-174 (352)
183 PRK11102 bicyclomycin/multidru 98.9 5.5E-08 1.2E-12 95.8 15.2 153 313-474 15-170 (377)
184 PRK11128 putative 3-phenylprop 98.8 4E-08 8.7E-13 97.0 13.8 131 73-206 227-358 (382)
185 PF01770 Folate_carrier: Reduc 98.8 9.8E-07 2.1E-11 85.2 22.6 180 53-236 7-189 (412)
186 TIGR00881 2A0104 phosphoglycer 98.8 2.7E-08 5.8E-13 97.7 12.4 153 313-474 19-175 (379)
187 TIGR00712 glpT glycerol-3-phos 98.8 1.1E-07 2.4E-12 95.7 16.7 145 324-473 64-209 (438)
188 PF05977 MFS_3: Transmembrane 98.8 2.9E-08 6.2E-13 100.8 12.3 144 70-216 237-381 (524)
189 PRK11195 lysophospholipid tran 98.8 1.3E-07 2.8E-12 93.6 15.9 137 324-474 41-177 (393)
190 TIGR00792 gph sugar (Glycoside 98.8 5.7E-08 1.2E-12 97.7 13.2 112 89-200 258-377 (437)
191 PF05631 DUF791: Protein of un 98.8 1E-06 2.2E-11 82.8 20.0 110 53-169 40-150 (354)
192 TIGR00882 2A0105 oligosacchari 98.8 3.4E-08 7.3E-13 98.0 10.6 134 89-223 255-389 (396)
193 PRK15075 citrate-proton sympor 98.8 9.7E-08 2.1E-12 96.0 13.5 134 70-205 257-396 (434)
194 COG2270 Permeases of the major 98.8 4.8E-08 1E-12 92.9 10.2 170 57-230 260-430 (438)
195 KOG2615 Permease of the major 98.7 4.7E-08 1E-12 91.2 9.5 143 323-475 70-218 (451)
196 TIGR00924 yjdL_sub1_fam amino 98.7 2.3E-07 5E-12 94.1 14.8 129 324-462 51-184 (475)
197 PRK10207 dipeptide/tripeptide 98.7 5E-07 1.1E-11 91.8 17.1 121 330-458 59-182 (489)
198 PRK11043 putative transporter; 98.7 4.7E-07 1E-11 90.0 16.8 146 314-468 31-179 (401)
199 KOG3098 Uncharacterized conser 98.7 9.9E-06 2.1E-10 79.6 25.1 102 94-196 56-157 (461)
200 PRK15034 nitrate/nitrite trans 98.7 3.7E-06 8E-11 83.6 22.1 119 318-441 64-185 (462)
201 TIGR00894 2A0114euk Na(+)-depe 98.7 1.6E-07 3.5E-12 95.3 12.9 143 323-472 78-221 (465)
202 KOG0254 Predicted transporter 98.7 6.6E-07 1.4E-11 91.9 17.0 157 70-231 314-486 (513)
203 KOG0253 Synaptic vesicle trans 98.7 1.3E-07 2.7E-12 87.9 10.3 99 100-198 393-491 (528)
204 PRK09584 tppB putative tripept 98.7 9.1E-07 2E-11 90.3 17.9 118 336-461 72-192 (500)
205 PRK06814 acylglycerophosphoeth 98.7 6.3E-07 1.4E-11 101.3 17.8 143 325-474 56-198 (1140)
206 TIGR00896 CynX cyanate transpo 98.7 9.1E-08 2E-12 93.4 9.7 135 71-208 217-353 (355)
207 COG0477 ProP Permeases of the 98.7 2.4E-07 5.1E-12 87.8 12.3 157 62-218 13-174 (338)
208 PTZ00207 hypothetical protein; 98.7 3.3E-06 7.3E-11 86.4 20.8 153 307-464 45-199 (591)
209 PRK08633 2-acyl-glycerophospho 98.6 2.1E-07 4.5E-12 105.4 12.6 127 73-200 254-381 (1146)
210 PRK11010 ampG muropeptide tran 98.6 1.8E-06 3.9E-11 88.1 17.9 157 311-474 34-198 (491)
211 TIGR02718 sider_RhtX_FptX side 98.6 3.2E-07 7E-12 90.8 12.2 144 74-220 231-382 (390)
212 TIGR00885 fucP L-fucose:H+ sym 98.6 1.6E-06 3.4E-11 86.3 17.0 156 312-473 26-211 (410)
213 KOG2504 Monocarboxylate transp 98.6 2.2E-07 4.8E-12 93.9 10.5 171 57-229 304-476 (509)
214 PRK09848 glucuronide transport 98.6 4.8E-07 1E-11 91.4 12.9 107 91-197 267-382 (448)
215 TIGR00901 2A0125 AmpG-related 98.6 1.8E-06 3.9E-11 84.3 15.6 156 312-474 11-182 (356)
216 TIGR01272 gluP glucose/galacto 98.6 8.6E-07 1.9E-11 84.6 12.5 137 71-213 160-299 (310)
217 PF06609 TRI12: Fungal trichot 98.5 2.2E-06 4.8E-11 87.2 14.6 141 313-463 68-210 (599)
218 KOG0252 Inorganic phosphate tr 98.5 4.2E-07 9.2E-12 87.1 8.4 179 52-231 305-500 (538)
219 KOG3764 Vesicular amine transp 98.5 2.7E-07 5.9E-12 86.8 6.8 148 321-477 106-254 (464)
220 PF06813 Nodulin-like: Nodulin 98.5 2.7E-06 5.8E-11 77.2 13.1 154 70-229 21-182 (250)
221 KOG1330 Sugar transporter/spin 98.5 9.6E-08 2.1E-12 91.7 3.5 158 317-483 64-222 (493)
222 TIGR01301 GPH_sucrose GPH fami 98.4 1.1E-05 2.3E-10 80.9 17.4 162 313-475 28-223 (477)
223 PF03825 Nuc_H_symport: Nucleo 98.4 1.7E-06 3.7E-11 85.2 11.4 162 55-218 211-384 (400)
224 COG2223 NarK Nitrate/nitrite t 98.4 2E-05 4.3E-10 75.3 17.6 153 313-473 38-199 (417)
225 KOG0255 Synaptic vesicle trans 98.4 2.8E-06 6.2E-11 87.5 13.2 136 324-473 121-257 (521)
226 PRK11902 ampG muropeptide tran 98.4 1.3E-05 2.8E-10 79.8 17.3 157 311-474 21-185 (402)
227 PF13347 MFS_2: MFS/sugar tran 98.4 4E-06 8.7E-11 84.1 13.4 136 59-196 233-377 (428)
228 TIGR00805 oat sodium-independe 98.4 5.3E-06 1.2E-10 86.9 14.4 121 322-444 69-233 (633)
229 PRK10429 melibiose:sodium symp 98.4 3.8E-06 8.2E-11 85.4 12.3 107 90-196 268-386 (473)
230 PRK09669 putative symporter Ya 98.3 5.7E-06 1.2E-10 83.5 13.2 108 91-198 267-383 (444)
231 TIGR00806 rfc RFC reduced fola 98.3 6E-05 1.3E-09 74.2 18.0 131 310-451 47-181 (511)
232 PRK10133 L-fucose transporter; 98.3 7.9E-06 1.7E-10 82.1 12.2 131 79-214 288-418 (438)
233 COG2211 MelB Na+/melibiose sym 98.2 1.7E-05 3.8E-10 77.9 13.4 92 80-171 264-357 (467)
234 PF01306 LacY_symp: LacY proto 98.2 4.3E-06 9.4E-11 81.2 7.4 132 90-222 261-393 (412)
235 KOG4686 Predicted sugar transp 98.1 3.8E-05 8.2E-10 69.2 11.7 134 76-213 290-426 (459)
236 TIGR00926 2A1704 Peptide:H+ sy 98.1 0.0011 2.3E-08 69.5 23.9 142 78-222 15-175 (654)
237 PF06779 DUF1228: Protein of u 98.0 2.4E-05 5.3E-10 57.4 6.8 75 69-145 10-84 (85)
238 TIGR00788 fbt folate/biopterin 98.0 3.6E-05 7.8E-10 77.9 10.5 148 80-230 282-447 (468)
239 PF05978 UNC-93: Ion channel r 98.0 6.9E-05 1.5E-09 62.8 10.4 104 93-197 42-145 (156)
240 COG0738 FucP Fucose permease [ 98.0 0.00033 7.2E-09 66.8 15.5 157 316-479 43-220 (422)
241 KOG2532 Permease of the major 98.0 0.00025 5.4E-09 71.1 15.4 153 323-482 75-232 (466)
242 PF06813 Nodulin-like: Nodulin 97.9 0.00034 7.3E-09 63.7 14.6 134 306-444 19-156 (250)
243 COG2807 CynX Cyanate permease 97.9 0.00026 5.6E-09 66.5 13.9 146 70-221 227-377 (395)
244 PF06963 FPN1: Ferroportin1 (F 97.9 0.013 2.8E-07 58.0 25.8 117 317-434 286-407 (432)
245 KOG4332 Predicted sugar transp 97.9 9.9E-05 2.2E-09 66.0 9.6 75 102-179 86-161 (454)
246 KOG2816 Predicted transporter 97.8 0.0002 4.4E-09 71.5 12.3 139 330-480 71-209 (463)
247 COG3104 PTR2 Dipeptide/tripept 97.8 0.0001 2.2E-09 72.3 9.8 126 335-467 75-203 (498)
248 PRK11462 putative transporter; 97.8 0.00049 1.1E-08 69.7 14.0 152 318-473 39-207 (460)
249 KOG3810 Micronutrient transpor 97.7 0.0015 3.3E-08 60.8 14.2 243 100-353 54-303 (433)
250 KOG3762 Predicted transporter 97.7 2.9E-05 6.3E-10 76.2 3.3 144 78-224 398-542 (618)
251 TIGR00769 AAA ADP/ATP carrier 97.4 0.16 3.4E-06 51.1 34.0 111 90-200 45-188 (472)
252 PF02487 CLN3: CLN3 protein; 97.4 0.018 4E-07 56.0 18.9 125 100-230 71-197 (402)
253 KOG3574 Acetyl-CoA transporter 97.3 0.042 9E-07 52.3 19.2 143 51-198 31-190 (510)
254 PF03209 PUCC: PUCC protein; 97.3 0.0041 8.9E-08 59.9 12.7 119 79-199 237-359 (403)
255 KOG0637 Sucrose transporter an 97.3 0.0025 5.5E-08 61.8 11.2 97 102-198 81-200 (498)
256 KOG2533 Permease of the major 97.3 0.0023 4.9E-08 64.6 11.6 143 324-475 84-232 (495)
257 PF12832 MFS_1_like: MFS_1 lik 97.3 0.00073 1.6E-08 49.2 5.6 61 66-128 15-75 (77)
258 KOG2563 Permease of the major 97.1 0.0059 1.3E-07 59.3 11.8 117 324-442 82-198 (480)
259 TIGR00926 2A1704 Peptide:H+ sy 97.0 0.025 5.3E-07 59.4 16.0 130 335-465 37-177 (654)
260 KOG3762 Predicted transporter 96.9 0.0064 1.4E-07 60.3 10.2 79 58-138 18-97 (618)
261 PF05631 DUF791: Protein of un 96.7 0.21 4.5E-06 47.6 18.0 154 314-476 59-222 (354)
262 PF03092 BT1: BT1 family; Int 96.7 0.043 9.3E-07 55.0 14.4 155 316-476 17-181 (433)
263 PF02487 CLN3: CLN3 protein; 96.3 0.023 5E-07 55.4 9.1 107 90-200 283-394 (402)
264 PF00854 PTR2: POT family; In 96.1 0.02 4.3E-07 56.2 8.2 105 119-224 2-118 (372)
265 PF03219 TLC: TLC ATP/ADP tran 96.1 1.2 2.6E-05 45.2 20.3 101 100-200 71-203 (491)
266 KOG2325 Predicted transporter/ 96.0 0.1 2.2E-06 52.1 12.1 144 324-473 74-232 (488)
267 PF13000 Acatn: Acetyl-coenzym 95.9 0.92 2E-05 45.2 18.0 139 57-199 6-176 (544)
268 KOG1479 Nucleoside transporter 95.8 2 4.4E-05 41.9 20.4 90 140-234 116-209 (406)
269 PF12832 MFS_1_like: MFS_1 lik 95.8 0.068 1.5E-06 38.9 7.7 49 309-357 20-71 (77)
270 KOG1237 H+/oligopeptide sympor 95.7 0.33 7.1E-06 50.2 15.0 144 70-216 57-232 (571)
271 TIGR00939 2a57 Equilibrative N 95.5 3.2 6.8E-05 41.6 23.5 90 140-234 105-201 (437)
272 PRK03612 spermidine synthase; 95.3 0.31 6.6E-06 50.0 13.2 131 84-215 46-184 (521)
273 PF07672 MFS_Mycoplasma: Mycop 94.9 0.97 2.1E-05 41.1 13.4 51 173-223 2-56 (267)
274 PF06963 FPN1: Ferroportin1 (F 94.3 3.9 8.4E-05 40.8 17.5 138 326-463 43-193 (432)
275 COG0477 ProP Permeases of the 93.9 1.6 3.6E-05 40.4 13.9 107 324-438 42-151 (338)
276 KOG3098 Uncharacterized conser 93.7 2.2 4.8E-05 42.6 14.3 97 99-196 290-407 (461)
277 TIGR00939 2a57 Equilibrative N 92.3 1.2 2.7E-05 44.5 10.6 107 91-198 310-429 (437)
278 PF05978 UNC-93: Ion channel r 92.3 6.1 0.00013 33.2 14.2 103 326-438 42-144 (156)
279 TIGR00769 AAA ADP/ATP carrier 91.8 14 0.0003 37.4 17.2 41 403-443 149-189 (472)
280 PF00854 PTR2: POT family; In 90.5 1.3 2.9E-05 43.3 8.7 114 353-467 3-120 (372)
281 COG3202 ATP/ADP translocase [E 90.3 21 0.00046 35.8 23.7 111 91-201 64-208 (509)
282 PRK03612 spermidine synthase; 89.1 9.2 0.0002 39.3 13.7 45 417-461 143-188 (521)
283 PF01733 Nucleoside_tran: Nucl 88.4 0.11 2.5E-06 49.4 -0.6 106 93-198 187-305 (309)
284 PF01733 Nucleoside_tran: Nucl 87.8 0.13 2.7E-06 49.1 -0.7 34 402-435 267-300 (309)
285 KOG1479 Nucleoside transporter 87.0 8.8 0.00019 37.6 11.2 106 91-197 285-399 (406)
286 PF06779 DUF1228: Protein of u 85.9 7.8 0.00017 28.6 8.0 58 312-369 15-75 (85)
287 KOG3880 Predicted small molecu 80.1 4 8.6E-05 38.2 5.4 77 125-201 326-402 (409)
288 KOG3097 Predicted membrane pro 80.0 10 0.00022 36.0 8.0 71 100-171 70-140 (390)
289 KOG0637 Sucrose transporter an 79.6 1.3 2.8E-05 43.6 2.3 67 90-158 336-402 (498)
290 KOG1237 H+/oligopeptide sympor 75.4 1.1E+02 0.0024 32.0 15.8 133 332-464 84-239 (571)
291 KOG3574 Acetyl-CoA transporter 73.6 43 0.00094 32.7 10.4 18 339-356 81-103 (510)
292 PF01770 Folate_carrier: Reduc 69.9 1.2E+02 0.0026 30.1 14.1 90 340-439 60-149 (412)
293 KOG3626 Organic anion transpor 66.9 1.1E+02 0.0023 32.9 12.7 154 323-477 134-349 (735)
294 PF06912 DUF1275: Protein of u 60.2 75 0.0016 28.1 9.1 34 94-127 52-88 (209)
295 PF03137 OATP: Organic Anion T 59.9 3 6.6E-05 43.0 0.1 116 320-435 37-193 (539)
296 PF03219 TLC: TLC ATP/ADP tran 59.9 2.1E+02 0.0045 29.3 13.3 43 402-444 163-205 (491)
297 KOG4332 Predicted sugar transp 59.1 68 0.0015 29.7 8.3 49 430-478 178-228 (454)
298 PF04281 Tom22: Mitochondrial 56.3 22 0.00048 28.9 4.4 25 408-432 60-84 (137)
299 PF02990 EMP70: Endomembrane p 56.1 1E+02 0.0022 31.9 10.3 72 278-350 251-326 (521)
300 PF07672 MFS_Mycoplasma: Mycop 52.5 49 0.0011 30.3 6.5 99 93-192 146-254 (267)
301 COG4262 Predicted spermidine s 49.5 1.6E+02 0.0035 28.5 9.4 94 74-168 30-132 (508)
302 TIGR00986 3a0801s05tom22 mitoc 46.1 40 0.00086 27.5 4.3 23 408-430 58-80 (145)
303 COG1268 BioY Uncharacterized c 44.7 67 0.0015 27.8 5.8 22 96-117 90-111 (184)
304 COG5336 Uncharacterized protei 43.6 67 0.0014 24.8 4.9 29 96-124 50-79 (116)
305 TIGR02230 ATPase_gene1 F0F1-AT 41.6 1.2E+02 0.0025 23.3 6.0 32 332-363 54-85 (100)
306 COG3619 Predicted membrane pro 41.3 2.7E+02 0.0058 25.1 12.0 31 87-117 54-84 (226)
307 COG5336 Uncharacterized protei 38.8 1.8E+02 0.004 22.5 7.2 34 413-446 36-69 (116)
308 PF13000 Acatn: Acetyl-coenzym 37.8 2.8E+02 0.0062 28.3 9.6 23 451-473 202-224 (544)
309 PF02632 BioY: BioY family; I 34.1 1.2E+02 0.0025 25.3 5.5 24 96-119 61-84 (148)
310 PF11298 DUF3099: Protein of u 31.2 1.5E+02 0.0033 21.2 4.9 31 111-141 10-40 (73)
311 PF11511 RhodobacterPufX: Intr 27.1 1.9E+02 0.0041 20.2 4.5 31 447-477 29-59 (67)
312 COG4769 Predicted membrane pro 24.6 84 0.0018 26.4 3.0 46 102-153 87-132 (181)
313 PF11947 DUF3464: Protein of u 24.5 3.7E+02 0.008 22.5 6.8 50 139-191 95-144 (153)
314 PRK14229 camphor resistance pr 24.3 2.6E+02 0.0057 21.7 5.7 25 148-172 56-80 (108)
315 KOG3880 Predicted small molecu 23.9 1.9E+02 0.0041 27.6 5.4 61 100-162 74-136 (409)
316 PF11151 DUF2929: Protein of u 21.9 2.6E+02 0.0057 18.8 5.3 45 186-231 11-55 (57)
317 PRK10263 DNA translocase FtsK; 21.0 9.6E+02 0.021 28.0 11.0 18 332-349 63-80 (1355)
318 TIGR02230 ATPase_gene1 F0F1-AT 20.8 3.6E+02 0.0079 20.7 5.6 20 110-129 65-84 (100)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.8e-51 Score=396.55 Aligned_cols=436 Identities=34% Similarity=0.578 Sum_probs=363.8
Q ss_pred HHHHHHHHHHHhhhhccceeeccchhhh--------hhhcCC--CCc--hhHHHHHHHHHHHHHHHHHHhhhhhhhcchh
Q 011275 50 FPHVLVATLSSFLFGYHLGVVNEPLESI--------SLDLGF--NGN--TLAEGLVVSMCLGGAFIGSTLSGWIADGVGR 117 (489)
Q Consensus 50 ~~~~~~~~l~~~~~~~~~~~~~~~~~~i--------~~~~~~--~~~--~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GR 117 (489)
....+.++++++-.||+.+.+|+..+.+ .+.++. +++ +..++.+++.+.+|.++|+++.++++||+||
T Consensus 10 ~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GR 89 (485)
T KOG0569|consen 10 LLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGR 89 (485)
T ss_pred HHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3345566777788999999999986444 344442 332 2346789999999999999999999999999
Q ss_pred hHHHHHhHHHHHHHHHHHHh---cchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHH
Q 011275 118 RRAFQLCALPMIIGASISAT---TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL 194 (489)
Q Consensus 118 r~~~~~~~~~~~i~~~l~~~---~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~ 194 (489)
|..+..+.++..+++++..+ .++++.++++|++.|+..|......+.|+.|..|++.||....+.+++..+|.+++.
T Consensus 90 K~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~ 169 (485)
T KOG0569|consen 90 KNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQ 169 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHH
Confidence 99999999998888777654 578999999999999999999999999999999999999999999999999999998
Q ss_pred Hhhccc-ccCCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHh-cCCHHHHHHHHHHHhCCCchhHHHHHHHhh---cc
Q 011275 195 LIGIPV-KEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYK-KGRTAEAEAEFEKLLGGSHVKSSLAELSKL---DR 269 (489)
Q Consensus 195 ~~~~~~-~~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~ 269 (489)
+++..- ......|++.+....+++++.++...++||||||+.. ++|.+||++.++++++.++.++..++..+. ++
T Consensus 170 ~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~ 249 (485)
T KOG0569|consen 170 VLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEE 249 (485)
T ss_pred HHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhc
Confidence 887652 2222337899998899999999999999999999997 899999999999999987655555443322 22
Q ss_pred CCCCcchhHHHhhhccchhH-HHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcc---hHHHHHHHHHHHHHHHHHHHH
Q 011275 270 GDDGDIVKFEELLYGRHFRV-VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLM 345 (489)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~ 345 (489)
.++.+..++.+++++++.|. ..+...+...+++.+.+.+.+|...+++..|++.. .++...++.+++.++++.+++
T Consensus 250 ~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~li 329 (485)
T KOG0569|consen 250 LEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLI 329 (485)
T ss_pred cccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22235677889999877665 45566778889999999999999999999998754 577888999999999999999
Q ss_pred hhcCCchhHHHhhHHHHHHHHHHHHHhhccC-CCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHH
Q 011275 346 DKLGRKALLQWSFFSMAVSMAIQVAASSSYI-PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVC 424 (489)
Q Consensus 346 dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 424 (489)
||+|||++++.+..++.+....+........ ...+..+..+...+.|.+.|++|.+|+++.+.+|++|++.|++++++.
T Consensus 330 d~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~ 409 (485)
T KOG0569|consen 330 DRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVA 409 (485)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHH
Confidence 9999999999988877777655432221111 114455677788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHhhc
Q 011275 425 MSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQEIEIALL 486 (489)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~e~~~~~~ 486 (489)
..++|+..++.++.++++.+.+|. ..|..+.+.+++..+++++++||||||+.+||.++++
T Consensus 410 ~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~ 470 (485)
T KOG0569|consen 410 TAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELE 470 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHH
Confidence 999999999999999999999997 8888999999999999999999999999999988765
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=4.2e-45 Score=372.70 Aligned_cols=438 Identities=33% Similarity=0.594 Sum_probs=356.2
Q ss_pred HHHHHHHHHHHhhhhcc--ceeeccchhhhhhhcCCCC---ch--hHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHH
Q 011275 50 FPHVLVATLSSFLFGYH--LGVVNEPLESISLDLGFNG---NT--LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ 122 (489)
Q Consensus 50 ~~~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~~~~~~---~~--~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~ 122 (489)
........++.+.++++ .+...+....+.++...+. ++ .+.+|+.+.+.+|..+|+++.|+++|++|||+.++
T Consensus 44 ~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~ 123 (513)
T KOG0254|consen 44 ILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLL 123 (513)
T ss_pred HHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 44556778888899987 5667777766666433221 11 24489999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhccccc
Q 011275 123 LCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (489)
Q Consensus 123 ~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~ 202 (489)
.+.+.+.+|++++++++|+.+++++|+++|+|.|+...+.+.|++|..|++.||...+..+....+|.+.+.+++.....
T Consensus 124 ~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~ 203 (513)
T KOG0254|consen 124 LAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK 203 (513)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877766543
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhC--CCchhHHHHHHHhh--ccCC-CCcchh
Q 011275 203 IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLG--GSHVKSSLAELSKL--DRGD-DGDIVK 277 (489)
Q Consensus 203 ~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~--~~~~-~~~~~~ 277 (489)
...+||.++++..+++++..+..++.||||+|+..+++.+++++.++++.+ +.+.....++++.. .+.. ......
T Consensus 204 ~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (513)
T KOG0254|consen 204 VYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKAS 283 (513)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccccccc
Confidence 212489999999999999888888899999999999999999999999988 33444433333311 0110 111113
Q ss_pred HHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCc--chHHHHHHHHHHHHHHHHHHHHhhcCCchhHH
Q 011275 278 FEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS--GLANVFVGIANLLGSVVAMVLMDKLGRKALLQ 355 (489)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~ 355 (489)
+.+++..+..+....+..+..++++++.+...+|.+.+++..+.+. ....+..++.++++.+++..+.||+|||++++
T Consensus 284 ~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll 363 (513)
T KOG0254|consen 284 WGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLL 363 (513)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 5556665566677778889999999999999999999999988775 45667788899999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHhhccC----CCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHH
Q 011275 356 WSFFSMAVSMAIQVAASSSYI----PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVI 431 (489)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~ 431 (489)
.+...+.++++++........ ......++.+...+++...++.+.+|++|.+.+|++|.+.|+++.+++..++++.
T Consensus 364 ~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 364 FGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred HhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 999988888877654432211 1223456667778888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH-HHHhhcccCCCCCHHHHHHhhcC
Q 011275 432 NFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVA-FVKRNVVETKGKSLQEIEIALLP 487 (489)
Q Consensus 432 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~pet~~~~~~e~~~~~~~ 487 (489)
+++....++.+....+....|..++.++.+... +.+.++|||||++++|+++.++.
T Consensus 444 ~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 444 NFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHc
Confidence 999988777776665545667777777777766 88899999999999999988654
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.3e-43 Score=361.76 Aligned_cols=427 Identities=19% Similarity=0.270 Sum_probs=297.8
Q ss_pred HHHHHHHHHHHhhhhccceeeccchhhhhhhc-C--CCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHH
Q 011275 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDL-G--FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (489)
Q Consensus 50 ~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~-~--~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~ 126 (489)
.....+++++.+.++||.+.++...|.+..++ + ...++.+.+++.+.+.+|+.+|+++.|+++||+|||+++..+.+
T Consensus 15 ~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~ 94 (502)
T TIGR00887 15 FRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELI 94 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 44566778888999999999998888876643 1 12233455789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcch------HHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhccc
Q 011275 127 PMIIGASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (489)
Q Consensus 127 ~~~i~~~l~~~~~~------~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~ 200 (489)
++.+++++++++.+ +..++++|+++|++.|...+....+++|++|+++||+.+++.+....+|.++++.++..+
T Consensus 95 ~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~ 174 (502)
T TIGR00887 95 IMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIV 174 (502)
T ss_pred HHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988876 788999999999999999999999999999999999999999999999988777665432
Q ss_pred cc---------------------C-CchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHH-HHHHHHHHHhCCCch
Q 011275 201 KE---------------------I-AGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTA-EAEAEFEKLLGGSHV 257 (489)
Q Consensus 201 ~~---------------------~-~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~-~~~~~l~~~~~~~~~ 257 (489)
.. . ...||++|.+..++.++..+..+++||||+|+..++|.+ ++++.+++..+.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~ 254 (502)
T TIGR00887 175 LAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIE 254 (502)
T ss_pred HHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccc
Confidence 10 0 112899999988888888888889999999998887764 455556655432111
Q ss_pred hHHHHHHHhhccCCCCcchhHHHhhhcc---chhHHHHH-HHHHHHHhhhhHHHHHHhHHHHHHhcCCCcc---h-----
Q 011275 258 KSSLAELSKLDRGDDGDIVKFEELLYGR---HFRVVFIG-STLFALQQLSGINAIFYFSSSVFKSAGLSSG---L----- 325 (489)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----- 325 (489)
+ ..++.++.+++++....+++++++++ +.++..+. ...+....+ ..+....+.|.+++..|++.. .
T Consensus 255 ~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~ 332 (502)
T TIGR00887 255 A-EPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDI-AFYGVNLNQKVILSAIGYSPPAATNNAYEE 332 (502)
T ss_pred c-CcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-HHHccccccHHHHHHHcCCCCccchhHHHH
Confidence 1 01111111111111112466666532 11122221 111221111 122233345666666665422 0
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhc
Q 011275 326 -------ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFAL 398 (489)
Q Consensus 326 -------~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (489)
......++.+++.+++++++||+|||+++..+..+.+++..++....... . ..... ...+.+...+..
T Consensus 333 ~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~-~--~~~~~--~~~~~~~~~~~~ 407 (502)
T TIGR00887 333 LYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL-S--THGFL--AIYVLAQFFANF 407 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc-c--hhHHH--HHHHHHHHHHhc
Confidence 12333456777889999999999999998777766666554443322111 1 11111 111222233456
Q ss_pred CccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------hCCchhHHHHHHHHHHHHHHHHh
Q 011275 399 GAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ----------LGPQLLYSIFGTFCLMAVAFVKR 468 (489)
Q Consensus 399 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~ 468 (489)
+.+++.+.+.+|++|++.|+++.|+.+.++++++++++.+++.+.+. .+....|.+++++++++.++. +
T Consensus 408 ~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~-~ 486 (502)
T TIGR00887 408 GPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT-L 486 (502)
T ss_pred CCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh-e
Confidence 67788888999999999999999999999999999999998888763 233456777887777765543 6
Q ss_pred hcccCCCCCHHHHHHh
Q 011275 469 NVVETKGKSLQEIEIA 484 (489)
Q Consensus 469 ~~pet~~~~~~e~~~~ 484 (489)
++|||||+++||+|++
T Consensus 487 ~lpEt~~~~leei~~~ 502 (502)
T TIGR00887 487 LIPETKGKSLEELSGE 502 (502)
T ss_pred EeccCCCCCHHhhhCC
Confidence 7899999999999864
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.6e-42 Score=351.24 Aligned_cols=429 Identities=31% Similarity=0.527 Sum_probs=313.7
Q ss_pred HHHHHHHHHHHhhhhccceeeccchhhhhhhcC------CCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHH
Q 011275 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLG------FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (489)
Q Consensus 50 ~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~ 123 (489)
...+++++++.+.++|+.+.+++..|.+.+++. .+.+..+.+++.+.+.+|..++++++|+++||+|||+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~ 90 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKI 90 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 445677788899999999999999999988872 12334567899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhc------------chHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHH
Q 011275 124 CALPMIIGASISATT------------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLM 191 (489)
Q Consensus 124 ~~~~~~i~~~l~~~~------------~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~ 191 (489)
+.++++++.++++++ .++..++++|+++|++.|+..+....+++|++|+++||+++++.+.+..+|..
T Consensus 91 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~ 170 (479)
T PRK10077 91 AAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL 170 (479)
T ss_pred HHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH
Confidence 999999998888763 23567889999999999999999999999999999999999999999999988
Q ss_pred HHHHhhcccc--------cCCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHH
Q 011275 192 GSLLIGIPVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAE 263 (489)
Q Consensus 192 ~~~~~~~~~~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 263 (489)
++++++..+. +..+ ||+.|++..++.++..+..+++||+|+|+..+++.+++++..++..+.+..+...++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (479)
T PRK10077 171 VVYFVNYFIARSGDASWLNTDG-WRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQE 249 (479)
T ss_pred HHHHHHHHHhccCcccccccCC-hHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHH
Confidence 8777654321 2234 899999887777776666778999999988888888777666665544332222222
Q ss_pred HHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcc---hHHHHHHHHHHHHHHH
Q 011275 264 LSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVV 340 (489)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~g~~~ 340 (489)
..+..+.+.. +....+. ..............+++..+.+...++.+.+++..+.+.. ......++.++++.++
T Consensus 250 ~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 325 (479)
T PRK10077 250 IKHSLDHGRK---TGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVL 325 (479)
T ss_pred HHHHHHHhhh---hhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 2111100000 0001110 0111112222223334444555666777877777766533 4455677888999999
Q ss_pred HHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhH
Q 011275 341 AMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKA 420 (489)
Q Consensus 341 ~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 420 (489)
+++++||+|||+++..+.....++.+.+....... . .....+..++.+...+..+.+|+.+.+++|++|++.|+++
T Consensus 326 ~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 401 (479)
T PRK10077 326 AIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ--A--PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKA 401 (479)
T ss_pred HHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC--c--ccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHH
Confidence 99999999999999888877777665544322111 1 1112222344455556556678888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH------HHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHhhcC
Q 011275 421 MAVCMSVHWVINFFVGLLFLRLL------EQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQEIEIALLP 487 (489)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~e~~~~~~~ 487 (489)
+|+.+.++++++.+++.+++.+. +..++...|.++++++++++++.+...||||+++++|+|++++.
T Consensus 402 ~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 474 (479)
T PRK10077 402 LAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEP 474 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhh
Confidence 99999999999999887776543 35667777888888888887777778999999999999988764
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=5e-42 Score=355.21 Aligned_cols=416 Identities=19% Similarity=0.218 Sum_probs=300.8
Q ss_pred HHHHHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHH
Q 011275 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (489)
Q Consensus 49 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~ 128 (489)
.+..+++++++.+.++++...++..+|.+.++++++.+ +.+++.+.+.+|.++|++++|+++||+|||++++++.+++
T Consensus 165 ~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~--~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 165 QWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDS--GKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34455667777888899998899999999999988644 5688999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCC----
Q 011275 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA---- 204 (489)
Q Consensus 129 ~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~---- 204 (489)
++++++++++++++.++++|++.|++.|+..++...+++|++|+++||+..+++..+..+|.++++.++..+....
T Consensus 243 ~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~ 322 (742)
T TIGR01299 243 GFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSF 322 (742)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 9999999999999999999999999999999999999999999999999999999999999887776543322111
Q ss_pred --------chhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchh-----HH--HHHHHhhcc
Q 011275 205 --------GWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVK-----SS--LAELSKLDR 269 (489)
Q Consensus 205 --------~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~-----~~--~~~~~~~~~ 269 (489)
..||+++++.+++.++.++..+++||||+|+..++|.+++.+.++++.+.+... .. ..+++..+.
T Consensus 323 ~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~ 402 (742)
T TIGR01299 323 QMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQ 402 (742)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhh
Confidence 128999999888888888888889999999999999999999999886543210 00 011111000
Q ss_pred -------CCCCc-----------------chhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhc------
Q 011275 270 -------GDDGD-----------------IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA------ 319 (489)
Q Consensus 270 -------~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 319 (489)
++... ...+.+++.++..+..+..+.++....+ +++.+..|.|.+++..
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~-~yygl~~w~P~~~~~~~~~~~~ 481 (742)
T TIGR01299 403 EDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSF-GYYGLSVWFPDMIKHLQADDYA 481 (742)
T ss_pred hhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0124556665555555554444433333 4455555656543220
Q ss_pred ------------------------------------CC------------------------------------------
Q 011275 320 ------------------------------------GL------------------------------------------ 321 (489)
Q Consensus 320 ------------------------------------~~------------------------------------------ 321 (489)
++
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~ 561 (742)
T TIGR01299 482 ALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDF 561 (742)
T ss_pred hhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccch
Confidence 00
Q ss_pred ----------------------------------CcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHH
Q 011275 322 ----------------------------------SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 367 (489)
Q Consensus 322 ----------------------------------~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 367 (489)
......+...++.++|.+++++++||+|||+++..+.++.++++++
T Consensus 562 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll 641 (742)
T TIGR01299 562 EEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFF 641 (742)
T ss_pred hhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 0012244556888999999999999999999988877777766655
Q ss_pred HHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011275 368 QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 447 (489)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 447 (489)
...... .. . + +...+++.. +..+..+..+.+++|++|++.|++++|++++.++++++++|.+.+.+.+. +
T Consensus 642 ~~~~~s-----~~-~-l-l~~~~l~g~-~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~ 711 (742)
T TIGR01299 642 LSFGNS-----ES-A-M-IALLCLFGG-LSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-T 711 (742)
T ss_pred HHHHcc-----HH-H-H-HHHHHHHHH-HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence 443211 11 1 1 111112221 12233456677899999999999999999999999999999888776653 3
Q ss_pred CchhHHHHHHHHHHHHHHHHhhcccCCCCCH
Q 011275 448 PQLLYSIFGTFCLMAVAFVKRNVVETKGKSL 478 (489)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~ 478 (489)
...++.+++++.+++.++.+ .+|||+++.+
T Consensus 712 ~~~pf~i~a~~lll~~ll~~-~LPET~~~~l 741 (742)
T TIGR01299 712 KAAPILFASAALACGGLLAL-KLPDTRGQVL 741 (742)
T ss_pred hHHHHHHHHHHHHHHHHHHH-hCCCCccccc
Confidence 44566666666666555443 5799999864
No 6
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=2.6e-48 Score=392.24 Aligned_cols=430 Identities=33% Similarity=0.575 Sum_probs=326.6
Q ss_pred HHHHHhhhhccceeeccchhhhhh--hcCCCC-------chhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHH
Q 011275 56 ATLSSFLFGYHLGVVNEPLESISL--DLGFNG-------NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (489)
Q Consensus 56 ~~l~~~~~~~~~~~~~~~~~~i~~--~~~~~~-------~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~ 126 (489)
+.++.+.++||...++...+.... +...+. ++.+.++..+...+|..+|+++.|+++||+|||+++..+.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 455668899998877666554441 222221 12346789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcc---hHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccC
Q 011275 127 PMIIGASISATTR---NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (489)
Q Consensus 127 ~~~i~~~l~~~~~---~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~ 203 (489)
+..+++++.++++ |++.+.++|+++|++.|+..+....|+.|..|+++||+..++.+.+..+|.+++...+......
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 9999999999999999999999999999999999999999999999999988888876655332
Q ss_pred Cc--hhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHh
Q 011275 204 AG--WWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEEL 281 (489)
Q Consensus 204 ~~--~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (489)
.+ .||+.+++..++.++..+...++||||+|+..++|.+|+++.+++.++.+..+++.++..+..+++...+..+.++
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 244 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDL 244 (451)
T ss_pred cccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeec
Confidence 22 3899999988888887778889999999999999999999998886655433333322222222221112445666
Q ss_pred hhccc-hhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcc-hHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhH
Q 011275 282 LYGRH-FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG-LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 359 (489)
Q Consensus 282 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~ 359 (489)
++++. .+.......+...+.+.+.+...+|.+..++..+.+.. .......+..+++.+++.++.||+|||+++..+..
T Consensus 245 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~ 324 (451)
T PF00083_consen 245 FRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLL 324 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 66544 34444444455555566666667777777777766655 45566677788888888999999999998888777
Q ss_pred HHHHHHHHHHHHhhccCCCc-hhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHH
Q 011275 360 SMAVSMAIQVAASSSYIPGS-ASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLL 438 (489)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~ 438 (489)
.+.++...+........... ......+...+.+...+..+.+++.+.+.+|++|++.|+++.+++..++++++++.+.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~ 404 (451)
T PF00083_consen 325 LMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFL 404 (451)
T ss_pred cccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 66666554430000011110 11122223344455667778899999999999999999999999999999999999988
Q ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHhh
Q 011275 439 FLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQEIEIAL 485 (489)
Q Consensus 439 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~e~~~~~ 485 (489)
.+.+.+..+....+.++++++++..++.+.++|||||++++|+|++|
T Consensus 405 ~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 405 FPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred cccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 88777777756777888888888888889999999999999999875
No 7
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=2.5e-38 Score=321.72 Aligned_cols=430 Identities=32% Similarity=0.611 Sum_probs=309.1
Q ss_pred HHHHHHHHHHHhhhhccceeeccchhhhhhhcCCC------CchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHH
Q 011275 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFN------GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (489)
Q Consensus 50 ~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~ 123 (489)
....+.+.++.++.+++...++...+.+..+++++ .++.+.+++.+.+.+++.++++++|+++||+|||+++..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~ 106 (481)
T TIGR00879 27 ALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLI 106 (481)
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHH
Confidence 34455666677888999999999999999888877 456678999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhc---chHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhh---
Q 011275 124 CALPMIIGASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG--- 197 (489)
Q Consensus 124 ~~~~~~i~~~l~~~~---~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~--- 197 (489)
+.+++.++.++++.. .+++.++++|+++|++.|...+....+++|++|+++|++++++++.+..+|..++++++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~ 186 (481)
T TIGR00879 107 IALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGK 186 (481)
T ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998554 34558999999999999999999999999999999999999999999999999999988
Q ss_pred cccccCCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHH-H---HHHh-hccCCC
Q 011275 198 IPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSL-A---ELSK-LDRGDD 272 (489)
Q Consensus 198 ~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~-~---~~~~-~~~~~~ 272 (489)
.......+ ||+.|++..+..++..+..+++||+|+++..+++.++.++..++....+...... . .... .+.+..
T Consensus 187 ~~~~~~~~-w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (481)
T TIGR00879 187 VSLNNTLG-WRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKR 265 (481)
T ss_pred hcCCCCcc-HHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 54444444 7999998777666666677789999998777766666555444433221111110 0 0000 000000
Q ss_pred CcchhHHHhhhcc--chhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhh
Q 011275 273 GDIVKFEELLYGR--HFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDK 347 (489)
Q Consensus 273 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr 347 (489)
.....+.+.++.. ..+..+....+..+......+...++.+...+..+.+. +.......++.+++.+++++++||
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 345 (481)
T TIGR00879 266 SVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDR 345 (481)
T ss_pred hccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011122333221 12233333333333333333444566666666666655 455666778889999999999999
Q ss_pred cCCchhHHHhhHHHHHHHHHHHHHhhccCCCc--hhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHH
Q 011275 348 LGRKALLQWSFFSMAVSMAIQVAASSSYIPGS--ASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCM 425 (489)
Q Consensus 348 ~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 425 (489)
+|||+.+..+..+..++............... ......+...+++...+..+..+....+..|.+|++.|++++|+.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 425 (481)
T TIGR00879 346 FGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAV 425 (481)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHH
Confidence 99999888776666655544432111111110 0012222333444555666677888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCCHHH
Q 011275 426 SVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQE 480 (489)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~e 480 (489)
...++++++++.+.+.+.+..++...|.+++++++++.+......||+|+++++|
T Consensus 426 ~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 426 AANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChhh
Confidence 9999999999999888888888888888888888888887778899999998765
No 8
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2e-37 Score=317.30 Aligned_cols=390 Identities=23% Similarity=0.312 Sum_probs=281.5
Q ss_pred cchhhhhhhcCCCC-chhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHH
Q 011275 72 EPLESISLDLGFNG-NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (489)
Q Consensus 72 ~~~~~i~~~~~~~~-~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l 150 (489)
...|.+.+|++++. ++.+.++..+.+.+|+.+|+++.|+++||+|||+++..+.++.+++++++++++|++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 45678899999862 24556899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcccC
Q 011275 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAE 230 (489)
Q Consensus 151 ~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~pE 230 (489)
.|++.+...+....++.|++|+++|++..+++..+..+|.+++++++..+.+ ||+.|++..++.++..+..+++||
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~~~~~e 265 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLSWFVPE 265 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999888888765532 899999887887777777788999
Q ss_pred ChHHHHhcCCHHHHHHHHHHHhCCCchh--HHHHHHH-hhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHH
Q 011275 231 SPHWLYKKGRTAEAEAEFEKLLGGSHVK--SSLAELS-KLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINA 307 (489)
Q Consensus 231 sp~~l~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (489)
||+|+..+++.+++++.+++..+.+... ....+.. +.+..++.++..+.++++++.++...+......+.. .
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~ 340 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTT-----A 340 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHH-----H
Confidence 9999999999998888777654332111 1110000 001111112245677887777666554333222211 1
Q ss_pred HHHhH-HHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHH
Q 011275 308 IFYFS-SSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSV 386 (489)
Q Consensus 308 ~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (489)
..++. ....+..+.+........++..+++.++.+++.||+|||+.+..+.+..+++.++...... .... ..+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~-----~~~~-~~~ 414 (505)
T TIGR00898 341 FSYYGLVLDLGNLGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPV-----DLYF-LRT 414 (505)
T ss_pred HHHHHHhccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCC-----CchH-HHH
Confidence 11221 1222233344455666777888999999999999999999988877766666554433211 1111 111
Q ss_pred HHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Q 011275 387 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
...++... ...+..+..+.+.+|++|++.|++++|+.+.++++++.++|.+.. .+..+....+.+++++.+++.+..
T Consensus 415 ~~~~~~~~-~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~--~~~~~~~~~~~~~~~~~~~~~~~~ 491 (505)
T TIGR00898 415 ALAVLGKF-GITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY--LGEKWLFLPLVLFGGLALLAGILT 491 (505)
T ss_pred HHHHHHHH-HHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH--HHHHHHhhHHHHHHHHHHHHHHHH
Confidence 11111111 111223455678999999999999999999999999999998876 344455566777777766665544
Q ss_pred HhhcccCCCCCHHH
Q 011275 467 KRNVVETKGKSLQE 480 (489)
Q Consensus 467 ~~~~pet~~~~~~e 480 (489)
..+|||++++++|
T Consensus 492 -~~lpet~~~~l~~ 504 (505)
T TIGR00898 492 -LFLPETKGVPLPE 504 (505)
T ss_pred -HcCcCCCCCCCCC
Confidence 4689999998875
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4.5e-36 Score=305.15 Aligned_cols=396 Identities=19% Similarity=0.241 Sum_probs=258.0
Q ss_pred HHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhH---HHH-HHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHH
Q 011275 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLA---EGL-VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (489)
Q Consensus 52 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~-~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~ 127 (489)
..+...++.++++||..+++...|.+.++++.+.++.. ..+ +.+..++++.+|++++|+++||+|||+++..++++
T Consensus 17 ~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l 96 (490)
T PRK10642 17 AITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVI 96 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 34566788999999999999999999999875544321 112 24778899999999999999999999999999999
Q ss_pred HHHHHHHHHhcchHHH--------HHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcc
Q 011275 128 MIIGASISATTRNLIG--------MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (489)
Q Consensus 128 ~~i~~~l~~~~~~~~~--------l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~ 199 (489)
++++++++++++|++. ++++|+++|++.|+.++....+++|++|+++||+..++...+..+|..++..+...
T Consensus 97 ~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~ 176 (490)
T PRK10642 97 MSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVL 176 (490)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999875 78999999999999999999999999999999999999988888887666644322
Q ss_pred c----c----cCCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCC
Q 011275 200 V----K----EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGD 271 (489)
Q Consensus 200 ~----~----~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 271 (489)
+ . ...+ ||++|++..++.++.+++...+||||+|...+++.++.++ + ..+
T Consensus 177 ~~~~~~~~~~~~~g-WR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~--------~----------~~~--- 234 (490)
T PRK10642 177 ISTIVGEANFLDWG-WRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR--------E----------GLQ--- 234 (490)
T ss_pred HHHhcCHHHhcCcc-HHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc--------c----------ccc---
Confidence 1 1 1234 8999999876666656666789999987543221111000 0 000
Q ss_pred CCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHH-hcCCCc---chHHHHHHHHHHHHHHHHHHHHhh
Q 011275 272 DGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFK-SAGLSS---GLANVFVGIANLLGSVVAMVLMDK 347 (489)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr 347 (489)
+.+..++++++++ +.+............ ...++....|.+.+++ ..+.+. ........++.+++.++.|+++||
T Consensus 235 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 312 (490)
T PRK10642 235 DGPKVSFKEIATK-HWRSLLTCIGLVIAT-NVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDR 312 (490)
T ss_pred ccccCCHHHHHHH-hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011234445543 222222222121111 1222333345555553 345543 234455567788889999999999
Q ss_pred cCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHH
Q 011275 348 LGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSV 427 (489)
Q Consensus 348 ~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 427 (489)
+|||+.+..+.+...+.......... ...... + ..+.++..+....+.+ ....+.+|++|++.|+++.|+...+
T Consensus 313 ~grr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~-~~~~~~~g~~~~~~~g-~~~~~~~~~~p~~~Rg~~~g~~~~~ 386 (490)
T PRK10642 313 FGRRPFVILGSVALFVLAIPAFILIN---SNVIGL-I-FAGLLMLAVILNCFTG-VMASTLPAMFPTHIRYSALAAAFNI 386 (490)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHh---CCCHHH-H-HHHHHHHHHHHHHHHH-HHHHHHHHHCCCccchHHHHHHHHH
Confidence 99999877665433332222111111 111111 1 1112222222222222 2344678999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHHHHHhhcccCCCCCH
Q 011275 428 HWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVAFVKRNVVETKGKSL 478 (489)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~ 478 (489)
+++++.++|.+.+.+.+..+ +...+.+..++++++.+.. ..+|||+++.+
T Consensus 387 ~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~~pes~~~~~ 437 (490)
T PRK10642 387 SVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG-VTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HHhccccCCCC
Confidence 88888888988887776544 3333334444444444433 35699987654
No 10
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-38 Score=295.12 Aligned_cols=431 Identities=20% Similarity=0.300 Sum_probs=295.2
Q ss_pred cchHHHHHHHHHHHHhhhhccceeeccchhhhhhhcCC-C-----CchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhH
Q 011275 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGF-N-----GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR 119 (489)
Q Consensus 46 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~-~-----~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~ 119 (489)
|++ ...+.++..+-+.|+||+.+++...|-+...+.- + ...-..+.+-.+.++|.++||+++|+++||+|||+
T Consensus 37 w~~-fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~ 115 (538)
T KOG0252|consen 37 WKH-FKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKK 115 (538)
T ss_pred HHH-HHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Confidence 444 4567788888999999999988888776654421 1 11223467788889999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHhcch-------HHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHH
Q 011275 120 AFQLCALPMIIGASISATTRN-------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMG 192 (489)
Q Consensus 120 ~~~~~~~~~~i~~~l~~~~~~-------~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~ 192 (489)
++...++++++++++++++.. ..++.+.|++.|+|.|+.+|.+.+..+|....+.||...+.+...+.+|.+.
T Consensus 116 vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gila 195 (538)
T KOG0252|consen 116 VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILA 195 (538)
T ss_pred hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhh
Confidence 999999999999998887532 4567889999999999999999999999999999999988887777777666
Q ss_pred HHHhhccc--------cc------CCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhc-CCHHHHHHHHHHHhCCCch
Q 011275 193 SLLIGIPV--------KE------IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKK-GRTAEAEAEFEKLLGGSHV 257 (489)
Q Consensus 193 ~~~~~~~~--------~~------~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~-~~~~~~~~~l~~~~~~~~~ 257 (489)
|.+++..+ .. ..+-||..|.++.+|+++.+..++..|||++|-... ++.+++.++.+|....
T Consensus 196 G~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~--- 272 (538)
T KOG0252|consen 196 GGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSV--- 272 (538)
T ss_pred ccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhcccccccc---
Confidence 55554321 11 112399999999999999999999999999986322 3333333332222111
Q ss_pred hHHHHHHHh--hccCCCCcchh-HHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcch---------
Q 011275 258 KSSLAELSK--LDRGDDGDIVK-FEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGL--------- 325 (489)
Q Consensus 258 ~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 325 (489)
.+++-+. .+..++.+... +.+.+..++-+.++..+ ..++..=..++....+...+++..+...+.
T Consensus 273 --~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~-~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~v 349 (538)
T KOG0252|consen 273 --DIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTA-GTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKV 349 (538)
T ss_pred --ccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHH-HHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHH
Confidence 1111001 11111111112 33344333434333222 222211111222223445555544433221
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccc
Q 011275 326 ---ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGP 402 (489)
Q Consensus 326 ---~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (489)
..++...+.++|..++..++|+.|||.+.+.++.++.+..+.+...+.+.. .... .+. ...+..+....|.+.
T Consensus 350 A~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~-~~~G-f~v--~y~l~~ff~NFGPn~ 425 (538)
T KOG0252|consen 350 AEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLE-NTIG-FVV--LYSLTFFFGNFGPNA 425 (538)
T ss_pred HHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccccc-ccCc-eee--hHHHHHHHHhcCCCc
Confidence 122233444567777888999999999999999888887766654443221 1111 111 112223445666777
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----HhCCchhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011275 403 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE-----QLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKS 477 (489)
Q Consensus 403 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~ 477 (489)
.+..+.+|.||++.|+++.|++...+..++.++...+.++.+ ..+...++.+++.+++++.++. ..+||||||+
T Consensus 426 ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T-~l~pEtk~~~ 504 (538)
T KOG0252|consen 426 TTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFT-LLIPETKGKS 504 (538)
T ss_pred eeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhee-EEeecccccC
Confidence 788899999999999999999999999999999999998888 7788899999999999887765 4688999999
Q ss_pred HHHHHHhhcCC
Q 011275 478 LQEIEIALLPQ 488 (489)
Q Consensus 478 ~~e~~~~~~~~ 488 (489)
++|++++..++
T Consensus 505 leei~~e~~~~ 515 (538)
T KOG0252|consen 505 LEEISNEEESN 515 (538)
T ss_pred HHHhcChhhcc
Confidence 99998765543
No 11
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=4.7e-35 Score=265.50 Aligned_cols=387 Identities=21% Similarity=0.282 Sum_probs=277.6
Q ss_pred hhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhh
Q 011275 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (489)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~ 153 (489)
.|......+. +..+..+++...+.|..+|+..+|.++|++|||+.+..+.+...+...+.+.++|+.++.+.|.+.|+
T Consensus 101 ~~~l~~~w~~--s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~ 178 (528)
T KOG0253|consen 101 LPALDEVWGP--SEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGF 178 (528)
T ss_pred HHHHHhhhch--hhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhc
Confidence 3445555553 45667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcccCChH
Q 011275 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPH 233 (489)
Q Consensus 154 g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~ 233 (489)
|.|+ .|...++-.|.-|...|+..+-.. ..+.+|......+........| |||.......|..++..+.+++|||||
T Consensus 179 g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g-wr~~l~~~~~pl~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 179 GVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG-WRYLLFTSSTPLMFAARFLVWVYESPR 255 (528)
T ss_pred cCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHhHHHHHHHHHhhcccCcc
Confidence 9999 777777789999999999888777 8888998887777665555556 688887777888888888999999999
Q ss_pred HHHhcCCHHHHHHHHHHHhCCCchh------------HHHHHHHhhcc---C-CCCcchhHHHhhhccchhHHHHHHHHH
Q 011275 234 WLYKKGRTAEAEAEFEKLLGGSHVK------------SSLAELSKLDR---G-DDGDIVKFEELLYGRHFRVVFIGSTLF 297 (489)
Q Consensus 234 ~l~~~~~~~~~~~~l~~~~~~~~~~------------~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (489)
|+..+++++++.+.++++...|..+ +..+|-...++ + .+....+...++.....|..+.....+
T Consensus 256 f~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iw 335 (528)
T KOG0253|consen 256 FYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIW 335 (528)
T ss_pred hhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHH
Confidence 9999999999998888875543221 11111111111 0 011223445555433333333333333
Q ss_pred HHHhhhhHHHHHHhHHHHHHhcCC------------------------CcchHHHHHHHHHHHHHHHHHHHHhhcCCchh
Q 011275 298 ALQQLSGINAIFYFSSSVFKSAGL------------------------SSGLANVFVGIANLLGSVVAMVLMDKLGRKAL 353 (489)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~ 353 (489)
....+..+. ........++ .|. ....-.++..+..++|.++.++++||+|||+.
T Consensus 336 fgnafsyyg-~VLlttelfq-sgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkT 413 (528)
T KOG0253|consen 336 FGNAFSYYG-SVLLTTELFQ-SGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKT 413 (528)
T ss_pred HhhHHHHHH-HHHHHHHHHh-ccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH
Confidence 222222211 1111122222 111 01123467788999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHH
Q 011275 354 LQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINF 433 (489)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~ 433 (489)
+...++.++++.+++...... .... .+.+..-.|..+...+.++|.+|+||+..|+++.|.+++++++++.
T Consensus 414 Mal~l~~f~iflfll~~c~~r---n~~t------vllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI 484 (528)
T KOG0253|consen 414 MALSLILFGIFLFLLTTCKTR---NAYT------VLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGI 484 (528)
T ss_pred HHHHHHHHHHHHHHHHHhcCc---chhH------HHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhh
Confidence 988888777776665443221 1111 1222223344455667899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCCH
Q 011275 434 FVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSL 478 (489)
Q Consensus 434 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~ 478 (489)
+.|++. +........+..+++++++++.+...++--|||||++
T Consensus 485 ~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 485 FSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred hhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 999876 3233344566778888888888877777889999975
No 12
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=7.3e-34 Score=284.71 Aligned_cols=382 Identities=19% Similarity=0.187 Sum_probs=239.8
Q ss_pred HHHHHHHHHhhhhccceeeccchhhhhhhcCCC-CchhHHHHHHHH---HHHHHHHHHHhhhhhhhcchhhHHHHHhHHH
Q 011275 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFN-GNTLAEGLVVSM---CLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (489)
Q Consensus 52 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~s~---~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~ 127 (489)
.+...+++.+++.+|...++...|.+.+|++.+ .++.+.+...+. .+++..+|++++|+++||+|||+++..+.++
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 102 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCM 102 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 345566788899999988898999999998632 223333333444 4445559999999999999999999999999
Q ss_pred HHHHHHHHHhcchHH--------HHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcc
Q 011275 128 MIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (489)
Q Consensus 128 ~~i~~~l~~~~~~~~--------~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~ 199 (489)
++++++++++++++. .+++.|+++|++.|+.++....+++|++|+++||++.++.+.+...|.+++++++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~ 182 (432)
T PRK10406 103 MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVV 182 (432)
T ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999875 588999999999999999999999999999999999999888888887777665433
Q ss_pred cc--------cCCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCC
Q 011275 200 VK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGD 271 (489)
Q Consensus 200 ~~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 271 (489)
+. ...+ ||++|++..++.++..+.....||+|++.. ++ .+ +
T Consensus 183 ~~~~~~~~~~~~~g-Wr~~F~i~~~~~ll~~~~~~~~~e~~~~~~--------~~--------------------~~--~ 231 (432)
T PRK10406 183 LQQTLEDAELREWG-WRIPFALGAVLAVVALWLRRQLDETSQQET--------RA--------------------LK--E 231 (432)
T ss_pred HHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHhcCCCCchHHH--------hh--------------------hc--c
Confidence 22 1234 899999887777776666666788764310 00 00 0
Q ss_pred CCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHH-HhcCCCcc---hHHHHHHHHHHHHHHHHHHHHhh
Q 011275 272 DGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAMVLMDK 347 (489)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr 347 (489)
..++++++++++.+.......+ .... ..+....|.+.++ +..+.+.. .......++..++..+.|+++||
T Consensus 232 ---~~~~~~l~~~~~~~~~~~~~~~--~~~~-~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr 305 (432)
T PRK10406 232 ---AGSLKGLWRNRRAFIMVLGFTA--AGSL-CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK 305 (432)
T ss_pred ---cccHHHHHhhHHHHHHHHHHHH--HHHH-HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0123445544433332222111 1111 1222333445444 34555532 33344455667777888999999
Q ss_pred cCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHH
Q 011275 348 LGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSV 427 (489)
Q Consensus 348 ~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 427 (489)
++||+.+........+........... .......+.+.....+...+. .+..+.+.+|.+|++.|++++|+++.+
T Consensus 306 ~grr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 306 IGRRTSMLCFGSLAALFTVPILSALQN--VSSPYAAFGLVMCALLIVSFY---TSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 999987765544333322222111111 111111111111111111111 123456789999999999999999998
Q ss_pred HHHH-HHHHHHHHHHHHHHhCC-chhHHHHHHHHHHHHHHHHhhcccCCCCCH
Q 011275 428 HWVI-NFFVGLLFLRLLEQLGP-QLLYSIFGTFCLMAVAFVKRNVVETKGKSL 478 (489)
Q Consensus 428 ~~~~-~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~pet~~~~~ 478 (489)
+++. +...|.+.. +.+..|. ...+.+.+++++++.+..+ ..|++||+.
T Consensus 381 g~~~~g~~~p~~~~-~l~~~g~~~~~~~~~~~~~~i~~~~~~--~l~~~~~~~ 430 (432)
T PRK10406 381 ANALFGGSAEYVAL-SLKSIGMETAFFWYVTLMAVVAFLVSL--MLHRKGKGM 430 (432)
T ss_pred HHHHHHhHHHHHHH-HHHHhCCCcHHHHHHHHHHHHHHHHHH--Hhhhccccc
Confidence 8863 444555444 4455553 3344444445555444433 245667764
No 13
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2.9e-32 Score=273.24 Aligned_cols=384 Identities=18% Similarity=0.151 Sum_probs=240.9
Q ss_pred HHHHHHHHHhhhhccceeeccchhh-hhhhc--CCCCchhHHHHHH-----HHHHHHHHHHHHhhhhhhhcchhhHHHHH
Q 011275 52 HVLVATLSSFLFGYHLGVVNEPLES-ISLDL--GFNGNTLAEGLVV-----SMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (489)
Q Consensus 52 ~~~~~~l~~~~~~~~~~~~~~~~~~-i~~~~--~~~~~~~~~~~~~-----s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~ 123 (489)
......++.+++.||...++...|. +.+++ +.+.. .++.. +..+++..+|+++.|+++||+|||+++..
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~ 99 (438)
T PRK09952 23 AALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA---MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLML 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH---HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHH
Confidence 4556677888999999887776664 44444 34432 24433 34456677999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcchHH--------HHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHH
Q 011275 124 CALPMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLL 195 (489)
Q Consensus 124 ~~~~~~i~~~l~~~~~~~~--------~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~ 195 (489)
+.++++++++++++++|+. .++++|+++|++.|+.++....+++|++|+++||+.++..+.+..+|.+++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~ 179 (438)
T PRK09952 100 TVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTG 179 (438)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 48889999999999999999999999999999999999999999999877765
Q ss_pred hhcccc--------cCCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhh
Q 011275 196 IGIPVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKL 267 (489)
Q Consensus 196 ~~~~~~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 267 (489)
+...+. ...+ ||++|++..++.++........||+|+|...+++.++.
T Consensus 180 ~~~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~----------------------- 235 (438)
T PRK09952 180 LVSLISMMTTDEQFLSWG-WRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA----------------------- 235 (438)
T ss_pred HHHHHHHhCCHHHhhccC-hHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc-----------------------
Confidence 443322 1234 89999988777666555556689998764322110000
Q ss_pred ccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHH-HhcCCCcc---hHHHHHHHHHHHHHHHHHH
Q 011275 268 DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSSG---LANVFVGIANLLGSVVAMV 343 (489)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~i~~~~g~~~~g~ 343 (489)
++ +....+.+.++++.+..... ......+ ..+....+.+... +..+.+.. ......++..+++.++.|+
T Consensus 236 -~~---~~~~~~~l~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~ 308 (438)
T PRK09952 236 -KK---RIPVIEALLRHPGAFLKIIA--LRLCELL-TMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAW 308 (438)
T ss_pred -cc---cCCHHHHHHHchHHHHHHHH--HHHHHHH-HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00001112222322222111 1111111 1122222333322 33444433 2233445667788889999
Q ss_pred HHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHH
Q 011275 344 LMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAV 423 (489)
Q Consensus 344 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 423 (489)
++||+|||+.+..+.+...++.......... .+. ....+...++..+.... ..+..+.+.+|.+|++.|+++.++
T Consensus 309 l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~l~~~~~~~-~~~~~~~~~~e~~p~~~r~tg~g~ 383 (438)
T PRK09952 309 LADRFGRRRVYITGALIGTLSAFPFFMALEA--QSI--FWIVFFSIMLANIAHDM-VVCVQQPMFTEMFGASYRYSGAGV 383 (438)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHc--CCh--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCcchhHHHHhH
Confidence 9999999998776655444333222211111 111 11111111221222211 123456688999999999999999
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhC--CchhHHHHHHHHHHHHHHHHhhcccCCC
Q 011275 424 CMSVHW-VINFFVGLLFLRLLEQLG--PQLLYSIFGTFCLMAVAFVKRNVVETKG 475 (489)
Q Consensus 424 ~~~~~~-~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~pet~~ 475 (489)
.+.+++ +++.++|.+...+.+..+ +...+...+++++++.+.. ..++||++
T Consensus 384 ~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~-~~~~~~~~ 437 (438)
T PRK09952 384 GYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA-LLMKDNQR 437 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH-HHcccccc
Confidence 888766 788889988888877543 4445555555555554443 34577653
No 14
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=8.8e-32 Score=276.20 Aligned_cols=379 Identities=23% Similarity=0.250 Sum_probs=264.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchh
Q 011275 87 TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYV 166 (489)
Q Consensus 87 ~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i 166 (489)
.....+..+.+++|..+|++++|+++||+|||++++.++++..++.++.++++|++.+++.|+++|++.++...+...++
T Consensus 117 ~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 117 STLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 44457889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHH
Q 011275 167 TEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEA 246 (489)
Q Consensus 167 ~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~ 246 (489)
+|+.++++|+.+.++....+..|.++.+..+... . + ||+.+++..++.++.++.+++.||||||+..++|.+++.+
T Consensus 197 ~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~-~--~-Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~ 272 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYIT-R--D-WRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIK 272 (521)
T ss_pred eeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHH-h--h-HHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHH
Confidence 9999999999999994444444444444444333 2 3 8999999888888887777777899999999999999999
Q ss_pred HHHHHhCCC----chhHHHHHH---HhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhH-HHHHHh
Q 011275 247 EFEKLLGGS----HVKSSLAEL---SKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFS-SSVFKS 318 (489)
Q Consensus 247 ~l~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 318 (489)
.+++..+.+ ...+...+. +........+...+.++++.+.++.......+.++ .....|+. ......
T Consensus 273 ~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~-----~~~~~y~gl~~~~~~ 347 (521)
T KOG0255|consen 273 ILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWF-----VFSLVYYGLSLNVSG 347 (521)
T ss_pred HHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHH-----HHhHHHHhhhhhhhh
Confidence 888875432 111111111 11111111122446677776544433332222221 11122222 122233
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhc
Q 011275 319 AGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFAL 398 (489)
Q Consensus 319 ~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (489)
.+.+........+....++....+...|++|||.....+.....++.+........... .....+...+......++
T Consensus 348 lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 424 (521)
T KOG0255|consen 348 LGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGG-WLHWILPLLGKFFIGSAF-- 424 (521)
T ss_pred cCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHH--
Confidence 44445566667777888888899999999999999888877777776665544322110 012222222222222222
Q ss_pred CccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCCH
Q 011275 399 GAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSL 478 (489)
Q Consensus 399 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~ 478 (489)
. +.+.+.+|++|+..|+.+.+.++..+++++.++|.+.... ........+.+++....+........+|||+++.+
T Consensus 425 --~-~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l 500 (521)
T KOG0255|consen 425 --N-LIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLL-RQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPL 500 (521)
T ss_pred --H-HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCC
Confidence 2 3367899999999999999999999999999999765333 22333444444566666666666678999999999
Q ss_pred HHH
Q 011275 479 QEI 481 (489)
Q Consensus 479 ~e~ 481 (489)
+|-
T Consensus 501 ~~t 503 (521)
T KOG0255|consen 501 PGT 503 (521)
T ss_pred chh
Confidence 774
No 15
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-32 Score=256.50 Aligned_cols=364 Identities=21% Similarity=0.233 Sum_probs=269.0
Q ss_pred HHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHH
Q 011275 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (489)
Q Consensus 52 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~ 131 (489)
.++.+.++.|..+.+..+....+|++.+|+|++.. +.|+..+.|.+++.+++++...++||+.||++++..+.+++++
T Consensus 14 ~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~--~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEG--AAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 35677888888888888888899999999998755 5699999999999999999999999999999999999999999
Q ss_pred HHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHH
Q 011275 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (489)
Q Consensus 132 ~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f 211 (489)
++++++++||+.++++|++.|++.|..++....+..++.|+++|+++.++...+..++...|.++|.++.+..| ||..|
T Consensus 92 n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G-WR~~F 170 (394)
T COG2814 92 NLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG-WRATF 170 (394)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888 69999
Q ss_pred HHHHHHHHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHH
Q 011275 212 WVSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (489)
Q Consensus 212 ~~~~~~~~~~~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (489)
+.....+++..+. +..+| |+ ++.++ .+.+..+..+.++++..+..
T Consensus 171 ~~ia~l~ll~~~~~~~~lP--~~-----~~~~~---------------------------~~~~~~~~~~~l~~p~v~~~ 216 (394)
T COG2814 171 LAIAVLALLALLLLWKLLP--PS-----EISGS---------------------------LPGPLRTLLRLLRRPGVLLG 216 (394)
T ss_pred HHHHHHHHHHHHHHHHhCC--Cc-----cCCCC---------------------------CCcchhHHHHHhcCchHHHH
Confidence 9866665555443 45566 21 00000 00111123345555666655
Q ss_pred HHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHH
Q 011275 291 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 367 (489)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 367 (489)
.....+....++..+ .|..|...+..+++. ++..+.++++.++|+.++|++.|| +.|+.+......+.+....
T Consensus 217 l~~t~l~~~g~F~~f---tYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~ 292 (394)
T COG2814 217 LLATFLFMTGHFALY---TYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLA 292 (394)
T ss_pred HHHHHHHHcchhhhH---HhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHH
Confidence 554444443333322 233444445566654 467788999999999999999999 7777776665555555544
Q ss_pred HHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCC--chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 368 QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFP--SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ 445 (489)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (489)
+...... .+..+..+.+ .++. ..|....+..++.+ ++.+..+.++.....+++..++..+.+.++++
T Consensus 293 l~~~~~~-------~~~~~~~~~~--wg~a--~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~ 361 (394)
T COG2814 293 LTFTGAS-------PALALALLFL--WGFA--FSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA 361 (394)
T ss_pred HHHhcch-------HHHHHHHHHH--HHHH--hhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3332211 1122221222 2222 23333333333332 58899999999999999999999999999999
Q ss_pred hCCchhHHHHHHHHHHHHHHHH
Q 011275 446 LGPQLLYSIFGTFCLMAVAFVK 467 (489)
Q Consensus 446 ~g~~~~~~~~~~~~~~~~~~~~ 467 (489)
.|+.....+.+...+++..+..
T Consensus 362 ~g~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 362 LGYAATGWVGAALLLLALLLAL 383 (394)
T ss_pred hchHHHHHHHHHHHHHHHHHHH
Confidence 8887777777777666665543
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=7.8e-32 Score=270.10 Aligned_cols=390 Identities=18% Similarity=0.256 Sum_probs=263.7
Q ss_pred HHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHH
Q 011275 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (489)
Q Consensus 52 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~ 131 (489)
....+.++.+.++++.....+..|.+.+|+|.+.+ +.++..+.+.+++.+++++.|+++||+|||+++..+.++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~--~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 96 (426)
T PRK12307 19 ALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDM--EGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVG 96 (426)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 34566677777888888888899999999998754 5688999999999999999999999999999999999999999
Q ss_pred HHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHH
Q 011275 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (489)
Q Consensus 132 ~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f 211 (489)
.++++++++++.++++|+++|++.|..++....++.|++|+++|+++.+++..+..+|.++++.+...+.+..+ ||+.|
T Consensus 97 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~-w~~~f 175 (426)
T PRK12307 97 TGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYG-WRAAF 175 (426)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCC-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888877666655555 79999
Q ss_pred HHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHH
Q 011275 212 WVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (489)
Q Consensus 212 ~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (489)
++..++.++.++.....||++++...+.+.+ .+.. +.........+++.++++.++...
T Consensus 176 ~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-----------~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 234 (426)
T PRK12307 176 FVGLLPVLLVIYIRARAPESKEWEEAKLSGK-----------GKHS----------QSAWSVFSLSMKGLFNRAQFPLTL 234 (426)
T ss_pred HHHHHHHHHHHHHHHHCCCChHHHHhhhhcc-----------cccc----------ccchhhhhHHHHHHHhhchHHHHH
Confidence 8865554444444444577755421110000 0000 000000112345566666555433
Q ss_pred HHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHH
Q 011275 292 IGSTLFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (489)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 368 (489)
........ .+........+.+..++..+.+. +.......++.+++.++.+++.||+|||+.+..+.....+.....
T Consensus 235 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 313 (426)
T PRK12307 235 CVFIVLFS-IFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPL 313 (426)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 32222111 11111122334444555556543 334455678889999999999999999998777665544433322
Q ss_pred HHHhhccCCCchhhHHHHHHHHHHHHHH-hcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011275 369 VAASSSYIPGSASLYLSVGGMLMFVLTF-ALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 447 (489)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 447 (489)
.... ...... + ..+.+...+ ..+..+....+..|.+|++.|++++|+...+.++++.++|.+.+.+.+..|
T Consensus 314 ~~~~-----~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 314 FRIP-----QDNYLL--L-GACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG 385 (426)
T ss_pred HHHc-----cccHHH--H-HHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence 2111 111111 1 112222222 223334445577899999999999999999999999999998888887777
Q ss_pred Cch-hHHHHHHHHHHHHHHHHhhcccCC
Q 011275 448 PQL-LYSIFGTFCLMAVAFVKRNVVETK 474 (489)
Q Consensus 448 ~~~-~~~~~~~~~~~~~~~~~~~~pet~ 474 (489)
... .+.+.+..+...........||+.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (426)
T PRK12307 386 LGAALTFIVAFWTATILLIIGLSIPDRL 413 (426)
T ss_pred HHHHHHHHHHHHHHHHHhhccccCChhh
Confidence 543 233334344444444444566653
No 17
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=5.5e-32 Score=271.18 Aligned_cols=397 Identities=14% Similarity=0.089 Sum_probs=259.1
Q ss_pred HHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHH
Q 011275 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (489)
Q Consensus 54 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~ 133 (489)
....++.+...++...++..+|.+.+++|.+.+ +.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~--~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~ 103 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAMPEMLADLGLSRS--DIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINI 103 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHH--HHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHH
Confidence 344455555556666677889999999988744 568999999999999999999999999999999999999999999
Q ss_pred HHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHH
Q 011275 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (489)
Q Consensus 134 l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~ 213 (489)
+.+.++|++.+++.|++.|++.|...+....++.|++|+++|++.+++++.+..+|..++++++..+.+..+ ||+.|++
T Consensus 104 ~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-w~~~f~~ 182 (434)
T PRK11663 104 LFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG-WRYGMMI 182 (434)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-HHHHHHH
Confidence 999999999999999999999998888889999999999999999999999999998888887776666566 7999988
Q ss_pred HHHHHHHH-HHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHH-HhhhccchhHHH
Q 011275 214 SIVPAAIL-CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFE-ELLYGRHFRVVF 291 (489)
Q Consensus 214 ~~~~~~~~-~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 291 (489)
.++..++. ++..++++|+|++...+...++.++. + +..+ +.+..+.+....++ ..++++..+...
T Consensus 183 ~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~---------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (434)
T PRK11663 183 AGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDA-L---------ELAQ---QQEGAGLSRKEILTKYVLLNPYIWLLS 249 (434)
T ss_pred HHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccc-c---------ccch---hccccCCChhhhHHHHHhcChHHHHHH
Confidence 66554433 33445678887642111100000000 0 0000 00000000000011 123334333332
Q ss_pred HHHHHHHHHhhhhHHHHHHhHHHHH-HhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhc--CCchhH-HHhhHHHHHH
Q 011275 292 IGSTLFALQQLSGINAIFYFSSSVF-KSAGLSS---GLANVFVGIANLLGSVVAMVLMDKL--GRKALL-QWSFFSMAVS 364 (489)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~--grr~~~-~~~~~~~~~~ 364 (489)
....+.. ........+.+.++ +..+.+. +.......++..++.++.|+++||+ ++|+.. ........+.
T Consensus 250 ~~~~~~~----~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~ 325 (434)
T PRK11663 250 FSYVLVY----VVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLS 325 (434)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHH
Confidence 2221111 11222333444444 3345543 3455667788999999999999998 333322 2211122211
Q ss_pred HHHHHHHhhccCCCchhhHHHHHHHHHHHHHH-hcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 365 MAIQVAASSSYIPGSASLYLSVGGMLMFVLTF-ALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL 443 (489)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (489)
........ .... .... . +.+..++ ..+.......+.+|.+|++.|+++.|+.+..+++++.++|.+.+.+.
T Consensus 326 ~~~~~~~~----~~~~-~~~~-~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~ 397 (434)
T PRK11663 326 VGSLWLMP----FASY-VMQA-A--CFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVL 397 (434)
T ss_pred HHHHHHcc----cccH-HHHH-H--HHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHH
Confidence 11111111 1111 1111 1 1111111 11112223446789999999999999999999999999999999999
Q ss_pred HHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCCH
Q 011275 444 EQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSL 478 (489)
Q Consensus 444 ~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~ 478 (489)
+..|+...|.+.+++++++.+..+...+++++++-
T Consensus 398 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (434)
T PRK11663 398 EIWHWTGFFVVISIAAGISALLLLPFLNAQAPREA 432 (434)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHHhhhchhcc
Confidence 98998888888888888877766666777666543
No 18
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.8e-30 Score=260.37 Aligned_cols=388 Identities=20% Similarity=0.266 Sum_probs=240.8
Q ss_pred HHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHH--H---HHHHHHHHHhhhhhhhcchhhHHHHHhHH
Q 011275 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSM--C---LGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (489)
Q Consensus 52 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~--~---~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~ 126 (489)
.....+++.+++.+|...++...|.+.+|++.+..+.. .+..+. + .++..+|+++.|+++||+|||+++..+.+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 94 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFA-SLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLS 94 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchH-HHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHH
Confidence 35567788899999999999999999999987755432 233222 2 22334789999999999999999999999
Q ss_pred HHHHHHHHHHhcchHHH--------HHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhc
Q 011275 127 PMIIGASISATTRNLIG--------MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (489)
Q Consensus 127 ~~~i~~~l~~~~~~~~~--------l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~ 198 (489)
++++++++++++++++. ++++|+++|++.|...+....+++|++|+++|++.+++......+|..+++.++.
T Consensus 95 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~ 174 (434)
T PRK15075 95 IMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGY 174 (434)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999874 6889999999999999888899999999999999999988887777666666554
Q ss_pred ccc--------cCCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccC
Q 011275 199 PVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRG 270 (489)
Q Consensus 199 ~~~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 270 (489)
.+. +..+ ||++|++..+...+..+.....||++.+...+++ .
T Consensus 175 ~l~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~-----------------------------~ 224 (434)
T PRK15075 175 LLNQWLSPAQMAEWG-WRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHR-----------------------------P 224 (434)
T ss_pred HHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhc-----------------------------c
Confidence 431 2334 8999987654433332223334454322100000 0
Q ss_pred CCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHh-cCCCc---chHHHHHHHHHHHHHHHHHHHHh
Q 011275 271 DDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS-AGLSS---GLANVFVGIANLLGSVVAMVLMD 346 (489)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~i~~~~g~~~~g~l~d 346 (489)
+ ....+++..+++ +........... .....+...+|.|.++++ .+.+. +.......++.+++.++.|+++|
T Consensus 225 ~--~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~D 299 (434)
T PRK15075 225 S--MREIFRSLAANW--RIVLAGMLMVAM-TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSD 299 (434)
T ss_pred c--cccHHHHHHHhH--HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000011111111 111111111111 222233445556666554 46543 34455677888899999999999
Q ss_pred hcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHH
Q 011275 347 KLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMS 426 (489)
Q Consensus 347 r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 426 (489)
|+|||+....+.....+........... ....... . ....+....++. ..+....+.+|.+|++.|+++.++...
T Consensus 300 r~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~-~~~~~~~~~~g~-~~~~~~~~~~e~~p~~~rg~~~g~~~~ 374 (434)
T PRK15075 300 RIGRRPVLIAFTVLAILTAYPALSWLVA--APSFARM-L-AVELWLSFLYGS-YNGAMVVALTEVMPAEVRTAGFSLAYS 374 (434)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHc--CCchHHH-H-HHHHHHHHHHHH-HHhhHHHHHHHHCCCCccchheeHHHH
Confidence 9999998766543332211111111111 1111111 1 111111122221 223344678999999999999999877
Q ss_pred HHHH-HHHHHHHHHHHHHHHhCCch---hHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHH
Q 011275 427 VHWV-INFFVGLLFLRLLEQLGPQL---LYSIFGTFCLMAVAFVKRNVVETKGKSLQEIEI 483 (489)
Q Consensus 427 ~~~~-~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~pet~~~~~~e~~~ 483 (489)
+++. ++.++|.+.+.+.+..|..+ .+.+.+.++..... ...++-+|..++..|.
T Consensus 375 ~~~~~~g~~~p~~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 432 (434)
T PRK15075 375 LATAIFGGFTPAISTWLIHVTGDKAAPGYWLSFAAVCGLIAT---LVLYRRRGARLQAAEA 432 (434)
T ss_pred HHHHHHhhhHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH---HHhccccchhhhhhhc
Confidence 7776 47788888888888877532 23333333333222 3455666766665553
No 19
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.3e-31 Score=266.34 Aligned_cols=385 Identities=15% Similarity=0.124 Sum_probs=249.4
Q ss_pred HHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHH
Q 011275 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (489)
Q Consensus 52 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~ 131 (489)
....+++..+++.+|...++...|.+.+|+|.+.+ +.++..+.+.+++.+++++.|+++||+|||+++..+.++++++
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~--~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 86 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSAT--MFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA 86 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHH--HHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH
Confidence 34455556666777877788888999999988744 5689999999999999999999999999999999999999999
Q ss_pred HHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhccccc------CCc
Q 011275 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE------IAG 205 (489)
Q Consensus 132 ~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~------~~~ 205 (489)
+.++++++|++.+++.|+++|++.|...+....++.|++|+++|++.+++++.+..+|..++++++..+.+ ..+
T Consensus 87 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~g 166 (412)
T TIGR02332 87 STATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKG 166 (412)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999999999988888899999999999999999999999998888888765532 234
Q ss_pred hhHHHHHHHHHHHHHHH-HHhhcccCChHHHHhcCCHHHHHHHHHH-HhCCCchhHHHHHHHhhccCCCCc-chhHHHhh
Q 011275 206 WWRICFWVSIVPAAILC-LAMVFCAESPHWLYKKGRTAEAEAEFEK-LLGGSHVKSSLAELSKLDRGDDGD-IVKFEELL 282 (489)
Q Consensus 206 ~wr~~f~~~~~~~~~~~-~~~~~~pEsp~~l~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 282 (489)
||+.|++.+++.++.. +.++++||+|+.. +.-.++.++..++ ..++... .++.++..+.+... ...+++++
T Consensus 167 -wr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T TIGR02332 167 -WQWLFLLEGFPSVILGVMTWFWLDDSPDKA--KWLDEEDKKALKEMIDNDQLT---LEQPEGAFAHAAMPQRSMLREIF 240 (412)
T ss_pred -hhHHHHHHHHHHHHHHHHHhhccCCCcccC--CCCCHHHHHHHHHHHHhcccc---ccccccccccccccHHHHHHHhc
Confidence 8999998766665543 4456789998420 0001111111111 1100000 00000000000000 11122222
Q ss_pred hccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhc--CCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhH-HH
Q 011275 283 YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA--GLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALL-QW 356 (489)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~-~~ 356 (489)
++.++... ..+.+ .......+..|.|.++++. +.+ .+.......++..+|.++.++++||++||+.. ..
T Consensus 241 -~~~~~~~~---~~~~~-~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~ 315 (412)
T TIGR02332 241 -TPAIMLYT---LAYFC-LTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTAL 315 (412)
T ss_pred -ChHHHHHH---HHHHH-HHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHH
Confidence 23332221 12221 2222334445666666653 332 34456677788999999999999999987743 33
Q ss_pred hhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHH
Q 011275 357 SFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVG 436 (489)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~ 436 (489)
......++. ++. .. ... .. ......+....+. ....+..+....|.+|++.|+++.|+.+..++++++++|
T Consensus 316 ~~~~~~~~~-~~~-~~---~~~-~~--~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p 386 (412)
T TIGR02332 316 PYLFAAAGW-LLA-SA---TDH-NL--IQLLGIIMASMGS-FSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSP 386 (412)
T ss_pred HHHHHHHHH-HHH-Hh---cCC-HH--HHHHHHHHHHHHh-hhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhh
Confidence 332222222 111 11 111 11 1111111111111 112233445567889999999999999999999999999
Q ss_pred HHHHHHHHHhC-CchhHHHHHHH
Q 011275 437 LLFLRLLEQLG-PQLLYSIFGTF 458 (489)
Q Consensus 437 ~~~~~~~~~~g-~~~~~~~~~~~ 458 (489)
.+.+.+.+..| +...+.+.+++
T Consensus 387 ~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 387 FLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhcccccccCCCCchhHHHHHHH
Confidence 98888888764 66666555443
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=2.3e-31 Score=259.35 Aligned_cols=348 Identities=14% Similarity=0.087 Sum_probs=229.7
Q ss_pred eeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHH
Q 011275 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (489)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R 148 (489)
.+++.+|.+.+|+|++.+ +.|++.+.+.+|+.+++++.|+++||+|||+++..+......+.......+|++.+++.|
T Consensus 9 ~~~~~lp~i~~~~~~s~~--~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R 86 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKE--ELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQ 86 (368)
T ss_pred HHHhhHHHHHHHhCcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 367788999999998744 568999999999999999999999999999987766555555443333447999999999
Q ss_pred HHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHH-HHHHHHhhc
Q 011275 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA-AILCLAMVF 227 (489)
Q Consensus 149 ~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~-~~~~~~~~~ 227 (489)
+++|++.+. .......++|++|+++|+++.++...+..+|..++++++..+.+..+ ||+.|++.+++. +...+.+++
T Consensus 87 ~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~~~~~~~~ 164 (368)
T TIGR00903 87 LLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAGIILVLAA 164 (368)
T ss_pred HHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHHHH
Confidence 999999986 44555667999999999999999999999999999999888776666 799998854444 344455667
Q ss_pred ccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHH
Q 011275 228 CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINA 307 (489)
Q Consensus 228 ~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (489)
+||+|++. ++..+.+ +. ..+++++++++.++.......+... ..+.
T Consensus 165 lp~~p~~~---~~~~~~~-----------------~~----------~~~~~~ll~~~~~~~~~~~~~~~~~----~~~~ 210 (368)
T TIGR00903 165 LPALPFQA---AEGFGFK-----------------DA----------VKEFGALAGRKDLWIIGAILGFGVA----LFDN 210 (368)
T ss_pred cCCCCCCC---CCCcchH-----------------HH----------HHHHHHHHcChhHHHHHHHHHHHHH----HHHH
Confidence 89998641 1100000 00 0124456666666555443333222 2334
Q ss_pred HHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCc---hhHHH-hhHHHHHHHHHHHHHhhccCCCchhhH
Q 011275 308 IFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRK---ALLQW-SFFSMAVSMAIQVAASSSYIPGSASLY 383 (489)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (489)
+..|.|.++++.+++.. ......+..+.+.+..++++||..|| +.... .....++...+. ... .+. .
T Consensus 211 ~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~--~~~---~~~---~ 281 (368)
T TIGR00903 211 LAIWLEAALRPAGLEDI-AGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLAL--AFE---LNR---L 281 (368)
T ss_pred HHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHH--HHc---ccc---H
Confidence 44567777766665432 33334455556666678889988654 22221 222222221111 111 111 1
Q ss_pred HHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Q 011275 384 LSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAV 463 (489)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 463 (489)
..+....+. ..+..+..+..+.+.+|++|++.|+++.|+.++.+++++..+|...+.+.. +....|.+++++++++.
T Consensus 282 ~~~~~~~l~-~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~ 358 (368)
T TIGR00903 282 ALFAFIGIA-GLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAF 358 (368)
T ss_pred HHHHHHHHH-HHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHH
Confidence 111111111 112222334566789999999999999999999999999999988776652 55567777777777776
Q ss_pred HHH
Q 011275 464 AFV 466 (489)
Q Consensus 464 ~~~ 466 (489)
+.+
T Consensus 359 ~~~ 361 (368)
T TIGR00903 359 AIA 361 (368)
T ss_pred HHH
Confidence 654
No 21
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=7.6e-31 Score=259.63 Aligned_cols=366 Identities=17% Similarity=0.170 Sum_probs=251.4
Q ss_pred HHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHH
Q 011275 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (489)
Q Consensus 53 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~ 132 (489)
...+.++.+....+.....+.+|.+.+|+|.+.+ +.++..+.+.+++.+++++.|+++||+|||+++..+.+++.+++
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~--~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 88 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTA--QVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASH 88 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Confidence 3444555555554444555668999999998754 56899999999999999999999999999999999999999999
Q ss_pred HHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHH
Q 011275 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (489)
Q Consensus 133 ~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~ 212 (489)
+++++++|++.++++|+++|++.+...+....++.|++|+++|+++.+++..+..+|..++++++..+.+..+ ||+.|+
T Consensus 89 ~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~ 167 (390)
T PRK03545 89 VLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG-WRTTFL 167 (390)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc-HHHHHH
Confidence 9999999999999999999999988888888999999999999999999999999999999988877666556 799998
Q ss_pred HHHHHHHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHH
Q 011275 213 VSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (489)
Q Consensus 213 ~~~~~~~~~~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (489)
+..+..++..+. ....||.|+ ++.++ .....+.++++.++...
T Consensus 168 ~~~~~~~l~~~~~~~~~~~~~~-----~~~~~-------------------------------~~~~~~~~~~~~~~~~~ 211 (390)
T PRK03545 168 AIGGGALITLLLLIKLLPLLPS-----EHSGS-------------------------------LKSLPLLFRRPALVSLY 211 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCCCC-----CCcch-------------------------------HHHHHHHHhCcHHHHHH
Confidence 876555544333 334565431 00000 00123344555544433
Q ss_pred HHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHH
Q 011275 292 IGSTLFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (489)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 368 (489)
....+.....+... .+..+...+..+.+. +......+++.+++.++.+++.||++||... .+.....++....
T Consensus 212 ~~~~~~~~~~~~~~---~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l 287 (390)
T PRK03545 212 LLTVVVVTAHFTAY---SYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLL 287 (390)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHH
Confidence 32222222111111 111222223344443 4455667788999999999999999988654 3333333322222
Q ss_pred HHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 011275 369 VAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP 448 (489)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 448 (489)
.... +. .+......++++... .+.++....+..|..| +.|++++|+.+...+++..+++.+.+.+.+..|.
T Consensus 288 ~~~~-----~~--~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~ 358 (390)
T PRK03545 288 LPAA-----NS--EWHLSVLSIFWGIAI-MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGL 358 (390)
T ss_pred HHHh-----ch--HHHHHHHHHHHHHHH-hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh
Confidence 1111 11 111111222222222 2234444556778777 6889999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhhc
Q 011275 449 QLLYSIFGTFCLMAVAFVKRNV 470 (489)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~ 470 (489)
...+.+.+++.+++.++.+...
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 359 SSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHc
Confidence 8888888888888777665544
No 22
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=2e-30 Score=256.39 Aligned_cols=374 Identities=13% Similarity=0.090 Sum_probs=250.1
Q ss_pred HHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHH
Q 011275 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (489)
Q Consensus 52 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~ 131 (489)
....++.+.++... ....++.+|.+.+|+|++.+ +.++..+.+.+++.+++++.|+++||+|||+++..+..+++++
T Consensus 11 ~~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~s~~--~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~ 87 (393)
T PRK09705 11 LLVLVLIGLNMRPL-LTSVGPLLPQLRQASGMSFS--VAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVG 87 (393)
T ss_pred HHHHHHHHHHcchh-hhccchhHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHH
Confidence 33444444443332 35578899999999998754 5689999999999999999999999999999999999999999
Q ss_pred HHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHH
Q 011275 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (489)
Q Consensus 132 ~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f 211 (489)
.+++++++|++.++++|+++|++.|...+....++.|++| ++|+++++.+..+..+|..+++.++..+.++...||+.+
T Consensus 88 ~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~ 166 (393)
T PRK09705 88 ALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTL 166 (393)
T ss_pred HHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 9999999999999999999999999999888899999997 789999999999888888888887766655542378876
Q ss_pred HHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHH
Q 011275 212 WVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (489)
Q Consensus 212 ~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (489)
....+..++..+..+...+ +++++.+ +++ . +..+.+++++.+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~-----------------------~~~-~---~~~~~l~~~~~~~l~ 211 (393)
T PRK09705 167 AWWALPAVVALFAWWWQSA--------REVASSH-----------------------KTT-T---TPVRVVFTPRAWTLG 211 (393)
T ss_pred HHHHHHHHHHHHHHHHHhc--------CCCcccc-----------------------CCC-c---CCcccccCHhHHHHH
Confidence 5543433333222221111 0000000 000 0 001122233333322
Q ss_pred HHHHHHHHHhhhhHHHHHHhHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHH
Q 011275 292 IGSTLFALQQLSGINAIFYFSSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (489)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 368 (489)
....+. . ........+.+.++.+.+.+ .+......+++.++|.++.+++.||++||+....+.....++..+.
T Consensus 212 ~~~~~~---~-~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~ 287 (393)
T PRK09705 212 VYFGLI---N-GGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGF 287 (393)
T ss_pred HHHHHH---H-HHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 222111 1 12223333444445555554 3456677889999999999999999999988777655554444332
Q ss_pred HHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccC-CchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011275 369 VAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIF-PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 447 (489)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 447 (489)
.... ... .... ..+...+.. +..|.......+.+ |++.|++..|+.+.++++++.++|.+.+.+.|..|
T Consensus 288 ~~~~-----~~~-~~~~---~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g 357 (393)
T PRK09705 288 IWLP-----LQL-PVLW---AMVCGLGLG-GAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG 357 (393)
T ss_pred HHcc-----chH-HHHH---HHHHHHhcc-chHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2111 111 1111 111112211 12233333445555 57889999999999999999999999999989877
Q ss_pred -CchhHHHHHHHHHHHHHHHHhhcccCCCCCH
Q 011275 448 -PQLLYSIFGTFCLMAVAFVKRNVVETKGKSL 478 (489)
Q Consensus 448 -~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~ 478 (489)
+...+.+.+++++...+......|||+++.+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 358 NYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 4556666666777776666778999988754
No 23
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1.8e-30 Score=258.28 Aligned_cols=379 Identities=20% Similarity=0.224 Sum_probs=251.3
Q ss_pred HHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHH
Q 011275 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (489)
Q Consensus 52 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~ 131 (489)
....+.++.+.++++....+...|.+.+++|.+.+ +.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~--~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 90 (405)
T TIGR00891 13 AFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTV--DAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG 90 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChh--hHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34566777788888888889999999999998755 5689999999999999999999999999999999999999999
Q ss_pred HHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCc-hhHHH
Q 011275 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-WWRIC 210 (489)
Q Consensus 132 ~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~wr~~ 210 (489)
+++++++++++.+++.|++.|++.+...+....++.|++|+++|+++.++...+..+|..+++.++..+.+..+ .||+.
T Consensus 91 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~ 170 (405)
T TIGR00891 91 TLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRAL 170 (405)
T ss_pred HHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888887766544333 37999
Q ss_pred HHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHH
Q 011275 211 FWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (489)
Q Consensus 211 f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (489)
|++..++.++..+.....||++++...+++.++.++..++..+.++... . +.+ ......++.. ++.+..
T Consensus 171 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~--~~~~~~~~~~--~~~~~~ 239 (405)
T TIGR00891 171 FFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIA------N-IVM--TLAAAMVQSA--GKRWPT 239 (405)
T ss_pred HHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhh------h-hhh--hhhHHhhhhh--hhhhHH
Confidence 9887766666666666789987654322221111111111111100000 0 000 0000011110 111111
Q ss_pred HH-HHHHHHHHhhhhHHHHHHhHHHHH-HhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHH
Q 011275 291 FI-GSTLFALQQLSGINAIFYFSSSVF-KSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSM 365 (489)
Q Consensus 291 ~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~ 365 (489)
+. .........+. ......+.+.++ +..+.+. +.......++.+++.++.+++.||+|||+.+..+.....+..
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 318 (405)
T TIGR00891 240 FVYLVVLVLFANLY-SHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLI 318 (405)
T ss_pred HHHHHHHHHHHHHH-HhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHH
Confidence 11 11111111111 111112223333 3345443 345566778899999999999999999998766654432222
Q ss_pred HHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 366 AIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ 445 (489)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (489)
...... .... .... ....+.. ....+..+....+..|.+|++.|+++.|+.+.+.++++.++|.+.+.+.+.
T Consensus 319 ~~~~~~-----~~~~-~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 319 IPVFAI-----GANV-AVLG-LGLFFQQ-MLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHHHHh-----CCch-HHHH-HHHHHHH-HHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 221111 1111 1111 1111111 122233445556789999999999999999999999999999999999888
Q ss_pred hC-CchhH
Q 011275 446 LG-PQLLY 452 (489)
Q Consensus 446 ~g-~~~~~ 452 (489)
.| +...+
T Consensus 391 ~g~~~~~~ 398 (405)
T TIGR00891 391 LDEYGTAL 398 (405)
T ss_pred ccccchhH
Confidence 77 44433
No 24
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.9e-30 Score=257.11 Aligned_cols=371 Identities=21% Similarity=0.264 Sum_probs=252.9
Q ss_pred HHHHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHH
Q 011275 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (489)
Q Consensus 50 ~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~ 129 (489)
+....+..+..++++++....+...|.+.+|+|.+. .+.+++.+.+.++..+++++.|+++||+|||+++..+.++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 91 (406)
T PRK11551 14 ALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDV--AQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFG 91 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 444566677788889998888889999999998864 456899999999999999999999999999999999999999
Q ss_pred HHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHH
Q 011275 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (489)
Q Consensus 130 i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~ 209 (489)
++.++++++++++.+++.|+++|++.+...+....++.|++|+++|++.+++++.+..+|..+++.++..+.+..+ ||+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~ 170 (406)
T PRK11551 92 LFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA-WRH 170 (406)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC-HHH
Confidence 9999999999999999999999999999988899999999999999999999999999998888888766655555 799
Q ss_pred HHHHHHHHHHH-HHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhc---c
Q 011275 210 CFWVSIVPAAI-LCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYG---R 285 (489)
Q Consensus 210 ~f~~~~~~~~~-~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 285 (489)
.|++..+..++ ..+...++||+|++...+++.++.++. .+..++. +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~ 220 (406)
T PRK11551 171 IFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPV------------------------------LRALFGEGRAT 220 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhh------------------------------HHHHhhhhhhh
Confidence 98875544333 333455679987653221111100000 0000110 1
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHH
Q 011275 286 HFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMA 362 (489)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 362 (489)
........... .....+....+.+.+.+..+.+ .+.......++..++.++.|++.||+|||+.+........
T Consensus 221 ~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 296 (406)
T PRK11551 221 ATLLLWISYFF----TLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGIL 296 (406)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 11111111111 1111222233445555555554 3455666778899999999999999999998766544444
Q ss_pred HHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 363 VSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRL 442 (489)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (489)
++....... .. ... +.+ ........ ..+..+....+..|.+|++.|+++.|+.+.+.+++++++|.+.+.+
T Consensus 297 ~~~~~~~~~-----~~-~~~-~~~-~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 367 (406)
T PRK11551 297 ASLAALAAA-----PS-FAG-MLL-AGFAAGLF-VVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQL 367 (406)
T ss_pred HHHHHHHhc-----Cc-HHH-HHH-HHHHHHHH-HHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhh
Confidence 433322111 11 111 111 11111111 1223445566889999999999999999999999999999998888
Q ss_pred HHHhCC-chhHHHHHHHHHHHHHHH
Q 011275 443 LEQLGP-QLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 443 ~~~~g~-~~~~~~~~~~~~~~~~~~ 466 (489)
.+..+. ...+.....+.+++.+..
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (406)
T PRK11551 368 LALGRSTVGVIGASIPVILVAALAA 392 (406)
T ss_pred hccCCchHHHHHHHHHHHHHHHHHH
Confidence 775443 233433444444443333
No 25
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.5e-31 Score=270.62 Aligned_cols=387 Identities=15% Similarity=0.125 Sum_probs=241.6
Q ss_pred HHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHH
Q 011275 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (489)
Q Consensus 55 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l 134 (489)
...++.++...+-..++...|.+.+|+|++.+ +.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++
T Consensus 33 ~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~--~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~ 110 (467)
T PRK09556 33 VVFIGYLTMYLIRKNFKAAQNDMISTYGLSTT--ELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLG 110 (467)
T ss_pred HHHHHHHHHHHHhcChhhhhHHHHHhcCCCHH--HHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHH
Confidence 33444344444666778889999999998744 5689999999999999999999999999999998888887777666
Q ss_pred HHh-----cchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccC--Cchh
Q 011275 135 SAT-----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI--AGWW 207 (489)
Q Consensus 135 ~~~-----~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~--~~~w 207 (489)
.+. ++|++.+++.|+++|++.|...+....+++|++|+++||++++++..+..+|..+++++...+... .++|
T Consensus 111 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~ 190 (467)
T PRK09556 111 FGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHV 190 (467)
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcc
Confidence 554 689999999999999999999999999999999999999999999999999988777765433221 2358
Q ss_pred HHHHHHHHHHHHHHHH-HhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhH-HHhhhcc
Q 011275 208 RICFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKF-EELLYGR 285 (489)
Q Consensus 208 r~~f~~~~~~~~~~~~-~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 285 (489)
|..|.+.++..++..+ .+++.+++|+.. +..++ ++..+ + ...+ ++ ...++++......+ +..++++
T Consensus 191 ~~~f~~~g~~~~~~~i~~~~~~~~~p~~~---~~~~~-~~~~~----~-~~~~--~~-~~~~~~~~~~~~~~~~~~l~~~ 258 (467)
T PRK09556 191 IGMFIFPSIIALIIGFIGLRYGSDSPEEL---GWGKA-EEIFG----E-PISE--ED-KETESTDMTKWQIFVEYVLKNP 258 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCCChhhc---CCCCh-hhccc----C-ccch--hh-hccccccCcHHHHHHHHHHcCh
Confidence 8888775554444433 344456666421 11111 10000 0 0000 00 00000000000111 2245555
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHhHHHHH-HhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHH
Q 011275 286 HFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 361 (489)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 361 (489)
.++.......+... .......+.|.++ +..|.+. +.......++..++.+++|+++||++||+.........
T Consensus 259 ~~~~~~~~~~~~~~----~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~ 334 (467)
T PRK09556 259 VIWLLCFANIFLYI----VRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALA 334 (467)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 55544332222111 1222334455444 3455553 34555667888999999999999999998765543333
Q ss_pred HHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHH-HHHHHHHHHH
Q 011275 362 AVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWV-INFFVGLLFL 440 (489)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-~~~~~~~~~~ 440 (489)
.+........ . .... .......+..+. ...+..........|.+|++.|+++.|+.+.++++ ++.++|.+.+
T Consensus 335 ~~~~~~~~~~-~---~~~~--~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G 407 (467)
T PRK09556 335 LIIFTLGVYQ-H---ATSE--YMYLASLFALGF-LVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLG 407 (467)
T ss_pred HHHHHHHHHH-h---cCcH--HHHHHHHHHHHH-HHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHH
Confidence 2222111111 1 1111 111111111111 11111112234567999999999999999999997 6688999988
Q ss_pred HHHH------------HhCCchhHHHHHHHHHHHHHHH
Q 011275 441 RLLE------------QLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 441 ~~~~------------~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
.+.+ ..++...|.+++++++++.+..
T Consensus 408 ~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 408 MIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred HHhcccccccccccccccChHHHHHHHHHHHHHHHHHH
Confidence 8888 4567777777766666654433
No 26
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=1.7e-30 Score=257.40 Aligned_cols=380 Identities=18% Similarity=0.170 Sum_probs=250.5
Q ss_pred ccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHH
Q 011275 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGM 144 (489)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l 144 (489)
.+...++...|.+.+++|.+.+ +.+++.+.+.++..+++++.|+++||+|||+++..+.++++++..++++++|++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~g~s~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
T TIGR00893 8 LDRANLSFAAPMLQEDLGLSAA--QYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSL 85 (399)
T ss_pred HHHHhhhHhHHHHHHhhCCChh--hHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHH
Confidence 3445567778889999988654 56899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHH
Q 011275 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (489)
Q Consensus 145 ~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 224 (489)
+++|++.|++.+...+....++.|++|+++|++..++......+|..+++.++..+.+..+ ||+.|+...+..++..+.
T Consensus 86 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 164 (399)
T TIGR00893 86 YILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLGIIWGVL 164 (399)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988888776655556 799998765555544433
Q ss_pred -hhcccCChHHHHhcCCHHHHHHH-HHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhh
Q 011275 225 -MVFCAESPHWLYKKGRTAEAEAE-FEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQL 302 (489)
Q Consensus 225 -~~~~pEsp~~l~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (489)
.+..||+|+. .+...++.++. .++.. .+. +.++.+.......++.+++++++.......+....
T Consensus 165 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 230 (399)
T TIGR00893 165 WLKFIPDPPQK--AKWLTEEEKYIVVGGLL---------AEQ-QGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIG-- 230 (399)
T ss_pred hhheecCCCCc--cccCCHHHHhhcchhhc---------ccc-ccccccCCCccchHHHhcCHHHHHHHHHHHHHHhH--
Confidence 3456666531 01111111100 00000 000 00111112223455566665555444333322221
Q ss_pred hhHHHHHHhHHHHH-HhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHH-hhHHHHHHHHHHHHHhhccCC
Q 011275 303 SGINAIFYFSSSVF-KSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQW-SFFSMAVSMAIQVAASSSYIP 377 (489)
Q Consensus 303 ~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~-~~~~~~~~~~~~~~~~~~~~~ 377 (489)
......+.+..+ +..+.+ .+.......++.+++.++.++++||++||+.... ......++........... .
T Consensus 231 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 307 (399)
T TIGR00893 231 --LGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFAT-N 307 (399)
T ss_pred --HHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh-c
Confidence 122222333333 223433 3556667778889999999999999999962111 1111111111111000000 0
Q ss_pred CchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHH
Q 011275 378 GSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFG 456 (489)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~ 456 (489)
.....+..+. ......+..+..+....+.+|.+|++.|+++.|+.+.+.++++.++|.+.+.+.+..| +...+.+.+
T Consensus 308 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~ 385 (399)
T TIGR00893 308 YVNIPYAALA--LVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVA 385 (399)
T ss_pred cchhHHHHHH--HHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHH
Confidence 0111111111 1111222333567778899999999999999999999999999999999988888877 777777777
Q ss_pred HHHHHHHHHH
Q 011275 457 TFCLMAVAFV 466 (489)
Q Consensus 457 ~~~~~~~~~~ 466 (489)
++++++.+..
T Consensus 386 ~~~~~~~~~~ 395 (399)
T TIGR00893 386 ALALIGALSY 395 (399)
T ss_pred HHHHHHHHHH
Confidence 7766665544
No 27
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.97 E-value=1.3e-29 Score=257.87 Aligned_cols=377 Identities=13% Similarity=0.059 Sum_probs=249.3
Q ss_pred HHHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHH
Q 011275 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (489)
Q Consensus 51 ~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i 130 (489)
..+..++++.++...|.++++.++|++.+|+|.+.+ +.+|+.+.|.+++.++++++|+++||+|||+++..+.+++.+
T Consensus 6 ~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~--~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~ 83 (495)
T PRK14995 6 LTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGN--ELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGL 83 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHh--HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 346677888899999999999999999999987655 457999999999999999999999999999999999999999
Q ss_pred HHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccC-CcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHH
Q 011275 131 GASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (489)
Q Consensus 131 ~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~-p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~ 209 (489)
+++++++++|++.++++|+++|+|.+...+.....+.+.+ |+++|+++.+++.....+|..+||+++..+.+..+ |||
T Consensus 84 ~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g-wr~ 162 (495)
T PRK14995 84 ASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY-WGS 162 (495)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hHH
Confidence 9999999999999999999999999988877766676665 78999999999999999999999999988887777 799
Q ss_pred HHHHHHHHHHHHH-HHhhcccCChHHHHhcCCHHHHHHH------------HHHHhCCC-chhHHH----------HHHH
Q 011275 210 CFWVSIVPAAILC-LAMVFCAESPHWLYKKGRTAEAEAE------------FEKLLGGS-HVKSSL----------AELS 265 (489)
Q Consensus 210 ~f~~~~~~~~~~~-~~~~~~pEsp~~l~~~~~~~~~~~~------------l~~~~~~~-~~~~~~----------~~~~ 265 (489)
.|++.....++.. +..+++||+|.. .+++.+..... ++...... ...... ....
T Consensus 163 ~f~i~~~~~~~~~~l~~~~l~~~~~~--~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 163 VFLINVPIVLVVMGLTARYVPRQAGR--RDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCC--CCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 9998755444433 334556776531 11111111100 00000000 000000 0000
Q ss_pred hhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHh-cCCC---cchHHHHHHHHHHHHHHHH
Q 011275 266 KLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS-AGLS---SGLANVFVGIANLLGSVVA 341 (489)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~i~~~~g~~~~ 341 (489)
..+.+ ..++..-.++++++.+.......+..... .....++.+..++. .+.+ .+....+..++..+++++.
T Consensus 241 ~~e~~-~~~p~~~~~lf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~ 315 (495)
T PRK14995 241 RTQLA-ASRPMIDMRLFTHRIILSGVVMAMTAMIT----LVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIA 315 (495)
T ss_pred HHHhc-CCCCCcCHHHhCCcccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111 11111123566666555443332222211 12222333333332 3443 4667778888999999999
Q ss_pred HHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHH
Q 011275 342 MVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAM 421 (489)
Q Consensus 342 g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 421 (489)
|++.||+|+|+.+..+.....++...+.... ...+ . +......++.+++.+... +.......+..|++.++.+.
T Consensus 316 g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~--~~~~-~--~~~~~~~~l~G~g~g~~~-~~~~~~~~~~~~~~~~g~~~ 389 (495)
T PRK14995 316 GILVSRLGLRLVATGGMALSALSFYGLAMTD--FSTQ-Q--WQAWGLMALLGFSAASAL-LASTSAIMAAAPPEKAAAAG 389 (495)
T ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHHhc--CCCc-h--HHHHHHHHHHHHhHHHHH-HHHHHHHHhcCCHHhcchHH
Confidence 9999999999987777666555544332221 1111 1 111112222233322222 22334566778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 011275 422 AVCMSVHWVINFFVGLLFLRLL 443 (489)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~ 443 (489)
++.+....+++.+++.+.+.++
T Consensus 390 ~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 390 AIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888877665554
No 28
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=7.1e-31 Score=244.87 Aligned_cols=379 Identities=16% Similarity=0.160 Sum_probs=254.5
Q ss_pred eeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHH
Q 011275 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLG 147 (489)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~ 147 (489)
.-++.+.|.+.+|.++| ..|.|++.+.+.+.|.++.++.|.++||.+.|..+..++++.++.+++.+++++...+.+.
T Consensus 46 knF~~a~p~l~e~~~ls--k~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l 123 (448)
T COG2271 46 KNFNLAMPALIEDGGLS--KTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVL 123 (448)
T ss_pred HhHhhccHHHHHhcCCC--HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 34677889999998876 4467999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhh--cccccCCchhHHHHHHHHHHHHHHHHH-
Q 011275 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG--IPVKEIAGWWRICFWVSIVPAAILCLA- 224 (489)
Q Consensus 148 R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~--~~~~~~~~~wr~~f~~~~~~~~~~~~~- 224 (489)
-+++|+.-|...|.+...++.|+|++|||+..++++.+.++|..+.+++. ..+..+. +||..|++.++.++++.++
T Consensus 124 ~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~-~w~~~f~~pgiiaiival~~ 202 (448)
T COG2271 124 WVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG-GWRAAFYFPGIIAIIVALIL 202 (448)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999966666555 4444433 4899999876666665444
Q ss_pred hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCC--CCcchhHHHhhhccchhHHHHHHHHHHHHhh
Q 011275 225 MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGD--DGDIVKFEELLYGRHFRVVFIGSTLFALQQL 302 (489)
Q Consensus 225 ~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (489)
++...++|+-. +-+ .+++..++.. +..++.++.+ ...+.-.+.+++++..|.+.++.+...+.-+
T Consensus 203 ~~~~rd~Pqs~---GLP-----~ie~~~~d~~-----e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~ 269 (448)
T COG2271 203 LFLLRDRPQSE---GLP-----PIEEYRGDPL-----EIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRY 269 (448)
T ss_pred HHHhCCCcccc---CCC-----CHHHhhcCch-----hhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 44566666421 111 0111111100 0000111111 1112234456677777766555444333222
Q ss_pred hhHHHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhc--CCchhHHHhhHHHHHHHHHHHHHhhccCCCch
Q 011275 303 SGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL--GRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 380 (489)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~--grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (489)
......+.|..+..+.+..+++......=++.++|+++.||++||+ |||.+....+......++...... +..
T Consensus 270 gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~----~~~- 344 (448)
T COG2271 270 GINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA----PNG- 344 (448)
T ss_pred HHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC----CCc-
Confidence 2223333333333222223345666777789999999999999996 777765444333332222222211 111
Q ss_pred hhHHHHHHHHHHHHHHhc-CccccccccccccCCchhhhhHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchhHHHHHHH
Q 011275 381 SLYLSVGGMLMFVLTFAL-GAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWV-INFFVGLLFLRLLEQLGPQLLYSIFGTF 458 (489)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 458 (489)
..++.. .+++.+++.. |..-+......|..|++..|++.|+...++++ |+..++...+.+.|..||...|.++.+.
T Consensus 345 ~~~l~~--~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~ 422 (448)
T COG2271 345 SYLLDA--ILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIA 422 (448)
T ss_pred cHHHHH--HHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHH
Confidence 111111 1222222221 22223445678999999999999999999999 7777777777777778998888888877
Q ss_pred HHHHHHHHHhh
Q 011275 459 CLMAVAFVKRN 469 (489)
Q Consensus 459 ~~~~~~~~~~~ 469 (489)
++++.+++...
T Consensus 423 a~l~~lll~~~ 433 (448)
T COG2271 423 ALLAILLLLPV 433 (448)
T ss_pred HHHHHHHHHHH
Confidence 77776555433
No 29
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=3.4e-29 Score=256.04 Aligned_cols=398 Identities=18% Similarity=0.221 Sum_probs=253.3
Q ss_pred HHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHH
Q 011275 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (489)
Q Consensus 52 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~ 131 (489)
....+.++.+++.++....++.+|.+.+++|.+.+ +.++..+.+.+++.+++++.|+++||+|||+++..+.++.+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 98 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTV--QAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVG 98 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 34556667777888888888889999999988744 5578899999999999999999999999999999999999999
Q ss_pred HHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHH
Q 011275 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (489)
Q Consensus 132 ~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f 211 (489)
.++.++++|++.+++.|++.|++.+...+....++.|++|+++|++..+++..+..+|..+++.++..+.+..+ ||+.|
T Consensus 99 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w~~~f 177 (496)
T PRK03893 99 TLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWG-WRALF 177 (496)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-HHHHH
Confidence 99999999999999999999999999988888999999999999999999999999999888888777666656 79999
Q ss_pred HHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHH--H-----HHH-hhccCCCCcchh------
Q 011275 212 WVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSL--A-----ELS-KLDRGDDGDIVK------ 277 (489)
Q Consensus 212 ~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~--~-----~~~-~~~~~~~~~~~~------ 277 (489)
++..++.++.++.....||++++...+++.++.++..+.....+...... . ... ............
T Consensus 178 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (496)
T PRK03893 178 FIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLL 257 (496)
T ss_pred HHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Confidence 88666555555555667888765332211111111111110000000000 0 000 000000000000
Q ss_pred ----HHHh-hh-ccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHH-hcCCCc---chHHHHHHHHHHHHHHHHHHHHhh
Q 011275 278 ----FEEL-LY-GRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFK-SAGLSS---GLANVFVGIANLLGSVVAMVLMDK 347 (489)
Q Consensus 278 ----~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr 347 (489)
+... .+ .+..+..........+..+........+.+.+++ ..+.+. +.......++..++.++.++++||
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr 337 (496)
T PRK03893 258 CAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDW 337 (496)
T ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 00 0000000000000000000000112233444443 445543 455667778899999999999999
Q ss_pred cCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHH
Q 011275 348 LGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSV 427 (489)
Q Consensus 348 ~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 427 (489)
+|||+.+..+.....+........ .... .+.. ...+........+..+....+..|.+|++.|++++|+...+
T Consensus 338 ~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 410 (496)
T PRK03893 338 LGTRKAYVCSLLISQLLIIPVFAI-----GGAN-VWVL-GLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNV 410 (496)
T ss_pred hcchHHHHHHHHHHHHHHHHHhhc-----cccH-HHHH-HHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhh
Confidence 999998766554444332222111 1111 1111 11111111222333445556788999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Q 011275 428 HWVINFFVGLLFLRLLEQLGPQLLYSIFGTFC 459 (489)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 459 (489)
..+++.++|.+.+.+.+..|+...+...+.++
T Consensus 411 ~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 411 GALGGALAPILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred hhHHHHHHHHHHHHHhccCChHHHHHHHHHHH
Confidence 99999999998888888888776665544433
No 30
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=2.7e-28 Score=245.83 Aligned_cols=376 Identities=13% Similarity=0.131 Sum_probs=231.3
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc----chHHHHH
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT----RNLIGML 145 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~----~~~~~l~ 145 (489)
+...+|.+.++ |++.+ +.++..+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++ .+++.++
T Consensus 48 ~~~~~p~l~~~-g~s~~--~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 124 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRG--DLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMF 124 (452)
T ss_pred HHHhhHHHHHc-CCCHH--HHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHH
Confidence 45567877776 77644 56899999999999999999999999999999999999999999888775 3788889
Q ss_pred HHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHH-HHHHHhhcccccCCchhHHHHHHHHHHHHH-HHH
Q 011275 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGL-MGSLLIGIPVKEIAGWWRICFWVSIVPAAI-LCL 223 (489)
Q Consensus 146 ~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~ 223 (489)
+.|++.|++.|...+.....+.|++|+++|++.+++++.+..+|. +++++.+.......+ ||+.|++..+..++ .++
T Consensus 125 ~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g-w~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 125 VLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND-WHAALYMPAFAAILVALF 203 (452)
T ss_pred HHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHH
Confidence 999999999998888777888999999999999999998888875 556654322222224 79999886554444 344
Q ss_pred HhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhH-HHhhhccchhHHHHHHHHHHHHhh
Q 011275 224 AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKF-EELLYGRHFRVVFIGSTLFALQQL 302 (489)
Q Consensus 224 ~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 302 (489)
..+++||+|+.... .+.++.+++.+ + +....+.++......+ ...++++.++.......+....
T Consensus 204 ~~~~~~~~~~~~~~-~~~~~~~~~~~---------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-- 268 (452)
T PRK11273 204 AFAMMRDTPQSCGL-PPIEEYKNDYP---------D---DYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLL-- 268 (452)
T ss_pred HHHHccCCHhhcCC-CChhhhhhccc---------c---ccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHH--
Confidence 55667888753211 11111000000 0 0000000000000111 1244455555443333322221
Q ss_pred hhHHHHHHhHHHHHHh-cCCC---cchHHHHHHHHHHHHHHHHHHHHhhc--CCchhHHHh-hHHHHHHHHHHHHHhhcc
Q 011275 303 SGINAIFYFSSSVFKS-AGLS---SGLANVFVGIANLLGSVVAMVLMDKL--GRKALLQWS-FFSMAVSMAIQVAASSSY 375 (489)
Q Consensus 303 ~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~--grr~~~~~~-~~~~~~~~~~~~~~~~~~ 375 (489)
.+....|.|.++++ .+++ .+.......++.+++.++.|+++||+ +||...... .....++....... .
T Consensus 269 --~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~---~ 343 (452)
T PRK11273 269 --RYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN---P 343 (452)
T ss_pred --HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh---c
Confidence 12233344554543 3444 33445566788889999999999999 455432221 11111221111111 0
Q ss_pred CCCchhhHHHHHHHHHHHHHHhc-CccccccccccccCCchhhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCchhHH
Q 011275 376 IPGSASLYLSVGGMLMFVLTFAL-GAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFF-VGLLFLRLLEQLGPQLLYS 453 (489)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~ 453 (489)
.... .......+ ..++.. +..+....+..|.+|++.|+++.|+.+...++++.+ +|.+.+.+.+..|+...|.
T Consensus 344 -~~~~--~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~ 418 (452)
T PRK11273 344 -AGNP--TVDMACMI--VIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFM 418 (452)
T ss_pred -ccCh--HHHHHHHH--HHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHH
Confidence 1111 11111111 111111 111223345679999999999999999999988765 6888888889999888888
Q ss_pred HHHHHHHHHHHHHH-hhcccCC
Q 011275 454 IFGTFCLMAVAFVK-RNVVETK 474 (489)
Q Consensus 454 ~~~~~~~~~~~~~~-~~~pet~ 474 (489)
+++++++++.++.. ...+|+|
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~ 440 (452)
T PRK11273 419 VMIGGSILAVILLIVVMIGEKR 440 (452)
T ss_pred HHHHHHHHHHHHHHHHhccccc
Confidence 88877777655443 3344444
No 31
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=2.8e-28 Score=247.48 Aligned_cols=379 Identities=16% Similarity=0.184 Sum_probs=248.5
Q ss_pred HHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHH
Q 011275 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (489)
Q Consensus 53 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~ 132 (489)
...++++.++..++.+.+++.+|.+.+|+|.+.. +.+++.+.+.++..++.+++|+++||+|||+++..+.++++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~ 89 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPL--HMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGS 89 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 4456667778888888889999999999887644 55788899999999999999999999999999999999999999
Q ss_pred HHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHH
Q 011275 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (489)
Q Consensus 133 ~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~ 212 (489)
++++++++++.+++.|+++|++.|...+....++.|++|+++|++..+++.....+|..+++.+++.+.+..+ ||+.|+
T Consensus 90 ~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-w~~~f~ 168 (471)
T PRK10504 90 LFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-WHWIFL 168 (471)
T ss_pred HHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc-HHHHHH
Confidence 9999999999999999999999999998999999999999999999999999999999999988877776666 799998
Q ss_pred HHHHHHHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHH---------HhCCCc---hhHHHH-----------HHHhhc
Q 011275 213 VSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEK---------LLGGSH---VKSSLA-----------ELSKLD 268 (489)
Q Consensus 213 ~~~~~~~~~~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~---------~~~~~~---~~~~~~-----------~~~~~~ 268 (489)
+......+..+. ....|+++. .+.|.+........ ..+.+. ...... .....+
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHA 245 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 865444433333 233454431 11122211110000 000000 000000 000001
Q ss_pred cCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHh-cCCC---cchHHHHHHHHHHHHHHHHHHH
Q 011275 269 RGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS-AGLS---SGLANVFVGIANLLGSVVAMVL 344 (489)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~i~~~~g~~~~g~l 344 (489)
+.+..+..+ .++++++++.......++...... ...++.+.+++. .+.+ .++...+..++..++.++.+++
T Consensus 246 ~~~~~~~~~-~~l~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 320 (471)
T PRK10504 246 RNNNRALFS-LKLFRTRTFSLGLAGSFAGRIGSG----MLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQV 320 (471)
T ss_pred hcCCCCccC-HHHhcccchHHHHHHHHHHHHHHH----HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111122 246777777766554444333221 122223333332 3333 3455566667777888899999
Q ss_pred HhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHH
Q 011275 345 MDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVC 424 (489)
Q Consensus 345 ~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 424 (489)
.||+|||+++..+.....+...+..... ......... ....+.+.+.+.... .......+..|++.|+++.++.
T Consensus 321 ~~r~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~ 394 (471)
T PRK10504 321 VNRFGYRRVLVATTLGLALVSLLFMLVA----LLGWYYLLP-FVLFLQGMVNSTRFS-SMNTLTLKDLPDNLASSGNSLL 394 (471)
T ss_pred HHHcCchHHHHHHHHHHHHHHHHHHhcc----ccccHHHHH-HHHHHHHHHHHHHHH-HHHHHHHHcCCHHhccchHHHH
Confidence 9999999988777665555544433211 111111111 111122222222222 2335667889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Q 011275 425 MSVHWVINFFVGLLFLRLLEQLGP 448 (489)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~g~ 448 (489)
+....++..+++.+.+.+++..++
T Consensus 395 ~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 395 SMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999888777665543
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=7.6e-29 Score=243.98 Aligned_cols=350 Identities=20% Similarity=0.180 Sum_probs=235.6
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHH
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~ 149 (489)
.++..|.+.+|+|.+.+ +.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.++++|+
T Consensus 22 ~~~~~~~~~~~~~~s~~--~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (377)
T TIGR00890 22 WTLLAPPLGRYFGVGVT--AVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYG 99 (377)
T ss_pred hhhHHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56678999999988644 5689999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHh-hcc
Q 011275 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM-VFC 228 (489)
Q Consensus 150 l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~ 228 (489)
+.|++.|..++....++.|++| ++|+++.++...+..+|..+++.+...+.+..+ ||+.|++..+..++..+.. ++.
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~~ 177 (377)
T TIGR00890 100 LASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEG-VPAAFIYMGIIFLLVIVLGAFLI 177 (377)
T ss_pred HHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHhe
Confidence 9999999888777778888887 579999999999998886654333333333344 7999988666555544443 344
Q ss_pred cCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHH
Q 011275 229 AESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAI 308 (489)
Q Consensus 229 pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (489)
+|.|+. +.++++ . ...+....++.++++.++............. . ..
T Consensus 178 ~~~~~~---~~~~~~------------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~ 224 (377)
T TIGR00890 178 GYPPGQ---LIKTNI------------E--------------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSG---L-LL 224 (377)
T ss_pred ecCchh---ccccCc------------c--------------cchhhhhHHHHHcCccHHHHHHHHHHHhHHH---H-HH
Confidence 443320 000000 0 0000012334455555544433222221111 1 11
Q ss_pred HHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHH
Q 011275 309 FYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLS 385 (489)
Q Consensus 309 ~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (489)
..+.+...++.+.+. +.......++..++.++.+++.||+|||+.+..+.....++........ ..... ..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~ 298 (377)
T TIGR00890 225 IGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP-----MLNDV-LF 298 (377)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc-----cchhH-HH
Confidence 112222334444433 3455667788899999999999999999988776666555544332211 11111 11
Q ss_pred HHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Q 011275 386 VGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAV 463 (489)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 463 (489)
.....+...... +..+....+.+|.+|++.|++..|+.+....+++.++|.+.+.+.+..|+...|.+.+++++++.
T Consensus 299 ~~~~~~~g~~~g-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 299 LATVALVFFTWG-GTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHhc-cchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 111111222221 12234445788999999999999999999999999999998888888888888877777666553
No 33
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=5.3e-28 Score=240.21 Aligned_cols=372 Identities=17% Similarity=0.197 Sum_probs=244.2
Q ss_pred HHHHHHHHhhhhccceeeccchhh-hhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHH
Q 011275 53 VLVATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (489)
Q Consensus 53 ~~~~~l~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~ 131 (489)
...+++..++...+.++..+.+|. +.+++|.+. .+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~--~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 17 IVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSA--FLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccH--HHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 345566667777777778888886 567788764 45689999999999999999999999999999999999988887
Q ss_pred HHHHHhc--------chHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccC
Q 011275 132 ASISATT--------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (489)
Q Consensus 132 ~~l~~~~--------~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~ 203 (489)
++.++.+ .++..+++.|+++|++.+...+....++.|+.|+++|++++++.+.+..+|..+++.++..+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 7766543 25667899999999999999888888899999999999999999999999988888887776666
Q ss_pred CchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhh
Q 011275 204 AGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLY 283 (489)
Q Consensus 204 ~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (489)
.+ ||+.+++..+..++..+.....||++. .+ ++ + .+.++.++
T Consensus 175 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~-~------------------------------~~~~~~~~ 216 (399)
T PRK05122 175 GG-LAGLGLLIMLLALLGLLLARPRPAVPP-----VK-GE-R------------------------------LPFRRVLG 216 (399)
T ss_pred cc-HHHHHHHHHHHHHHHHHHHhcCCCCCC-----CC-cc-c------------------------------hhHHHHHH
Confidence 66 688887654444333322222233210 00 00 0 00111111
Q ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCC-CcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHH
Q 011275 284 GRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL-SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMA 362 (489)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~ 362 (489)
+.+.......+..+. ......+.+..+.+.+. ..+.......++..++.++.+++.||+++|+.+..+....+
T Consensus 217 --~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~ 290 (399)
T PRK05122 217 --RVWPYGMGLALASIG----FGTIATFITLYYAARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEI 290 (399)
T ss_pred --HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 001110001111111 11111222222333333 23445556678888999999999999999998776665555
Q ss_pred HHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 363 VSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRL 442 (489)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (489)
++........ + . +..+...++++++.+. ..|.......|.+|++.|+++.|+.+...+++..+++.+.+.+
T Consensus 291 ~~~~~~~~~~-----~-~--~~~~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 361 (399)
T PRK05122 291 LGLLLLWLAP-----S-P--WMALIGAALTGFGFSL-VFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLV 361 (399)
T ss_pred HHHHHHHHhc-----c-H--HHHHHHHHHHHHhHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443332211 1 1 1111122222222221 2233334567889999999999999999999988888888888
Q ss_pred HHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCCHHH
Q 011275 443 LEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQE 480 (489)
Q Consensus 443 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~e 480 (489)
.+..|+...+.+.+++++++.+... ..++.+++..+|
T Consensus 362 ~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 398 (399)
T PRK05122 362 ASWFGYPSIFLAAALAALLGLALTW-LLYRRAPRAVPE 398 (399)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHH-HhcccccccCCC
Confidence 8888888888887777777655544 455555555443
No 34
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=6.7e-29 Score=247.98 Aligned_cols=377 Identities=17% Similarity=0.101 Sum_probs=257.1
Q ss_pred hhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHh----
Q 011275 62 LFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT---- 137 (489)
Q Consensus 62 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~---- 137 (489)
+.....++....+|.+.++++.+ +.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++..+.+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~s--~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~ 105 (417)
T PRK10489 28 ISIFGLGLLGVAVPVQIQMMTGS--TLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL 105 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc
Confidence 33344456677788888887654 556799999999999999999999999999999999888877776655432
Q ss_pred -cchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHH
Q 011275 138 -TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (489)
Q Consensus 138 -~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~ 216 (489)
.++++.+++.|+++|++.+...+....++.|+.|+++|++..++......+|..+|+.++..+.+..+ ||+.|++..+
T Consensus 106 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~-~~~~~~~~~~ 184 (417)
T PRK10489 106 PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGG-VAWNYGLAAA 184 (417)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh-hHHHHHHHHH
Confidence 56788899999999999888877888889999999999999999999999999999988877655545 6888887666
Q ss_pred HHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHH
Q 011275 217 PAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTL 296 (489)
Q Consensus 217 ~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (489)
..++..+..+.+||+++. +.+.++. .++. ...++..++++..+.......+
T Consensus 185 ~~~~~~~~~~~l~~~~~~---~~~~~~~----------------~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 235 (417)
T PRK10489 185 GTFITLLPLLRLPALPPP---PQPREHP----------------LRSL----------LAGFRFLLASPVVGGIALLGGL 235 (417)
T ss_pred HHHHHHHHHHhCCCCCCC---Ccccccc----------------hHHH----------HHHHHHHHcChHHHHHHHHHHH
Confidence 655555555667775421 0000000 0000 0012223344443333322222
Q ss_pred HHHHhhhhHHHHHHhHHHHHHh-cCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHh
Q 011275 297 FALQQLSGINAIFYFSSSVFKS-AGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (489)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 372 (489)
... ......+.+.+.++ .+.+ .+......+++.+++.++.+++.||.++++.+..+....+++.......
T Consensus 236 ~~~-----~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~- 309 (417)
T PRK10489 236 LTM-----ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM- 309 (417)
T ss_pred HHH-----HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc-
Confidence 111 11122233333333 4444 3455666778899999999999999777776666655444443332211
Q ss_pred hccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH
Q 011275 373 SSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLY 452 (489)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 452 (489)
+. .+......++++..... ..+....+..|..|++.|+++.|+.+...+++..+++.+.+.+.+..|....+
T Consensus 310 -----~~--~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~ 381 (417)
T PRK10489 310 -----PM--WILAVLCLALFGYLSAI-SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASA 381 (417)
T ss_pred -----ch--HHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHH
Confidence 11 11111222222222211 12344567889999999999999999999999999999999998888887787
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCHHHHHHh
Q 011275 453 SIFGTFCLMAVAFVKRNVVETKGKSLQEIEIA 484 (489)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~pet~~~~~~e~~~~ 484 (489)
.+.+.+.++..+.....+||+|+++++|+|+.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 382 SASGFGLLIIGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccccccCC
Confidence 77777776766666778899999999999864
No 35
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=1.2e-28 Score=251.29 Aligned_cols=377 Identities=18% Similarity=0.199 Sum_probs=251.2
Q ss_pred HHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHH
Q 011275 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (489)
Q Consensus 53 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~ 132 (489)
...++++.++..++.++.++.+|.+.+|+|.+.+ +.+++.+.+.++..++.++.|+++||+|||+++..+.+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLS--QVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh--hhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3456677788888989999999999999988754 45899999999999999999999999999999999999999999
Q ss_pred HHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHH
Q 011275 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (489)
Q Consensus 133 ~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~ 212 (489)
++++.++|++.++++|+++|++.+...+....++.|++|+++|+++.+++.....+|..+++.++..+.+..+ ||+.|+
T Consensus 82 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-w~~~f~ 160 (485)
T TIGR00711 82 LLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH-WRWIFL 160 (485)
T ss_pred HHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-ceehhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999888777666 799998
Q ss_pred HHHHHHHHHHH-HhhcccCChHHHHhcCCHHHHHHHH----------HHHhCC-Cchh-H-HHH-----------HHHhh
Q 011275 213 VSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEF----------EKLLGG-SHVK-S-SLA-----------ELSKL 267 (489)
Q Consensus 213 ~~~~~~~~~~~-~~~~~pEsp~~l~~~~~~~~~~~~l----------~~~~~~-~~~~-~-~~~-----------~~~~~ 267 (489)
+..+..++..+ ..++.||+++- .+++.+.....+ ....++ +... . ... .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPA--ASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVW 238 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCcccc--ccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 86655544433 33456665321 111111110000 000000 0000 0 000 00000
Q ss_pred ccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHh-cCCC---cchHHHHHHHHHHHHHHHHHH
Q 011275 268 DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS-AGLS---SGLANVFVGIANLLGSVVAMV 343 (489)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~i~~~~g~~~~g~ 343 (489)
+..+ .++....+.++++.++......++.....+ ...++.+.+++. .+.+ .+....+..++..++.++.|+
T Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~ 313 (485)
T TIGR00711 239 ELTD-DNPLVDLRLFKYRNFTIGCVYMSLLGLGLY----GSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGR 313 (485)
T ss_pred HHcC-CCCccCHHHHcCCChHHHHHHHHHHHHHHH----HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 111112345666666655444333332222 222333333332 3443 356667778889999999999
Q ss_pred HHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHH
Q 011275 344 LMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAV 423 (489)
Q Consensus 344 l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 423 (489)
+.||+|||+.+..+.....++........ .+... ........++.+++.+....+.. ....|..|++.|+++.|+
T Consensus 314 l~~r~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~l~g~g~~~~~~~~~-~~~~~~~~~~~~g~~~~~ 388 (485)
T TIGR00711 314 MGDKIDPRKLVTIGLILYAVGFYWRAFTF---TPDTP-FLAIALPQFIRGFGMGCFFMPLT-TIALSGLPPHKIARGSSL 388 (485)
T ss_pred HHhhcCcHHHHHHHHHHHHHHHHHHhccC---CCCCC-HHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHhHHHHH
Confidence 99999999988777665555544332111 11111 11111112222232222222332 345577899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 011275 424 CMSVHWVINFFVGLLFLRLLE 444 (489)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~ 444 (489)
.+....+++.+++.+.+.+.+
T Consensus 389 ~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 389 SNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888777665
No 36
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=2.7e-28 Score=244.93 Aligned_cols=385 Identities=13% Similarity=0.088 Sum_probs=238.5
Q ss_pred cceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc----chH
Q 011275 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT----RNL 141 (489)
Q Consensus 66 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~----~~~ 141 (489)
+...+....|.+. +.|.+. .+.++..+.+.++..+++++.|+++||+|||+++..+.++.+++.++.+.. .++
T Consensus 42 ~~~~~~~~~p~~~-~~g~s~--~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (438)
T TIGR00712 42 VRKNFALAMPYLV-EQGFSK--GELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSI 118 (438)
T ss_pred HhccHHhhhHHHH-HcCCCH--hHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchH
Confidence 3333445566665 457654 456899999999999999999999999999999999999999988887664 467
Q ss_pred HHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhc-ccccCCchhHHHHHHHHHHHHH
Q 011275 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI-PVKEIAGWWRICFWVSIVPAAI 220 (489)
Q Consensus 142 ~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~wr~~f~~~~~~~~~ 220 (489)
..+.+.|++.|++.|...+....++.|++|+++||+++++++.+..+|..+++.+.. ......+ ||+.|++..+..++
T Consensus 119 ~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~-w~~~f~~~~~~~~i 197 (438)
T TIGR00712 119 AIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND-WHAALYFPAICAII 197 (438)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHH
Confidence 778899999999999888888889999999999999999999998888766655433 3332334 79999986655554
Q ss_pred H-HHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHH
Q 011275 221 L-CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFAL 299 (489)
Q Consensus 221 ~-~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (489)
. ++..+++||+|+.... +..+.. + .+.. ++ .. ++.+++.+.+.......++++.++.......+...
T Consensus 198 ~~~~~~~~~~~~~~~~~~--~~~~~~---~---~~~~-~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (438)
T TIGR00712 198 VALFAFAMMRDTPQSCGL--PPIEEY---R---NDYP-DD-YN--EKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYL 265 (438)
T ss_pred HHHHHHHhccCCHHhcCC--CCchhc---c---cccc-cc-cc--cccccccchHHHHHHHHccCchHHHHHHHHHHHHH
Confidence 3 3445667888753210 000000 0 0000 00 00 00000000000011234455555544333222221
Q ss_pred HhhhhHHHHHHhHHHHHHh-cCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhcc
Q 011275 300 QQLSGINAIFYFSSSVFKS-AGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSY 375 (489)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 375 (489)
..+....+.|.++++ .+.+ .++......++.+++.+++++++||+++++....+.....+............
T Consensus 266 ----~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (438)
T TIGR00712 266 ----LRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNP 341 (438)
T ss_pred ----HHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcC
Confidence 122333445555543 3544 34566677788899999999999999654322223222211111111111110
Q ss_pred CCCchhhHHHHHHHHHHHHHHh-cCccccccccccccCCchhhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCchhHH
Q 011275 376 IPGSASLYLSVGGMLMFVLTFA-LGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVIN-FFVGLLFLRLLEQLGPQLLYS 453 (489)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~ 453 (489)
... .+.... ..+..++. .+..........|.+|++.|+++.|+.+.++++++ .++|.+.+.+.+..|+...+.
T Consensus 342 -~~~--~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~ 416 (438)
T TIGR00712 342 -AGN--PLVDMI--CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFM 416 (438)
T ss_pred -CCc--hHHHHH--HHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHH
Confidence 011 111111 11112221 12112223456799999999999999999988875 568888888888888888888
Q ss_pred HHHHHHHHHHHHHHhhcccCCC
Q 011275 454 IFGTFCLMAVAFVKRNVVETKG 475 (489)
Q Consensus 454 ~~~~~~~~~~~~~~~~~pet~~ 475 (489)
++.++++++.+.....+||.|+
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 417 VMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhccC
Confidence 8888787787777788888764
No 37
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.96 E-value=1.2e-27 Score=235.97 Aligned_cols=361 Identities=14% Similarity=0.137 Sum_probs=238.2
Q ss_pred HHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHH
Q 011275 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (489)
Q Consensus 54 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~ 133 (489)
...+...+..+......++.+|.+.+|+|.+.+ +.++..+.+.+++.+++++.|+++||+|||+++..+.++++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~--~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 83 (382)
T PRK10091 6 LSLALGTFGLGMAEFGIMGVLTELAHDVGISIP--AAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA 83 (382)
T ss_pred HHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHH--HHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 345556677777777788899999999988754 468999999999999999999999999999999999999999999
Q ss_pred HHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHH
Q 011275 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (489)
Q Consensus 134 l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~ 213 (489)
++++++|++.+++.|+++|++.|...+....++.|++|+++|++.++.+..+..+|..++++++..+.+..+ ||+.|++
T Consensus 84 l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~~ 162 (382)
T PRK10091 84 MFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-WRYTFLL 162 (382)
T ss_pred HHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc-HHHHHHH
Confidence 999999999999999999999998888888889999999999999999999999998888888777666556 7999998
Q ss_pred HHHHHHHHH-HHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHH
Q 011275 214 SIVPAAILC-LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (489)
Q Consensus 214 ~~~~~~~~~-~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (489)
.++..++.. ....++||.++ +.+ .+.+ + ..+.++++..+....
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~----~~~-~~~~-------------~------------------~~~~~~~~~~~~~~~ 206 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRD----EAK-GGLR-------------E------------------QFHFLRSPAPWLIFA 206 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCc----ccc-cCHH-------------H------------------HHHHhcChHHHHHHH
Confidence 665544433 33445677531 000 0000 0 001122222222221
Q ss_pred HHHHHHHHhhhhHHHHHHh-HHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHH
Q 011275 293 GSTLFALQQLSGINAIFYF-SSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (489)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 368 (489)
...+. . .+......+ .+...+..+.+. +.......++..++.++.+++.||+|+|+.+..+....+++....
T Consensus 207 ~~~~~---~-~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~ 282 (382)
T PRK10091 207 ATMFG---N-AGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLML 282 (382)
T ss_pred HHHHH---H-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHH
Confidence 11111 1 111111122 222223345543 345566778899999999999999999998877766555554333
Q ss_pred HHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hC
Q 011275 369 VAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ-LG 447 (489)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 447 (489)
..... . .... ....++...+......+.......+..|.+.++.+. .+...+++..++|.+.+.+.+. .+
T Consensus 283 ~~~~~----~-~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~ 353 (382)
T PRK10091 283 FFFGG----M-KTAS--LIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLA 353 (382)
T ss_pred HHHHh----h-HHHH--HHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccC
Confidence 22111 1 1111 111111222211111222223344555555555543 4566788999999988888885 56
Q ss_pred CchhHHHHHHHHHHHHHHH
Q 011275 448 PQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~ 466 (489)
+...+.+.++++++....+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 354 YNYVALPAALLSFAAMSSL 372 (382)
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 7777777666665554433
No 38
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=8.5e-28 Score=238.40 Aligned_cols=374 Identities=20% Similarity=0.250 Sum_probs=242.2
Q ss_pred HHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHH
Q 011275 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (489)
Q Consensus 53 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~ 132 (489)
.....+..+..+++....+...|.+.+++|.+.+ +.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 96 (398)
T TIGR00895 19 IILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPV--QLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFT 96 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHH--HHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3444555566677666777788999999887644 56889999999999999999999999999999999999999999
Q ss_pred HHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHH
Q 011275 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (489)
Q Consensus 133 ~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~ 212 (489)
++.+++++++.+++.|++.|++.+...+....++.|++|+++|++..++...+..+|..+++.++..+.+..+ ||+.|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~~~ 175 (398)
T TIGR00895 97 LLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-WRSLFY 175 (398)
T ss_pred HHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-ceeehh
Confidence 9999999999999999999999999999999999999999999999999999999999988888777666556 688887
Q ss_pred HHH-HHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHH
Q 011275 213 VSI-VPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (489)
Q Consensus 213 ~~~-~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (489)
+.+ +..+...+...++||++++...+ +.++..+..++.......+.. ++..+.++++.......+..++.+..+...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (398)
T TIGR00895 176 VGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEAQ-SALPEQKATQGTKRSVFKALFQGKTARITV 253 (398)
T ss_pred hhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhcccccc-ccccccccccchhhHHHHHHhcchhHHHHH
Confidence 763 44444455566789998765544 333333332222111000000 000000000000111122223222222222
Q ss_pred HHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHH
Q 011275 292 IGSTLFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (489)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 368 (489)
.......+.. ........+.+...+..+.+. +.......++..++.++.++++||++||+.. ......++...+.
T Consensus 254 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~ 331 (398)
T TIGR00895 254 LLWLLYFMLL-VGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTA-LLLLLGAVFAVLV 331 (398)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHH-HHHHHHHHHHHHH
Confidence 2111221111 122233334455555555543 3455667788899999999999999998443 3333333322222
Q ss_pred HHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 011275 369 VAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLR 441 (489)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 441 (489)
.... .+... .....++.++..+ +..+....+..|.+|++.|+++.|+...+.+++..++|.+.+.
T Consensus 332 ~~~~----~~~~~---~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 332 GSTL----FSPTL---LLLLGAIAGFFVN-GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHh----hCHHH---HHHHHHHHHHHHH-HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 2111 11111 1111222222222 1234556789999999999999999999999999888877654
No 39
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=2.5e-27 Score=235.84 Aligned_cols=357 Identities=17% Similarity=0.139 Sum_probs=234.6
Q ss_pred HHHHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHH
Q 011275 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (489)
Q Consensus 50 ~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~ 129 (489)
....+.+.++.+...++.+.+.+.+|.+.+|+|.+.+ +.++..+.+.+++.+++++.|+++||+|||+++..+..+..
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 89 (406)
T PRK15402 12 LLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAE--WVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFI 89 (406)
T ss_pred HHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 3344555666666677778888899999999988644 55788999999999999999999999999999999999999
Q ss_pred HHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHH
Q 011275 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (489)
Q Consensus 130 i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~ 209 (489)
++..+...+++++.+++.|+++|++.+...+....++.|++|+++|++..++......+|..+++.++..+.+..+ ||+
T Consensus 90 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~-w~~ 168 (406)
T PRK15402 90 LTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP-WRG 168 (406)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-ccH
Confidence 9999999999999999999999999988888888899999999999999898887777888888888776655555 799
Q ss_pred HHHHHHHHHHHHHH-HhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchh
Q 011275 210 CFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (489)
Q Consensus 210 ~f~~~~~~~~~~~~-~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (489)
.|++..+..++..+ ..+..||+++. +++..+ .++ . ...+++.+++++++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------~~~----~----------~~~~~~~~~~~~~~ 218 (406)
T PRK15402 169 MFVLFAALAALSFFGLWRAMPETAGR---VGEKLS-------------LKE----L----------GRDYKLVLKNRRFV 218 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcc---cccccc-------------HHH----H----------HHHHHHHHcCcHHH
Confidence 99876555444433 33456776431 000000 000 0 01223445555555
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHhHHHHH-HhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHH
Q 011275 289 VVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVS 364 (489)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~ 364 (489)
.......+....... ...+.+.++ +..+.+. +.......++.+++.++.+++.||+++|+.+..+.....++
T Consensus 219 ~~~~~~~~~~~~~~~----~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 219 AGALALGLVSLPLLA----WIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHH----HHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 443332222211111 111222222 2334442 34445556778889999999999999999887776655555
Q ss_pred HHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 365 MAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE 444 (489)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (489)
..+........ ... ..+ .+....++..+..... +........ .+++.|++..++.+....++..+++.+...+.+
T Consensus 295 ~~~~~~~~~~~-~~~-~~~-~~~~~~~~g~g~~~~~-~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 295 LLLAALATVIS-SHA-YLW-LTAGLSLYAFGIGLAN-AGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred HHHHHHHHHcc-ccc-HHH-HHHHHHHHHHHHHHHh-hhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 54443322111 111 111 1122223333322211 222222222 244889999999999999998888887777666
Q ss_pred HhCC
Q 011275 445 QLGP 448 (489)
Q Consensus 445 ~~g~ 448 (489)
..+.
T Consensus 370 ~~~~ 373 (406)
T PRK15402 370 GGGN 373 (406)
T ss_pred CCch
Confidence 5553
No 40
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.96 E-value=5.5e-27 Score=233.12 Aligned_cols=366 Identities=16% Similarity=0.143 Sum_probs=227.4
Q ss_pred HHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHH
Q 011275 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (489)
Q Consensus 55 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l 134 (489)
.+.+..++...+.++..+++|++.++++.+.+ +.++..+.+.+|+.+++++.|+++||+|||+++..+.+++++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 97 (413)
T PRK15403 20 ALILYDFAAYLTTDLIQPGIINVVRDFNADVS--LAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAA 97 (413)
T ss_pred HHHHHHHHHHHHHHhhccCHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 34555566667788899999999999987655 4578899999999999999999999999999999999999999999
Q ss_pred HHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHH
Q 011275 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (489)
Q Consensus 135 ~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~ 214 (489)
++.++|++.++++|+++|++.+...+....++.|++|+++|++.++++.....+|..++++++..+.+..+ ||+.|++.
T Consensus 98 ~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~~f~~~ 176 (413)
T PRK15403 98 TLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKVLFAII 176 (413)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHH
Confidence 99999999999999999999887677777889999999999999999999999999999998877766555 79999987
Q ss_pred HHHHHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHH
Q 011275 215 IVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (489)
Q Consensus 215 ~~~~~~~~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (489)
.+..++..+. .+.+||+++ .+++..+ .+.. ...+++.++++.++.....
T Consensus 177 ~~~~~i~~~~~~~~lp~~~~---~~~~~~~-------------~~~~--------------~~~~~~ll~~~~~~~~~l~ 226 (413)
T PRK15403 177 AVMGLIAFVGLLLAMPETVK---RGAVPFS-------------AKSV--------------LRDFRNVFRNRLFLTGAAT 226 (413)
T ss_pred HHHHHHHHHHHHHhCCCCcc---ccCCCCC-------------hHHH--------------HHHHHHHHcCHHHHHHHHH
Confidence 6665554443 455788742 0100000 0000 0123445555555544333
Q ss_pred HHHHHHHhhhhHHHHHHhHHHHHHh-cCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHH
Q 011275 294 STLFALQQLSGINAIFYFSSSVFKS-AGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 369 (489)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 369 (489)
..+.... ......+.|.++++ .+.+. ++.......+.++++.+.+++.+|..+++..........++..+..
T Consensus 227 ~~~~~~~----~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~ 302 (413)
T PRK15403 227 LSLSYIP----MMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLI 302 (413)
T ss_pred HHHHHHH----HHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHH
Confidence 2222111 12222233444443 35543 3444556677777777777766544443433222222222222221
Q ss_pred HHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Q 011275 370 AASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQ 449 (489)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 449 (489)
..... .+.. .........++..+......+... ..-+. ....++++.++.+.+...+...++.....+.. .+..
T Consensus 303 ~~~~~-~~~~--~~~~~~~~~l~~~G~~~~~p~~~~-~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~-~~~~ 376 (413)
T PRK15403 303 VGNLL-WPHV--WLWSVLGTSLYAFGIGLIFPTLFR-FTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWF-NGGR 376 (413)
T ss_pred HHHHH-cccc--HHHHHHHHHHHHHHHHHHhHHHHH-HHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCc
Confidence 11100 1111 111112222233332222111111 11111 12237888888888887777777766554433 3555
Q ss_pred hhHHHHHHHHHHHH
Q 011275 450 LLYSIFGTFCLMAV 463 (489)
Q Consensus 450 ~~~~~~~~~~~~~~ 463 (489)
..+...++++.+..
T Consensus 377 ~~~~~~~~~~~~~~ 390 (413)
T PRK15403 377 LPFHLLAVVAGVIV 390 (413)
T ss_pred hHHHHHHHHHHHHH
Confidence 66665555544443
No 41
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=1.7e-26 Score=227.85 Aligned_cols=359 Identities=18% Similarity=0.178 Sum_probs=244.6
Q ss_pred HHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHH
Q 011275 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (489)
Q Consensus 53 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~ 132 (489)
+..+.++.++.+.+.+..++.+|.+.+++|.+. .+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~--~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~ 85 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPT--WQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGC 85 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCH--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667778888888999999999999998754 467999999999999999999999999999999999999999999
Q ss_pred HHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHH
Q 011275 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (489)
Q Consensus 133 ~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~ 212 (489)
.++++++|++.+++.|+++|++.+...+.....+.|..++++|++..+.+..+..+|..+|+.++..+.+... |+..+.
T Consensus 86 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~~ 164 (381)
T PRK03633 86 AGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM-SVLPWV 164 (381)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-chHHHH
Confidence 9999999999999999999999998888777778889999999999999999999999999998877654322 222222
Q ss_pred HHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHH
Q 011275 213 VSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (489)
Q Consensus 213 ~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (489)
.......+..+.....+|++ .+ ++ +..+..+.++++.++....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~------~~----------------------------~~---~~~~~~~~~~~~~~~~~~~ 207 (381)
T PRK03633 165 TGLVLAAILPLLFTRILNQQ------AE----------------------------NH---DSTSIWPMLKLRQARLGVN 207 (381)
T ss_pred HHHHHHHHHHHHHhcccCCC------CC----------------------------CC---CCCCHHHHHHhcchHHHHH
Confidence 11111111111111111110 00 00 0012233445555443322
Q ss_pred HHHHHHHHhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHH
Q 011275 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 369 (489)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 369 (489)
........ ......+.+.+.++.+.+. +.......++.+++.+..+++.||+|+|+.+..+.....++.....
T Consensus 208 ~~~~~~~~----~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~ 283 (381)
T PRK03633 208 GCIISGIV----LGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML 283 (381)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh
Confidence 22111111 1112223444445555543 3444556678889999999999999999987776555555443221
Q ss_pred HHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Q 011275 370 AASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQ 449 (489)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 449 (489)
. . ..... ...+++... ....|....+..|..|++.++...+..+...++++.++|.+.+.+.+..++.
T Consensus 284 --~-----~-~~~~~---~~~l~g~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~ 351 (381)
T PRK03633 284 --S-----Q-AAMAP---ALFILGAAG-FTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDN 351 (381)
T ss_pred --h-----h-HHHHH---HHHHHHHHH-HhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 1 0 01111 111122211 1234556667789999888888888877778889999999999888988888
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 011275 450 LLYSIFGTFCLMAVAFVK 467 (489)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~ 467 (489)
+.|.+.+.+.++..+..+
T Consensus 352 ~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 352 LLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888877776655554
No 42
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=1.8e-28 Score=241.56 Aligned_cols=365 Identities=16% Similarity=0.137 Sum_probs=231.7
Q ss_pred hccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHH
Q 011275 64 GYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIG 143 (489)
Q Consensus 64 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~ 143 (489)
.++....+...|.+.+++|.+.+ +.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++.+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~g~s~~--~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (379)
T TIGR00881 8 YLVRKNFALAMPYLVEEIGLSKT--DLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWV 85 (379)
T ss_pred HHhHHhhhhhhHHHHHHhCCCHh--HHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHH
Confidence 34455567778889999888754 5689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHH-HhhcccccCCchhHHHHHHHHHHHHH-H
Q 011275 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL-LIGIPVKEIAGWWRICFWVSIVPAAI-L 221 (489)
Q Consensus 144 l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~wr~~f~~~~~~~~~-~ 221 (489)
+++.|++.|++.+...+....++.|++|+++|++..++...+..+|..+++ +.+..+.+..+ ||+.|++..+..++ .
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 164 (379)
T TIGR00881 86 MAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WHWVFIVPGIIAIIVS 164 (379)
T ss_pred HHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988888 45554444445 79998876544443 3
Q ss_pred HHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHh
Q 011275 222 CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQ 301 (489)
Q Consensus 222 ~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (489)
.+..++.+|+|+.... +.++. +. .++ .++. .++.+++....+...++.++++..+.......+.....
T Consensus 165 ~~~~~~~~~~~~~~~~--~~~~~-~~-----~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (379)
T TIGR00881 165 LICFLLLRDSPQSCGL--PPAEE-MP-----NEE-PDGD---AEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVR 232 (379)
T ss_pred HHHheeeCCCcccccc--Ccccc-Cc-----ccc-cccc---cccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 4445567777642110 00000 00 000 0000 00000000111123445556665554443333222211
Q ss_pred hhhHHHHHHhHHHHH-HhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCC
Q 011275 302 LSGINAIFYFSSSVF-KSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIP 377 (489)
Q Consensus 302 ~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (489)
.....+.+..+ +..+.+ .+.......++.+++.++.+++.||..+|+..................... .+
T Consensus 233 ----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 306 (379)
T TIGR00881 233 ----TGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL--NP 306 (379)
T ss_pred ----HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc--Cc
Confidence 12222333333 233443 345566677888999999999999864333221211111111111111111 01
Q ss_pred CchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Q 011275 378 GSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLL 451 (489)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 451 (489)
....... .......+. +..+..+....+..|.+|++.|+++.|+.+.+.++++.++|.+.+.+.+..|+...
T Consensus 307 ~~~~~~~-~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 378 (379)
T TIGR00881 307 AANPLMD-LICLFALGF-LVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGA 378 (379)
T ss_pred chhHHHH-HHHHHHHHH-HHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhccccc
Confidence 1111111 111111111 12223334456789999999999999999999999999999999998888876544
No 43
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=2.4e-26 Score=227.21 Aligned_cols=345 Identities=19% Similarity=0.175 Sum_probs=228.1
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHH
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~ 149 (489)
..+.+|.+.+|+|.+.+ +.++..+.+.++..+++++.|+++||+|||+++..+.++++++.+++++++|++.+++.|+
T Consensus 39 ~~~~l~~~~~~~g~s~~--~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 116 (394)
T PRK10213 39 PVSLLTPMAQDLGISEG--VAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRA 116 (394)
T ss_pred HHhhHHHHHHHcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHH
Confidence 34457889999988754 4578889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHH-hhcc
Q 011275 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA-MVFC 228 (489)
Q Consensus 150 l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~ 228 (489)
++|++.|...+....++.|++|+++|+++.++...+..+|..++++++..+.+..+ ||+.|++..+..++..+. ....
T Consensus 117 l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~l~~~~~l~~~~~~ 195 (394)
T PRK10213 117 CLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WRNVFNAAAVMGVLCIFWIIKSL 195 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999888776666 799998865544443333 2345
Q ss_pred cCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHH
Q 011275 229 AESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAI 308 (489)
Q Consensus 229 pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (489)
||+|+. + ++ ...+..+.++++.++.......+.....+ ...
T Consensus 196 p~~~~~-----~-~~------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~ 236 (394)
T PRK10213 196 PSLPGE-----P-SH------------------------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQF---AFF 236 (394)
T ss_pred CCCCcc-----c-cc------------------------------chhHHHHHhcCHHHHHHHHHHHHHHHHHH---HHH
Confidence 665310 0 00 00012234444444443332222211111 111
Q ss_pred HHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHH
Q 011275 309 FYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLS 385 (489)
Q Consensus 309 ~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (489)
.+..+.+.++.+.+. +......+++..++.++.+++.||.+++... .+.....+.......... . .+..
T Consensus 237 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~-~~~~~~~~~~~~l~~~~~----~---~~~~ 308 (394)
T PRK10213 237 TYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALA-GAPLVLAVSALVLTLWGS----D---KIVA 308 (394)
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH-HHHHHHHHHHHHHHHHhh----h---HHHH
Confidence 122243444455543 4556667788999999999999996544333 332222222222111111 1 1111
Q ss_pred HHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Q 011275 386 VGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAF 465 (489)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 465 (489)
....+++++++... .+....+..+..| +.+++..+....+.+++..+++.+.+.+.+..|....+...+.+.++..+.
T Consensus 309 ~~~~~l~G~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 309 TGVAIIWGLTFALV-PVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHHHHHHHHHHhh-hHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 12223333333322 2223335566667 445666777777788889999999999988888766666665555444444
Q ss_pred H
Q 011275 466 V 466 (489)
Q Consensus 466 ~ 466 (489)
.
T Consensus 387 ~ 387 (394)
T PRK10213 387 V 387 (394)
T ss_pred H
Confidence 3
No 44
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=2.3e-27 Score=232.41 Aligned_cols=352 Identities=15% Similarity=0.112 Sum_probs=237.8
Q ss_pred HHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHh
Q 011275 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (489)
Q Consensus 58 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~ 137 (489)
.+.++.....+..++.+|.+..|++.+ +.+.+++.+.+.+++.+++++.|+++||+|||+++..+.++..++..+.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 6 AAQLISLIGTAITQVALPLYVLAGTGS--ASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc--HHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 344555566667778888888887654 456789999999999999999999999999999999999999888888887
Q ss_pred cc-----hHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHH
Q 011275 138 TR-----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (489)
Q Consensus 138 ~~-----~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~ 212 (489)
+. +++.+++.|+++|++.+...+....++.|++|+++|++..++.+.+..+|..++++++..+.+..+ ||+.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~~~~~ 162 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG-IKWAIW 162 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHH
Confidence 77 999999999999999999999999999999999999999999999999999999998877766555 799998
Q ss_pred HHHHHHHHHHHHhhc--ccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHH
Q 011275 213 VSIVPAAILCLAMVF--CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (489)
Q Consensus 213 ~~~~~~~~~~~~~~~--~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (489)
+..+..++..+..+. .||+++ +++.+..++. ..+. ...++..++++.++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-------------~~~~----------~~~~~~~~~~~~~~~~ 215 (365)
T TIGR00900 163 VDAVGFAISALLIVSVRIPELAA----SEIQALSNAV-------------LRDT----------REGIKFVLKNPLLRTL 215 (365)
T ss_pred HHHHHHHHHHHHHHhcccccCCC----ccccccchhH-------------HHHH----------HhHHHHHHcCcHHHHH
Confidence 765554444333332 233221 0000000000 0000 0123344555555544
Q ss_pred HHHHHHHHHHhhhhH-HHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHH
Q 011275 291 FIGSTLFALQQLSGI-NAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 369 (489)
Q Consensus 291 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 369 (489)
.....+......... ...+++..+.++......+.......++.+++.++.+++.||++||+....+....+++.....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (365)
T TIGR00900 216 LLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVG 295 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHH
Confidence 433333222211111 2223333222222222235566677788899999999999999999987766554444443332
Q ss_pred HHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011275 370 AASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 447 (489)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 447 (489)
... . ..+......+...++... ..+....+..|..|++.|+++.|+.+.+.+++..+++.+.+.+.+..|
T Consensus 296 ~~~-----~--~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 296 LTP-----P--NFPLFLVLWFAIGVGYGP-INVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred hhc-----h--hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 211 1 111222222222222222 234556688999999999999999999999999999988888776543
No 45
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=6.9e-27 Score=236.53 Aligned_cols=363 Identities=15% Similarity=0.092 Sum_probs=214.8
Q ss_pred hccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHH
Q 011275 64 GYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIG 143 (489)
Q Consensus 64 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~ 143 (489)
.++.....+.+|.+.+|+|++.+ +.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++++++++..
T Consensus 49 ~~~~~~~~~~~~~l~~~~gls~~--~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~ 126 (476)
T PLN00028 49 FVSTFAAAPLLPIIRDNLNLTKS--DIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATG 126 (476)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 33334456778899999998754 5578888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhccc----cc-----CCchhHHHHHHH
Q 011275 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV----KE-----IAGWWRICFWVS 214 (489)
Q Consensus 144 l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~----~~-----~~~~wr~~f~~~ 214 (489)
+++.|+++|++.+... ....+++|++|+++||+++++......+|..+++.+...+ .+ ..+ ||+.|++.
T Consensus 127 l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~g-Wr~~f~i~ 204 (476)
T PLN00028 127 FIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTA-WRIAFFVP 204 (476)
T ss_pred HHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh-hHHHHHHH
Confidence 9999999999987654 3456789999999999999998766555554443332211 11 123 89999987
Q ss_pred HHHHHHHHHHhhcccC-ChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHH
Q 011275 215 IVPAAILCLAMVFCAE-SPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (489)
Q Consensus 215 ~~~~~~~~~~~~~~pE-sp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (489)
++..++..+..++++| .|+ ++.++. ++ +.+.++......+++.+++++.+.....
T Consensus 205 g~l~l~~~l~~~~~~~~~p~-----~~~~~~----~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (476)
T PLN00028 205 GLLHIIMGILVLTLGQDLPD-----GNYREL----KK---------------SGTMPKDSFSKVLRYGVTNYRTWILALT 260 (476)
T ss_pred HHHHHHHHHHHHHHcCcCCC-----CchhhH----Hh---------------cCccccccHHHHHHHHHcCchhHHHHHH
Confidence 6666555544444443 221 111110 00 0000000001123344455554443332
Q ss_pred HHHHHHHhhhhHHHHHHhHHHHH-HhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchh----HHHhhHHHHHHH
Q 011275 294 STLFALQQLSGINAIFYFSSSVF-KSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKAL----LQWSFFSMAVSM 365 (489)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~----~~~~~~~~~~~~ 365 (489)
........ .....+.+.++ +..+.+. +.......++..++.+++|+++||++||+. .....+...+..
T Consensus 261 ~~~~~~~~----~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~ 336 (476)
T PLN00028 261 YGYSFGVE----LTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGG 336 (476)
T ss_pred HHHHHHHH----HHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 21111111 11222333333 3345553 345566778899999999999999987621 111111111111
Q ss_pred HHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 366 AIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ 445 (489)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (489)
+...... . ... ....+..++++....... .+..+.+.+|+.| +.|++..|+.+..+++++.+++.+.. ..+.
T Consensus 337 i~~~~~~--~-~~~--~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~ 408 (476)
T PLN00028 337 VFCIWLG--R-ANS--LGAAIVVMILFSIFVQAA-CGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSS 408 (476)
T ss_pred HHHHHhc--c-cch--HHHHHHHHHHHHHHHHHh-hhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCC
Confidence 1111111 1 111 111111222222222111 1234456677755 78999999998888888888776543 1122
Q ss_pred hCCchhHHHHHHHHHHHHHHH
Q 011275 446 LGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 446 ~g~~~~~~~~~~~~~~~~~~~ 466 (489)
.++...|.+.+++.+++.+..
T Consensus 409 ~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 409 YSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred ccHhhHHHHHHHHHHHHHHHH
Confidence 345667777777666665433
No 46
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=2.5e-26 Score=227.67 Aligned_cols=356 Identities=17% Similarity=0.170 Sum_probs=232.6
Q ss_pred HHHhhhhccceeeccchhh-hhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHH-
Q 011275 58 LSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS- 135 (489)
Q Consensus 58 l~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~- 135 (489)
++.++.....++..+.+|. +.+|+|.+.+ +.|+..+.+.+++.+++++.|+++||+|||+++..+.+.+.++.+..
T Consensus 22 ~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~--~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~ 99 (392)
T PRK12382 22 FAVFLTYMTVGLPLPVIPLFVHHDLGFGNT--MVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYL 99 (392)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHH
Confidence 3344444455666777775 5678887644 56899999999999999999999999999999999888877665432
Q ss_pred --Hh-----cchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhH
Q 011275 136 --AT-----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (489)
Q Consensus 136 --~~-----~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr 208 (489)
+. ..+++.+++.|+++|++.+...+....++.|++|+++|++++++++.+..+|..++++++..+.+..+ ||
T Consensus 100 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~ 178 (392)
T PRK12382 100 LAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG-FA 178 (392)
T ss_pred hhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC-hH
Confidence 22 35788899999999999998888888889999999999999999999999999888888877666556 68
Q ss_pred HHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchh
Q 011275 209 ICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (489)
Q Consensus 209 ~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (489)
+.+++..+..++........||++. ++++ + .+.++..+ ..+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~----------~---------------------~~~~~~~~--~~~ 219 (392)
T PRK12382 179 ALALTTMVLPLLAWAFNGTVRKVPA------HAGE----------R---------------------PSLWSVVG--LIW 219 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCC------Cccc----------C---------------------chHHHHHH--HHH
Confidence 8777654433332222222233211 0000 0 00001110 000
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHH
Q 011275 289 VVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLS-SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 367 (489)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 367 (489)
.......+.... ......+.+..+++.+.+ .+......+++..++.++.+++.||+|+|+.+..+.....++..+
T Consensus 220 ~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~ 295 (392)
T PRK12382 220 KPGLGLALQGVG----FAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLL 295 (392)
T ss_pred HhHHHHHHHHHH----HhHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHH
Confidence 000111111111 111122223333333433 334445566778889999999999999999887776655555443
Q ss_pred HHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011275 368 QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 447 (489)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 447 (489)
.... .+ . +.......+...+.+. ..|.......|.+|++.|+++.|+.+...+++..+++.+.+.+.+..|
T Consensus 296 ~~~~-----~~-~--~~~~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g 366 (392)
T PRK12382 296 LWLA-----PT-A--WVALAGAALTGAGCSL-IFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG 366 (392)
T ss_pred HHHc-----cc-H--HHHHHHHHHHHHHHHh-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3221 11 1 1111122222222221 223444567788999999999999999999999999999998889889
Q ss_pred CchhHHHHHHHHHHHHHHHHh
Q 011275 448 PQLLYSIFGTFCLMAVAFVKR 468 (489)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~ 468 (489)
+...|.+.+++.+++.+....
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 367 YPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred chHHHHHHHHHHHHHHHHHHh
Confidence 988888888777777665543
No 47
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=9.9e-28 Score=242.99 Aligned_cols=359 Identities=14% Similarity=0.112 Sum_probs=226.5
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc--chHHHHHHHHHHHhhhccc
Q 011275 80 DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT--RNLIGMLLGRFVVGTGMGL 157 (489)
Q Consensus 80 ~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~--~~~~~l~~~R~l~G~g~g~ 157 (489)
|++++ ..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++.++ .++..+++.|+++|++.+.
T Consensus 70 ~~~~s--~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~ 147 (465)
T TIGR00894 70 NFKWS--GALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGS 147 (465)
T ss_pred CCCCC--HHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhccc
Confidence 45554 4567899999999999999999999999999999999999999998887543 5688899999999999999
Q ss_pred ccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCC-chhHHHHHHHHHHHHHHHHHh-hcccCChHHH
Q 011275 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA-GWWRICFWVSIVPAAILCLAM-VFCAESPHWL 235 (489)
Q Consensus 158 ~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~-~~wr~~f~~~~~~~~~~~~~~-~~~pEsp~~l 235 (489)
..+....++.|++|+++|++++++...+..+|..++++++..+.+.. + ||+.|++.++..++..+.+ .+.+|+|+.
T Consensus 148 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~~~p~~- 225 (465)
T TIGR00894 148 VSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGG-WPMIFYVFGIVGCAWSLLWFVFPADDPSI- 225 (465)
T ss_pred chhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CCeehhhhhHHHHHHHHHHHHHhcCCccc-
Confidence 99999999999999999999999999999999988888877766553 5 7999998766665554444 345666642
Q ss_pred HhcCCHHHHH-HHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHH
Q 011275 236 YKKGRTAEAE-AEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSS 314 (489)
Q Consensus 236 ~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (489)
+.+.++.+ +..++ ..+.++.+.....++++.++++..+......+.... ..+....|.|.
T Consensus 226 --~~~~~~~~~~~i~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~lp~ 286 (465)
T TIGR00894 226 --HPCISKFEKKYINS-------------SLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFW----LYTILPTYLPT 286 (465)
T ss_pred --CCCCCHHHHHHHHh-------------hcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 11111111 11110 000011111122346677776666555443333222 22333345554
Q ss_pred HHHh-cCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHH---HhhHHHHHHH---HHHHHHhhccCCCchhhHH
Q 011275 315 VFKS-AGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQ---WSFFSMAVSM---AIQVAASSSYIPGSASLYL 384 (489)
Q Consensus 315 ~~~~-~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 384 (489)
++++ .+.+ .+.......++..++.+++|+++||+++|+... ...+...++. ......... ..... +.
T Consensus 287 ~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~ 363 (465)
T TIGR00894 287 FISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPY-LSAAF--YL 363 (465)
T ss_pred HHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-cCCch--HH
Confidence 4433 3443 355666678888999999999999986543210 0001111111 111111111 01111 11
Q ss_pred HHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--C-CchhHHHHHHHHHH
Q 011275 385 SVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL--G-PQLLYSIFGTFCLM 461 (489)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g-~~~~~~~~~~~~~~ 461 (489)
.+..+.+.... ..+..+.......|..| +.++...++.+..+.+++.++|.+.+.+.+.. + +...|.+.++++++
T Consensus 364 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i 441 (465)
T TIGR00894 364 TIIILTLANAV-SSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNIL 441 (465)
T ss_pred HHHHHHHHHHH-hhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHH
Confidence 11112211111 11112233344557766 58999999999999999999998877665532 2 45567777766666
Q ss_pred HHHHH
Q 011275 462 AVAFV 466 (489)
Q Consensus 462 ~~~~~ 466 (489)
+.++.
T Consensus 442 ~~i~~ 446 (465)
T TIGR00894 442 CVIFY 446 (465)
T ss_pred HHHHe
Confidence 65543
No 48
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=1.2e-26 Score=229.84 Aligned_cols=361 Identities=14% Similarity=0.110 Sum_probs=236.3
Q ss_pred HHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHH
Q 011275 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (489)
Q Consensus 53 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~ 132 (489)
....+++.++.+.+....+..+|.+.+++|++.+ +.++..+.+.+++.+++++.|+++||+|||+++..+.++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~--~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 86 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMVMGPIAEYFNLPVS--SMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAV 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3455666777788777888899999999988744 56889999999999999999999999999999999999999999
Q ss_pred HHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccc-cCCchhHHHH
Q 011275 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK-EIAGWWRICF 211 (489)
Q Consensus 133 ~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~-~~~~~wr~~f 211 (489)
.+.+++++++.+++.|+++|++.|...+....++.|++|+++|++..+.......+|..+++.+...+. +..+ ||+.|
T Consensus 87 ~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g-w~~~f 165 (394)
T PRK03699 87 AGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIE-WYWVY 165 (394)
T ss_pred HHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-HHHHH
Confidence 999999999999999999999999888888899999999999999998888777777666666654433 3334 79999
Q ss_pred HHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHH
Q 011275 212 WVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (489)
Q Consensus 212 ~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (489)
+...+..++..++.++ .+.|+ .++.++ + + ++.. .+.. .++..+...
T Consensus 166 ~~~~~~~~~~~~~~~~-~~~p~----~~~~~~----------~-----------~-~~~~--~~~~-----~~~~~~~~~ 211 (394)
T PRK03699 166 ACIGLVYVAIFILTLF-SEFPA----LGKHAP----------K-----------A-DKPV--AKEK-----WGIGVLFLA 211 (394)
T ss_pred HHHHHHHHHHHHHHHh-cCCcc----ccccCc----------c-----------c-cCcc--cccc-----CChHHHHHH
Confidence 8765555444333222 22221 000000 0 0 0000 0000 011222222
Q ss_pred HHHHHHHHHhhhhHHHHHHhHHHHHH-hcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHH
Q 011275 292 IGSTLFALQQLSGINAIFYFSSSVFK-SAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 367 (489)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 367 (489)
....++.. .......|.|.+++ ..+.+. +.......++..+|.++.++++||++||+.+........+....
T Consensus 212 ~~~~~~~~----~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 287 (394)
T PRK03699 212 IAALLYIL----AQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYL 287 (394)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Confidence 22222211 11223344555453 345543 44555667788999999999999999998876654443333222
Q ss_pred HHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011275 368 QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 447 (489)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 447 (489)
.... .+... ..+ ..+..+... .+..+....+..|..| +.+++..+......++++.++|.+.+.+.+..|
T Consensus 288 ~~~~-----~~~~~--~~~-~~~~~G~~~-~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g 357 (394)
T PRK03699 288 FVNT-----DDPSH--LLY-AILGLGFFS-SAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG 357 (394)
T ss_pred HHHc-----CCchH--HHH-HHHHHHHHH-HHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC
Confidence 2111 11111 111 111111111 1122333345667666 446778889999999999999999999988888
Q ss_pred CchhHHHHHHHHHHHHH
Q 011275 448 PQLLYSIFGTFCLMAVA 464 (489)
Q Consensus 448 ~~~~~~~~~~~~~~~~~ 464 (489)
+...+.+.+.+++++.+
T Consensus 358 ~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 358 LQAALLTANGLYAVVFV 374 (394)
T ss_pred chhhhhhhHHHHHHHHH
Confidence 87777666666555543
No 49
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=9.4e-27 Score=230.07 Aligned_cols=341 Identities=19% Similarity=0.205 Sum_probs=228.7
Q ss_pred HHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHH
Q 011275 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (489)
Q Consensus 57 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~ 136 (489)
....+......+...+.+|.+.+|+|.+.+ +.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~--~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~ 88 (385)
T TIGR00710 11 GCLSILGPLGIDMYLPAFPEIAADLSTPAS--IVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLA 88 (385)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 333455566677788899999999988654 568999999999999999999999999999999999999999999999
Q ss_pred hcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHH
Q 011275 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (489)
Q Consensus 137 ~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~ 216 (489)
.+++++.+++.|++.|++.+...+....++.|++|+++|++..++.+....+|..+++.++..+.+..+ ||+.|++..+
T Consensus 89 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~~~~~~ 167 (385)
T TIGR00710 89 LSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHAIFAFLSL 167 (385)
T ss_pred HHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998888888877666555 7998887555
Q ss_pred HHHHHHH-HhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHH
Q 011275 217 PAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGST 295 (489)
Q Consensus 217 ~~~~~~~-~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (489)
..++..+ ..+..||+++. ++.++.+ +. ...+++.+++++++.......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~----~~~~~~~-------------~~--------------~~~~~~~~~~~~~~~~~~~~~ 216 (385)
T TIGR00710 168 AGILLSALIFFILPETLPY----EARIQIS-------------TY--------------FETFLLLLKSKMFWGYALIYG 216 (385)
T ss_pred HHHHHHHHHHHhCCCCCCC----cccCCHH-------------HH--------------HHHHHHHHcCchhHHHHHHHH
Confidence 4444333 33456665421 0000000 00 011233444444443332222
Q ss_pred HHHHHhhhhHHHHHHhHHHHH-HhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHH
Q 011275 296 LFALQQLSGINAIFYFSSSVF-KSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 371 (489)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~ 371 (489)
.... .......+.+..+ +..+.+. +.......++..++.++.+++.||+|+|+.+..+.....++.......
T Consensus 217 ~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (385)
T TIGR00710 217 ASFG----GFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEIT 292 (385)
T ss_pred HHHH----HHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1112222233333 2344443 345566778889999999999999999998877766555554443322
Q ss_pred hhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 011275 372 SSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFL 440 (489)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~ 440 (489)
.... ... ....+....+++.+... ..+....+..|.+| +.|+++.++.+...+.++.+.+...+
T Consensus 293 ~~~~--~~~-~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 293 AILG--LGS-WAMIIGPMMFVGIGNSM-ISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHhc--cch-HHHHHHHHHHHHHHHHH-HHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 011 11111111222222221 22344456678877 67999999999888877766666655
No 50
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=1.4e-26 Score=229.34 Aligned_cols=353 Identities=21% Similarity=0.219 Sum_probs=214.9
Q ss_pred hhhccceeeccchhhhhhhcCCCCchhHHHHHH--HHHHH---HHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHH
Q 011275 62 LFGYHLGVVNEPLESISLDLGFNGNTLAEGLVV--SMCLG---GAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (489)
Q Consensus 62 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--s~~~~---g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~ 136 (489)
.+.+|...++...+.+.+++..+.++.+.+... +.+.. +..+++++.|+++||+|||+++..+.+++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~ 83 (394)
T TIGR00883 4 VEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIG 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 344444445555556666654322222333333 33333 3347999999999999999999999999999999999
Q ss_pred hcchHH--------HHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccc-------
Q 011275 137 TTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK------- 201 (489)
Q Consensus 137 ~~~~~~--------~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~------- 201 (489)
++++++ .+++.|+++|++.+...+....++.|++|+++|++..++.+.+..+|..++++++..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~ 163 (394)
T TIGR00883 84 LLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDA 163 (394)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 999876 47889999999999999999999999999999999999999999999888877654322
Q ss_pred -cCCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHH
Q 011275 202 -EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEE 280 (489)
Q Consensus 202 -~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (489)
+..+ ||+.|++..+..++..+.....||+|++...+++ + +....+.++
T Consensus 164 ~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~--~~~~~~~~~ 212 (394)
T TIGR00883 164 LLEWG-WRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK----------------------------H--KKKRGPIRE 212 (394)
T ss_pred hhccc-hHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc----------------------------c--ccccCCHHH
Confidence 1234 7999988766555554444556776543111000 0 000112333
Q ss_pred hhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHH-HhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHH
Q 011275 281 LLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF-KSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQW 356 (489)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~ 356 (489)
.+++++.+ ............. .......+.+.++ +..+.+. +.......++..++.++.+++.||+|||+.+..
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 290 (394)
T TIGR00883 213 TLTKHRKP-FLLGLGLVIATTT-TFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLII 290 (394)
T ss_pred HHHhchHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 44433311 1111111111111 1122223334333 3344433 344556678888999999999999999997664
Q ss_pred hhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHH-HHHHHHH
Q 011275 357 SFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVH-WVINFFV 435 (489)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~~~~~~ 435 (489)
......+........... ... .+......+........ ..+....+.+|.+|++.|+++.++...+. .+++.++
T Consensus 291 ~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~ 365 (394)
T TIGR00883 291 FTVLAALLAVPLLMALLD--SGS--FTLFFFLVLGLALIGGM-YTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFA 365 (394)
T ss_pred HHHHHHHHHHHHHHHHhc--CCc--hHHHHHHHHHHHHHHHH-HhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHH
Confidence 433333222111111110 111 11111222222222222 23445668899999999999999865554 4677788
Q ss_pred HHHHHHHHHHhC-CchhH
Q 011275 436 GLLFLRLLEQLG-PQLLY 452 (489)
Q Consensus 436 ~~~~~~~~~~~g-~~~~~ 452 (489)
|.+.+.+.+..| +...+
T Consensus 366 p~~~g~l~~~~g~~~~~~ 383 (394)
T TIGR00883 366 PYIAAALVAMTGDWYAIG 383 (394)
T ss_pred HHHHHHHHHHcCcchhHH
Confidence 888888888777 44333
No 51
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.96 E-value=7.1e-26 Score=222.40 Aligned_cols=352 Identities=16% Similarity=0.109 Sum_probs=218.3
Q ss_pred cceeeccchhhhhh-hcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc-----c
Q 011275 66 HLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-----R 139 (489)
Q Consensus 66 ~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~-----~ 139 (489)
.....++..+.+.+ |+|++.+ +.+++.+++.+++.++.++.|++.||+|.|+++..+.+++++.+++.+++ +
T Consensus 49 ~w~~~~~l~~~~~~~~~~ls~~--q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~ 126 (462)
T PRK15034 49 VWMLFSAVTVNLNKIGFNFTTD--QLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNT 126 (462)
T ss_pred HHHHHHHHHHHhhhhhcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCC
Confidence 34455666666655 7888755 56899999999999999999999999999999999999999999999987 8
Q ss_pred hHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHH----HHHHhh-ccccc------------
Q 011275 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLM----GSLLIG-IPVKE------------ 202 (489)
Q Consensus 140 ~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~----~~~~~~-~~~~~------------ 202 (489)
+++.+++.|++.|++ |..++.....+++++|+++||++.++.....++|.. ++|.+. ..+..
T Consensus 127 s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g 205 (462)
T PRK15034 127 PFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADG 205 (462)
T ss_pred CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 999999999999998 678888889999999999999999999644445543 333321 11101
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhhcc-cCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHh
Q 011275 203 IAGWWRICFWVSIVPAAILCLAMVFC-AESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEEL 281 (489)
Q Consensus 203 ~~~~wr~~f~~~~~~~~~~~~~~~~~-pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (489)
...|||...++-.++.++..++.++. ++.|. .+. +.....+.
T Consensus 206 ~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-----~~~--------------------------------~~~~~~~v 248 (462)
T PRK15034 206 SVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-----SRA--------------------------------SIADQLPV 248 (462)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-----ccc--------------------------------CHHHHHHH
Confidence 01237777766544444444333332 22211 000 00112335
Q ss_pred hhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcc--hHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhH
Q 011275 282 LYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG--LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 359 (489)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~ 359 (489)
+++++.|......++ .+..+....++.|.+.+..--... .......+...+..+++|+++||+|+|+++.+++.
T Consensus 249 lk~~~~Wllslly~~----tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i 324 (462)
T PRK15034 249 LQRLHLWLLSLLYLA----TFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFI 324 (462)
T ss_pred hCCCchhHHHHHHHH----HHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHH
Confidence 555665554433222 222233333344433332110111 12233346667777899999999999999888877
Q ss_pred HHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCc---------------------hhhh
Q 011275 360 SMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPS---------------------RIRA 418 (489)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---------------------~~r~ 418 (489)
.+.++.......... ............++......++|.+.+. -++++.||+ +.-|
T Consensus 325 ~~~i~~~~~~l~lp~--~~~~~~~~~~~~~~~l~~~~G~gngsvf-k~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g 401 (462)
T PRK15034 325 FMAIFSALLFLTLPG--TGSGNFIAFYAVFMGLFLTAGLGSGSTF-QMIAVIFRQITIYRVKMKGGSDEQAQREAVTETA 401 (462)
T ss_pred HHHHHHHHHHHHhcc--ccccHHHHHHHHHHHHHHHhcccchHHH-HhhHHHHhhhhhhcccccccchhHHhhHHHHHHH
Confidence 666655433222111 1111122222222222223333333333 367777774 1577
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHH
Q 011275 419 KAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVA 464 (489)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~ 464 (489)
...|++..++.+|+++.|..++...+..| +...|.++.+.++++..
T Consensus 402 ~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 448 (462)
T PRK15034 402 AALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVL 448 (462)
T ss_pred HHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 88899999999999999988887777655 34455555555555443
No 52
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=2.4e-26 Score=227.70 Aligned_cols=338 Identities=19% Similarity=0.192 Sum_probs=214.9
Q ss_pred ceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHH
Q 011275 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (489)
Q Consensus 67 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~ 146 (489)
.+...+++|.+.+++|.+.+ +.++..+.+.++..+++++.|+++||+|||+++..+.+++.++..++..+++++.+++
T Consensus 19 ~~~~~~~lp~~~~~~~~s~~--~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 96 (392)
T PRK10473 19 IDMYLVGLPRIAADLNASEA--QLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLA 96 (392)
T ss_pred HHHHhhhHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 34455789999999887644 5678999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHH-Hh
Q 011275 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL-AM 225 (489)
Q Consensus 147 ~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~ 225 (489)
.|+++|++.+...+....++.|++|+++|++..++.+....+|..++++++..+.+..+ ||+.|++..+..++..+ ..
T Consensus 97 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g-~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 97 GRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP-WQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-hHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888999999999999999999999888888888888776655555 79988876554444333 34
Q ss_pred hcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhH
Q 011275 226 VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGI 305 (489)
Q Consensus 226 ~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (489)
+..||++. +++.++ .+ .....++.+++++++.......+.....
T Consensus 176 ~~~~~~~~----~~~~~~-~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 219 (392)
T PRK10473 176 FILKETRP----ARAPAA-SS---------------------------KPRENSESLLNRFFLSRLVITTLSVTVI---- 219 (392)
T ss_pred HHcCCCCC----cccCCc-cc---------------------------hHHHHHHHHhCHHHHHHHHHHHHHHHHH----
Confidence 55677632 000000 00 0001122333333332222111111111
Q ss_pred HHHHHhHHHH-HHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchh
Q 011275 306 NAIFYFSSSV-FKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 381 (489)
Q Consensus 306 ~~~~~~~~~~-~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (489)
.....+.+.. .+..+.+. +......+++..++.++.+++.||+|||+....+.....++.......... .
T Consensus 220 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~- 293 (392)
T PRK10473 220 LTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSH-----A- 293 (392)
T ss_pred HHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH-----H-
Confidence 1111122222 23345543 344566778888999999999999999998877766555554443332111 0
Q ss_pred hHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Q 011275 382 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGT 457 (489)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 457 (489)
. ..........++..+.+. ....++.|.+.|+ +...+...++..+++.+.+.+.+..|......+.+.
T Consensus 294 ~--~~~~~~l~~~g~~~~~~~---~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 294 V--SLFGITLICAGFSVGFGV---AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGI 361 (392)
T ss_pred H--HHHHHHHHHHHHHHHhHH---HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH
Confidence 1 111111212222222111 2344555655554 333344445556666666666677776543334443
No 53
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=3.6e-26 Score=222.58 Aligned_cols=340 Identities=27% Similarity=0.388 Sum_probs=252.6
Q ss_pred HHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHH
Q 011275 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (489)
Q Consensus 56 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~ 135 (489)
+.+..+..+.+....++..|.+.++++.+. .+.++..+...++..+++++.|+++||+|||+.+..+.++..++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDLGLSA--SQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHcCCCH--HHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHH
Confidence 344556667777778888899999887654 456889999999999999999999999999999999999999999999
Q ss_pred HhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHH
Q 011275 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (489)
Q Consensus 136 ~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~ 215 (489)
..+++++.+++.|++.|++.+...+....++.|++|+++|++..++......+|..+++.++..+.+..+ ||+.+++..
T Consensus 82 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~ 160 (352)
T cd06174 82 AFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG-WRWLFLILA 160 (352)
T ss_pred HHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999988877766555 799988766
Q ss_pred HHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHH
Q 011275 216 VPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGST 295 (489)
Q Consensus 216 ~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (489)
+..++..+...+.+ +..+.......
T Consensus 161 ~~~~~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~~ 185 (352)
T cd06174 161 ILGLLLALLLLFLL-------------------------------------------------------RLLLLLALAFF 185 (352)
T ss_pred HHHHHHHHHHHHHH-------------------------------------------------------HHHHHHHHHHH
Confidence 55555444333221 00111111111
Q ss_pred HHHHHhhhhHHHHHHhHHHHHHhc-CCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCch-hHHHhhHHHHHHHHHHHH
Q 011275 296 LFALQQLSGINAIFYFSSSVFKSA-GLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKA-LLQWSFFSMAVSMAIQVA 370 (489)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~-~~~~~~~~~~~~~~~~~~ 370 (489)
.. .........+.+...++. +.+ .+.......++..++.++.+++.||+|||+ .+..+.....++......
T Consensus 186 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 261 (352)
T cd06174 186 LL----SFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL 261 (352)
T ss_pred HH----HhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 11 111222223333333332 333 345667778899999999999999999999 877776666665554432
Q ss_pred HhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Q 011275 371 ASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQL 450 (489)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 450 (489)
.. + .+.......+...... ...+....+..|..|++.|++..++.+...+++..+++.+.+.+.+..++..
T Consensus 262 ~~-----~---~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~ 332 (352)
T cd06174 262 AP-----S---LALLLVALLLLGFGLG-FAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGG 332 (352)
T ss_pred hc-----c---HHHHHHHHHHHHHHHh-ccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcch
Confidence 21 1 1111122222222222 3356677789999999999999999999999999999999988888888888
Q ss_pred hHHHHHHHHHHHHHHH
Q 011275 451 LYSIFGTFCLMAVAFV 466 (489)
Q Consensus 451 ~~~~~~~~~~~~~~~~ 466 (489)
.+.+.+++.+++.+..
T Consensus 333 ~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 333 VFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8888888887776654
No 54
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.95 E-value=5.8e-26 Score=223.65 Aligned_cols=358 Identities=15% Similarity=0.118 Sum_probs=228.6
Q ss_pred HHhhhhccceeeccchhhh-hhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHH-hHHHHHHHHHHHH
Q 011275 59 SSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL-CALPMIIGASISA 136 (489)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~-~~~~~~i~~~l~~ 136 (489)
.+++.+...++..+.+|.. .+++|.+. .+.|++.+.+.++..+.+++.|+++||+|||+.+.. +.++..++.++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~--~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARP--AMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 3455666667777878764 56788764 456899999999999999999999999999887654 5566667788889
Q ss_pred hcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhh--hhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHH
Q 011275 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTY--GAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (489)
Q Consensus 137 ~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~--~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~ 214 (489)
.++|++.+++.|++.|.+.+...+....++.|+.|+++|++. .+.......+|..++++++..+.+..+ ||+.|++.
T Consensus 83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~-~~~~f~~~ 161 (375)
T TIGR00899 83 WNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG-FTVMFLTA 161 (375)
T ss_pred hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc-cHHHHHHH
Confidence 999999999999999988777777777888999888877754 577777788888888888777665555 79999987
Q ss_pred HHHHHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHH
Q 011275 215 IVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (489)
Q Consensus 215 ~~~~~~~~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (489)
++..++..+. .+++||+|+.. +.++. ..+.++.+++++++.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~------------------------------~~~~~~~~~~~~~~~~~~~ 207 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPSYPRGA----PGALT------------------------------RLEVRGLLASRDTRLLFVA 207 (375)
T ss_pred HHHHHHHHHHHHHhCCCcccCc----ccccC------------------------------cchhhhhhcCcchHHHHHH
Confidence 6655544433 44578876420 00000 0001112333444433332
Q ss_pred HHHHHHHhhhhHHHHHHhHHHHHHhcCCCcc---hHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHH
Q 011275 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVA 370 (489)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 370 (489)
..+............+. ...+..+.+.. .......+...++.++.+++.||+|||+.+..+.....+.......
T Consensus 208 ~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 284 (375)
T TIGR00899 208 CTLMWGCNILYIINMPL---LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA 284 (375)
T ss_pred HHHHHHHHHHHHhhhHH---HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 22221111111111111 22233444433 3333344556677889999999999999876655443332222111
Q ss_pred HhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Q 011275 371 ASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQL 450 (489)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 450 (489)
.. + .+.......+.....+. ..+....+..|..|++ |+++.++.+...+++..+++.+.+.+.+..|+..
T Consensus 285 ~~-----~---~~~~~~~~~~~g~~~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~ 354 (375)
T TIGR00899 285 DN-----S---LWALLMLQLLNAIFIGI-LAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHA 354 (375)
T ss_pred HH-----H---HHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 11 1 11111111222222221 2344556778988865 5699999999999999999999888888888888
Q ss_pred hHHHHHHHHHHHHHHH
Q 011275 451 LYSIFGTFCLMAVAFV 466 (489)
Q Consensus 451 ~~~~~~~~~~~~~~~~ 466 (489)
.+.+.+++++++.+..
T Consensus 355 ~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 355 VYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8887777776665544
No 55
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.95 E-value=9.5e-26 Score=224.77 Aligned_cols=373 Identities=17% Similarity=0.125 Sum_probs=240.9
Q ss_pred HHHHHHhhhhccceeeccchhhhhhhcCCCCchh---HHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHH
Q 011275 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTL---AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (489)
Q Consensus 55 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~ 131 (489)
.+.++.++.+...+...+.+|.+.+|+|.+..+. ..+++.+.+.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 97 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIV 97 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHH
Confidence 4455666667777778889999999998875542 2478888999999999999999999999999999999999999
Q ss_pred HHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHH
Q 011275 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (489)
Q Consensus 132 ~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f 211 (489)
..+.+.+++++.+++.|++.|++.+ ..+....++.|.+|+++|++..+++.....+|..+++.++..+.+..+ ||+.|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~ 175 (408)
T PRK09874 98 MVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG-LRPVF 175 (408)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHH
Confidence 9999999999999999999999865 456667788999999999999999999999998888888777665555 79998
Q ss_pred HHHHHHHHHHHH-HhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHH
Q 011275 212 WVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (489)
Q Consensus 212 ~~~~~~~~~~~~-~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (489)
++..+..++..+ ..++.+|.++. .++ ++ +.. .. ...+.+++++....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~-~~~-------------~~--------------~~~~~~~~~~~~~~ 223 (408)
T PRK09874 176 FITASVLFLCFLVTLFCIRENFQP---VSK-KE-MLH-------------MR--------------EVVTSLKNPKLVLS 223 (408)
T ss_pred HHHHHHHHHHHHHHHHHhccCccc---ccc-hh-hhH-------------HH--------------HHHHhCcCCchHHH
Confidence 876555444333 33445554310 000 00 000 00 01111222222221
Q ss_pred H-HHHHHHHHHhhhhHHHHHHhHHHHHHhcCC---CcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHH
Q 011275 291 F-IGSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMA 366 (489)
Q Consensus 291 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 366 (489)
. ...................|..+..+.... ..+......+++..++.+..+++.||+|||+.+..+.....+..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 303 (408)
T PRK09874 224 LFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLI 303 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Confidence 1 111111111000001111121111111100 012233345677778888899999999999988776554444333
Q ss_pred HHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011275 367 IQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL 446 (489)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (489)
..... .+ . +.......+.+.+.+ ...|....+..+..|++.|++..++...+..++..++|.+.+.+.+..
T Consensus 304 ~~~~~-----~~-~--~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~ 374 (408)
T PRK09874 304 PMSFV-----QT-P--LQLGILRFLLGAADG-ALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY 374 (408)
T ss_pred HHHHh-----cc-H--HHHHHHHHHHHhhhH-hhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc
Confidence 22211 11 1 111111122222221 122334445667789999999999999999999999999888888888
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhc
Q 011275 447 GPQLLYSIFGTFCLMAVAFVKRNV 470 (489)
Q Consensus 447 g~~~~~~~~~~~~~~~~~~~~~~~ 470 (489)
|+...|.+.+++.+++.++..+..
T Consensus 375 g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 375 GFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888877776655443
No 56
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.95 E-value=4.6e-28 Score=228.20 Aligned_cols=365 Identities=18% Similarity=0.197 Sum_probs=234.0
Q ss_pred HHHHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHH
Q 011275 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (489)
Q Consensus 50 ~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~ 129 (489)
+..++++++.+.+...|-..+....+.++..+|++++ ..|++.+.+.+.+.+.+++.|+|+|||.||+++..+..+|+
T Consensus 32 ~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s--~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~ 109 (493)
T KOG1330|consen 32 TLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDS--ELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWT 109 (493)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCch--hccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHH
Confidence 4456777888888777777677788999999998765 45899999999999999999999999999999999999999
Q ss_pred HHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHH
Q 011275 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (489)
Q Consensus 130 i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~ 209 (489)
++.++++++..|++++++|.+.|+|.+...++++.+++|.+|..+|+++.++++++..+|..+|.+.|..+.+..+||||
T Consensus 110 ~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~ 189 (493)
T KOG1330|consen 110 LAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRW 189 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHh-hcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchh
Q 011275 210 CFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (489)
Q Consensus 210 ~f~~~~~~~~~~~~~~-~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (489)
.|+..++..++..++. ++++|.++ +..+|...+ . +..+.........+...+.+.++
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~r-----ga~~~~~~~-------~----------~~~~~~ts~~kDl~~l~~~~v~v 247 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPER-----GARDEVDGE-------N----------KMVKPFTSVWKDLKVLAKIKVFV 247 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCccc-----ccccccccC-------C----------cCCCCccchHHHHHHHHccCcee
Confidence 9998776666655544 45566432 211111100 0 00000001111122222223333
Q ss_pred HHHHHHHH--HHHHhhhhHHHHHHhHHHHHHhcCCC--cc-hHHHHHHHHHHHHHHHHHHHHhhcCCc----hhHHHh--
Q 011275 289 VVFIGSTL--FALQQLSGINAIFYFSSSVFKSAGLS--SG-LANVFVGIANLLGSVVAMVLMDKLGRK----ALLQWS-- 357 (489)
Q Consensus 289 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~i~~~~g~~~~g~l~dr~grr----~~~~~~-- 357 (489)
...++... +.+..+.... +-+.+..+...+.+ .+ +.......+..+|.+++|.++||+-|+ ......
T Consensus 248 ~~sl~~~a~~fv~Gs~sww~--p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~ 325 (493)
T KOG1330|consen 248 LSSLGIIAAQFVIGSLSWWA--PAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQL 325 (493)
T ss_pred eehHHHHHHHHhccccchhh--hhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHH
Confidence 33222222 1112222111 11122222222222 23 344555678888999999999985331 111111
Q ss_pred --hHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHH-hcCccccccccccccCCchhhhhHHHHHHHHHHHHHHH
Q 011275 358 --FFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTF-ALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFF 434 (489)
Q Consensus 358 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~ 434 (489)
.+....+..++..... ......+..+.. +..+... ..+..+ ...+..|+.|+++|+++.++...+..+.+-.
T Consensus 326 ~~~~g~~~s~~~L~~~~~---~~~~s~~~~~il-~~~g~~~~~~~~a~-n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~ 400 (493)
T KOG1330|consen 326 SAALGAPLSIPFLFLFPA---FTSSSMIFGLIL-FLVGETISWFNWAT-NNPIFLEVVPPSRRTTAYALDTVFEHIFGDA 400 (493)
T ss_pred HHhhhhhHHHHHHHHHHh---hhhHHHHHHHHH-HHHHHHHHhccccc-ccceeeEecCcccccHHHHHHHHHHHHhccC
Confidence 1111111111111111 111222222222 2222222 222232 3346789999999999999998886665444
Q ss_pred -HHHHHHHHHHH
Q 011275 435 -VGLLFLRLLEQ 445 (489)
Q Consensus 435 -~~~~~~~~~~~ 445 (489)
.|.+.+.+.+.
T Consensus 401 ~~p~ivGilsd~ 412 (493)
T KOG1330|consen 401 ASPYIVGILSDK 412 (493)
T ss_pred CCcceehhHHHH
Confidence 34355555554
No 57
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.95 E-value=5.8e-26 Score=224.42 Aligned_cols=365 Identities=15% Similarity=0.082 Sum_probs=230.9
Q ss_pred HHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHH
Q 011275 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (489)
Q Consensus 57 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~ 136 (489)
.++.++.....+......+.+.+|++.+ +.+.+++.+.+.+++.+++++.|+++||+|||+++..+.+++++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 9 MAAQFFSALADNALLFAAIALLKELHYP--DWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCc--HHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 4445555554333445555667787765 34568999999999999999999999999999999999999999988887
Q ss_pred hcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHH
Q 011275 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (489)
Q Consensus 137 ~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~ 216 (489)
++.+. ++.|+++|++.+...|...+++.|++|+++|++++++.+....+|..+||.+++.+.+.. |+..+.+...
T Consensus 87 ~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~--~~~~~~i~~~ 161 (393)
T PRK11195 87 FGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH--AEAALAVCAL 161 (393)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 77664 788999999999999999999999999999999999999999999999999988776532 5666665444
Q ss_pred HHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHH
Q 011275 217 PAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTL 296 (489)
Q Consensus 217 ~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (489)
..++..+..+.+||+|... +++.++..+. .++.. ...+.+++++..+.......+
T Consensus 162 ~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~-------------~~~~~----------~~~~~l~~~~~~~~~~~~~~~ 216 (393)
T PRK11195 162 IYLLAALFNLFIPRLGARR--PGQSWNPIAL-------------LRDFF----------HACRVLWRDKLGRFSLAGTTL 216 (393)
T ss_pred HHHHHHHHHhcCCCCcccc--cccCCCHHHH-------------HHHHH----------HHHHHHHhCchhHHHHHHHHH
Confidence 3344444456678875321 1010000000 00000 012334555554443332222
Q ss_pred HHHHhhhhHHHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccC
Q 011275 297 FALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYI 376 (489)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (489)
............+.|.+..++......|......+++.+++++..+++.||.++|+.+..+.. .++........
T Consensus 217 ~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~----- 290 (393)
T PRK11195 217 FWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQ----- 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHH-----
Confidence 211111111122233343333333335567777889999999999999999998887666532 22222211111
Q ss_pred CCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Q 011275 377 PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRI-RAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIF 455 (489)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 455 (489)
+ ..+..+....+.+.+......|. .....|..|++. ++++.++.+...+++..++..+.. ..+..|....+.+.
T Consensus 291 -~--~~~~~~~~~~~~G~~~g~~~~~~-~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 365 (393)
T PRK11195 291 -H--SLLPAYPLLILIGALGGFFVVPM-NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYS-LLVKLGVPVVAVIV 365 (393)
T ss_pred -h--HHHHHHHHHHHHHHhhhhhhhhH-HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHH-HHHHcCCCHHHHHH
Confidence 1 11111122222223322222333 334567666655 799999999999998888877665 44677777766665
Q ss_pred HHHHHHHHH
Q 011275 456 GTFCLMAVA 464 (489)
Q Consensus 456 ~~~~~~~~~ 464 (489)
+...+....
T Consensus 366 ~~~~~~~~~ 374 (393)
T PRK11195 366 GFGLLVALA 374 (393)
T ss_pred HHHHHHHHH
Confidence 554444443
No 58
>PRK11043 putative transporter; Provisional
Probab=99.95 E-value=1.3e-25 Score=223.26 Aligned_cols=335 Identities=20% Similarity=0.191 Sum_probs=221.1
Q ss_pred ccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHH
Q 011275 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGM 144 (489)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l 144 (489)
...+++.+.+|.+.+++|.+.+ +.++..+.+.+++.++++++|+++||+|||+++..+.++..++.++++++++++.+
T Consensus 20 ~~~~~~~p~~~~i~~~~~~s~~--~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (401)
T PRK11043 20 LATDMYLPAFKAIQADLQTSAS--AVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQL 97 (401)
T ss_pred HHHHHHHhhHHHHHHHHCCCHH--HHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 4456677888999999988644 56899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHH
Q 011275 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (489)
Q Consensus 145 ~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 224 (489)
++.|+++|++.+...+....++.|++|+++|++..+.......+|..+++.++..+.+..+ ||+.|++..+..++..+.
T Consensus 98 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~ 176 (401)
T PRK11043 98 LVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFATLFAITLLLILP 176 (401)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHH
Confidence 9999999999887777777889999999999988888888888888888888777666666 799998766666555555
Q ss_pred hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhh
Q 011275 225 MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSG 304 (489)
Q Consensus 225 ~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (489)
.++++|+++ +++.++. ..++++.++++.++........... .
T Consensus 177 ~~~~~~~~~----~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~ 218 (401)
T PRK11043 177 TLRLKPSKK----ARKQSQD------------------------------ALTFKQLLKSKTYLGNVLIFAACSA----A 218 (401)
T ss_pred HHHcCCCCC----ccccchH------------------------------HHHHHHHHcChhHHHHHHHHHHHHH----H
Confidence 555555532 0000000 0112333433433322221111111 1
Q ss_pred HHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchh
Q 011275 305 INAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 381 (489)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (489)
......+.+.++++.+.+. +.......++..+|.++.+++.||+++|+.........+++........... ....
T Consensus 219 ~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 296 (401)
T PRK11043 219 FFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS-HPSL- 296 (401)
T ss_pred HHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc-cCcH-
Confidence 1112223344445555553 3344555677888899999999999998876555444444333222211111 1111
Q ss_pred hHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 382 LYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ 445 (489)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (489)
+..+..........+ ...|.......|..| +.|+++.|+.+.++..++..++.+.+.+.+.
T Consensus 297 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 297 -VPLLIPFCVMAAANG-AIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred -HHHHHHHHHHHHHHH-HHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 111111111122211 123333445556666 5799999999999888888888887776553
No 59
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=9.8e-27 Score=226.86 Aligned_cols=342 Identities=22% Similarity=0.354 Sum_probs=223.9
Q ss_pred HHHhhhhccceeeccchh-hhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHH
Q 011275 58 LSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (489)
Q Consensus 58 l~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~ 136 (489)
++.++...+.+...+.+| .+.+++|.+.+ +.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++..+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPS--QIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSH--CHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhh
Confidence 444566666667788888 88889887755 458999999999999999999999999999999999999999977777
Q ss_pred hcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHH
Q 011275 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (489)
Q Consensus 137 ~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~ 216 (489)
+++|++.+++.|++.|++.+...+....++.|++|+++|++..++......+|..++++++..+.+..+ ||+.|++.++
T Consensus 81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~~~~~ 159 (352)
T PF07690_consen 81 FASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRWAFLISAI 159 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCCHHHHHHH
T ss_pred hhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-cccccccccc
Confidence 768888999999999999999999999999999999999999999999999999999999888776656 7999988766
Q ss_pred HHHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcch-hHHHhhhccchhHHHHHH
Q 011275 217 PAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIV-KFEELLYGRHFRVVFIGS 294 (489)
Q Consensus 217 ~~~~~~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 294 (489)
..++..++ ..+.+|+|+....+++.++. . + +..+.. .++...+++..+......
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~-----------------~---~----~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE-----------------S---K----KPKPLKPGFKSLFKNPVLWILLIAF 215 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT--------------------------HHHCCCH-CTHHHHHHCCHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc-----------------c---c----cccccccccccccccchhhhhhhhh
Confidence 66665443 24455443210000000000 0 0 000001 133444444444222222
Q ss_pred HHHHHHhhhhHHHHHHhHHHH-HHhcCCC----cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHH
Q 011275 295 TLFALQQLSGINAIFYFSSSV-FKSAGLS----SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 369 (489)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 369 (489)
.+..... .....+.+.+ .+..+.+ .+.......+...++.++.+++.||+++|+..........+......
T Consensus 216 ~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (352)
T PF07690_consen 216 FLFFFVF----SGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLL 291 (352)
T ss_dssp HHHHHHH----HHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHH----HHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 2221111 1122223322 2233333 23345666677778899999999999998776555444444333322
Q ss_pred HHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHH
Q 011275 370 AASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVG 436 (489)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~ 436 (489)
..... . . .........+.+++... ..+....+..|.+|++.|+++.|+.+.+.++++.++|
T Consensus 292 ~~~~~---~-~-~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 292 LLPFS---S-S-PVWLIIALFLIGFGFGI-VFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp CSHHH---C-H-HHHHHHHHHHHHHHHHH-HCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHh---h-h-HHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 11110 0 1 11111122222232221 2456667889999999999999999999999888776
No 60
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=2.6e-26 Score=231.16 Aligned_cols=372 Identities=16% Similarity=0.153 Sum_probs=226.5
Q ss_pred eeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHH-
Q 011275 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL- 146 (489)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~- 146 (489)
..++..+|.+.+++|.+.+ +.++..+.+.++..++.++.|+++||+|||++++.+.+++++++++++++++++.+++
T Consensus 36 ~~~~~~~~~i~~~~g~s~~--~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 113 (455)
T TIGR00892 36 KAVTVFFKELQQIFQATYS--ETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLT 113 (455)
T ss_pred cchhhhHHHHHHHhCcchh--HHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHH
Confidence 3356678899999998755 4578899999999999999999999999999999999999999999999999998865
Q ss_pred HHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhh
Q 011275 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (489)
Q Consensus 147 ~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 226 (489)
.|+++|++.|...+....++.|++| ++|+++.++.+.+..+|..++++++..+.+..+ ||+.|++.++..++..+..+
T Consensus 114 ~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g-wr~~f~~~~~~~~~~~v~~~ 191 (455)
T TIGR00892 114 AGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG-WRGSFLILGGLLLHCCVCGA 191 (455)
T ss_pred HHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHH
Confidence 5799999998766666778889986 789999999999999998888877766655556 79999987655544433332
Q ss_pred c-ccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhH
Q 011275 227 F-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGI 305 (489)
Q Consensus 227 ~-~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (489)
+ .++.+.. .+.+ ++.+ ++.......++ .......++..+....+.++++.++.......+.....
T Consensus 192 ~~~~~~~~~--~~~~-~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---- 257 (455)
T TIGR00892 192 LMRPVGPSQ--RVSK-SKSK---EGLPPDGSTKK----LSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGF---- 257 (455)
T ss_pred HhCCCCccc--cccc-cccc---ccCCCCCcccc----ccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHc----
Confidence 2 2322110 0000 0000 00000000000 00000000000000123555555554443322222111
Q ss_pred HHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhc--CCchhHHHhhHHHHHHHHHHHHHhhccCCCch
Q 011275 306 NAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKL--GRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 380 (489)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~--grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (489)
.....+.+.+.++.+.+. +......+++.+++.++.+++.||. ++|+...........+...+.... ...
T Consensus 258 ~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~----~~~- 332 (455)
T TIGR00892 258 FAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL----AGD- 332 (455)
T ss_pred cchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH----hch-
Confidence 112223333444455543 3455566778888888999999984 333333222211111111111110 011
Q ss_pred hhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHH
Q 011275 381 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFC 459 (489)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~ 459 (489)
.+..+...+++++.+. ...+....+..|.+|++.+++++|+.+.+..++++++|.+.+.+.+..+ +...|.+.+++.
T Consensus 333 -~~~~~i~~~~~G~~~g-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~ 410 (455)
T TIGR00892 333 -YTGLVIYCIFFGLSFG-SVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIV 410 (455)
T ss_pred -HHHHHHHHHHHHHHhc-hHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHH
Confidence 1111112223333222 2234455678899999999999999999999999999998888877764 666777766665
Q ss_pred HHHHH
Q 011275 460 LMAVA 464 (489)
Q Consensus 460 ~~~~~ 464 (489)
+++.+
T Consensus 411 li~~~ 415 (455)
T TIGR00892 411 VSAGL 415 (455)
T ss_pred HHHHH
Confidence 55544
No 61
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.95 E-value=3.3e-25 Score=224.67 Aligned_cols=370 Identities=16% Similarity=0.155 Sum_probs=236.1
Q ss_pred HHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcc-----hhhHH-HHHhHHHHH
Q 011275 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRA-FQLCALPMI 129 (489)
Q Consensus 56 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~-----GRr~~-~~~~~~~~~ 129 (489)
+.+..+..|......+..+|...++.|.+.++. +.. +.....+ ++.+++|+++||+ |||+. +..+.++.+
T Consensus 17 ~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~i--g~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~ 92 (491)
T PRK11010 17 LLILGFASGLPLALTSGTLQAWMTVENIDLKTI--GFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLL 92 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH--HHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHH
Confidence 333445666677777888898988888765533 333 3333333 6889999999999 99986 557777777
Q ss_pred HHHHHHHhc---chHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhccccc-CCc
Q 011275 130 IGASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-IAG 205 (489)
Q Consensus 130 i~~~l~~~~---~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~ 205 (489)
++..+.++. .+++.+.+.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ..+
T Consensus 93 ~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~G 172 (491)
T PRK11010 93 VAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLG 172 (491)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 777777665 4688888999999999998888899999999999999999999999999998888887777665 345
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhcc
Q 011275 206 WWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGR 285 (489)
Q Consensus 206 ~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (489)
||..|++.++..++..+..++.||+++. +++.++.+ + ....++++.++++
T Consensus 173 -Wr~~f~i~a~l~ll~~l~~~~~~e~~~~---~~~~~~~~-------------~-------------~~~~~l~~~~~~~ 222 (491)
T PRK11010 173 -WQGMYWLMAALLIPCIIATLLAPEPTDT---IPVPKTLE-------------Q-------------AVVAPLRDFFGRN 222 (491)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCCccc---cccccchh-------------h-------------hHHHHHHHHHcCc
Confidence 7999998766666555555567886531 00000000 0 0001233445444
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcc---hHH-HHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHH
Q 011275 286 HFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG---LAN-VFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 361 (489)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~ 361 (489)
+.+.......++...... ...+..+...+..|.+.. ... ....++.++|.+++|+++||+|+|+.+..+.+..
T Consensus 223 ~~~~~ll~~~l~~~~~~~---~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~ 299 (491)
T PRK11010 223 NAWLILLLIVLYKLGDAF---AMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQ 299 (491)
T ss_pred CHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 444333322222211111 111222222344565543 333 2334688899999999999999988766554444
Q ss_pred HHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 011275 362 AVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLR 441 (489)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 441 (489)
++........... .... ..+ ....++....+.++. +....+..++.|++.+++..|+.+++..++..+++.+.+.
T Consensus 300 ~l~~l~~~~l~~~--~~~~-~~l-~~~~~l~~~~~g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~ 374 (491)
T PRK11010 300 GVSNAGYWLLSIT--DKNL-YSM-GAAVFFENLCGGMGT-AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGW 374 (491)
T ss_pred HHHHHHHHHHHhc--cccH-HHH-HHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433222211111 1111 111 111112111122222 2235577888999999999999999999998888888888
Q ss_pred HHHHhCCchhHHHHHHHHHHHHHHHH
Q 011275 442 LLEQLGPQLLYSIFGTFCLMAVAFVK 467 (489)
Q Consensus 442 ~~~~~g~~~~~~~~~~~~~~~~~~~~ 467 (489)
+.+..|+...|.+.+++++.+.+...
T Consensus 375 l~~~~G~~~~f~~~~~~~l~~l~~~~ 400 (491)
T PRK11010 375 FVEAHGWPTFYLFSVAAAVPGLLLLL 400 (491)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 88988988888877777777655554
No 62
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.95 E-value=1.5e-24 Score=215.44 Aligned_cols=356 Identities=13% Similarity=0.087 Sum_probs=221.0
Q ss_pred eeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHH---h-cchHHHH
Q 011275 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA---T-TRNLIGM 144 (489)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~---~-~~~~~~l 144 (489)
.....++.+.+|+|.+.+ +.++..+.+.+++.+++++.|+++||+|||+++..+.+++++++.++. . ..+++.+
T Consensus 31 ~~~~~~~~~~~~~g~s~~--~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (402)
T TIGR00897 31 LEQGWLSPFLKALGLSPQ--QSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLI 108 (402)
T ss_pred hHHHhHHHHHHHhCCCHH--HhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHH
Confidence 344456667788887644 568999999999999999999999999999999999999988876653 3 3578888
Q ss_pred HHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHH-HHHHHhhcccccCCchhHHHHHHHHHHHHH-HH
Q 011275 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGL-MGSLLIGIPVKEIAGWWRICFWVSIVPAAI-LC 222 (489)
Q Consensus 145 ~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~ 222 (489)
++.|+++|++.+...+....++.|++|+++|++++++++.+..+|. ..+++++..+.+..+| +..+|.......+ ..
T Consensus 109 ~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~-~~~~~~~~~~~~~~~~ 187 (402)
T TIGR00897 109 LLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGE-MNTLWSALAFVLTGGV 187 (402)
T ss_pred HHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccch-HHHHHHHHHHHHHHHH
Confidence 8999999999888777777788999999999999999999999996 5778777665555553 3333322111111 11
Q ss_pred HHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhh
Q 011275 223 LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQL 302 (489)
Q Consensus 223 ~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (489)
+..++.++.++ +++.++ +++. ++ ....+++++++++++.......+...
T Consensus 188 ~~~~~~~~~~~-------~~~~~~-------~~~~----~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~--- 236 (402)
T TIGR00897 188 IALFSNKDIFT-------PQHMQT-------REKF----SE----------LGKAATILFTNPNVLLGGMVRIINTI--- 236 (402)
T ss_pred HHHhccCCCCC-------cccccC-------Ccch----hh----------HHHHHHHHHcChhHHHHHHHHHHHHH---
Confidence 22222333210 000000 0000 00 00113345555555544333222211
Q ss_pred hhHHHHHHhHHHHHHhcCCCcc---hHHHHHHHHHHHHHHHHHHHHhhcCCchhHH-HhhHHHHHHHHHHHHHhhccCCC
Q 011275 303 SGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQ-WSFFSMAVSMAIQVAASSSYIPG 378 (489)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 378 (489)
.......+.|.+.++.+.+.. .......++..++++..|+++||++||+... .+.+...++........... .+
T Consensus 237 -~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~-~~ 314 (402)
T TIGR00897 237 -GLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF-GH 314 (402)
T ss_pred -HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc-CC
Confidence 222333455555566665543 3344566888999999999999999888653 22222333222222211111 11
Q ss_pred chhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Q 011275 379 SASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTF 458 (489)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 458 (489)
.. +......+.++.... +..+.. ....|..| +.|+++.|+.+...++++.++|.+.+.+.+..|+...+.+.+++
T Consensus 315 ~~--~~~~~~~~~~G~~~~-~~~~~~-~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~ 389 (402)
T TIGR00897 315 SF--AVALIIAIALGIFLA-GYVPLA-AVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAAL 389 (402)
T ss_pred cH--HHHHHHHHHHHHHHH-HHHHHH-HHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 11 111111122222221 122332 34567655 68999999999999999999999999998888887777777777
Q ss_pred HHHHHHH
Q 011275 459 CLMAVAF 465 (489)
Q Consensus 459 ~~~~~~~ 465 (489)
.+++.+.
T Consensus 390 ~~i~~~~ 396 (402)
T TIGR00897 390 YVVSAFL 396 (402)
T ss_pred HHHHHHH
Confidence 6665443
No 63
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.95 E-value=2.3e-25 Score=219.52 Aligned_cols=326 Identities=17% Similarity=0.257 Sum_probs=211.9
Q ss_pred cceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHH
Q 011275 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGML 145 (489)
Q Consensus 66 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~ 145 (489)
..+...+.+|.+.+++|++.+ +.++..+.+.++..+++++.|+++||+|||+++..+.++.+++..++..+++++.++
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 83 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAG--SVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLI 83 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 345567889999999988644 568899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHH-HH
Q 011275 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC-LA 224 (489)
Q Consensus 146 ~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~ 224 (489)
+.|+++|++.+...+....++.|++|+++|++..++......+|..++++++..+.+..+ ||+.|++..+..++.. +.
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHHH
Confidence 999999999998888888999999999999999999999999999999988877666555 7999887655544433 33
Q ss_pred hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhh
Q 011275 225 MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSG 304 (489)
Q Consensus 225 ~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (489)
.++.||+++ +++.++ .+.++ ...++++.+++++.........+. +.+
T Consensus 163 ~~~~~~~~~----~~~~~~-----------~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 209 (377)
T PRK11102 163 FFFIPETLP----KERRQP-----------FHLRT--------------TIRNFASLFRHKRVLGYMLASGFS----FAG 209 (377)
T ss_pred HHhCCccCc----ccccCC-----------CChHH--------------HHHHHHHHHcChHHHHHHHHHHHH----HHH
Confidence 455676532 000000 00000 001223344444433322221111 111
Q ss_pred HHHHHHhHHHHH-HhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCch
Q 011275 305 INAIFYFSSSVF-KSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 380 (489)
Q Consensus 305 ~~~~~~~~~~~~-~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (489)
.+....+.+..+ +..+.+ .+.......++..++.++.+++.||+|||+.+..+.....+........... ...
T Consensus 210 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~- 286 (377)
T PRK11102 210 MFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL--DLG- 286 (377)
T ss_pred HHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH--hhh-
Confidence 112222222222 333443 3455566778888999999999999999998877765444333222221111 011
Q ss_pred hhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHH
Q 011275 381 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINF 433 (489)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~ 433 (489)
.+........+...... ..+....+..|..| +.|+++.++.+......+.
T Consensus 287 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~ 336 (377)
T PRK11102 287 -FWALVVGVAAFVGCVSM-ISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGA 336 (377)
T ss_pred -HHHHHHHHHHHHHHHHH-hhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHH
Confidence 11111111122111111 12222335667777 8899999998776554333
No 64
>PRK10133 L-fucose transporter; Provisional
Probab=99.95 E-value=4e-25 Score=220.94 Aligned_cols=363 Identities=12% Similarity=0.093 Sum_probs=228.3
Q ss_pred HHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHH
Q 011275 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (489)
Q Consensus 54 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~ 133 (489)
+.+++..++.+.+....+..+|.+.+++|.+. .+.++..+.+.+|+.+++++.|+++||+|||+++..+.++++++++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~--~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 106 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQFQQAFTLTN--FQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAA 106 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 34444446666677778888999999998864 4668999999999999999999999999999999999999999998
Q ss_pred HH---HhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccc--c------
Q 011275 134 IS---ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK--E------ 202 (489)
Q Consensus 134 l~---~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~--~------ 202 (489)
++ +.+++++.++++|+++|+|.|...+....++.|+.|+++|++.+++.+..+.+|..++++++..+. .
T Consensus 107 l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~ 186 (438)
T PRK10133 107 LFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQ 186 (438)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccch
Confidence 85 568999999999999999999999999999999888887877888889988899888887764321 0
Q ss_pred ----------CCc-------hhHHHHHH-HHHHHHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHH
Q 011275 203 ----------IAG-------WWRICFWV-SIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAE 263 (489)
Q Consensus 203 ----------~~~-------~wr~~f~~-~~~~~~~~~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 263 (489)
..+ .||++|+. ..+..++..+. ....||.+. +++.+
T Consensus 187 ~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~~~~~--------------------- 241 (438)
T PRK10133 187 DVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS----DNHSD--------------------- 241 (438)
T ss_pred hhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----ccccc---------------------
Confidence 011 15666653 22222222222 222344210 00000
Q ss_pred HHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHH-HH-hcCCCc---chHHHHHHHHHHHHH
Q 011275 264 LSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSV-FK-SAGLSS---GLANVFVGIANLLGS 338 (489)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~---~~~~~~~~i~~~~g~ 338 (489)
++......+.+++++++.++...+..+++...... ...|.+.. ++ ..+.+. +.......++..+|.
T Consensus 242 -----~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~----~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~ 312 (438)
T PRK10133 242 -----AKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTA----CWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGR 312 (438)
T ss_pred -----ccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHH----HHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00000011234556666655443333332221111 11222222 23 345553 456677888999999
Q ss_pred HHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhh
Q 011275 339 VVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRA 418 (489)
Q Consensus 339 ~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 418 (489)
++++++.||+|+|+++..+.....+.+.+.... +.... +..+.+.+++.+ ...|.......|.+|+ ..+
T Consensus 313 ~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-----~~~~~----~~~~~l~glg~~-~i~P~~~s~a~~~~~~-~~~ 381 (438)
T PRK10133 313 FTGTWLISRFAPHKVLAAYALIAMALCLISAFA-----GGHVG----LIALTLCSAFMS-IQYPTIFSLGIKNLGQ-DTK 381 (438)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc-----CChHH----HHHHHHHHHHHH-HHHHHHHHHHHcccch-hhc
Confidence 999999999999998777655444333322211 11111 111122222222 1234555567777765 466
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHH
Q 011275 419 KAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVA 464 (489)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~ 464 (489)
++.++.. +..+++.++|.+.+.+.+..| ....|.+..++.+...+
T Consensus 382 ~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 382 YGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred cchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 7777765 455677888888887777776 45666544444443333
No 65
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.94 E-value=2.1e-25 Score=218.93 Aligned_cols=332 Identities=18% Similarity=0.173 Sum_probs=203.9
Q ss_pred cceeeccchhh-hhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcc-hHHH
Q 011275 66 HLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR-NLIG 143 (489)
Q Consensus 66 ~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~-~~~~ 143 (489)
......+..|. +.+++|++.+ +.+++.+.+.+++.+++++.|+++||+|||+.+..+.++..++.+++++++ +++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (366)
T TIGR00886 16 VWFAFSPLAVQMIKDDLGLSTA--QLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSV 93 (366)
T ss_pred HHHHhHHhhhHHHHHHhCCCHH--HhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 34446777785 8889988754 568999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhccccc----------CCchhHHHHHH
Q 011275 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE----------IAGWWRICFWV 213 (489)
Q Consensus 144 l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~----------~~~~wr~~f~~ 213 (489)
+++.|+++|++.+. ......+++|++|+++|++..+++.....+|..+++.++..+.. ..+ ||+.|+.
T Consensus 94 ~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~-w~~~~~~ 171 (366)
T TIGR00886 94 LLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLA-WGWAFVI 171 (366)
T ss_pred HHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccc-ccchhHH
Confidence 99999999998654 45567889999999999999999886666665555544433221 123 7988843
Q ss_pred --HHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHH
Q 011275 214 --SIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (489)
Q Consensus 214 --~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (489)
..+..+...+...+.+|+|+. +.++.+...++ .. ...++.......+.+++++.+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 231 (366)
T TIGR00886 172 VPAGILLLPALLIFFVGADTPPG-----KPATGKLSFKG----AR-----------WSVGTGALGDQLKVFRDRHTWILA 231 (366)
T ss_pred HHHHHHHHHHHHHHHhcccCCcc-----cccchhccccc----cc-----------ccccchhHHHHHHHHhccchhhHH
Confidence 233333333444556776531 11110000000 00 000000011334455556555443
Q ss_pred HHHHHHHHHhhhhHHHHHHhHHHHHH-hcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHH
Q 011275 292 IGSTLFALQQLSGINAIFYFSSSVFK-SAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 367 (489)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 367 (489)
....+...... ....+.+.+++ ..+.+ .+.......+..+++.++++++.||+|||+....+......+..+
T Consensus 232 ~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~ 307 (366)
T TIGR00886 232 LLYSVTFGSFL----GVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFL 307 (366)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHH
Confidence 33222221111 12222232332 23433 344455566788899999999999999988776665544444333
Q ss_pred HHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHH
Q 011275 368 QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVI 431 (489)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~ 431 (489)
+..... .. ......+............+.+ ..+...+|+.| +.|+++.|+.+++++++
T Consensus 308 ~~~~~~---~~-~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 308 VVLGLV---SP-LSLAVFIVLFVALFFFSGAGNG-STFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHhcCC---Cc-chHHHHHHHHHHHHHHhccccc-hhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 322111 10 0111112222222233333333 34557788887 69999999998887654
No 66
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.94 E-value=1.4e-24 Score=215.15 Aligned_cols=334 Identities=16% Similarity=0.165 Sum_probs=212.7
Q ss_pred hhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchH
Q 011275 62 LFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNL 141 (489)
Q Consensus 62 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~ 141 (489)
......+...+.+|.+.+++|.+.+ +.++..+.+.+++.+++++.|+++||+|||+++..+.++..++.+++..++++
T Consensus 19 ~~~~~~~~~~p~~~~i~~~~~~s~~--~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 96 (394)
T PRK11652 19 VGQMAQTIYVPAIADMARDLNVREG--AVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSL 96 (394)
T ss_pred HHHHHHHHHhccHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccH
Confidence 3334445667788999999988754 56889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHH
Q 011275 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (489)
Q Consensus 142 ~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~ 221 (489)
+.+++.|++.|++.+...+....+..|.+++++|++..++++.+..+|..++++++..+.+..+ ||+.|++..+..++.
T Consensus 97 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~f~~~~~~~~~~ 175 (394)
T PRK11652 97 TVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-WRACYLFLLLLGAGV 175 (394)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hHHHHHHHHHHHHHH
Confidence 9999999999999888777777888999999999999999999999999888888877666556 799998765544433
Q ss_pred -HHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHH
Q 011275 222 -CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQ 300 (489)
Q Consensus 222 -~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (489)
.+..++.||+++. +++.++ . ...+++.+++++++...........
T Consensus 176 ~~~~~~~~~~~~~~---~~~~~~----~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~- 221 (394)
T PRK11652 176 TFSMARWMPETRPA---DARRTR----V--------------------------LASYRTLLSNRRFNCYLLMLIGTLA- 221 (394)
T ss_pred HHHHHHhCCccCcc---ccchhH----H--------------------------HHHHHHHHcChHHHHHHHHHHHHHH-
Confidence 3344567776421 000000 0 0112233344444433222211111
Q ss_pred hhhhHHHHHHhHHHHHHh-cCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccC
Q 011275 301 QLSGINAIFYFSSSVFKS-AGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYI 376 (489)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (489)
+......+.+..+++ .+.+. +.......++.++++.+.+++.||++++... ......+............
T Consensus 222 ---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~- 295 (394)
T PRK11652 222 ---GIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPGWFG- 295 (394)
T ss_pred ---HHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhc-
Confidence 111111122222322 44443 3444455677777888888888888733322 2222222212111111100
Q ss_pred CCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 377 PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRL 442 (489)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (489)
... .+......+.+..+... ..|....+..|.+| +.++++.++.+....+++.+++.+...+
T Consensus 296 ~~~--~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 296 VMN--VWTLLVPAALFFFGAGM-LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred ccc--HHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 011 11111222222222222 23445556778887 6789999999998888888888766544
No 67
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=5.1e-24 Score=199.64 Aligned_cols=357 Identities=19% Similarity=0.207 Sum_probs=234.4
Q ss_pred ceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHH---H
Q 011275 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLI---G 143 (489)
Q Consensus 67 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~---~ 143 (489)
..+.++..+.+.+|+++|.+ |.+++.+.-.+...+.-++.|++.||||.|++...+.++..+-++..+++.+.+ +
T Consensus 30 W~l~s~l~~~i~~~~~LS~~--q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ 107 (417)
T COG2223 30 WTLFSPLGVFIKSDFGLSEG--QKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQ 107 (417)
T ss_pred HHHHHHHHhhhccccCCCHH--HHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 34455556667789888755 568999999888899999999999999999999999999999999888876555 9
Q ss_pred HHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCc--hhHHHHHHHHHHHHHH
Q 011275 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG--WWRICFWVSIVPAAIL 221 (489)
Q Consensus 144 l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~--~wr~~f~~~~~~~~~~ 221 (489)
+++.+++.|++ |+..++...++++++||+++|.+++++. ..++|..+..+++..+....+ +||..-.+..++.++.
T Consensus 108 ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~ 185 (417)
T COG2223 108 LLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIA 185 (417)
T ss_pred HHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999996 5677788889999999999999999998 666665444444443333344 3888777654444443
Q ss_pred HH-HhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHH
Q 011275 222 CL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQ 300 (489)
Q Consensus 222 ~~-~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (489)
.+ .++...+.|......++ ..+..++...++++.|.+.+... .
T Consensus 186 ~v~~~~~~~d~p~~r~~~~~--------------------------------~~~~~~~~v~~~~~~W~lsllY~----~ 229 (417)
T COG2223 186 AVLAWLGMNDVPEHRASVKP--------------------------------QLPAQLKAVFSNKDTWLLSLLYF----A 229 (417)
T ss_pred HHHHHHHhCCChhhhccccc--------------------------------cchhHHHHHhcCcchHHHHHHHH----H
Confidence 33 33333333321000000 00022344555566665543322 2
Q ss_pred hhhhHHHHHHhHHHHHH-hcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccC
Q 011275 301 QLSGINAIFYFSSSVFK-SAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYI 376 (489)
Q Consensus 301 ~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (489)
++.++..+..+.+.+++ +.+.+ .+...........+..+++|+++||+|.+|+....+..++++..+.....+...
T Consensus 230 tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~ 309 (417)
T COG2223 230 TFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFG 309 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccc
Confidence 33333344444444332 34443 344444444555566778999999999999998888888877766554332211
Q ss_pred CCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHH
Q 011275 377 PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIF 455 (489)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~ 455 (489)
. .......+...+........|.+.+ +-+++.++| +.-+...|++..++.++++..|..+...++..| +...|.++
T Consensus 310 ~-~~~~~~~~~~~l~l~~~~G~GnGsv-fk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~ 386 (417)
T COG2223 310 H-GGSFVVFVAVFLALFVFAGLGNGSV-FKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLL 386 (417)
T ss_pred c-CcchHHHHHHHHHHHHHhccCcchh-eeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHH
Confidence 1 1112222222233333444444444 446788887 478889999999999999999999888888877 45667777
Q ss_pred HHHHHHHHHHH
Q 011275 456 GTFCLMAVAFV 466 (489)
Q Consensus 456 ~~~~~~~~~~~ 466 (489)
..+++++.++.
T Consensus 387 ~~~~~~a~v~~ 397 (417)
T COG2223 387 LAFYLVALVLT 397 (417)
T ss_pred HHHHHHHHHHH
Confidence 77766666544
No 68
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.93 E-value=4.2e-24 Score=240.02 Aligned_cols=330 Identities=13% Similarity=0.008 Sum_probs=211.3
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHH---HHhcchHHHHHHHHHHH
Q 011275 75 ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI---SATTRNLIGMLLGRFVV 151 (489)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l---~~~~~~~~~l~~~R~l~ 151 (489)
+.+..+++.+.+....+++.+++.+++.++++++|+++||+|||++++.+.++..++.++ +..+.+++.++++|+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 113 (1146)
T PRK08633 34 NTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLL 113 (1146)
T ss_pred HHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 444556666555556789999999999999999999999999999999888766555544 34567899999999999
Q ss_pred hhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccC--------CchhHHHHHH-HHHHHHHHH
Q 011275 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI--------AGWWRICFWV-SIVPAAILC 222 (489)
Q Consensus 152 G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~--------~~~wr~~f~~-~~~~~~~~~ 222 (489)
|++.+...+...+++.|++|+++|+++++++..+..+|.++|++++..+.+. .+||++.+.+ .....++.+
T Consensus 114 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1146)
T PRK08633 114 GAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGL 193 (1146)
T ss_pred HHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988776544 2344444433 333333334
Q ss_pred HHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhh
Q 011275 223 LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQL 302 (489)
Q Consensus 223 ~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (489)
+..+.+||+|.....+. ++ ++ ....+ + ....+..+++++.++...+...++.....
T Consensus 194 ~~~~~~~~~~~~~~~~~--~~-~~-------~~~~~----~----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 249 (1146)
T PRK08633 194 IFAYRLPKVPAAAPEVF--DK-KK-------YLFPK----L----------LWRNLKLLRSDRVLWLAIIGLSYFWFISQ 249 (1146)
T ss_pred HHHhcCcCCCCCCcccc--cc-cc-------cccHH----H----------HHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 44556788764211000 00 00 00000 0 00123344555555544443333222211
Q ss_pred hhHHHHHHhHHHHHHhcCCC----cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCC
Q 011275 303 SGINAIFYFSSSVFKSAGLS----SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPG 378 (489)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (489)
......+.| .....+.+ .++.....+++.+++.++.+++.||+++++.+.++.++.+++..++....
T Consensus 250 ~~~~~~~~~---~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~------ 320 (1146)
T PRK08633 250 LAQANFPAY---AKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP------ 320 (1146)
T ss_pred HHHHhhHHH---HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh------
Confidence 111122222 22223333 34566677788899999999999999998877766665555444333221
Q ss_pred chhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 011275 379 SASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFL 440 (489)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~ 440 (489)
..+..+...++++++.+.. .+....+..|..|++.|++++|+.+.+.+++..+++.+..
T Consensus 321 --~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~ 379 (1146)
T PRK08633 321 --SLASVLVLFFLFGFSAGLF-IVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTT 379 (1146)
T ss_pred --hHHHHHHHHHHHHHHHHHh-hHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 1111122222222222222 2334567889999999999999999999888766655433
No 69
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.93 E-value=9.7e-24 Score=206.20 Aligned_cols=328 Identities=16% Similarity=0.166 Sum_probs=214.4
Q ss_pred eeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHH
Q 011275 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLG 147 (489)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~ 147 (489)
....+.+|.+.+|+|.+.+ +.++..+.+.+++.+++++.|+++||+|||+++..+.++..++.+++ .+++++.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~--~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFS--VAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCCCHH--HHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 4567889999999998754 56899999999999999999999999999999999999888888877 78899999999
Q ss_pred HHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCch-hHHHHHHHHHHHHHHHHHhh
Q 011275 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-WRICFWVSIVPAAILCLAMV 226 (489)
Q Consensus 148 R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-wr~~f~~~~~~~~~~~~~~~ 226 (489)
|++.|++.+...+....++.|++| ++|+++.+.++....+|..+++.++..+.+..++ ||+.|....+..++. ...
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~--~~~ 170 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA--LLA 170 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH--HHH
Confidence 999999999888888888899886 5899999999999999988888777666544433 898887644333222 222
Q ss_pred cccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHH
Q 011275 227 FCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGIN 306 (489)
Q Consensus 227 ~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (489)
+.||+++ +.++ + +. ......++.++++..+.......+... ...
T Consensus 171 ~~~~~~~------~~~~-----------~-------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 214 (355)
T TIGR00896 171 WIPQVRR------RVAA-----------N-------------QT--TTRLTPVRIWRSPLAWQVTVFFGLQSG----LYY 214 (355)
T ss_pred Hhhhhcc------ccCC-----------C-------------CC--CCCCCCchhhcCHhHHHHHHHHHHHHH----HHH
Confidence 3344321 0000 0 00 000112234444444333222111111 112
Q ss_pred HHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHhhHHHHHHHHHHHHHhhccCCCchhh
Q 011275 307 AIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLG-RKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 382 (489)
Q Consensus 307 ~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~g-rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (489)
....+.+.++++.+.+. +.......++.+++.++.|++.||++ ||+.+..+....+++......... .. .
T Consensus 215 ~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~ 288 (355)
T TIGR00896 215 SLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM-----HG-L 288 (355)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh-----hH-H
Confidence 22334455555555543 34566677899999999999999994 555555555555554433332211 11 1
Q ss_pred HHHHHHHHHHHHHHhcCcccccccccc-ccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011275 383 YLSVGGMLMFVLTFALGAGPVPSLLLP-EIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 447 (489)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 447 (489)
.. ...++..+.. ...|....... +..+++.+++..++.+.++++++.++|.+.+.+.+..|
T Consensus 289 ~~---~~~l~g~~~g-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 289 WA---WALVLGLGQG-GAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HH---HHHHHHHhhh-hHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11 1112222211 11233223333 44456778999999999999999999999888888765
No 70
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.6e-24 Score=214.77 Aligned_cols=269 Identities=21% Similarity=0.265 Sum_probs=192.5
Q ss_pred ceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHH
Q 011275 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (489)
Q Consensus 67 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~ 146 (489)
.++.++.+..+.+|.+...+ +.+.+.+++++||++|.++++.|.||++-.+.+..+.+++++.++++....|++.+++
T Consensus 62 ~si~~a~l~g~~edl~~~~~--~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ia 139 (495)
T KOG2533|consen 62 SSIVNASLSGLKEDLKLVGN--QLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIA 139 (495)
T ss_pred hcchhHHHcCCccccchhhh--hhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 34556666566688777655 4578999999999999999999999999999999999999999988888999999999
Q ss_pred HHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhccc------ccCCchhHHHHHHHHHHHHH
Q 011275 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV------KEIAGWWRICFWVSIVPAAI 220 (489)
Q Consensus 147 ~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~------~~~~~~wr~~f~~~~~~~~~ 220 (489)
.|++.|+..+..+|....+++-|+.++|||+.++++..+..+|.++|.++...+ ....+ |||.|++.++..++
T Consensus 140 lr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~g-W~~~FiI~G~i~~~ 218 (495)
T KOG2533|consen 140 LRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAG-WRWLFIIEGVITLV 218 (495)
T ss_pred HHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCC-ceeehhHHHHHHHH
Confidence 999999999999999999999999999999999999999999988888876653 22334 89999986555555
Q ss_pred HH-HHhhcccCChH--HHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHH
Q 011275 221 LC-LAMVFCAESPH--WLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLF 297 (489)
Q Consensus 221 ~~-~~~~~~pEsp~--~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (489)
.. +..+++|+.|. |... ++|.+-..++.+ +..+.+..++.+...+.+.++.+..+...+..++.
T Consensus 219 ~gi~~f~~lp~~P~~~~fl~---~~ek~~~~~~~~----------~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~ 285 (495)
T KOG2533|consen 219 LGIVVFFFLPDNPSKAWFLT---DEEKELVVERLR----------ESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFL 285 (495)
T ss_pred HHheEEEEecCChhhccccc---hHHHHHHHHHHH----------hccCCCcccccCHHHHHHHHhchhHHHHHHHHHHH
Confidence 44 45667899986 2211 111110011110 00011111113445567777777766655433332
Q ss_pred HHHhhhhHHHHHHhHHHHHHh-cCC---CcchHHHHHHHHHHHHHHHHHHHHhh----cCCchhHH
Q 011275 298 ALQQLSGINAIFYFSSSVFKS-AGL---SSGLANVFVGIANLLGSVVAMVLMDK----LGRKALLQ 355 (489)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~i~~~~g~~~~g~l~dr----~grr~~~~ 355 (489)
.. ..+...+|.|.+++. .+. +++...++..++.+++.+++|+++|| ..+|....
T Consensus 286 ~l----v~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~ 347 (495)
T KOG2533|consen 286 KL----VNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFI 347 (495)
T ss_pred hh----ccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 22 233455666666665 223 34567888999999999999999999 44554433
No 71
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.93 E-value=1.5e-23 Score=207.81 Aligned_cols=358 Identities=14% Similarity=0.118 Sum_probs=232.6
Q ss_pred HHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHH
Q 011275 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (489)
Q Consensus 54 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~ 133 (489)
+++++..+..|+..++.++.+|.+++++|.+. .+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++..
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~--~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQFQQAFTLTA--FQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 34555666778777888899999999999864 4678999999999999999999999999999999999999999988
Q ss_pred HHHh---cchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccC-------
Q 011275 134 ISAT---TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI------- 203 (489)
Q Consensus 134 l~~~---~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~------- 203 (489)
+... .++++.+++.|++.|+|.|...+....++.+..|+++|++..++.+....+|..+++.++..+...
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~ 163 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQ 163 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchh
Confidence 8543 468999999999999999999999999999999999999999999999999988888776544211
Q ss_pred ------------------CchhHHHHHHHHHHHHHHHHHhhc--ccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHH
Q 011275 204 ------------------AGWWRICFWVSIVPAAILCLAMVF--CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAE 263 (489)
Q Consensus 204 ------------------~~~wr~~f~~~~~~~~~~~~~~~~--~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 263 (489)
...||++|++.++..++..+...+ .||.++ .++ +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-------~~~-~------------------ 217 (410)
T TIGR00885 164 DVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-------SDA-K------------------ 217 (410)
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-------ccc-c------------------
Confidence 012899998755544443333322 333210 000 0
Q ss_pred HHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhc--CCCcch---HHHHHHHHHHHHH
Q 011275 264 LSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA--GLSSGL---ANVFVGIANLLGS 338 (489)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~i~~~~g~ 338 (489)
+ .......++.+++++++......+++....... ..+.+...+.. +.+.+. .......+..+|.
T Consensus 218 -----~--~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~----~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR 286 (410)
T TIGR00885 218 -----Q--ISFSASLSRLARIRHYREGVIAQFFYVGVQIMC----WTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISR 286 (410)
T ss_pred -----c--ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHH----HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 000011234455566555444444433332221 12223322222 222222 2223335677999
Q ss_pred HHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhh
Q 011275 339 VVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRA 418 (489)
Q Consensus 339 ~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 418 (489)
++++++.||+++|+++.+......+...+.... ++....+. +.....+.+ ...|..+....+..+++.+.
T Consensus 287 ~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~-----~~~~~~~~----l~~~glf~s-~~fp~i~sl~~~~~g~~~~~ 356 (410)
T TIGR00885 287 FIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA-----GGHVGLYC----LTLCSAFMS-LMFPTIYGIALKGLGQDTKY 356 (410)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc-----CChHHHHH----HHHHHHHHH-HHHHHHHHHHHhhhhhhhhh
Confidence 999999999999998766655555444333221 11111111 111111111 22356666778888877776
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHh------CCchhHHHHHHHHHHH
Q 011275 419 KAMAVCMSVHWVINFFVGLLFLRLLEQL------GPQLLYSIFGTFCLMA 462 (489)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~~~ 462 (489)
.+.+++.++ +|+.+.|.+.+.+.|.. +....|.+...+.+..
T Consensus 357 ~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 357 GAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred hHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHHH
Confidence 667766655 88999999998888843 3455665544443333
No 72
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=2.2e-23 Score=206.49 Aligned_cols=356 Identities=14% Similarity=0.058 Sum_probs=221.5
Q ss_pred HHhhhhccceeeccchhh-hhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHh
Q 011275 59 SSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (489)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~ 137 (489)
.+++.......+.+.++. +.+++|.+ ..+.|+..+.+.++..+.+++.|+++||+|||+++..+.++..++.+++..
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~g~s--~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~ 95 (400)
T PRK11646 18 DNMLVVLGFFVVFPLISIRFVDQLGWA--AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI 95 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 334444444444555544 46777776 446688999988898899999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHH
Q 011275 138 TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (489)
Q Consensus 138 ~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~ 217 (489)
+++++.+++.|+++|++.+...+....++.|++|+++|+++.++......+|..+|++++..+. ..+ ||+.|++..+.
T Consensus 96 ~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g-~~~~f~~~~~~ 173 (400)
T PRK11646 96 AHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD-FRLVCATGAVL 173 (400)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-HHHHHHHHHHH
Confidence 9999999999999999988888888889999999999999999999999999999998887766 344 79999886555
Q ss_pred HHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHH
Q 011275 218 AAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTL 296 (489)
Q Consensus 218 ~~~~~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (489)
.++..+. .++.||.+. +++.++ ....+++.++++.+.........
T Consensus 174 ~~~~~i~~~~~~~~~~~----~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
T PRK11646 174 FVLAAAFNAWLLPAYKL----STVRTP------------------------------VREGMTRVLRDKRFVTYVLTLTG 219 (400)
T ss_pred HHHHHHHHHHhCCcccc----cccchh------------------------------hHHHHHHHHcCchHHHHHHHHHH
Confidence 4443322 334454210 000000 00112334444444332222221
Q ss_pred HHHHhhhhHHHHHHhHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHh-hcCCchhHHHhhHHHHHHHHHHHHHh
Q 011275 297 FALQQLSGINAIFYFSSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMD-KLGRKALLQWSFFSMAVSMAIQVAAS 372 (489)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~d-r~grr~~~~~~~~~~~~~~~~~~~~~ 372 (489)
+..... ....+.|...++.+.+ .+......+++...+....+++.| |++.++.+..+....+++........
T Consensus 220 ~~~~~~----~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~ 295 (400)
T PRK11646 220 YYMLAV----QVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS 295 (400)
T ss_pred HHHHHH----HHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh
Confidence 111111 1112233333332222 233333444444444444455554 56656555555544444433322211
Q ss_pred hccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC----C
Q 011275 373 SSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG----P 448 (489)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~ 448 (489)
. . . ..+....++..+.. ...|....+..|..|++.|++++|+.+....++..++|.+.+.+.+..+ .
T Consensus 296 -----~-~-~-~~~~~~~l~~~g~~-~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~ 366 (400)
T PRK11646 296 -----N-L-Q-QLFTLICLFYIGSI-IAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQP 366 (400)
T ss_pred -----h-H-H-HHHHHHHHHHHHHH-HHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCc
Confidence 1 1 1 11111122222222 1234455678899999999999999999999999999998888877642 2
Q ss_pred chhHHHHHHHHHHHHHH
Q 011275 449 QLLYSIFGTFCLMAVAF 465 (489)
Q Consensus 449 ~~~~~~~~~~~~~~~~~ 465 (489)
...+...+.++++..+.
T Consensus 367 ~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 367 ELPWMMLGIIGLITLLA 383 (400)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 34554445555554443
No 73
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=6.9e-24 Score=209.82 Aligned_cols=356 Identities=17% Similarity=0.208 Sum_probs=239.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcc--hHHHHHHHHHHHhhhccccccccc
Q 011275 86 NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAA 163 (489)
Q Consensus 86 ~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~--~~~~l~~~R~l~G~g~g~~~~~~~ 163 (489)
++.+.+++.+.+++|+.+++++.|+++||+|-|+++..+.++.++++++...+. +++.+++.|++||++.|..++...
T Consensus 71 s~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~ 150 (466)
T KOG2532|consen 71 SSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIG 150 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhh
Confidence 455679999999999999999999999999999999999999999999987765 445678999999999999999999
Q ss_pred chhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccC-CchhHHHHHHHHHHHHHHHHHh-hcccCChHHHHhcCCH
Q 011275 164 LYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI-AGWWRICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRT 241 (489)
Q Consensus 164 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~-~~~wr~~f~~~~~~~~~~~~~~-~~~pEsp~~l~~~~~~ 241 (489)
.+.+.|+|++||++..++...+..+|.+++.++++.+.+. .| |+.+|++.++.+++..+++ ++..|+|.- +.+.
T Consensus 151 ~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W~sifY~~g~~g~i~~~~w~~~~~d~P~~---h~~i 226 (466)
T KOG2532|consen 151 SILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-WPSIFYVFGIVGLIWFILWFLFYSDSPSK---HPNI 226 (466)
T ss_pred ceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHHhcCCccc---CCCC
Confidence 9999999999999999999999999998888777777666 55 7999999877777766555 445666642 1111
Q ss_pred HHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCC
Q 011275 242 AEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL 321 (489)
Q Consensus 242 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (489)
. +++++++.... ..+..+.....+++++++++..+..+++.+...........+.+.|..++++..-.
T Consensus 227 s--~~El~~I~~~k----------~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~ 294 (466)
T KOG2532|consen 227 S--EKELKYIEKGK----------SEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVR 294 (466)
T ss_pred C--HHHHHHHHhcc----------cccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChh
Confidence 1 11222221110 01111111467899999999988887776655443333333333333333333333
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhcCCc--------hhH-HHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHH
Q 011275 322 SSGLANVFVGIANLLGSVVAMVLMDKLGRK--------ALL-QWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMF 392 (489)
Q Consensus 322 ~~~~~~~~~~i~~~~g~~~~g~l~dr~grr--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (489)
+.|.......+..++..+++|.++||+-+| +.. .+++.+.++.++.+... ..... +..+..+.+
T Consensus 295 ~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~-----~~~~~-~~a~~~l~~- 367 (466)
T KOG2532|consen 295 ETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT-----SDEHR-LLAVILLTI- 367 (466)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec-----CCCcc-hHHHHHHHH-
Confidence 467888888899999999999999998663 111 12233333322222211 11111 111111111
Q ss_pred HHHHhcCccccccccccccC-CchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCchhHHHHHHHHHHHHHHH
Q 011275 393 VLTFALGAGPVPSLLLPEIF-PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE---QLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 393 ~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
..++ .|.. ....+..-.- -+++.+..+|+.+.+..+.+++.|.+.+.+.. .-.|...|.+.+++.++..++.
T Consensus 368 ~~~~-~g~~-~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 368 AIGL-SGFN-ISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIF 443 (466)
T ss_pred HHHH-cccc-hhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchhe
Confidence 1111 1111 1111222222 46899999999999999999999998877662 2346778888888877776443
No 74
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=1.3e-23 Score=207.85 Aligned_cols=369 Identities=13% Similarity=0.092 Sum_probs=235.7
Q ss_pred HHHhhhhccceeeccchhh-hhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHH
Q 011275 58 LSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (489)
Q Consensus 58 l~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~ 136 (489)
.+.++.....+...+.+|. +.+++|++.+ +.|+..+.+.++..+++++.|+++||+|||+++..+.++..++.++.+
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~--~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~ 91 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVD--LIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIP 91 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHH
Confidence 3444444455555666654 4567787644 568999999999999999999999999999999999999999999999
Q ss_pred hcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHH
Q 011275 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (489)
Q Consensus 137 ~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~ 216 (489)
++++++.+++.|++.|.+.+...+....+..|..|+++|++..++......+|..++++++..+.. .+ ||..|++..+
T Consensus 92 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g-~~~~f~~~~~ 169 (395)
T PRK10054 92 LVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS-INLPFWLAAI 169 (395)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-cCcHHHHHHH
Confidence 999999999999999988777777788889999999999999999999999999989888877654 34 7989987655
Q ss_pred HHHHHHH-HhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHH
Q 011275 217 PAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGST 295 (489)
Q Consensus 217 ~~~~~~~-~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (489)
..++..+ ..+++||++. +++ ++.++ ..+.++.+++++++.......
T Consensus 170 ~~~i~~i~~~~~~~~~~~----~~~-~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~ 216 (395)
T PRK10054 170 CSAFPLVFIQIWVQRSEK----AIA-TETGS----------------------------VWSPSVLLQDKALLWFTCSGF 216 (395)
T ss_pred HHHHHHHHHHHHHhcccc----ccc-cchhh----------------------------hhhhhhhccCceehHHHHHHH
Confidence 5444433 3333454421 000 00000 001123445555554443332
Q ss_pred HHHHHhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHh
Q 011275 296 LFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (489)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 372 (489)
+..............|.+.. ...+.+. +.......+...+.....+++.||.++|+.+..+.....++........
T Consensus 217 l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 295 (395)
T PRK10054 217 LASFVSGAFASCISQYVMVV-ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG 295 (395)
T ss_pred HHHHHHHHhhhhHHHHHHHh-cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc
Confidence 22211111111112222221 1122222 2233333344445556778999999999987777655555443332211
Q ss_pred hccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH
Q 011275 373 SSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLY 452 (489)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 452 (489)
+.. +........+..+.. ...|....+..+..|++.|++..+..+ .++++..++|.+.+.+.|..|....|
T Consensus 296 -----~~~--~~~~~~~~~~~~g~~-~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~ 366 (395)
T PRK10054 296 -----NSL--LLWGMSAAVFTVGEI-IYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLF 366 (395)
T ss_pred -----hHH--HHHHHHHHHHHHHHH-HHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHH
Confidence 111 111111222222221 223455567888999999999998754 67789999999999999999888788
Q ss_pred HHHHHHHHHHHHHHHhhcccC
Q 011275 453 SIFGTFCLMAVAFVKRNVVET 473 (489)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~pet 473 (489)
.+++++..++.++....++|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~ 387 (395)
T PRK10054 367 VILALAIVAAWLLMLKGMRAR 387 (395)
T ss_pred HHHHHHHHHHHHHHHhccccC
Confidence 777766666655554444443
No 75
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.93 E-value=5.5e-23 Score=203.53 Aligned_cols=362 Identities=14% Similarity=0.145 Sum_probs=213.3
Q ss_pred HHHhhhhccceeeccchhh-hhhhcCCCCchhHHHHHHHH-HHHHHHHHHHhhhhhhhcchhhHHH-HHhHHHHHHHHHH
Q 011275 58 LSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSM-CLGGAFIGSTLSGWIADGVGRRRAF-QLCALPMIIGASI 134 (489)
Q Consensus 58 l~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~-~~~g~~ig~~~~g~l~Dr~GRr~~~-~~~~~~~~i~~~l 134 (489)
+..++.+...+...+.+|. +.+|+|.+.+ +.|+..+. ...++.++++..++ +||+|||+.+ ..+.++.+++..+
T Consensus 22 ~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~--~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~ 98 (393)
T PRK15011 22 IVAFLTGIAGALQTPTLSIFLTDEVHARPA--MVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTL 98 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHH--HHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHH
Confidence 3356666666666777665 4677887654 55777654 45577778877777 9999999875 4556666677778
Q ss_pred HHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccc--hhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHH
Q 011275 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVR--GTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (489)
Q Consensus 135 ~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~R--g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~ 212 (489)
.+++++++.+++.+.+.|...+...+....++.|+.++++| +.++++.+.+..+|..++++++..+.+..+ ||..|+
T Consensus 99 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g-w~~~f~ 177 (393)
T PRK15011 99 FAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS-FTVMYL 177 (393)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC-hHHHHH
Confidence 88999999877655554444456667777788888777666 355678888899999999999888776666 799998
Q ss_pred HHHHHHHHHH-HHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHH
Q 011275 213 VSIVPAAILC-LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (489)
Q Consensus 213 ~~~~~~~~~~-~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (489)
..++..++.. ...+++||+|+ +++ ++ ++ . . +. .++ ..+......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~----~~~-~~-~~---------~----~---~~-~~~------------~~~~~~~~~ 222 (393)
T PRK15011 178 SAAVAFIVCGVMVWLFLPSMRK----ELP-LA-TG---------T----L---EA-PRR------------NRRDTLLLF 222 (393)
T ss_pred HHHHHHHHHHHHHHhhcCccCC----CCc-cc-cc---------c----c---cc-ccc------------ccccHHHHH
Confidence 8665544443 33445777642 100 00 00 0 0 00 000 001111111
Q ss_pred HHHHHHHHHhhhhHHHHHHhHHHHH-HhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHH
Q 011275 292 IGSTLFALQQLSGINAIFYFSSSVF-KSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 367 (489)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 367 (489)
........ .......+.+.++ +..+.+. +.......+..+++.++.|+++||+|||+.+..+.....+....
T Consensus 223 ~~~~~~~~----~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~ 298 (393)
T PRK15011 223 VICTLMWG----TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAG 298 (393)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 11111111 1111112233332 3344443 33334444666788899999999999998766554333332221
Q ss_pred HHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011275 368 QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 447 (489)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 447 (489)
.... +...... ....+..+.+... .+....+..|.+|+ .|+++.++.+...+++..+++.+.+.+.+..+
T Consensus 299 ~~~~------~~~~~~l--~~~~l~~~~~g~~-~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g 368 (393)
T PRK15011 299 MLMA------HSPAILL--GLQLLNAIYIGIL-GGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN 368 (393)
T ss_pred HHHH------hhHHHHH--HHHHHHHHHHHHH-HHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1111 1111111 1111111111111 11223467899885 59999999999999999999999888888888
Q ss_pred CchhHHHHHHHHHHHHHHHHhhcccC
Q 011275 448 PQLLYSIFGTFCLMAVAFVKRNVVET 473 (489)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~pet 473 (489)
+...+.+.+++++++.+.. ...||+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~-~~~~~~ 393 (393)
T PRK15011 369 YHAVFWFALVMIIATLFCL-LRIKDV 393 (393)
T ss_pred hHHHHHHHHHHHHHHHHHH-HhhcCC
Confidence 8777776666666655444 455654
No 76
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.91 E-value=3.7e-22 Score=198.27 Aligned_cols=363 Identities=17% Similarity=0.120 Sum_probs=224.1
Q ss_pred hhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcc-----hhhH-HHHHhHHHHHHHHHH
Q 011275 61 FLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRR-AFQLCALPMIIGASI 134 (489)
Q Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~-----GRr~-~~~~~~~~~~i~~~l 134 (489)
+..|+..+....++|.+.++.|++.++ .|++...... .+.++++|+++||+ |||+ .+..+.++.+++..+
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~g~~~~~--ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~ 84 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTVEGLDIQT--IGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAA 84 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCCCHHH--HHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHH
Confidence 455666777888899999998988664 4666555554 48899999999999 8875 677888888777777
Q ss_pred HHhc---chHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccC-CchhHHH
Q 011275 135 SATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI-AGWWRIC 210 (489)
Q Consensus 135 ~~~~---~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~-~~~wr~~ 210 (489)
.++. .+++.+.+..++.++..+...+...+++.|+.|+++|+++.++...+..+|.++++.++..+.+. .+ ||..
T Consensus 85 l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g-w~~~ 163 (402)
T PRK11902 85 MAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG-WGNT 163 (402)
T ss_pred HHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC-HHHH
Confidence 7776 45777788888888888888888899999999999999999999999999988887776665553 34 7999
Q ss_pred HHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHH
Q 011275 211 FWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (489)
Q Consensus 211 f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (489)
|++.++..++..+..++.||+++. +++.++.++ + ....++++++++.++..
T Consensus 164 f~i~a~~~l~~~l~~~~~~e~~~~---~~~~~~~~~----------------~----------~~~~~~~l~~~~~~~~~ 214 (402)
T PRK11902 164 YLLMAGLMLAGALTTLWAPEPEVP---ARPPRSLGE----------------A----------VVGPLRDFFSRRGAWAL 214 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccc---ccccchhHH----------------H----------HHHHHHHHHhCcCHHHH
Confidence 988655555544445567776431 111000000 0 01124456666666655
Q ss_pred HHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcchHHH---HHH-HHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHH
Q 011275 291 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANV---FVG-IANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMA 366 (489)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 366 (489)
.....++........ .+..+...+..|.+...... ..+ ++.+++.++++++.||+|+|+.+..+.....+...
T Consensus 215 l~~~~l~~~~~~~~~---~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l 291 (402)
T PRK11902 215 LLLIVLYKLGDAFAG---SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNL 291 (402)
T ss_pred HHHHHHHHhHHHHHH---HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 544333322211111 11122233445555432222 222 45788999999999999999877655544444333
Q ss_pred HHHHHhhccCCCchhhHHHHHHHHH--HHHHHhc-CccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 367 IQVAASSSYIPGSASLYLSVGGMLM--FVLTFAL-GAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL 443 (489)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (489)
........ ++.. +........ +..+... ...+....++.+.+|.+.+ +....+..++...++.+.+.+.
T Consensus 292 ~~~~~~~~--~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~ 363 (402)
T PRK11902 292 GYWVLAVT--PKHL--WTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLV 363 (402)
T ss_pred HHHHHHhc--CCcH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 22211111 1111 111111111 1111111 1123344566777776554 4444444455555555677888
Q ss_pred HHhCCchhHHHHHHHHHHHHHHHHh
Q 011275 444 EQLGPQLLYSIFGTFCLMAVAFVKR 468 (489)
Q Consensus 444 ~~~g~~~~~~~~~~~~~~~~~~~~~ 468 (489)
+..|+...|.+.+.+++++.+..++
T Consensus 364 ~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 364 EAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888888777777665543
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.91 E-value=6.1e-22 Score=197.09 Aligned_cols=370 Identities=14% Similarity=0.122 Sum_probs=223.0
Q ss_pred hhhhccceeeccch-hhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchh-hHHHHHhHHHHHHHHHHHHhc
Q 011275 61 FLFGYHLGVVNEPL-ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCALPMIIGASISATT 138 (489)
Q Consensus 61 ~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GR-r~~~~~~~~~~~i~~~l~~~~ 138 (489)
+.+....++..+.+ +.+.+++|++. .+.|++.+.+.++..++++++|.++||+|| |+++..+.++.+++..+..+.
T Consensus 12 ~~~~~~~~~~~~~l~~~l~~~~g~s~--~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~ 89 (418)
T TIGR00889 12 FLQWFIWGSWLVTLGSYMSKTLHFSG--AEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV 89 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 34333444444444 44556677764 467999999999999999999999999965 888888888888888888899
Q ss_pred chHHHHHHHHHHHhhhcccccccccchh----c----ccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHH
Q 011275 139 RNLIGMLLGRFVVGTGMGLGPTVAALYV----T----EVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (489)
Q Consensus 139 ~~~~~l~~~R~l~G~g~g~~~~~~~~~i----~----e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~ 210 (489)
++++.+++.|++.|++.+...+...... . |......|.+..+. +|..+++++++.+.. ...|+.
T Consensus 90 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------lG~~ig~~l~g~l~~-~~~~~~- 161 (418)
T TIGR00889 90 TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGT------IGFIAAMWAVSLLDI-ELSNIQ- 161 (418)
T ss_pred cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehh------HHHHHHHHHHHHhcc-cchhHH-
Confidence 9999999999999998766655444332 1 33333345555542 455555555544322 222454
Q ss_pred HHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHH
Q 011275 211 FWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (489)
Q Consensus 211 f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (489)
|++.++..++..+..+++||+|+ .+++.++ ..+ + .......+.++++.++..
T Consensus 162 f~~~~~~~~~~~~~~~~~~e~~~---~~~~~~~---~~~-------------~---------~~~~~~~~~~k~~~~~~~ 213 (418)
T TIGR00889 162 LYITAGSSALLGVFALTLPDIPV---AKSTAKM---SIK-------------V---------MLGLDAFILFKNKRMAIF 213 (418)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCC---Ccccccc---CHH-------------H---------HhhhhHHHHhcCCCeeeH
Confidence 44444444444445567788753 0111000 000 0 000112334555555444
Q ss_pred HHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCC-----------cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhH
Q 011275 291 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLS-----------SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 359 (489)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~ 359 (489)
....++..... .....+.+...++.+.+ .+.......+...++.+..+++.||+|||+++..+.+
T Consensus 214 ~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~ 289 (418)
T TIGR00889 214 FFFSMLLGAPL----QITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLV 289 (418)
T ss_pred HHHHHHHHhHH----HHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 44333322111 11111222223332211 2444555667788888999999999999999888777
Q ss_pred HHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHH-HHHHHHHHHHHHH
Q 011275 360 SMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCM-SVHWVINFFVGLL 438 (489)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~~~~~~~~~ 438 (489)
..++......... ......+..+...++.+..+.. ..+....++.|.+|++.|++++|+.+ ....++..++|.+
T Consensus 290 ~~~v~~~l~~~~~----~~~~~~~~l~l~~~l~g~~~~~-~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l 364 (418)
T TIGR00889 290 AWALRFGFFAYGD----PEYFGYALLFLSMIVYGCAFDF-FNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYIL 364 (418)
T ss_pred HHHHHHHHHHHcC----cchhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 6665543332211 1111111111222233333221 23444557899999999999999997 5567888899998
Q ss_pred HHHHHHHh------CCchhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011275 439 FLRLLEQL------GPQLLYSIFGTFCLMAVAFVKRNVVETKGKS 477 (489)
Q Consensus 439 ~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~ 477 (489)
.+.+.+.. |+...|.+.+++.+++.++..+..||++++-
T Consensus 365 ~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 365 SGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred HHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 88888874 3567788888888888787888889887754
No 78
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.91 E-value=7.7e-22 Score=194.59 Aligned_cols=357 Identities=14% Similarity=0.055 Sum_probs=228.3
Q ss_pred HHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHH----HHhHHHHHHHHH
Q 011275 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAF----QLCALPMIIGAS 133 (489)
Q Consensus 58 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~----~~~~~~~~i~~~ 133 (489)
+..+......++..|.+|.+.+|+|.+. .+.|++.+.+.++..++++++|+++||+|||... ..+..++.+ .
T Consensus 11 ~~~~~~~~~~~~~~p~l~~~l~~~g~s~--~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 11 LGFFGYFCAYGIFLPFFPAWLKGIGLGE--EMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 3334444445678888999999988864 4668999999999999999999999999985443 222222222 2
Q ss_pred HHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHH
Q 011275 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (489)
Q Consensus 134 l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~ 213 (489)
.+..+++++.+++.|.++|.+.+...+....+..|+ +++|++..+......++|..+++++++.+.+..+ ||..|++
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g-~~~~f~~ 163 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD-EQNILAI 163 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHH
Confidence 445678999999999999999888888887777664 5788999999999999999999998887777667 7998887
Q ss_pred HHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHH
Q 011275 214 SIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (489)
Q Consensus 214 ~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (489)
......+. +..+..+|+++ +++.++ + ++.....+..+.+++++++.....
T Consensus 164 ~~~~~~~~-~~~~~~~~~~~----~~~~~~-~------------------------~~~~~~~~~~~~l~~~~~~~~l~~ 213 (382)
T TIGR00902 164 LTAGLAFM-LIGFLIKPTIP----PKDAIP-E------------------------DESQGDSAFIALLKNPMNLRFLAA 213 (382)
T ss_pred HHHHHHHH-HHHHHcCCCCC----CCcccc-c------------------------cccccchhHHHHHcChHHHHHHHH
Confidence 54432222 22233344321 000000 0 000011234566666666655443
Q ss_pred HHHHHHHhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHH
Q 011275 294 STLFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVA 370 (489)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~ 370 (489)
..+..... .....+.+...++.|.+. +.......++.+++.++.+++.||+|+|+.+.++.+...+.......
T Consensus 214 ~~l~~~~~----~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~ 289 (382)
T TIGR00902 214 VCLIQGAH----AAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGA 289 (382)
T ss_pred HHHHHHHH----HHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 33322221 112223333445556554 34445566788888889999999999999887777666665544332
Q ss_pred HhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCc
Q 011275 371 ASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSV-HWVINFFVGLLFLRLLEQLGPQ 449 (489)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ 449 (489)
... .+..+...++..+.+... .+....++.+. |++.|++++++.+.. ..++..+++.+.+.+.+..|.
T Consensus 290 ~~~--------~~~~~~~q~l~g~~~~~~-~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~- 358 (382)
T TIGR00902 290 IEA--------FPLIFLLQILHCGTFAVC-HLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA- 358 (382)
T ss_pred Hhh--------HHHHHHHHHHHHHHHHHH-HHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-
Confidence 111 111112223333333332 22234467787 999999999997654 446777788888888888875
Q ss_pred hhHHHHHHHHHHHHHHH
Q 011275 450 LLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 450 ~~~~~~~~~~~~~~~~~ 466 (489)
..|.+.+++.+++.++.
T Consensus 359 ~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 359 GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66777777777665443
No 79
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.91 E-value=8.7e-22 Score=196.85 Aligned_cols=365 Identities=18% Similarity=0.114 Sum_probs=203.6
Q ss_pred eeeccchhhhhh-hcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHH---hcch---
Q 011275 68 GVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA---TTRN--- 140 (489)
Q Consensus 68 ~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~---~~~~--- 140 (489)
+...+.+|...+ ++|++. .+.|++.+.+.+++.++++++|+++||+|||+++.++..+..++..... .++.
T Consensus 27 ~~~~~~~~~~l~~~~g~s~--~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (420)
T PRK09528 27 SSWFSFFPIWLHDINGLSG--TDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQY 104 (420)
T ss_pred HHHHHHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555544 477764 4678999999999999999999999999999999887666555433221 1111
Q ss_pred --HHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHH
Q 011275 141 --LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA 218 (489)
Q Consensus 141 --~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~ 218 (489)
....++++++.|.+.....+....+..+ . +++||+..+.......+|..+++++++.+.+. + |++.|++..+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~-~~~~f~~~~~~~ 180 (420)
T PRK09528 105 NILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-N-PQINFWLGSGSA 180 (420)
T ss_pred HHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-C-chHhHHHHHHHH
Confidence 1112223333343332222222222221 1 34566677777777778877777777666543 4 789998876665
Q ss_pred HHHHHHhhcc-cCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHH
Q 011275 219 AILCLAMVFC-AESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLF 297 (489)
Q Consensus 219 ~~~~~~~~~~-pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (489)
++..+..++. +|.++- +++.++ ++ ++++........+.+++++++...+.....
T Consensus 181 ~~~~~~~~~~~~~~~~~---~~~~~~-~~---------------------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~ 235 (420)
T PRK09528 181 LILLVLLFFAKPDAPST---AKVANA-LG---------------------ANASAVSLKDALALLKLPKFWFLVLYVIGV 235 (420)
T ss_pred HHHHHHHhcccccccch---hhhccc-hh---------------------cccccccHHHHHHHccCCCeEeehHHHHHH
Confidence 5554444433 332210 000000 00 000001111233455556555433322221
Q ss_pred HHHhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhc
Q 011275 298 ALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSS 374 (489)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 374 (489)
...........+.|..+.+...+.+. +.......+...++.++.+++.||+|||+.+..+....++...+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~--- 312 (420)
T PRK09528 236 ACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA--- 312 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc---
Confidence 11111111122233333333223322 344455567788999999999999999998777666555544433221
Q ss_pred cCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCchhHH
Q 011275 375 YIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAV-CMSVHWVINFFVGLLFLRLLEQLGPQLLYS 453 (489)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 453 (489)
.+.. .+ +....+....+... .+....+..|.+|++.|++..+. .+....+++.+++.+.+.+.+..|+...|.
T Consensus 313 --~~~~--~~-~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~ 386 (420)
T PRK09528 313 --TGPL--EV-SILKLLHAFEVPFL-LVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYL 386 (420)
T ss_pred --ccHH--HH-HHHHHHHHHHHHHH-HHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHH
Confidence 1111 11 11111112221111 12233567888999999988766 456677888899998899999889888888
Q ss_pred HHHHHHHHHHHHHHhhccc
Q 011275 454 IFGTFCLMAVAFVKRNVVE 472 (489)
Q Consensus 454 ~~~~~~~~~~~~~~~~~pe 472 (489)
+.+++.++..++....+++
T Consensus 387 ~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 387 ILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 8888777666655555554
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.90 E-value=3.9e-22 Score=223.41 Aligned_cols=342 Identities=12% Similarity=0.024 Sum_probs=211.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHH---hHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccch
Q 011275 89 AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL---CALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALY 165 (489)
Q Consensus 89 ~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~---~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~ 165 (489)
..++..+.+.+++++.+++.|+++||+|||+++.. ..+...+....+...+|++.++++|+++|++.+...++..++
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~ 132 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSI 132 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHh
Confidence 45788889999999999999999999999998633 223333333344455899999999999999999999999999
Q ss_pred hcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHH
Q 011275 166 VTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAE 245 (489)
Q Consensus 166 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~ 245 (489)
+.|++|+++|++++++.+++..+|.++|+++++.+....+ |++.|+...+..++.++..+++||++. .+.+.....
T Consensus 133 l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 208 (1140)
T PRK06814 133 LPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGN-FVILVALLMGIAVLGWLASLFIPKTGN---AAPDLKIDR 208 (1140)
T ss_pred hHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHhhCCCCCC---CCCCCeecc
Confidence 9999999999999999999999999999999988876655 688886555555555555566666531 000000000
Q ss_pred HHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcch
Q 011275 246 AEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGL 325 (489)
Q Consensus 246 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (489)
. . ..+. ...++.+.+++.++...+...+..+.........+.|....++......+.
T Consensus 209 ~----------~---~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~ 265 (1140)
T PRK06814 209 N----------I---IRST----------ITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATL 265 (1140)
T ss_pred c----------h---HHHH----------HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHH
Confidence 0 0 0000 012344455555555544433332221111122222222222212222356
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCC-C-----------chhhHHHHHHHHHHH
Q 011275 326 ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIP-G-----------SASLYLSVGGMLMFV 393 (489)
Q Consensus 326 ~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~~~ 393 (489)
.....+++.++|.++.++++|+.++++.+..+.++.++....+......... . ....+......++++
T Consensus 266 ~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 345 (1140)
T PRK06814 266 FLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLA 345 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHH
Confidence 6677788999999999999998877766555544444433322221000000 0 011111222222222
Q ss_pred HHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHH
Q 011275 394 LTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ-LGPQLLYSIFGTF 458 (489)
Q Consensus 394 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 458 (489)
++.+.. .+...++..+..|++.||+++|+.+.+..++..+++.+.+.+.+. .+....+.+.+++
T Consensus 346 ~~~~~~-~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 346 AAGGLY-IVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHh-HHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 222222 223455788999999999999999999999888888877666543 3333444444433
No 81
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.90 E-value=5.2e-21 Score=188.75 Aligned_cols=350 Identities=13% Similarity=0.088 Sum_probs=216.9
Q ss_pred hccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhh----HHHHHhHHHHHHHHHHHHhcc
Q 011275 64 GYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR----RAFQLCALPMIIGASISATTR 139 (489)
Q Consensus 64 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr----~~~~~~~~~~~i~~~l~~~~~ 139 (489)
....+++.+.+|.+.+|+|.+. .+.|+..+.+.++..++++++|+++||+||| +.+.+...+ ........++
T Consensus 17 ~~~~g~~~p~l~~~l~~~g~s~--~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~~~~~~~~~~ 92 (382)
T PRK11128 17 FFAYGVFLPFWSVWLKGQGYTP--ETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--FAVAFWFGAH 92 (382)
T ss_pred HHHHHHHhhhHHHHHHhcCCCH--HHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--HHHHHHHhcc
Confidence 3445678888899999988764 4668999999999999999999999999984 333222221 1223344568
Q ss_pred hHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHH
Q 011275 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (489)
Q Consensus 140 ~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~ 219 (489)
+++.+++.|++.|++.+...+...+++.|+ +++|++..+.......+|..+|++++..+.+..+ ||..|+..++..+
T Consensus 93 ~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~~~~~~~~ 169 (382)
T PRK11128 93 SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILWILTAGVA 169 (382)
T ss_pred cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHHHHHH
Confidence 899999999999999888888777777776 4568888888888889999999999988877666 7999987654444
Q ss_pred HHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHH
Q 011275 220 ILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFAL 299 (489)
Q Consensus 220 ~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (489)
+..+..++.||.++ +++ ++ + .......++++.++++.++.......+...
T Consensus 170 ~~~~~~~~~~~~~~----~~~-~~--~-----------------------~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~ 219 (382)
T PRK11128 170 SMLLGQLLRPTIMP----QGE-SR--Q-----------------------QESAGWPAWKALLKEPTVWRFLLCVSLLQG 219 (382)
T ss_pred HHHHHHHccCCCCC----ccc-cc--c-----------------------ccccccchHHHHHcChhHHHHHHHHHHHHH
Confidence 33333334444311 000 00 0 000011245667777766655443333322
Q ss_pred HhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccC
Q 011275 300 QQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYI 376 (489)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (489)
.... ...+.+....+.+.+. +.......++.+++.++.+++.||+++|+.+..+....++........
T Consensus 220 ~~~~----~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~----- 290 (382)
T PRK11128 220 SHAA----YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST----- 290 (382)
T ss_pred HhHh----HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh-----
Confidence 2111 1112222334455543 334445556777888899999999999998777766555544332211
Q ss_pred CCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCchhHHHH
Q 011275 377 PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVH-WVINFFVGLLFLRLLEQLGPQLLYSIF 455 (489)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~ 455 (489)
+ ..+..+...++.++.+... .+....+..+. |++.+++.++..+.+. .++..+++.+.+.+.+..|. ..|...
T Consensus 291 -~--~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~ 364 (382)
T PRK11128 291 -T--ALPWLIVIQILHCGTFTVC-HLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVM 364 (382)
T ss_pred -h--hHHHHHHHHHHHHHHHHHH-HHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHH
Confidence 1 1111222233333333322 22333456666 5666788888877554 34557788888888888775 455556
Q ss_pred HHHHHHHHHH
Q 011275 456 GTFCLMAVAF 465 (489)
Q Consensus 456 ~~~~~~~~~~ 465 (489)
+.+.+.+...
T Consensus 365 ~~~~~~~~~~ 374 (382)
T PRK11128 365 ALVALPALFI 374 (382)
T ss_pred HHHHHHHHHH
Confidence 6555554433
No 82
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.89 E-value=1.3e-21 Score=191.28 Aligned_cols=328 Identities=15% Similarity=0.063 Sum_probs=196.8
Q ss_pred ceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcc-----hhhHHH-HHhHHHHHHHHHHHHhc--
Q 011275 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRAF-QLCALPMIIGASISATT-- 138 (489)
Q Consensus 67 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~-----GRr~~~-~~~~~~~~i~~~l~~~~-- 138 (489)
..++++.+|.+.+|+|++.+ +.|+.... .+...+ .+++|+++||+ ||||.+ +.+.++.++...+.++.
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~--~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~ 79 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLK--TIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP 79 (356)
T ss_pred chhHHhHHHHHHHHcCCCHH--HHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 45567788999999998865 44665433 344444 89999999998 899975 56777777776677776
Q ss_pred -chHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCch-------hHHH
Q 011275 139 -RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-------WRIC 210 (489)
Q Consensus 139 -~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~-------wr~~ 210 (489)
.+.+.+....++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+....+. ||..
T Consensus 80 ~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 80 STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYI 159 (356)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHH
Confidence 45556777788888888888888889999999999999999999999999998888887665544441 7999
Q ss_pred HHHHHHHHHHHHHHhh-cccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhH
Q 011275 211 FWVSIVPAAILCLAMV-FCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRV 289 (489)
Q Consensus 211 f~~~~~~~~~~~~~~~-~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (489)
|++.++..++..+..+ ..||+++. +.+.++.++. ....+++.++++..+.
T Consensus 160 f~i~ai~~l~~~~~~~~~~~e~~~~---~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~ 210 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFLAKEPQED---ASVPKPLTQA--------------------------VLKPIREFFQRKNMIQ 210 (356)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcc---cccchhHHHH--------------------------HHHHHHHHHHhcCchH
Confidence 9987666655544444 34664220 0000000000 0012333444444222
Q ss_pred HHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcch---HHHHHH-HHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHH
Q 011275 290 VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGL---ANVFVG-IANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSM 365 (489)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~ 365 (489)
.........+.... ......+.+.+.++.|.+... .....+ +..+++.++++++.||+|||+.+..+.+..++..
T Consensus 211 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~ 289 (356)
T TIGR00901 211 ALLLLLLIVLYKLG-DSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTN 289 (356)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 21111111111111 111222223333335555433 233233 4667899999999999999998777766655544
Q ss_pred HHHHHHhhccC-C--CchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHH
Q 011275 366 AIQVAASSSYI-P--GSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHW 429 (489)
Q Consensus 366 ~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~ 429 (489)
........... . +....+......++..+... ...+....+..|.+|+++|++.+|+.+++.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 290 AGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGG-LGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHhcCcccccccchHHHHHHHHHHHHHHhH-HHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 43332211110 0 00111111111212122211 1234556789999999999999999887654
No 83
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.89 E-value=9.2e-21 Score=187.99 Aligned_cols=365 Identities=17% Similarity=0.145 Sum_probs=214.7
Q ss_pred hhhhccceeeccchhhhhh-hcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHH---
Q 011275 61 FLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA--- 136 (489)
Q Consensus 61 ~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~--- 136 (489)
++.....+.+.+.+|.... ++|.+ ..+.|+..+.+.+++.+++++.|+++||+|||+.+..+.....++.....
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~g~s--~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 89 (396)
T TIGR00882 12 FLYFFIMSAYFPFFPIWLHDVNGLS--KTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYV 89 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344456666665544 56765 44678999999999999999999999999999999887766655433221
Q ss_pred hc-----chHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHH
Q 011275 137 TT-----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (489)
Q Consensus 137 ~~-----~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f 211 (489)
.. ..+..+++.|++.|++.+...+....+..|..+ ++++..+.......+|..+++++++.+.+. + ||.+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-~-~~~~f 165 (396)
T TIGR00882 90 FGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSI-D-PQIVF 165 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhcc-C-chHHH
Confidence 11 123345677899999888888877777766533 334455666666677877788877766543 4 79999
Q ss_pred HHHHHHHHHHHHHhhc-ccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHH
Q 011275 212 WVSIVPAAILCLAMVF-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (489)
Q Consensus 212 ~~~~~~~~~~~~~~~~-~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (489)
++..+..++..+..+. .||+|+. ++.++. . + .+.++.+..+..+.+++++++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~----~-------------~-~~~~~~~~~~~~~~l~~~~~~~~ 220 (396)
T TIGR00882 166 WLGSGFALILMLLLMFAKPKAPSS-------ATVANA----L-------------G-ANASAFSLKLALELFRQRKFWMF 220 (396)
T ss_pred HHHHHHHHHHHHHHHHhCCCCchh-------hhhhcc----c-------------c-cccCCCCHHHHHHHHcCCcHHHH
Confidence 8866555554444333 3443320 000000 0 0 00011112245667777766544
Q ss_pred HHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHH
Q 011275 291 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 367 (489)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~ 367 (489)
....................|....++..+.+ .+.......+...++.+..+++.||+|||+.+.++....++....
T Consensus 221 ~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~ 300 (396)
T TIGR00882 221 VLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIG 300 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Confidence 33222211111111111222333322222222 233444455677788889999999999999887776655554433
Q ss_pred HHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Q 011275 368 QVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAV-CMSVHWVINFFVGLLFLRLLEQL 446 (489)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 446 (489)
.... .+.. .+ ....++........ ......+..|..|++.++++.+. .+....+++.+++.+.+.+.+..
T Consensus 301 ~~~~-----~~~~--~~-~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~ 371 (396)
T TIGR00882 301 SSFA-----TTAL--EV-VILKMLHAFEVPFL-LVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI 371 (396)
T ss_pred HHhc-----CChH--HH-HHHHHHHHHHHHHH-HHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence 2211 1111 11 11122222222111 11223356778888999887776 46678889999999999999988
Q ss_pred CCchhHHHHHHHHHHHHHH
Q 011275 447 GPQLLYSIFGTFCLMAVAF 465 (489)
Q Consensus 447 g~~~~~~~~~~~~~~~~~~ 465 (489)
|+...|.+.+++.++....
T Consensus 372 G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 372 GFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred ccHHHHHHHHHHHHHHHHH
Confidence 9888888888776665543
No 84
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.89 E-value=2.6e-20 Score=186.90 Aligned_cols=360 Identities=19% Similarity=0.186 Sum_probs=209.5
Q ss_pred ceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHH
Q 011275 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (489)
Q Consensus 67 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~ 146 (489)
....+..++.+..|+|-+++ ..|+.+...++.+++.++.|.|+|.||||.+++.+.++..+|++.++.++|...+++
T Consensus 60 ~~~~a~~l~~I~~diG~~~~---~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~ia 136 (599)
T PF06609_consen 60 LVLPASILPYINADIGGSDN---WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIA 136 (599)
T ss_pred HhccHHHHHHHHHhcCCCcc---chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHH
Confidence 33445667889999885533 468889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHh-
Q 011275 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM- 225 (489)
Q Consensus 147 ~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~- 225 (489)
+-.+.|+|.|.... ....++|..|.+.|+....+...........++.++..+....+ |||.|++..+...+.++..
T Consensus 137 g~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~-WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 137 GMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSG-WRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCC-cchHHHHHHHHHHHHHHHHH
Confidence 99999999877764 45568999999999877766655544444445555544443444 8999998766555443333
Q ss_pred -hcccCChHHHHhcCC---HHHHHHHHHHHhC-----------------CC---chh--HHHHH----------HHhhcc
Q 011275 226 -VFCAESPHWLYKKGR---TAEAEAEFEKLLG-----------------GS---HVK--SSLAE----------LSKLDR 269 (489)
Q Consensus 226 -~~~pEsp~~l~~~~~---~~~~~~~l~~~~~-----------------~~---~~~--~~~~~----------~~~~~~ 269 (489)
++.|.+ +-..+++ ..+.-++++.+.. .. ..+ +.+.. ..-.+.
T Consensus 215 ~fY~PP~--~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~ 292 (599)
T PF06609_consen 215 FFYFPPP--RAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEW 292 (599)
T ss_pred HHhCCCc--hhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhh
Confidence 334433 2221221 1222223332200 00 000 00000 000010
Q ss_pred C-CCCcchhHHHhhhc-cchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCC------CcchHHHHHHHHHHHHHHHH
Q 011275 270 G-DDGDIVKFEELLYG-RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL------SSGLANVFVGIANLLGSVVA 341 (489)
Q Consensus 270 ~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~~g~~~~ 341 (489)
. ...++.--.+++++ |.+...++..++.. +..+....+|.+......+. ..++...+.+.+...|.++.
T Consensus 293 ~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G---~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~ 369 (599)
T PF06609_consen 293 FGAPKDPLFPHRLFKDRRGFAALLVISFISG---MNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVIL 369 (599)
T ss_pred hccCCCCcCCHHHhccchHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHH
Confidence 0 00111112345554 22222222222221 11122223444443332222 23566777888888999999
Q ss_pred HHHHhhcCCch-hHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhH
Q 011275 342 MVLMDKLGRKA-LLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKA 420 (489)
Q Consensus 342 g~l~dr~grr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 420 (489)
+.+..+++|-| .++++...+.+++.++.... . .+... ......+..+.+++. .. .......-..|.+.-+++
T Consensus 370 g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~--~-~n~~~-~i~~~~l~g~giG~~--~~-~~~~~~ql~~p~~~ig~a 442 (599)
T PF06609_consen 370 GLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR--P-DNKNA-AIAFLVLAGFGIGGI--LV-PAIVIAQLIVPDEDIGTA 442 (599)
T ss_pred HHHHHHccchhHHHHHHHHHHHHHHHHHHHcc--C-CCcch-HHHHHHHHHHhHHHH--HH-HHHHeeEeeeCchHHHHH
Confidence 99998888755 44455555544444333221 1 11111 111111111122211 11 223344556799999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 011275 421 MAVCMSVHWVINFFVGLLFLRLL 443 (489)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~ 443 (489)
.|+..++..+|+.++..++...+
T Consensus 443 ~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 443 TGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999999999988887765544
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.88 E-value=5.4e-20 Score=185.75 Aligned_cols=160 Identities=14% Similarity=0.157 Sum_probs=131.8
Q ss_pred HHHHhhhhccceeeccchhhhhhh---cCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhc-chhhHHHHHhHHHHHHHH
Q 011275 57 TLSSFLFGYHLGVVNEPLESISLD---LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGA 132 (489)
Q Consensus 57 ~l~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr-~GRr~~~~~~~~~~~i~~ 132 (489)
....+...+....+.+.+|.+..+ +|++ +.+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s--~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~ 93 (475)
T TIGR00924 16 FFVELWERFSYYGMQGILAVYLVQQAGLGFS--QEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGH 93 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC--HHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 334444444444455566666543 6665 4467899999999999999999999999 899999999999999999
Q ss_pred HHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCccc---chhhhhHHHHHHHHHHHHHHHhhcccccCCchhHH
Q 011275 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV---RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (489)
Q Consensus 133 ~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~---Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~ 209 (489)
++.+++++++.+.++|++.|+|.|...+....+++|++|+++ |+++.++++.+.++|..+|++++..+.+..+ ||+
T Consensus 94 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g-~~~ 172 (475)
T TIGR00924 94 FMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG-YHV 172 (475)
T ss_pred HHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC-hHH
Confidence 999999999999999999999999999999999999998765 8889999999999999999999888776666 799
Q ss_pred HHHHHHHHHH
Q 011275 210 CFWVSIVPAA 219 (489)
Q Consensus 210 ~f~~~~~~~~ 219 (489)
.|++.++..+
T Consensus 173 ~f~~~~~~~~ 182 (475)
T TIGR00924 173 GFNLAAVGMV 182 (475)
T ss_pred HHHHHHHHHH
Confidence 9987654333
No 86
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.88 E-value=4.4e-22 Score=206.44 Aligned_cols=294 Identities=16% Similarity=0.177 Sum_probs=191.0
Q ss_pred HHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHH
Q 011275 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (489)
Q Consensus 57 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~ 136 (489)
++..+......+.++..++++.++++++.. +.|++.+.+.+|++++.++.++++||+|||+.+.++.+++++++++.+
T Consensus 39 ~~~~~~~~~~~g~~~~~l~~iek~F~lss~--~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~a 116 (633)
T TIGR00805 39 TCAQLQGLLYNGLVNSSLTTIERRFKLSTS--SSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLS 116 (633)
T ss_pred HHHHHHHHHHHHHHHhhchhhhhhhCCCCC--cceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHh
Confidence 334444555567888899999999998755 458999999999999999999999999999999999999999999987
Q ss_pred hcc---------------------------------------------------hHHHHHHHHHHHhhhcccccccccch
Q 011275 137 TTR---------------------------------------------------NLIGMLLGRFVVGTGMGLGPTVAALY 165 (489)
Q Consensus 137 ~~~---------------------------------------------------~~~~l~~~R~l~G~g~g~~~~~~~~~ 165 (489)
+.+ .+..++++|+++|+|.+..++....+
T Consensus 117 lphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~ 196 (633)
T TIGR00805 117 LPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISY 196 (633)
T ss_pred ChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchh
Confidence 652 24567789999999999999999999
Q ss_pred hcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCC------------------ch---hHHHHHHHHHHHHHHHHH
Q 011275 166 VTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA------------------GW---WRICFWVSIVPAAILCLA 224 (489)
Q Consensus 166 i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~------------------~~---wr~~f~~~~~~~~~~~~~ 224 (489)
+.|++|+++|+++.+++..+..+|+.+|++++..+.+.. .| ||..|++.++..++..+.
T Consensus 197 i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~ 276 (633)
T TIGR00805 197 IDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP 276 (633)
T ss_pred hhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988876554321 12 677777766666655555
Q ss_pred hhcccCCh-HHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhh
Q 011275 225 MVFCAESP-HWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLS 303 (489)
Q Consensus 225 ~~~~pEsp-~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (489)
++++||+. +.. .+.+.++.++...+ .+...... + ............+++++++.+....+...+....
T Consensus 277 l~~~p~~lp~~~-~~~~~~~~~~~~~~-~~~~~~~~---~---~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~--- 345 (633)
T TIGR00805 277 FFFFPKALPKEG-KRVNVDVHETEKLE-KSEDKSRK---K---NSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLA--- 345 (633)
T ss_pred HHhCccccCCcc-cccchhhhhhhccc-ccccccch---h---hhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH---
Confidence 56666642 100 00000000000000 00000000 0 0000000112355677777666555444333222
Q ss_pred hHHHHHHhHHHHHH-hcCCCcchH---HHHHHH-HHHHHHHHHHHHHhhcCCc--hhHHHhhHHHHHH
Q 011275 304 GINAIFYFSSSVFK-SAGLSSGLA---NVFVGI-ANLLGSVVAMVLMDKLGRK--ALLQWSFFSMAVS 364 (489)
Q Consensus 304 ~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~i-~~~~g~~~~g~l~dr~grr--~~~~~~~~~~~~~ 364 (489)
......+.|.+++ +.+.+.... .....+ +.++|.+++|+++||++++ +.+..+.....++
T Consensus 346 -~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 346 -FNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred -HHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 2233334444443 355554433 333333 5578999999999999854 4555554444444
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.88 E-value=9.2e-21 Score=191.36 Aligned_cols=139 Identities=15% Similarity=0.201 Sum_probs=117.5
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhc-chhhHHHHHhHHHHHHHHHHHHhcchHHH-HHHHHHHHh
Q 011275 75 ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTRNLIG-MLLGRFVVG 152 (489)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr-~GRr~~~~~~~~~~~i~~~l~~~~~~~~~-l~~~R~l~G 152 (489)
..+.+++|++.+ +.+++.+.+.....+..+++|+++|| +|||+++..+.+++++++++++++.+... +.++|.++|
T Consensus 39 ~yl~~~lg~~~~--~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ 116 (489)
T PRK10207 39 VFFVKQLGFSQE--QAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIA 116 (489)
T ss_pred HHHHHHcCCCHH--HHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 345667887654 44677888877777778899999999 99999999999999999999999877555 447999999
Q ss_pred hhcccccccccchhcccCCccc--chhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHH
Q 011275 153 TGMGLGPTVAALYVTEVSPPFV--RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (489)
Q Consensus 153 ~g~g~~~~~~~~~i~e~~p~~~--Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~ 216 (489)
+|.|...+....+++|.+|+++ |++..++++++.++|..+++.++..+.+..| ||+.|++..+
T Consensus 117 ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g-w~~~F~i~~i 181 (489)
T PRK10207 117 VGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG-YSVTYNLCGA 181 (489)
T ss_pred hccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC-hHHHHHHHHH
Confidence 9999999999999999999874 5778999999999999999999888887777 6999987543
No 88
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.87 E-value=1.4e-20 Score=189.39 Aligned_cols=333 Identities=17% Similarity=0.143 Sum_probs=202.2
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhc----chh-hHHHHHhHHHHHHHHHHHHhcch------HHH
Q 011275 75 ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGR-RRAFQLCALPMIIGASISATTRN------LIG 143 (489)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr----~GR-r~~~~~~~~~~~i~~~l~~~~~~------~~~ 143 (489)
+.+.+++|++. .+.|++.+...+..++..++.|+++|| +|| ||.++.+...++++.+++...++ ...
T Consensus 24 ~~~~~~~g~s~--~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 101 (437)
T TIGR00792 24 FFYTDVLGLSA--AFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVY 101 (437)
T ss_pred HHHHHccCCCH--HHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHH
Confidence 34455677764 456899999999999999999999997 788 45677788888888887776654 455
Q ss_pred HHHHHHHHhhhcccccccccchhcccC-CcccchhhhhHHHHHHHHHHHHHHHhhcccc-------cCCchhHHHHHHHH
Q 011275 144 MLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVK-------EIAGWWRICFWVSI 215 (489)
Q Consensus 144 l~~~R~l~G~g~g~~~~~~~~~i~e~~-p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~-------~~~~~wr~~f~~~~ 215 (489)
+++.+++.+++.+.......++..|.. ++++|++..++.+.+..+|..++..+..++. +..+ ||+.+++.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g-~~~~~~i~~ 180 (437)
T TIGR00792 102 AYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG-WFMFALVLA 180 (437)
T ss_pred HHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-HHHHHHHHH
Confidence 677889999888877766677888887 5789999999888877777554443322221 1223 799888765
Q ss_pred HHHHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHH
Q 011275 216 VPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGS 294 (489)
Q Consensus 216 ~~~~~~~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (489)
+..++..+. .+..+|.+. ++.++. +++.+....+++++++++++......
T Consensus 181 ~l~~~~~~~~~~~~~e~~~-----~~~~~~------------------------~~~~~~~~~~~~l~~~~~~~~~~~~~ 231 (437)
T TIGR00792 181 LIGVVSLIICFFGTKERYS-----EIPKNI------------------------EKKLSLKQIFKALFKNDQLLILCLAY 231 (437)
T ss_pred HHHHHHHHHHHcCCEecCC-----CCCccc------------------------ccCCCHHHHHHHHhCCHHHHHHHHHH
Confidence 555544433 345666531 000000 00000111244556666666554433
Q ss_pred HHHHHHhhhhHHHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhc
Q 011275 295 TLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSS 374 (489)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~ 374 (489)
++.............+|..+.++ .....+.......++.+++.++.+++.||+|+|+.+..+.....++........
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-- 308 (437)
T TIGR00792 232 LFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG-- 308 (437)
T ss_pred HHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc--
Confidence 33222211111112222222211 111123344455788889999999999999999988777666555544333211
Q ss_pred cCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCC-------chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011275 375 YIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFP-------SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 447 (489)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 447 (489)
.. .+......++..++... ..+..+.+.+|..| ++.+|+..|+.+.+..++..+++.+.+.+++..|
T Consensus 309 ---~~--~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 309 ---SN--LPLILVLIILAGFGQNF-VTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred ---hh--HHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11 11111111222222211 13445566777754 5668999999999999999999999888887665
Q ss_pred C
Q 011275 448 P 448 (489)
Q Consensus 448 ~ 448 (489)
+
T Consensus 383 ~ 383 (437)
T TIGR00792 383 Y 383 (437)
T ss_pred C
Confidence 4
No 89
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.87 E-value=8.3e-21 Score=183.04 Aligned_cols=182 Identities=16% Similarity=0.137 Sum_probs=148.2
Q ss_pred HHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHH
Q 011275 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (489)
Q Consensus 53 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~ 132 (489)
.+++|+..|+.-+=.+ ...+.|.+.+|+|++.++. .|.+.+.++.+|++++++.|+++||+|.|+++..+.+.+++.+
T Consensus 29 ~~~lC~fGF~~e~R~n-~s~a~p~L~~elglT~~qv-~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t 106 (511)
T TIGR00806 29 VLYLCFYGFMAQFRPG-ESFITPYLLTVLNFTEETV-TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVW 106 (511)
T ss_pred HHHHHHHHHHHHhhch-HHHHHHHHHHHcCCCHHHh-cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 4456666666543322 3446778888999986642 6899999999999999999999999999999999999999999
Q ss_pred HHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHH
Q 011275 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (489)
Q Consensus 133 ~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~ 212 (489)
++.++++++..+.+.|++.|++.|+.. ....++..++|+++|+++.++...+..+|.+++++++..+. ..+ ||+.+.
T Consensus 107 ~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~g-Wr~y~~ 183 (511)
T TIGR00806 107 LLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLG-WISYST 183 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcC-chhHHH
Confidence 999999999999999999999999999 89999999999999999999999999999888888877643 345 676654
Q ss_pred H---HHHHHHHHHHHhhcccCChHHHHhcC
Q 011275 213 V---SIVPAAILCLAMVFCAESPHWLYKKG 239 (489)
Q Consensus 213 ~---~~~~~~~~~~~~~~~pEsp~~l~~~~ 239 (489)
+ ......+.+++.+++|..++-++.++
T Consensus 184 Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~ 213 (511)
T TIGR00806 184 LNIISLVFMTFSVFLALFLKRPKRSLFFNR 213 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCchhhhhcc
Confidence 4 33444445566678886666555443
No 90
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=1.4e-19 Score=182.36 Aligned_cols=371 Identities=18% Similarity=0.195 Sum_probs=233.2
Q ss_pred eeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHh-----cchHH
Q 011275 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-----TRNLI 142 (489)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~-----~~~~~ 142 (489)
.+...+++-+..++ +.+....+++.....+-..+.+++.|.++||+.||++++.+.++..+..++.++ ..+.+
T Consensus 27 ~~~~va~~wlv~~l--t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~ 104 (524)
T PF05977_consen 27 WMQTVALAWLVTQL--TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPW 104 (524)
T ss_pred HHHHHHHHHHHHHH--hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHH
Confidence 33444555555553 456667788889999999999999999999999999999998877665444332 24778
Q ss_pred HHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHH
Q 011275 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (489)
Q Consensus 143 ~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~ 222 (489)
.+++.-++.|++.+...|...+++.|+.|+++...++++.++..++..++||.+|+.+....| -.+.|++.++..++..
T Consensus 105 ~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G-~~~~f~inalsfl~~i 183 (524)
T PF05977_consen 105 LLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFG-AAAAFLINALSFLISI 183 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999998889888877655445 3667777654443333
Q ss_pred HHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhh
Q 011275 223 LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQL 302 (489)
Q Consensus 223 ~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (489)
+.....++.+ +.+..+.++.. .+++ ..++-...++..+..+....++.+...
T Consensus 184 ~~l~~~~~~~-----~~~~~~~e~~~-------------~~l~----------~G~ryv~~~~~l~~~l~~~~~~~l~~~ 235 (524)
T PF05977_consen 184 LALLRWKPPP-----PPSSLPRERFF-------------SALR----------EGLRYVRSSPPLRSVLLRSFLFNLFAS 235 (524)
T ss_pred HHHHHccccc-----cccccchhhhh-------------hhHH----------HHHHHHhcchHHHHHHHHHHHHHHhhh
Confidence 3222222111 00000000000 0000 012222223344433333333222211
Q ss_pred hhHHHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhh
Q 011275 303 SGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 382 (489)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (489)
.....++++..+.++.....-|+.....++|.++|+++.+++.+|+++++++..+.+..+++...+..... .
T Consensus 236 a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~--------~ 307 (524)
T PF05977_consen 236 AVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPS--------F 307 (524)
T ss_pred HHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchH--------H
Confidence 11122223322222222222356777888999999999999999999988877776666555444332211 1
Q ss_pred HHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Q 011275 383 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMA 462 (489)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (489)
+.....+++.+.+.... .....+...+..|.+.||+..++...+...+..++..+.+.+.+..|...++.+.++..++.
T Consensus 308 ~~~~~~l~l~G~~~~~~-~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~ 386 (524)
T PF05977_consen 308 WLALIALFLAGAAWIIA-NSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLS 386 (524)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 22222222222222221 12233467788999999999999999988888888888888888888887777666655444
Q ss_pred HHHH-HhhcccCCCCCH
Q 011275 463 VAFV-KRNVVETKGKSL 478 (489)
Q Consensus 463 ~~~~-~~~~pet~~~~~ 478 (489)
.++. ...+|+.+..+.
T Consensus 387 ~~~~~~~~l~~~~~~d~ 403 (524)
T PF05977_consen 387 ALIALRFPLRQGEELDL 403 (524)
T ss_pred HHHHHHhcCcccccCCC
Confidence 4333 344666655443
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.85 E-value=5.3e-20 Score=169.22 Aligned_cols=143 Identities=24% Similarity=0.267 Sum_probs=118.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchh
Q 011275 87 TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYV 166 (489)
Q Consensus 87 ~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i 166 (489)
..-.|.+.|+|.+++++.++.+|.++||+|||++++.+++..++...+.+.+.||..++++|++.|+..|-.. +..+++
T Consensus 67 ~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~-v~rAii 145 (451)
T KOG2615|consen 67 VFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLS-VIRAII 145 (451)
T ss_pred chhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchH-HHHHHH
Confidence 4456899999999999999999999999999999999999999999999999999767777999999987554 677899
Q ss_pred cccCCcccchhhhhHHHHHHHHHHHHHHHhhccccc---CCchhHHHHH----HHHHHHHH-HHHHhhcccCCh
Q 011275 167 TEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE---IAGWWRICFW----VSIVPAAI-LCLAMVFCAESP 232 (489)
Q Consensus 167 ~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~---~~~~wr~~f~----~~~~~~~~-~~~~~~~~pEsp 232 (489)
+|..++++|++.++.++.+..+|.++||.+|+.+.+ ..+ +.+|. +..+.... ..+..+++|||-
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g--~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG--SYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc--cCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999999999999999999999999999998776 222 12222 22222222 445567899994
No 92
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.85 E-value=8.4e-19 Score=173.60 Aligned_cols=368 Identities=11% Similarity=0.016 Sum_probs=214.7
Q ss_pred HHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHH--HHHHHHHHHHHHHhh-hhhhhcchhhHHHHHhHHHH-HHH
Q 011275 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLV--VSMCLGGAFIGSTLS-GWIADGVGRRRAFQLCALPM-IIG 131 (489)
Q Consensus 56 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~s~~~~g~~ig~~~~-g~l~Dr~GRr~~~~~~~~~~-~i~ 131 (489)
+....+..|...++..+.+|.+.+|.|.+.+ +.|+. .+.......+.++++ ++..||+||||.+++...+. .+.
T Consensus 6 ~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~--~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~ 83 (390)
T TIGR02718 6 LGLLYLSQGIPIGLAMDALPTLLREDGAPLT--ALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSAC 83 (390)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHH--HHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHH
Confidence 3334466777778889999999999987755 44665 344455555666666 55789999999976655332 211
Q ss_pred HHHHH-h--cch-HHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchh
Q 011275 132 ASISA-T--TRN-LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (489)
Q Consensus 132 ~~l~~-~--~~~-~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~w 207 (489)
....+ + ..+ ...++..-++.++..+...+....+..|..++++++...+....+..+|..++......+.+..+ |
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~g-w 162 (390)
T TIGR02718 84 LASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFG-Q 162 (390)
T ss_pred HHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-H
Confidence 22222 1 222 33444555556666666667777788899999989999988888888898888776666655556 7
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccch
Q 011275 208 RICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (489)
Q Consensus 208 r~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (489)
|..|++.+...++..+..++.+|++. ++.++.+ .+..+.++.++++..
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~~~-----~~~~~~~---------------------------~~~~~~~~~l~~~~~ 210 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDRAV-----ASPEAPL---------------------------ARRASLFRFFRRPLA 210 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCc-----Cccccch---------------------------hhHHHHHHHHcCcCH
Confidence 99998876555544444444443321 0000000 000123455665665
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcchHH---HHHH-HHHHHHHHHHHHHHhhcCCchhHHHhhHHHHH
Q 011275 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLAN---VFVG-IANLLGSVVAMVLMDKLGRKALLQWSFFSMAV 363 (489)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 363 (489)
+......+++...... ...+.+..+++.|.+..... ...+ ...+++.+++|++.||+|+|+.+..+....++
T Consensus 211 ~~~~~~~~l~~~~~~~----~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 211 WSLLALALLSAMTAVS----GFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGS 286 (390)
T ss_pred HHHHHHHHHHHHHHHH----HHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5444433333221111 11122333444566644322 2233 35567788999999999999988766554433
Q ss_pred HHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCc-hhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 364 SMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPS-RIRAKAMAVCMSVHWVINFFVGLLFLRL 442 (489)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (489)
................. ........+..+..+... +.......+..++ +.+++.+++.+++.+++..++|.+.+.+
T Consensus 287 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l 363 (390)
T TIGR02718 287 LALLWFAQAAFWLAPGI--AVAWSCSAFGSLITGITS-VAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYL 363 (390)
T ss_pred HHHHHHHHHHcccCCcH--HHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222211111101111 111111111111111111 1222333444554 8999999999999999999999999999
Q ss_pred HHHhCCchhHHHHHHHHHHHHHH
Q 011275 443 LEQLGPQLLYSIFGTFCLMAVAF 465 (489)
Q Consensus 443 ~~~~g~~~~~~~~~~~~~~~~~~ 465 (489)
.+..|+...|.+.+.+.+++.+.
T Consensus 364 ~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 364 TDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHccHHHHHHHHHHHHHHHHH
Confidence 99888877887777666665443
No 93
>PTZ00207 hypothetical protein; Provisional
Probab=99.84 E-value=2.4e-18 Score=174.05 Aligned_cols=170 Identities=18% Similarity=0.073 Sum_probs=124.7
Q ss_pred ccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc------chHHHH
Q 011275 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT------RNLIGM 144 (489)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~------~~~~~l 144 (489)
+...|.+.+++|++.++ .+++.+.. ..+.+++++.|+++||+|||+++.++.+++.++.++++++ .+++.+
T Consensus 47 sv~s~~L~~~lgls~~~--l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l 123 (591)
T PTZ00207 47 NLISGAMQARYNLTQRD--LSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRL 123 (591)
T ss_pred HHHHHHHHHHhCcCHHH--HHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHH
Confidence 34567788999987554 45555542 3445677889999999999999999999999999999987 689999
Q ss_pred HHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHH-HHHHhhcccccCCchhHHHHHHHHHHHHHH-H
Q 011275 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLM-GSLLIGIPVKEIAGWWRICFWVSIVPAAIL-C 222 (489)
Q Consensus 145 ~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~ 222 (489)
.+.|++.|+|.+...+.....+.+++| ++||++.++...+..+|.. ++++....+. .+ |+..|++.++..++. +
T Consensus 124 ~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~-~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 124 SVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DN-TSAYFFFLMSFALVVGI 199 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh-HHHHHHHHHHHHHHHHH
Confidence 999999999999888888888999997 7899999999999999975 4555544433 23 566665543333333 3
Q ss_pred HHhh--cccCChHHHHhcCCHHHHHHH
Q 011275 223 LAMV--FCAESPHWLYKKGRTAEAEAE 247 (489)
Q Consensus 223 ~~~~--~~pEsp~~l~~~~~~~~~~~~ 247 (489)
+... ..||.|+|...+++.++.++.
T Consensus 200 l~~~~vr~p~~~~~~~~~~~~~~~~~~ 226 (591)
T PTZ00207 200 LAIVFMRLPPFHLTGYQEKHLDEEEKA 226 (591)
T ss_pred HHHhheeCCcchhhcccccCCCHHHHH
Confidence 3333 356666665555544454444
No 94
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.84 E-value=2e-20 Score=173.11 Aligned_cols=345 Identities=16% Similarity=0.116 Sum_probs=228.2
Q ss_pred hhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcc
Q 011275 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG 156 (489)
Q Consensus 77 i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g 156 (489)
-.++...+.++.+.|++.+.+.+.+.+.+++.|++.||+|+|-.+++++..+...+++.++..+++.++++|.+||+|.+
T Consensus 95 ~~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 95 PAEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSA 174 (464)
T ss_pred chhccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHH
Confidence 34455556667788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccchhcccCCccc-chhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcccCChHHH
Q 011275 157 LGPTVAALYVTEVSPPFV-RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWL 235 (489)
Q Consensus 157 ~~~~~~~~~i~e~~p~~~-Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp~~l 235 (489)
.......++++|.+|++. ||+++++.-.+.++|.++||++|+.+.+..| .+.+|.+.++..++-..+.+++-|..
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p~--- 250 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEPT--- 250 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCcc---
Confidence 999999999999999755 7999999999999999999999999988877 59999987777666666655544421
Q ss_pred HhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHH
Q 011275 236 YKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSV 315 (489)
Q Consensus 236 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (489)
+.+. ++..+..+++++++.+..... .....+.-..+. ..-+.+....
T Consensus 251 --~~~~----------------------------~~~~~~~~~~~Ll~dP~I~~~-agai~~~n~~la--fLePtlslwm 297 (464)
T KOG3764|consen 251 --EMDP----------------------------DSTEQGTPMWSLLMDPYILLI-AGAITFSNSSLA--FLEPTLSLWM 297 (464)
T ss_pred --ccCc----------------------------cccccCccHHHHHhCchHhhh-hcchhhccchHH--HhCcccHHHH
Confidence 0000 011122345555554443321 111111111110 0011111122
Q ss_pred HHh---cCCCcchHHHHHHHHHHHHHHHHHHHHhhcC--CchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHH
Q 011275 316 FKS---AGLSSGLANVFVGIANLLGSVVAMVLMDKLG--RKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGML 390 (489)
Q Consensus 316 ~~~---~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~g--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (489)
.+. .+...|+..++.++...+|+.+.|.+.||++ |......+.+..+++....-.+ ......++...++.
T Consensus 298 ~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~-----~~~~~L~vp~~~l~ 372 (464)
T KOG3764|consen 298 LETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFA-----TSIAQLWVPNFGLG 372 (464)
T ss_pred HHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhh-----hhHHHHhhhhHHHH
Confidence 222 3334677888889999999999999999999 4333333333333222211111 11112222222222
Q ss_pred HHHHHHhcCccccccccccccCCch---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Q 011275 391 MFVLTFALGAGPVPSLLLPEIFPSR---IRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVA 464 (489)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 464 (489)
+.+...-....|... +..|.-..+ .-+...++....-.++.+++|.+.+.+...+|..|...+.+...++-..
T Consensus 373 ~~i~~~dasl~P~l~-~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyap 448 (464)
T KOG3764|consen 373 FGIGLADASLIPTLG-YLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAP 448 (464)
T ss_pred HHHHHHHHHHhhhhH-HhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHH
Confidence 211111112223222 233332223 4567788887777778888888888888899999888888877665543
No 95
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.6e-18 Score=161.74 Aligned_cols=372 Identities=17% Similarity=0.208 Sum_probs=243.2
Q ss_pred HHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHH-
Q 011275 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS- 135 (489)
Q Consensus 57 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~- 135 (489)
+.--++.|......++.+|.+.+-++++. .+.+++...++.||.+++++.|.+.+|+|+|+.++.+..++++|+.+.
T Consensus 19 t~lFfl~G~~~~l~diLip~l~~~f~ls~--~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~ 96 (422)
T COG0738 19 TSLFFLWGFITCLNDILIPHLKEVFDLTY--FEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFW 96 (422)
T ss_pred HHHHHHHHHHhhcchhhHHHHHHHhCccH--HHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHh
Confidence 33335667777778889999999988764 466899999999999999999999999999999999999999999998
Q ss_pred --HhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccC----------
Q 011275 136 --ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI---------- 203 (489)
Q Consensus 136 --~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~---------- 203 (489)
+...+|..++++-++.|.|.|...+.+..|++.+.|+++..+.+++.+..+.+|.+.+|+++..+...
T Consensus 97 pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~ 176 (422)
T COG0738 97 PAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQ 176 (422)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHH
Confidence 46788999999999999999999999999999999998888899999999999999999987654321
Q ss_pred --------CchhHHHHHHHHHHHHHHHHHhhc--ccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCC
Q 011275 204 --------AGWWRICFWVSIVPAAILCLAMVF--CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDG 273 (489)
Q Consensus 204 --------~~~wr~~f~~~~~~~~~~~~~~~~--~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (489)
...|+++|...+...+++.+.... .||.+ .++ +++.+.
T Consensus 177 ~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~--------~~~------------------------~~~~~~ 224 (422)
T COG0738 177 ILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQ--------VAA------------------------PSLGAS 224 (422)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCC--------ccc------------------------cccccc
Confidence 112566666543333322222211 12210 000 000001
Q ss_pred cchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011275 274 DIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGR 350 (489)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~gr 350 (489)
+.....+++++++++.-.++.+++.-........+..|..+. .+.+. .........+..+|.+++.++..|+..
T Consensus 225 ~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~---~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~ 301 (422)
T COG0738 225 GSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEEL---LGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKP 301 (422)
T ss_pred ccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 111456788888888777777766655443333333332221 33332 244556668888999999999999988
Q ss_pred chhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHH
Q 011275 351 KALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWV 430 (489)
Q Consensus 351 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~ 430 (489)
.+.+.+..+...+.++......+ ....+ .+.+. ..+.....|..+....+..| ++-..+.++ ..+.-.
T Consensus 302 ~k~Laf~a~~~ill~~~~~l~~g-----~v~~~----~l~~i-g~F~simfPTIfslal~~l~-~~ts~~s~~-l~maiv 369 (422)
T COG0738 302 EKYLAFYALIAILLLLAVALIGG-----VVALY----ALFLI-GLFNSIMFPTIFSLALKNLG-EHTSVGSGL-LVMAIV 369 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-----hHHHH----HHHHH-HHHhHHHHHHHHHHHHhccC-cccccccee-eeehee
Confidence 88765544333332222222221 11111 11111 11222234555556667777 333333332 333446
Q ss_pred HHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011275 431 INFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKS 477 (489)
Q Consensus 431 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~ 477 (489)
|+.+.|.+.+.+.|..|....+.....+|.+-.++..+.-...|++.
T Consensus 370 GGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV~~~~~~~~~~k~~~ 416 (422)
T COG0738 370 GGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYVLFFALIGKKSKGRL 416 (422)
T ss_pred cchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcccccch
Confidence 88899999999999888777766666666665554444443455553
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.82 E-value=6.1e-18 Score=171.81 Aligned_cols=139 Identities=18% Similarity=0.220 Sum_probs=111.1
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhc-chhhHHHHHhHHHHHHHHHHHHhcc-hHHHHHHHHHHHhh
Q 011275 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTR-NLIGMLLGRFVVGT 153 (489)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr-~GRr~~~~~~~~~~~i~~~l~~~~~-~~~~l~~~R~l~G~ 153 (489)
.+.+++|++.++ .++..+.+........+++|+++|| +|||+++..+.++++++..+++++. +...+.++|+++|+
T Consensus 47 yl~~~lg~s~~~--a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gi 124 (500)
T PRK09584 47 YLVKQLGMSEAD--SITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAV 124 (500)
T ss_pred HHHHHcCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 345788876543 3556665554444556789999999 5999999999999999999998874 45667788999999
Q ss_pred hcccccccccchhcccCCccc--chhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHH
Q 011275 154 GMGLGPTVAALYVTEVSPPFV--RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (489)
Q Consensus 154 g~g~~~~~~~~~i~e~~p~~~--Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~ 217 (489)
|.|...+....++.|++|+++ |+...++++++.++|..+++++++.+.+..+ ||+.|++..+.
T Consensus 125 g~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g-~~~~F~i~~i~ 189 (500)
T PRK09584 125 GNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG-WSVAFALSVVG 189 (500)
T ss_pred hhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC-HHHHHHHHHHH
Confidence 999988888899999998754 4457788889999999999999888877666 79999886543
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.78 E-value=3.3e-16 Score=155.44 Aligned_cols=380 Identities=14% Similarity=0.126 Sum_probs=216.7
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhh----cchhhHHHHHh-HHHHHHHHHHHHhcchHHHH
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGRRRAFQLC-ALPMIIGASISATTRNLIGM 144 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~D----r~GRr~~~~~~-~~~~~i~~~l~~~~~~~~~l 144 (489)
..+.++.+.+++|.+. ...+++.....+...+.+++.|.++| |+|||+.++.. .+...++..+.+++++...+
T Consensus 23 ~~~~l~~yl~~lg~~~--~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~ 100 (477)
T TIGR01301 23 QLSLLTPYVQELGIPH--AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHL 100 (477)
T ss_pred HHHHHHHHHHHcCCCH--HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhh
Confidence 3334444667778754 45677888888888999999999999 59999999875 55555555666676664322
Q ss_pred H------------HHHHHH-----hhhcccccccccchhcccCCcccc--hhhhhHHHHHHHHHHHHHHHhhcccc--c-
Q 011275 145 L------------LGRFVV-----GTGMGLGPTVAALYVTEVSPPFVR--GTYGAFIQIATCLGLMGSLLIGIPVK--E- 202 (489)
Q Consensus 145 ~------------~~R~l~-----G~g~g~~~~~~~~~i~e~~p~~~R--g~~~~~~~~~~~~G~~~~~~~~~~~~--~- 202 (489)
+ +.+++. .++.....+...++++|.+|+++| +.+.++.+....+|.++|..+|.... .
T Consensus 101 ~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~ 180 (477)
T TIGR01301 101 FGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKI 180 (477)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHh
Confidence 1 123333 346666777788999999999876 57899998888999888888775421 0
Q ss_pred -----------CCchhHHHHHHHHHHHHHH-HHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccC
Q 011275 203 -----------IAGWWRICFWVSIVPAAIL-CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRG 270 (489)
Q Consensus 203 -----------~~~~wr~~f~~~~~~~~~~-~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 270 (489)
....-|+.|++.++..++. .+..+.++|.|-. ..++.++ ++.++..+ .+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~--~~~~~~~--~~~~~~~~---------------~~ 241 (477)
T TIGR01301 181 FPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLI--GSDDFIN--SEAAPPSK---------------HG 241 (477)
T ss_pred cccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCC--ccccchh--hhcccccc---------------cc
Confidence 0113588888865544443 3445567887521 0111000 00000000 00
Q ss_pred CCCcchhHHHhhhc--cchhHHHHHHHHHHHHhhhhHHHHHHhHHH-----HHHhcCC-----Cc----c-hHHHHHHHH
Q 011275 271 DDGDIVKFEELLYG--RHFRVVFIGSTLFALQQLSGINAIFYFSSS-----VFKSAGL-----SS----G-LANVFVGIA 333 (489)
Q Consensus 271 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~----~-~~~~~~~i~ 333 (489)
.......+.+.+++ +.++.+.+.-++.++ ++....+|.++ +++.... +. | +..+..++.
T Consensus 242 ~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~----a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~ 317 (477)
T TIGR01301 242 EEAFFGELFGAFKYLPRPVWILLLVTCLNWI----AWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVV 317 (477)
T ss_pred hhhhHHHHHHHHHHCCHHHHHHHHHHHHHHH----HHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 00000111122221 223333322222222 22222222222 2221110 11 1 234455566
Q ss_pred HHHHHHHHHHHHhhcCC-chhHHHhhHHHHHHHHHHHHHhhc-----c--------CCCchhhHHHHHHHHHHHHHHhcC
Q 011275 334 NLLGSVVAMVLMDKLGR-KALLQWSFFSMAVSMAIQVAASSS-----Y--------IPGSASLYLSVGGMLMFVLTFALG 399 (489)
Q Consensus 334 ~~~g~~~~g~l~dr~gr-r~~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~~~~~~~~~~~~~~~~~~~~~ 399 (489)
+.+.+++-.++.+|+|+ |+....+.+..++++....+.... . .+.....+..+......++.++.
T Consensus 318 ~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~- 396 (477)
T TIGR01301 318 LGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAI- 396 (477)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHH-
Confidence 66777777888999985 666577766666666655433320 0 01111112222222223333322
Q ss_pred ccccccccccccCCch--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchhHHHHHHHHHHHHHHHHhhcccCCC
Q 011275 400 AGPVPSLLLPEIFPSR--IRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG--PQLLYSIFGTFCLMAVAFVKRNVVETKG 475 (489)
Q Consensus 400 ~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~pet~~ 475 (489)
...++++++++..|++ ..|..+|+.+.+-.+.+.+.....+.+.+..| ....+.+-++..+++.+...+.+|+++.
T Consensus 397 ~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 397 TYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 2347888888888854 44999999998888888888876666555555 3466777777888888888888998764
No 98
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.78 E-value=9.3e-18 Score=168.40 Aligned_cols=372 Identities=17% Similarity=0.151 Sum_probs=232.0
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHH-HH
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL-GR 148 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~-~R 148 (489)
+....+.+.++++.+.++ .+|+.++....+.+..++.+.+.||+|.|++.+.+.++..+|.++++++++++++++ .-
T Consensus 65 ~Gv~~~~~~~~f~~s~~~--~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~g 142 (509)
T KOG2504|consen 65 FGLLFEELMDYFGSSSSQ--IAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFG 142 (509)
T ss_pred ehhhHHHHHHHhCCCccH--HHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 346678899998877664 679999999888999999999999999999999999999999999999999988775 68
Q ss_pred HHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHH-hhc
Q 011275 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA-MVF 227 (489)
Q Consensus 149 ~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~ 227 (489)
++.|+|.|..+......+..+| +++|+.++++...+..+|..+-+.+.-.+.+..| ||+.+++.....+..++. ...
T Consensus 143 vi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G-~r~~~l~~~~~~l~~~~~~~~~ 220 (509)
T KOG2504|consen 143 VIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG-WRGALLIFGGISLNVLVAGALL 220 (509)
T ss_pred HHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999988888888665 5579999999999999996655555555556667 577766543333333333 333
Q ss_pred ccCChHHHHhcCCHHHHHHHHHHHh----------------CCC-chh---HHHHHHHhhccCCC--Ccch-hH---HHh
Q 011275 228 CAESPHWLYKKGRTAEAEAEFEKLL----------------GGS-HVK---SSLAELSKLDRGDD--GDIV-KF---EEL 281 (489)
Q Consensus 228 ~pEsp~~l~~~~~~~~~~~~l~~~~----------------~~~-~~~---~~~~~~~~~~~~~~--~~~~-~~---~~~ 281 (489)
-|.+++- +.+ + ++..+... +.. ..+ ...++..+.+++.. ..+. .. .++
T Consensus 221 rp~~~~~---~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 294 (509)
T KOG2504|consen 221 RPLSPPK---KPN-E--EKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSL 294 (509)
T ss_pred CCCCcCC---Cch-h--hhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHH
Confidence 3433210 000 0 00000000 000 000 00001111111000 1111 11 356
Q ss_pred hhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHH--H
Q 011275 282 LYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQ--W 356 (489)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~--~ 356 (489)
++++.+.....+..+. ..+++...++++...+..+.+. .......++.+.+|.++.|++.|+...++... +
T Consensus 295 l~~~~fl~~~~~~~~~----~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~ 370 (509)
T KOG2504|consen 295 LKDPKFLLLALSNLFA----YLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLL 370 (509)
T ss_pred HcCchHHHHHHHHHHH----HHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHH
Confidence 6665554443333322 2233444455566556666553 35667788999999999999999998544333 3
Q ss_pred hhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHH
Q 011275 357 SFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVG 436 (489)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~ 436 (489)
+.+..+++....... ........ ..++++...+ ....+....+.|+.+.+.-+.+.|+...+.-++..++|
T Consensus 371 ~ll~~gl~~~~~p~~------~~~~~l~~--~~~~fG~~~g-~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gp 441 (509)
T KOG2504|consen 371 TLLIAGLARLFLPFA------TTYVGLIV--FSILFGFCVG-SFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGP 441 (509)
T ss_pred HHHHHHHHHHHHHHh------ccHHHHHH--HHHHHHHHHH-HHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCc
Confidence 333333332111111 11111111 1111111111 11224445788999999999999999999999999999
Q ss_pred HHHHHHHHHhC-CchhHHHHHHHHHHHHH
Q 011275 437 LLFLRLLEQLG-PQLLYSIFGTFCLMAVA 464 (489)
Q Consensus 437 ~~~~~~~~~~g-~~~~~~~~~~~~~~~~~ 464 (489)
.+.+.+.|..+ +...|.+.+.+.+++..
T Consensus 442 Piag~~~d~tg~Y~~~f~~~g~~~~~s~~ 470 (509)
T KOG2504|consen 442 PIAGLLYDITGNYDHAFYFCGLCFLLSAV 470 (509)
T ss_pred ccceeeeeccCCeeeehhhcChHHHHHHH
Confidence 88888778776 66677777776666653
No 99
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.78 E-value=1.8e-17 Score=166.91 Aligned_cols=368 Identities=17% Similarity=0.152 Sum_probs=210.5
Q ss_pred HHhhhhccceeeccch-hhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcch-----hhHHHHHhHHHHH-HH
Q 011275 59 SSFLFGYHLGVVNEPL-ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-----RRRAFQLCALPMI-IG 131 (489)
Q Consensus 59 ~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~G-----Rr~~~~~~~~~~~-i~ 131 (489)
..+..|.. ......+ +.+.+++|++.++ .+...+...+.+.+-.+ +|+++||++ ||+.++++.++.+ +.
T Consensus 34 ~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~--i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~ 109 (468)
T TIGR00788 34 VLFVKGIA-GLMRLPLSPMLTDDLGLDGAR--YQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAIL 109 (468)
T ss_pred HHHHhhHH-HHhhhhhhHHHHHhcCCCHHH--HHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHH
Confidence 34556666 5555454 4455578987654 45678888888888666 999999998 8888877776653 33
Q ss_pred HHHHHhcchHHHHH-HHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHH---HHHHHHHHHhhcccccCCchh
Q 011275 132 ASISATTRNLIGML-LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIAT---CLGLMGSLLIGIPVKEIAGWW 207 (489)
Q Consensus 132 ~~l~~~~~~~~~l~-~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~---~~G~~~~~~~~~~~~~~~~~w 207 (489)
....+..++..... +.+++.+++.+..-.....+..|..+ ++++...+.....+ .+|.++++.+++.+.+..+ |
T Consensus 110 ~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~-~ 187 (468)
T TIGR00788 110 YGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTL-T 187 (468)
T ss_pred HHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcC-c
Confidence 22233334544444 48999999999888899999999999 66655544444434 4688888888777666556 7
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccch
Q 011275 208 RICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (489)
Q Consensus 208 r~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (489)
|..|++.+...++..+...+++|++... +.+.++.+...... ......+..+ .......+.++++..
T Consensus 188 ~~~f~~~a~l~ll~~~~~~~~~E~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~-------~~~~~l~~~l~~~~i 254 (468)
T TIGR00788 188 RILFLITAALLLLQLFVSNLSKERRAFV--RPRIGTYLEMNMAL----LTLGVLANVK-------VQILGLRGAIQLLEI 254 (468)
T ss_pred chHHHHHHHHHHHHHHHHHhcccccccc--cccccccchhhhhh----hhhhHHHHHH-------HHHHHHHHHHhcHHH
Confidence 9998876555555555566778863100 00100000000000 0000000000 001122333444444
Q ss_pred hHHHHHHHHHHHHhhhh-HHHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHH
Q 011275 288 RVVFIGSTLFALQQLSG-INAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMA 366 (489)
Q Consensus 288 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~ 366 (489)
+......++. +....+ .+..+++.+..++......|......+++.+++..+.+++.+|++.|+++..+.+...++..
T Consensus 255 ~~~l~fifl~-~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~ 333 (468)
T TIGR00788 255 AKPLIFIFLS-YANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSL 333 (468)
T ss_pred HHHHHHHHHH-HhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHh
Confidence 3322222220 111111 11111222222233333456667778899999999999999999999988777665555443
Q ss_pred HHHHHhhccC--CCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 367 IQVAASSSYI--PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE 444 (489)
Q Consensus 367 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (489)
.......... ......+.......+..+.+.+...|. ..++.++.|++.+++..++..++.+++..+++.+.+.+.+
T Consensus 334 ~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~ 412 (468)
T TIGR00788 334 FDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLME 412 (468)
T ss_pred CceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111000000 000001111111222233333333343 4578899999999999999999999999999977777777
Q ss_pred HhC
Q 011275 445 QLG 447 (489)
Q Consensus 445 ~~g 447 (489)
..|
T Consensus 413 ~~g 415 (468)
T TIGR00788 413 TIG 415 (468)
T ss_pred HcC
Confidence 777
No 100
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.76 E-value=2.1e-15 Score=138.86 Aligned_cols=349 Identities=18% Similarity=0.217 Sum_probs=234.5
Q ss_pred cceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHH
Q 011275 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGML 145 (489)
Q Consensus 66 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~ 145 (489)
..+.+.+.++++..|+|.|.+ ..|++++.-.+.+.+.+++..+++.|+|.++.+..++++.++|..+=... +...++
T Consensus 27 ~itsvgPLL~~Ir~~~gls~s--~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~ 103 (395)
T COG2807 27 AITSVGPLLDEIRQDLGLSFS--VAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLF 103 (395)
T ss_pred hhhhhhhhHHHHHHHhcccHH--HHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHH
Confidence 356688899999999999865 45899999999999999999999999999999999999999999988777 777889
Q ss_pred HHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHh
Q 011275 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (489)
Q Consensus 146 ~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 225 (489)
.+-.+.|.|.+......+..+.+.+|++ -+..+++|.+....|..+++.+..++.++.+.||.....=..++++.++.+
T Consensus 104 ~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~W 182 (395)
T COG2807 104 LGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIW 182 (395)
T ss_pred HHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999875 678999999999999999988888887776557877665456666665554
Q ss_pred hcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhH
Q 011275 226 VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGI 305 (489)
Q Consensus 226 ~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (489)
+ |... |++ .+. .+. +..+...+++++.-|.+.+ .+..+ ...+
T Consensus 183 l--Pq~~-----r~~-~~~-----------------------~~~---~~~~~~~vw~~~~aW~vtL---fmGlq-S~~~ 224 (395)
T COG2807 183 L--PQAL-----REQ-AAS-----------------------IAT---KLVSVRKVWRSPLAWQVTL---FMGLQ-SLLY 224 (395)
T ss_pred h--hhcc-----ccc-ccc-----------------------ccc---ccccccccccCchhHHHHH---HHHhh-HHHH
Confidence 3 2211 110 000 000 0011122444444443322 22223 2334
Q ss_pred HHHHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhc-CCchhHHHhhHHHHHHHHHHHHHhhccCCCchh
Q 011275 306 NAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKL-GRKALLQWSFFSMAVSMAIQVAASSSYIPGSAS 381 (489)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (489)
+...-|.|.++.+.|.+. |.......+..++.++....+.+|. .+|+........+.++.+.+.+.+.. ...
T Consensus 225 Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~----~~~ 300 (395)
T COG2807 225 YIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQ----LPI 300 (395)
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhh----HHH
Confidence 455567788888888874 4455566678888899999999975 45555544444444444443322211 111
Q ss_pred hHHHHHHHHHH--HHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHH
Q 011275 382 LYLSVGGMLMF--VLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP-QLLYSIFGTF 458 (489)
Q Consensus 382 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~ 458 (489)
.+.. ++.+ +..|.++. ..+....-.++..+.-.|+.+.++++.+..+|.+++.+.|..|. ...+..+..+
T Consensus 301 lw~~---llG~G~G~~F~laL----~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~ 373 (395)
T COG2807 301 LWAL---LLGLGQGGAFPLAL----TLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALA 373 (395)
T ss_pred HHHH---HHhCccchHHHHHH----HHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHH
Confidence 2211 1111 11111111 11122223467788899999999999999999999999998764 3445555555
Q ss_pred HHHHHHHHH
Q 011275 459 CLMAVAFVK 467 (489)
Q Consensus 459 ~~~~~~~~~ 467 (489)
.+...+..+
T Consensus 374 ~i~m~i~Gl 382 (395)
T COG2807 374 TLLMLIFGL 382 (395)
T ss_pred HHHHHHHHh
Confidence 544444443
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.75 E-value=3.4e-16 Score=157.56 Aligned_cols=331 Identities=13% Similarity=0.141 Sum_probs=186.6
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhc----chhh-HHHHHhHHHHHHHHHHHHhcch------HHHH
Q 011275 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRR-RAFQLCALPMIIGASISATTRN------LIGM 144 (489)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr----~GRr-~~~~~~~~~~~i~~~l~~~~~~------~~~l 144 (489)
.+..++|++. ...|.+.....+..++..++.|.++|| +||| |.++.+.+..++...+....++ ...+
T Consensus 35 ~~t~~~gls~--~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~ 112 (444)
T PRK09669 35 FYTDVFGLSA--AIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYA 112 (444)
T ss_pred HHHHhcCCCH--HHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 3445667764 456888888888999999999999998 8884 5555676777776665554443 3455
Q ss_pred HHHHHHHhhhcccccccccchhcccC-CcccchhhhhHHHHHHHHHHHHHHHhhcccc----c--CCchhHHHHHHHHHH
Q 011275 145 LLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVK----E--IAGWWRICFWVSIVP 217 (489)
Q Consensus 145 ~~~R~l~G~g~g~~~~~~~~~i~e~~-p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~----~--~~~~wr~~f~~~~~~ 217 (489)
++.-++.+.+.........++.+|+. ++++|.+..++-.....+|..+++.+..++. . ....|+..+.+.++.
T Consensus 113 ~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii 192 (444)
T PRK09669 113 CVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLL 192 (444)
T ss_pred HHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 56666667666566556667889998 5688998888877777776555544332211 1 111267776655444
Q ss_pred HHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHH
Q 011275 218 AAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTL 296 (489)
Q Consensus 218 ~~~~~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (489)
..+..+. .+..+|.++ +++ +++......++..+++++++......++
T Consensus 193 ~~v~~~~~~~~~~e~~~-------~~~-------------------------~~~~~~~~~~~~~~~n~~~~~l~~~~~~ 240 (444)
T PRK09669 193 GVVLFFCCFFMTKERYT-------PEV-------------------------DNSSSVWKDLKLLLGNSQWRIMFIFNVV 240 (444)
T ss_pred HHHHHHHHhCCeEEecC-------CCC-------------------------cCCCCHHHHHHHHhCCchHHHHHHHHHH
Confidence 4333332 233333210 000 0000011234556677777766554333
Q ss_pred HHHHhhhhHHHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccC
Q 011275 297 FALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYI 376 (489)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (489)
.............||..+..+... ..........+..+++.++.+++.||+|+|+....+.....+.........
T Consensus 241 ~~~~~~~~~~~~~y~~~~~~~~~~-~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~---- 315 (444)
T PRK09669 241 LLTAVVTRGGATLYYVNYVLLRPD-LATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIP---- 315 (444)
T ss_pred HHHHHHHHhhhhheeeeeecCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC----
Confidence 322221111122233332221100 012233344566778888999999999999988766544443222222111
Q ss_pred CCchhhHHHHHHHHHHHHHHhcCccccccccccccCC-------chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 011275 377 PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFP-------SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP 448 (489)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 448 (489)
++.. +......++..++.. ...+..+.+.+|..+ .+..+...++.+.+..++..+++.+.+.+++..|+
T Consensus 316 ~~~~--~~~~~~~~i~g~~~~-~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 316 PSNV--WLIFALNILFNFIQN-LTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred cchH--HHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1111 111112222223222 234667778888875 23345667888888899999999888888876654
No 102
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.73 E-value=9.7e-15 Score=145.60 Aligned_cols=144 Identities=22% Similarity=0.231 Sum_probs=110.1
Q ss_pred eccchhhh-hhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcc-hhhHHHHHhHHHHHHHHHHHHhcc-hHHHHHH
Q 011275 70 VNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCALPMIIGASISATTR-NLIGMLL 146 (489)
Q Consensus 70 ~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~-GRr~~~~~~~~~~~i~~~l~~~~~-~~~~l~~ 146 (489)
+...+|.+ .+++|++.+ +.+.+.+.+.....+++++.|+++||+ |||+++.++.++.+++.++.+... +...+.+
T Consensus 28 ~~~~L~~yL~~~lgls~~--~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l 105 (493)
T PRK15462 28 MRALLILYLTNQLKYDDN--HAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYL 105 (493)
T ss_pred HHHHHHHHHHHhcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 33445544 445677644 557788888888889999999999999 999999999999999987776543 2233444
Q ss_pred HHHHHhhhcccccccccchhcccCCcc--cchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHH
Q 011275 147 GRFVVGTGMGLGPTVAALYVTEVSPPF--VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (489)
Q Consensus 147 ~R~l~G~g~g~~~~~~~~~i~e~~p~~--~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~ 216 (489)
+-.+.++|.|...+....+++|.+|++ +|+...++.....++|..++|++...+.+..+ ||+.|.++++
T Consensus 106 ~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G-w~~~F~iaai 176 (493)
T PRK15462 106 SLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS-WAMGFGLAAV 176 (493)
T ss_pred HHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-hHHHHHHHHH
Confidence 444455666666677778899999976 79889999999999999999999888876666 7999987654
No 103
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.73 E-value=5.3e-15 Score=145.00 Aligned_cols=341 Identities=18% Similarity=0.196 Sum_probs=197.2
Q ss_pred ceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcch-hhHHHHHhHHHHHHHHHHHHhcchHHHHH
Q 011275 67 LGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-RRRAFQLCALPMIIGASISATTRNLIGML 145 (489)
Q Consensus 67 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~G-Rr~~~~~~~~~~~i~~~l~~~~~~~~~l~ 145 (489)
.+...|.++...++.|++. .|.|.+.+...+...++++++|.++||.+ +|+++.++.++.++...+....++++.++
T Consensus 18 ~G~~~p~~~~~L~~~G~s~--~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~ 95 (400)
T PF03825_consen 18 YGAFLPYLPLYLESRGFSG--TQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLF 95 (400)
T ss_pred HHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3445667777888888764 46799999999999999999999999986 57777777777777666777788998888
Q ss_pred HHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHH-----HhhcccccCCchhHHHHHHHHHHHHH
Q 011275 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL-----LIGIPVKEIAGWWRICFWVSIVPAAI 220 (489)
Q Consensus 146 ~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~-----~~~~~~~~~~~~wr~~f~~~~~~~~~ 220 (489)
+.-++..+...+..|...++..+...++++ --+-+-+..++|...+. .+.... +..+ ..+.+++.....++
T Consensus 96 ~~~~l~~~~~~p~~pl~dsi~~~~~~~~~~--~YG~iRlwGSiGf~~~~~~~~~~~~~~~-~~~~-~~~~~~i~~~~~~l 171 (400)
T PF03825_consen 96 VIMLLFSFFFSPTMPLSDSIALSYLGDRGK--DYGRIRLWGSIGFIVAALAFGGLLGGYL-GISG-TSLIFYIAAILSLL 171 (400)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHcccccC--CCCcchhhhhHHHHHHHHHHHHHHHhhh-cccc-ccHHHHHHHHHHHH
Confidence 887778877777777777777777653221 12222222333322221 111111 1111 23345554444444
Q ss_pred HHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHH
Q 011275 221 LCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQ 300 (489)
Q Consensus 221 ~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (489)
.....+.+|++|. +++.++. .++....+..+++++++....++..++....
T Consensus 172 l~~~~l~lp~~~~----~~~~~~~-------------------------~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~ 222 (400)
T PF03825_consen 172 LAGFALFLPKTPP----KRSAKES-------------------------VKKLLGLDALKLLKNPRFLVFLLAAFLIGIS 222 (400)
T ss_pred HHHHHHhCCCCcc----ccccCCC-------------------------cccccchHHHHHhcCccHHHHHHHHHHHHHH
Confidence 4444556787751 1110000 0000111234567766665544443333222
Q ss_pred hhhhHHHHHHhHHHHHHhcC-CCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccC
Q 011275 301 QLSGINAIFYFSSSVFKSAG-LSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYI 376 (489)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (489)
. .....|.+..+++.+ .+. +.......+.+++.-+..+++..|+|.|+++.++.....+=..+......
T Consensus 223 ~----~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~--- 295 (400)
T PF03825_consen 223 H----AAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD--- 295 (400)
T ss_pred H----HHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 1 112223334455555 332 33333445678888889999999999999887765544433333322211
Q ss_pred CCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCch
Q 011275 377 PGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHW-VINFFVGLLFLRLLEQLGPQL 450 (489)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~ 450 (489)
+...............+..|... ......|+.|..|++.|++++++...+.+ +++.+++.+.+.+.+..|...
T Consensus 296 ~~~~~~~~~~l~q~lhG~tf~~~-~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~ 369 (400)
T PF03825_consen 296 PWPFIVALQLLGQLLHGLTFGLF-HAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARG 369 (400)
T ss_pred CcHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchh
Confidence 11111111111122334443322 12334588999999999999999888754 577777778888888877543
No 104
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.70 E-value=3.9e-14 Score=141.59 Aligned_cols=355 Identities=17% Similarity=0.202 Sum_probs=200.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhH-HHHHHHHHHHHhc-ch-HHHHHHHHHHHhhhcccccccccchh
Q 011275 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA-LPMIIGASISATT-RN-LIGMLLGRFVVGTGMGLGPTVAALYV 166 (489)
Q Consensus 90 ~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~-~~~~i~~~l~~~~-~~-~~~l~~~R~l~G~g~g~~~~~~~~~i 166 (489)
.++..++..+-.++-.++.|.++|+-|+||-++... ++..+.+.+..+. ++ ++...+.-++.-++.+.......+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 355666666777788999999999999887776544 4444455555443 33 33333444444456666777788899
Q ss_pred cccCCcccc--------------------------hhhhhHHHHHHHHHHHHHHHhhcccccCCc-----h--hHHHHHH
Q 011275 167 TEVSPPFVR--------------------------GTYGAFIQIATCLGLMGSLLIGIPVKEIAG-----W--WRICFWV 213 (489)
Q Consensus 167 ~e~~p~~~R--------------------------g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-----~--wr~~f~~ 213 (489)
.|+.+++.+ ++.++.-.....+|.++..++...+....+ . -|..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 999999988 888887766666665555554433211111 1 3666655
Q ss_pred HHHHHHHH-HHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHH
Q 011275 214 SIVPAAIL-CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (489)
Q Consensus 214 ~~~~~~~~-~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (489)
.++--+++ +...+++||.|+- +..++..+.+ .....++.+ .+++..+.++....++
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~~----~~~~~~~~~~---------~~g~~~l~~----------t~k~~~~~~~~~~fLi 288 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPGP----RPLPSGSSYL---------RFGFKRLWR----------TFKEIRKLRQLFLFLI 288 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCCC----CCCCcchhHH---------HHHHHHHHH----------HHHHHHhChHHHHHHH
Confidence 44333333 3334556665431 0001101000 011111111 1222222333333333
Q ss_pred HHHHHHHHhhhhHHHHHHhHH-HHHHhcCCCcc---hHHHHHHHHHHHHHHHHHHHHhhcCCc--hhHHHhhHHHHHHHH
Q 011275 293 GSTLFALQQLSGINAIFYFSS-SVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRK--ALLQWSFFSMAVSMA 366 (489)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~grr--~~~~~~~~~~~~~~~ 366 (489)
+.+++.- +.+.+..... ...+..+++.. ...+...+..++|+++.+++.||+|.| +++........+..+
T Consensus 289 a~~l~~d----g~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~ 364 (477)
T PF11700_consen 289 AYFLYSD----GVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPL 364 (477)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 3333321 2222222111 11224555433 455666788999999999999999999 666555444322222
Q ss_pred HHHH--Hhhcc-CCCchhhHHHHHHHHHHHHHHhc-CccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 367 IQVA--ASSSY-IPGSASLYLSVGGMLMFVLTFAL-GAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRL 442 (489)
Q Consensus 367 ~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (489)
.... ..... ..+....++. .. ..+..+ +..+....+.+|+.|++..+.-.|+....++..++++|.+++.+
T Consensus 365 ~g~~G~~~~~~g~~~~~~f~~~--a~---~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i 439 (477)
T PF11700_consen 365 YGLFGFWPSFFGLKSPWEFWVL--AV---LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLI 439 (477)
T ss_pred HHHHHhhhcccCcccHHHHHHH--HH---HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 11110 1111222211 11 111222 23456778999999999999999999999999999999999998
Q ss_pred HHHhC-CchhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011275 443 LEQLG-PQLLYSIFGTFCLMAVAFVKRNVVETKGKS 477 (489)
Q Consensus 443 ~~~~g-~~~~~~~~~~~~~~~~~~~~~~~pet~~~~ 477 (489)
.+..+ .+..+....++.+++.+++ ..+++.|++.
T Consensus 440 ~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~g~~ 474 (477)
T PF11700_consen 440 TDATGSQRYGFLFLLVLFLIGLILL-FFVDVEKGRE 474 (477)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHH-hhccchhhhh
Confidence 88776 4567777777777776665 5677777764
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.69 E-value=3e-15 Score=151.81 Aligned_cols=346 Identities=12% Similarity=0.042 Sum_probs=182.8
Q ss_pred eeccchhhhhh-hcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhh----cchh-hHHHHHhHHHHHHHHHHHHhcch--
Q 011275 69 VVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGR-RRAFQLCALPMIIGASISATTRN-- 140 (489)
Q Consensus 69 ~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~D----r~GR-r~~~~~~~~~~~i~~~l~~~~~~-- 140 (489)
.+++.++.+.. .+|++ ....|.+....-+--++..++.|.++| |+|| ||.++.+.+..+++..+.-..++
T Consensus 24 ~~~~~l~~yyt~v~Gls--~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~ 101 (473)
T PRK10429 24 IVYMYLMYYYTDVVGLS--VGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFE 101 (473)
T ss_pred HHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCC
Confidence 33444443433 34665 445677777777788899999999999 6799 66666777777776555543331
Q ss_pred ----HHHHHHHHHHHhhhcccccccccchhcccC-CcccchhhhhHHHHHHHHHHHHHHHhhccc----c--cCCchhHH
Q 011275 141 ----LIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPV----K--EIAGWWRI 209 (489)
Q Consensus 141 ----~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~-p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~----~--~~~~~wr~ 209 (489)
+..+++.-++.+++.........++..|+. +++||.+..++-.....+|..+.+.+..++ . +....|++
T Consensus 102 ~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~ 181 (473)
T PRK10429 102 GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQM 181 (473)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 334555666667777777777778889999 589999988886555555533332222111 1 11112566
Q ss_pred HHHHHHHHHHHHH-HHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchh
Q 011275 210 CFWVSIVPAAILC-LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (489)
Q Consensus 210 ~f~~~~~~~~~~~-~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (489)
..++.++..++.. +..+..+|.++ ..+.++ .++++......++.++++++++
T Consensus 182 ~~~i~~~~~~~~~~~~~~~~~e~~~----~~~~~~-----------------------~~~~~~~~~~~~~~~~~n~~~~ 234 (473)
T PRK10429 182 FTLVLIAFFIVSTIITLRNVHEVYS----SDNQVS-----------------------AEGSHLTLKDIVALIYKNDQLS 234 (473)
T ss_pred HHHHHHHHHHHHHHHHHcCceecCC----cccccc-----------------------ccccCCCHHHHHHHHhcCHHHH
Confidence 6555444333322 22333455321 000000 0000000111233345566665
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHH
Q 011275 289 VVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (489)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 368 (489)
..+...++.............||..+..+. ....+.......++.+++.++.+++.||+|+|+.+..+.....++....
T Consensus 235 ~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~ 313 (473)
T PRK10429 235 CLLGMALAYNIASNIINGFAIYYFTYVIGD-ADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVL 313 (473)
T ss_pred HHHHHHHHHHHHHHHHhhheeeEEEEECCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 554443333222111111112222211111 0011233344457788888999999999999998877665444443332
Q ss_pred HHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCC-------chhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 011275 369 VAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFP-------SRIRAKAMAVCMSVHWVINFFVGLLFLR 441 (489)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 441 (489)
..... ..+.. .+..+....+...+.+. ..+..+.+.+|..+ .+..|...|....+..++..+++.+.+.
T Consensus 314 ~~~~~-~~~~~--~~~~~i~~~l~g~~~~~-~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 314 LLMGL-AAPHN--ALLIVIAGILLNIGTAL-FWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHhc-cCchh--HHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 11111 11111111222222221 22345567788854 3334557788888888999999988888
Q ss_pred HHHHhCC
Q 011275 442 LLEQLGP 448 (489)
Q Consensus 442 ~~~~~g~ 448 (489)
+++..|+
T Consensus 390 ~l~~~Gy 396 (473)
T PRK10429 390 VLGLIGY 396 (473)
T ss_pred HHHHcCC
Confidence 7776554
No 106
>PRK09848 glucuronide transporter; Provisional
Probab=99.69 E-value=1.5e-14 Score=145.89 Aligned_cols=328 Identities=14% Similarity=0.132 Sum_probs=174.4
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcc----hhhHHH-HHhHHHHHHHHHHHH-h----cch--HHH
Q 011275 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV----GRRRAF-QLCALPMIIGASISA-T----TRN--LIG 143 (489)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~----GRr~~~-~~~~~~~~i~~~l~~-~----~~~--~~~ 143 (489)
.+.+.+|++ ..+.|.+.+...+..++..++.|.++||. |||+.+ ..+.+...+...+.. . ..+ ...
T Consensus 34 y~~~~~gl~--~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (448)
T PRK09848 34 YYTDVAGVG--AAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVY 111 (448)
T ss_pred HHHHHcCCC--HHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHH
Confidence 444555765 45678999999999999999999999986 777755 455554444444432 1 111 222
Q ss_pred HHHHHHHHhhhcccccccccchhcccCCc-ccchhhhhHHHHHHH-----HHHHHHHHhhcccccC-C-ch--hHHHHHH
Q 011275 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQIATC-----LGLMGSLLIGIPVKEI-A-GW--WRICFWV 213 (489)
Q Consensus 144 l~~~R~l~G~g~g~~~~~~~~~i~e~~p~-~~Rg~~~~~~~~~~~-----~G~~~~~~~~~~~~~~-~-~~--wr~~f~~ 213 (489)
.+..-++.+++.+...+....+..|..++ ++|.+..++-..+.. ++..++|+++...... . ++ |+..+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~-- 189 (448)
T PRK09848 112 AYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVL-- 189 (448)
T ss_pred HHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH--
Confidence 34445667777777766666666776654 678887766554323 3444555554322111 1 11 33222
Q ss_pred HHHHHHHH-HHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHH
Q 011275 214 SIVPAAIL-CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (489)
Q Consensus 214 ~~~~~~~~-~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (489)
.+...+. .+.....+|++. + +. ++......++.+++++++.....
T Consensus 190 -~v~~~~~~~~~~~~~~e~~~----~-~~----------------------------~~~~~~~~~~~l~~n~~f~~~~~ 235 (448)
T PRK09848 190 -AIAGMVLYFICFKSTRENVV----R-IV----------------------------AQPSLKISLQTLKRNRPLFMLCI 235 (448)
T ss_pred -HHHHHHHHHHHHcCcEeccC----C-Cc----------------------------cCCCHHHHHHHHhCCchHHHHHH
Confidence 1222222 222233455421 0 00 00001122455677777766554
Q ss_pred HHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHh
Q 011275 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (489)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 372 (489)
..++............++|..+.++......++......++.+++.++.+++.||+|+|+.+..+.....++...+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~ 315 (448)
T PRK09848 236 GALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVS 315 (448)
T ss_pred HHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 44433322222112222333222221111111222333456778888999999999999998888766665554433211
Q ss_pred hccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCch-------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 373 SSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSR-------IRAKAMAVCMSVHWVINFFVGLLFLRLLEQ 445 (489)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (489)
... .+.......+..++.... .+......+|..|.+ .+|...|+.+....++..+++.+.+.+++.
T Consensus 316 ----~~~--~~~~~~~~~l~g~G~~~~-~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 316 ----VWS--LPVALVALAIASIGQGVT-MTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred ----chh--HHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 111111122222222221 234455667776543 468899999999999999998887777765
Q ss_pred hCC
Q 011275 446 LGP 448 (489)
Q Consensus 446 ~g~ 448 (489)
.|+
T Consensus 389 ~G~ 391 (448)
T PRK09848 389 SGY 391 (448)
T ss_pred cCC
Confidence 553
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.68 E-value=2.5e-14 Score=143.31 Aligned_cols=331 Identities=16% Similarity=0.190 Sum_probs=209.7
Q ss_pred hhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhh----cchhhHHHH-HhHHHHHHHHHHHHhc-c-------hHHH
Q 011275 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGRRRAFQ-LCALPMIIGASISATT-R-------NLIG 143 (489)
Q Consensus 77 i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~D----r~GRr~~~~-~~~~~~~i~~~l~~~~-~-------~~~~ 143 (489)
+.+.++++. ...|.+....-+-.++-.++.|.++| |+|||+.++ .+.+..+++.++.... + ....
T Consensus 28 ~~~~~gl~~--~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~ 105 (428)
T PF13347_consen 28 YTDVLGLSP--ALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVW 105 (428)
T ss_pred HHHHcCCCH--HHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHH
Confidence 344446653 34566666666666788889999999 899776655 5677777777776655 3 2334
Q ss_pred HHHHHHHHhhhcccccccccchhcccCC-cccchhhhhHHHHHHHHHHHHHHHhhcccccCCc------hhHHHHHHHHH
Q 011275 144 MLLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG------WWRICFWVSIV 216 (489)
Q Consensus 144 l~~~R~l~G~g~g~~~~~~~~~i~e~~p-~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~------~wr~~f~~~~~ 216 (489)
+.+.-++..++.........++..|+.+ +++|.+..++-..+..+|.++...+...+.+..+ .|++..++.++
T Consensus 106 ~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~i 185 (428)
T PF13347_consen 106 LFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAI 185 (428)
T ss_pred HHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHH
Confidence 5667777788888888888889999998 5789999999888888887544444333221111 37888776555
Q ss_pred HHHHHHHH-hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHH
Q 011275 217 PAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGST 295 (489)
Q Consensus 217 ~~~~~~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (489)
..++..+. .+..+|.+ ++.++ ++++.+-...+++++++|+++......+
T Consensus 186 v~~v~~~i~~~~~ke~~------~~~~~------------------------~~~~~~~~~~~~~~~~nr~~~~l~~~~~ 235 (428)
T PF13347_consen 186 VGLVFFLITFFFVKERS------VEVTE------------------------QEKKISLRDSLRSLFRNRPFRILLLAFF 235 (428)
T ss_pred HHHHHhhhhhheeeecc------ccccc------------------------cccccccccchhhhcccchHHHHHHHHH
Confidence 55544333 34455510 00000 0111112234566777888887776665
Q ss_pred HHHHHhhhhHHHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhcc
Q 011275 296 LFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSY 375 (489)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 375 (489)
+.............||..+..+..+ ..+.......++.+++.++.++++||+|+|+....+....+++.........
T Consensus 236 ~~~~~~~~~~~~~~y~~~~vl~~~~-~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~-- 312 (428)
T PF13347_consen 236 LQWLAFALMNTFLPYYFTYVLGNEG-LISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP-- 312 (428)
T ss_pred HHHhhhhhhhhHHHHHHHHHhcCch-hhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh--
Confidence 5544443333444566655555442 2344555667888899999999999999999988887777776665544431
Q ss_pred CCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCc-------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011275 376 IPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPS-------RIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG 447 (489)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-------~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 447 (489)
+.. +.......+.+++.+ .....++.+.+|+.+. +..|...|+.+....++..+++.+.+.+++..|
T Consensus 313 --~~~--~~~~i~~~l~gi~~~-~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 313 --GSP--WLVLILFILAGIGYG-AFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred --hhH--HHHHHHHHHhHhhhc-ccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 111 111112222222222 2235677788888863 446888899899999999999988777776554
No 108
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.66 E-value=1.3e-15 Score=134.69 Aligned_cols=356 Identities=17% Similarity=0.092 Sum_probs=192.5
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhc-chhhHHHHHhHHHHHHHHHHHH---hcchHHHHHHHHHH
Q 011275 75 ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISA---TTRNLIGMLLGRFV 150 (489)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr-~GRr~~~~~~~~~~~i~~~l~~---~~~~~~~l~~~R~l 150 (489)
.++.+|.++..+ +..++-+.|.+--.+-.++.|++.|| +|-|..-++-++...+|.++.+ ..+.+|.+.++|++
T Consensus 68 ~~fk~d~ni~~a--kftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~ 145 (459)
T KOG4686|consen 68 IDFKLDSNIEYA--KFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFL 145 (459)
T ss_pred hhhhccccccee--eeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhhee
Confidence 344445444433 34577788888888889999999995 7777655555555556666554 57899999999999
Q ss_pred HhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccC----Cch-hHHHHHHHHHHHHHHHHHh
Q 011275 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI----AGW-WRICFWVSIVPAAILCLAM 225 (489)
Q Consensus 151 ~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~----~~~-wr~~f~~~~~~~~~~~~~~ 225 (489)
.|+|.--.......|+.-|+..+|-+.+.++......+|...-..+..++.+. .+. =+...-+-.......+..
T Consensus 146 FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~- 224 (459)
T KOG4686|consen 146 FGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQ- 224 (459)
T ss_pred eccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH-
Confidence 99998777778889999999999999999998777777754322221111110 000 000000000000000000
Q ss_pred hcccCChHHHHhcCC-HHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhh-hccchhHHHHHHHHHHHHhhh
Q 011275 226 VFCAESPHWLYKKGR-TAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELL-YGRHFRVVFIGSTLFALQQLS 303 (489)
Q Consensus 226 ~~~pEsp~~l~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 303 (489)
|-.-....+- ++++++.+.+ ++....+..+..+.. ..+++|.+...++++....+.
T Consensus 225 -----slical~lg~~D~rAerilh~-----------------e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fP 282 (459)
T KOG4686|consen 225 -----SLICALSLGLSDDRAERILHL-----------------EEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFP 282 (459)
T ss_pred -----HHHHHHHhhhhhhHHHHHHhh-----------------hcCcccCCcccccccccCccHHHHHHHHHHHHHHHHH
Confidence 0000000111 1122221111 111111112222221 236677766666665544332
Q ss_pred hHHHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHH-HHHHHHHHHHHhhccCCCchhh
Q 011275 304 GINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS-MAVSMAIQVAASSSYIPGSASL 382 (489)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 382 (489)
.+..-..+.+.-++.+..+++...........+.+++.|.++||+|++...+.+... ..++...+.+. ...+
T Consensus 283 Fi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft-------~lsP 355 (459)
T KOG4686|consen 283 FITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT-------FLSP 355 (459)
T ss_pred HhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh-------hccH
Confidence 222222222222222333344445555566778888999999999999766544222 22222222211 1112
Q ss_pred HHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C---chhHHHHHHH
Q 011275 383 YLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-P---QLLYSIFGTF 458 (489)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~---~~~~~~~~~~ 458 (489)
+.. +.+.+..+++-.. .-|..++-+.|.+.-||+.|++.++++++-.+.|.+.+.+.|+-| + ...|.+.+.+
T Consensus 356 y~~---m~~lGLsysllAc-slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~ 431 (459)
T KOG4686|consen 356 YTS---MTFLGLSYSLLAC-SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLM 431 (459)
T ss_pred HHH---HHHHhhhHHHHHH-HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHH
Confidence 222 2222222222111 124456677899999999999999999999999988777776544 2 2344445555
Q ss_pred HHHHHHHH
Q 011275 459 CLMAVAFV 466 (489)
Q Consensus 459 ~~~~~~~~ 466 (489)
++.....+
T Consensus 432 aL~svgil 439 (459)
T KOG4686|consen 432 ALTSVGIL 439 (459)
T ss_pred HHHHHHHH
Confidence 55554444
No 109
>PRK11462 putative transporter; Provisional
Probab=99.65 E-value=9.1e-14 Score=140.05 Aligned_cols=325 Identities=16% Similarity=0.106 Sum_probs=175.5
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhc----chhhHHHH-HhHHHHHHHHHHHHhcch------HHHHHHHH
Q 011275 80 DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRAFQ-LCALPMIIGASISATTRN------LIGMLLGR 148 (489)
Q Consensus 80 ~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr----~GRr~~~~-~~~~~~~i~~~l~~~~~~------~~~l~~~R 148 (489)
.+|++ ....|.+....-+--++..++.|.++|| +|||+.++ ++.+.++++..+.-..++ ...+.+.-
T Consensus 39 ~~Gl~--~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~ 116 (460)
T PRK11462 39 IFGIP--AGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITY 116 (460)
T ss_pred hhCCC--HHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 34554 4445666666666667999999999995 79876554 565677776666544442 33445555
Q ss_pred HHHhhhcccccccccchhcccCC-cccchhhhhHHHHHHHHHHHHHHHhhcccccCC------chhHHHHHHHHHHHHHH
Q 011275 149 FVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA------GWWRICFWVSIVPAAIL 221 (489)
Q Consensus 149 ~l~G~g~g~~~~~~~~~i~e~~p-~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~------~~wr~~f~~~~~~~~~~ 221 (489)
++..++.........++..|+.+ ++||.+.+++...+..+|..+++++..++.... ..|+....+.+++.++.
T Consensus 117 ~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~ 196 (460)
T PRK11462 117 TLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMM 196 (460)
T ss_pred HHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 66677777766677778899997 789999999998888887665555433321111 12565555444443333
Q ss_pred HHH-hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHH
Q 011275 222 CLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQ 300 (489)
Q Consensus 222 ~~~-~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (489)
.++ ....+|.++ .+ ++ +......++..+++++++.......+....
T Consensus 197 ~~i~~~~~kE~~~-----~~-~~---------------------------~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~ 243 (460)
T PRK11462 197 LAFCFFTTKERVE-----AP-PT---------------------------TTSMREDLRDIWQNDQWRIVGLLTIFNILA 243 (460)
T ss_pred HHHHHhcceeccC-----CC-cc---------------------------CCCHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 322 222333210 00 00 000011234456666666554433333222
Q ss_pred hhhhHHHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCch
Q 011275 301 QLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 380 (489)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (489)
.........||..+.++... ..+.......++.+++.++++++.||+++|+....+.....+...+..... ...
T Consensus 244 ~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~-----~~~ 317 (460)
T PRK11462 244 VCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVP-----MQA 317 (460)
T ss_pred HHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc-----hhH
Confidence 22222223344443332211 112344556678888999999999999999876544333332222221111 111
Q ss_pred hhHHHHHHHHHHHHHHhcCccccccccccccCC-----chhhhhHH--HHHHHHHHHHHHHHHHHHHHHHHHhC
Q 011275 381 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFP-----SRIRAKAM--AVCMSVHWVINFFVGLLFLRLLEQLG 447 (489)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-----~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g 447 (489)
.....+ ..++..+.. ....++.+.+.+|... +..|..+. +....+.+++..+++.+.+.+++..|
T Consensus 318 ~~~~~~-~~~l~g~~~-~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 318 SITMFV-FIFVIGVLH-QLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHH-HHHHHHHHH-HHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111111 111222221 1223444556666644 33555554 55558888999888888777776544
No 110
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.65 E-value=1.1e-15 Score=155.85 Aligned_cols=180 Identities=16% Similarity=0.104 Sum_probs=128.7
Q ss_pred ccchhhhh-hhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHH---HHhcchHHHHHH
Q 011275 71 NEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI---SATTRNLIGMLL 146 (489)
Q Consensus 71 ~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l---~~~~~~~~~l~~ 146 (489)
...+|.+. +++|++.+ +.++......++..++.++.|+++||+|||+++..+.++..++... ...+.+...+++
T Consensus 270 ~~~~p~~l~~~~g~s~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (490)
T PRK10642 270 LTYMPSYLSHNLHYSED--HGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFA 347 (490)
T ss_pred HHHHHHHHHHhcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 34566655 45676543 3456677788899999999999999999999988877654443332 223456777888
Q ss_pred HHHHHhhhcccccccccchhcccCCcccchhhhhH-HHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHh
Q 011275 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (489)
Q Consensus 147 ~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 225 (489)
+|++.|++.+........++.|++|++.||...++ ++.+...|.+.+.+.+ .+.+..++|+.+++...++.++..+..
T Consensus 348 ~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g-~l~~~~~~~~~~~~~~~~~~~i~~~~~ 426 (490)
T PRK10642 348 GLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAA-WLVESTQNLMMPAYYLMVVAVIGLITG 426 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 99999988776666677788999999999998886 6666555544444443 333333346777666556666666666
Q ss_pred hcccCChHHHHhc-----CCHHHHHHHHHHHhC
Q 011275 226 VFCAESPHWLYKK-----GRTAEAEAEFEKLLG 253 (489)
Q Consensus 226 ~~~pEsp~~l~~~-----~~~~~~~~~l~~~~~ 253 (489)
+++||||+|+..+ +|.+|+++.+++++.
T Consensus 427 ~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 427 VTMKETANRPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred HHhccccCCCCCCccccccchhhHHHHhhcccc
Confidence 7789999998755 888999999888763
No 111
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.63 E-value=7.1e-13 Score=125.72 Aligned_cols=398 Identities=15% Similarity=0.118 Sum_probs=236.0
Q ss_pred CCcchHHHHHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHH
Q 011275 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (489)
Q Consensus 44 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~ 123 (489)
+.++++|..++..++-++.-+.+.--+++....+..-++ +.+ ..-|..-+|.+-+..-.+..-|+.||+|-|...++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~--~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSS--AADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chH--HHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 456666666666666666655544333333333444444 222 23467777888888888999999999999999999
Q ss_pred hHHHHHHHHHHHHhcc------hHH--HHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHH
Q 011275 124 CALPMIIGASISATTR------NLI--GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLL 195 (489)
Q Consensus 124 ~~~~~~i~~~l~~~~~------~~~--~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~ 195 (489)
+..+.++|+.+-..+. .++ ....+..+.+.+.-........+..-|+|+++|..+...-.++..+|...+.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 9999999998866543 334 56678888887776666666678888999999999999988888888777777
Q ss_pred hhcccccCC-----chhHH--HHHH-HHHHHHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhh
Q 011275 196 IGIPVKEIA-----GWWRI--CFWV-SIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKL 267 (489)
Q Consensus 196 ~~~~~~~~~-----~~wr~--~f~~-~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 267 (489)
+...+.... ..|.. +|+. .++..+.+.+..+..+|.|+. .+..+.+.
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t-----Pps~s~~~-------------------- 249 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT-----PPSASQAA-------------------- 249 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-----CCchhHhh--------------------
Confidence 654443222 11443 3442 222222222233334443321 11111000
Q ss_pred ccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHH---hcCCCcchHHHHHHHHHHHHHHHHHHH
Q 011275 268 DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFK---SAGLSSGLANVFVGIANLLGSVVAMVL 344 (489)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~g~~~~g~l 344 (489)
++ +..-..+.+++++++++-...+....- ...++..++.....+. ..+...|.......++..+++.+.|.+
T Consensus 250 ~~-~~~f~~si~~~~~n~~F~il~~~ygi~----~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii 324 (480)
T KOG2563|consen 250 LQ-DASFPKSIKSCFKNRQFIILAICYGIG----LGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGII 324 (480)
T ss_pred hh-cCcHHHHHHHHHcCccHHHHHHHHhhh----HHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhh
Confidence 00 111234567788888776554432221 1112233322221222 233456778888888999999999999
Q ss_pred HhhcCCchh-HHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHH
Q 011275 345 MDKLGRKAL-LQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAV 423 (489)
Q Consensus 345 ~dr~grr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 423 (489)
.||...-+. .........++. +...............+. .+.....+..+..|+...+..|..-+..=++..|+
T Consensus 325 ~Dktk~fk~~~~v~~~~~~v~~-~~l~~~t~~~~~~viv~~----t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGl 399 (480)
T KOG2563|consen 325 ADKTKKFKLTTLVLYLFALVGT-LMLLTCTLFLGDSVIVFT----TCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGL 399 (480)
T ss_pred hhhhhhHHHHHHHHHHHHHHHH-HHHHHhhccCCceEehhh----hHHHHHHhhcCCCCcceeeeeeeccccCCccccee
Confidence 999876443 333333333332 111111111111111111 11222234556778888888888877788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhC----CchhHHHHHHHHHHHHHHHHhhcccCCCCCHH
Q 011275 424 CMSVHWVINFFVGLLFLRLLEQLG----PQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQ 479 (489)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~ 479 (489)
.+..+.+.+++..+......+..+ +...-..+...++....+..+..|+-|++..|
T Consensus 400 l~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e 459 (480)
T KOG2563|consen 400 LNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRAE 459 (480)
T ss_pred EEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhhh
Confidence 999999988888887777666655 33334455556666666665556655555444
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.59 E-value=1e-13 Score=132.04 Aligned_cols=274 Identities=16% Similarity=0.131 Sum_probs=161.4
Q ss_pred HhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccC------------
Q 011275 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI------------ 203 (489)
Q Consensus 136 ~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~------------ 203 (489)
+...+|+.++++-++.|.|.+...+....|++++.|++++++.+++.+..+.+|.+++|+++..+...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 45678999999999999999999999999999999999999999999999999999999987654311
Q ss_pred ---CchhHHHHHHHHHHHHHHHHHhh--cccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhH
Q 011275 204 ---AGWWRICFWVSIVPAAILCLAMV--FCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKF 278 (489)
Q Consensus 204 ---~~~wr~~f~~~~~~~~~~~~~~~--~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (489)
..+|+++++..+....+..+.+. -.||.. ++.++ +. .+++. .+.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~------~~~~~--~~--------------------~~~~~---~~~ 133 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQ------EADVA--RV--------------------SSGDT---TQK 133 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC------ccccc--cc--------------------ccccc---cch
Confidence 13589998854333232222222 245431 00000 00 00000 001
Q ss_pred HHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHh---cCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 011275 279 EELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS---AGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKA 352 (489)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~ 352 (489)
++.+++++.+...+..+++..... ....|.+.++.+ .+.+. +........+..+|.++++++.||+|+|+
T Consensus 134 ~~~~~~~~~~l~~~~~f~yvg~e~----~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~ 209 (310)
T TIGR01272 134 TSAFQFTHLVLGALGIFVYVGAEV----SAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR 209 (310)
T ss_pred hhHHhhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 123333444433332223221111 122223333322 24432 34556677888899999999999999998
Q ss_pred hHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHH
Q 011275 353 LLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVIN 432 (489)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~ 432 (489)
.+..+.....+...+.... ......+ .....+++. ....|.......+.+|++ .+++.++. ..+.+|+
T Consensus 210 ~l~~~~~l~~~~~~l~~~~-----~~~~~~~----~~~l~g~~~-s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg 277 (310)
T TIGR01272 210 YLAFNAFLAVLLSIGAALT-----HGYVAMW----FVLALGLFN-SIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGG 277 (310)
T ss_pred HHHHHHHHHHHHHHHHHHc-----CCHHHHH----HHHHHHHHH-HHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcc
Confidence 8776655554443222211 1111111 111122111 122344444566666643 45566664 6788899
Q ss_pred HHHHHHHHHHHHHhCCchhHHHHH
Q 011275 433 FFVGLLFLRLLEQLGPQLLYSIFG 456 (489)
Q Consensus 433 ~~~~~~~~~~~~~~g~~~~~~~~~ 456 (489)
.+.|.+.+.+.|..|...+|.+..
T Consensus 278 ~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 278 AIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred hHHHHHHHHHHHhccchHHHHHHH
Confidence 999999998888888777765433
No 113
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.58 E-value=2.2e-14 Score=138.13 Aligned_cols=369 Identities=19% Similarity=0.196 Sum_probs=183.7
Q ss_pred ceeeccchhhhhhh-cCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHH--HHHHHH-Hh----c
Q 011275 67 LGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI--IGASIS-AT----T 138 (489)
Q Consensus 67 ~~~~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~--i~~~l~-~~----~ 138 (489)
.++..+..+-..+| .|++.+ +.|.+.+...+...+.+++.|.++||.|.|+-++..+.+.. .+.... .+ .
T Consensus 23 ~gi~~pF~~iWL~~~~GLs~~--~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~ 100 (412)
T PF01306_consen 23 WGIFLPFFPIWLTQVAGLSGT--EIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQ 100 (412)
T ss_dssp HHHHHHHHHHHHHHHH---HH--HHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHccccCCCHH--HHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566655554 677644 66999999999999999999999999996665544332221 122211 11 1
Q ss_pred chHH-HHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHH
Q 011275 139 RNLI-GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (489)
Q Consensus 139 ~~~~-~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~ 217 (489)
.|.. ..+++-+..|+...+..++.-+|+.++...+ +.=-+-.-+..++|..++..+++.+.+.. -+..||+....
T Consensus 101 ~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~--~feYG~~R~wGSig~ai~s~~~G~L~~i~--p~~~fwi~s~~ 176 (412)
T PF01306_consen 101 SNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRN--GFEYGRARMWGSIGFAIASLLAGILFNIN--PNIIFWIASAA 176 (412)
T ss_dssp TT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHH--SS-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHh--cCCcchHHHHhhHHHHHHHHHhheeeeeC--ccHHHHHHHHH
Confidence 2221 2223333333333334444444443333211 11122223444455444444444333221 36677775554
Q ss_pred HHHHHHHhhc-ccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHH
Q 011275 218 AAILCLAMVF-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTL 296 (489)
Q Consensus 218 ~~~~~~~~~~-~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (489)
+++..++.++ -|+.++. .+.+++ ...++++.+.....++++.++++...+....
T Consensus 177 ~~il~lll~~~~~~~~~~----~~~~~~---------------------~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g 231 (412)
T PF01306_consen 177 AIILLLLLLLLKPDVPPQ----AEVADA---------------------LGAKKDKVSLKDVLSLFKMRNFWFFVLFVIG 231 (412)
T ss_dssp HHHHHHHHHSS---SSSS----S-SSTT---------------------SSS------HHHHHHHTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcCchh----hhhhcc---------------------cccCCCCCcHHHHHHHhcchhHHHHHHHHHH
Confidence 4444443333 2332210 000000 0000001111224566777777665432221
Q ss_pred HHHHhhhhH-HHHHHhHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHh
Q 011275 297 FALQQLSGI-NAIFYFSSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (489)
Q Consensus 297 ~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~ 372 (489)
... .+..+ ...+.|....++..+.+ .|.....--+.+.+...+..++.+|+|.|+.++++...+.+=.......
T Consensus 232 ~~~-~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~- 309 (412)
T PF01306_consen 232 VAA-IYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA- 309 (412)
T ss_dssp HHH-HHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--
T ss_pred HHH-HHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh-
Confidence 111 00000 01111111111111111 2334444557788888899999999999998877655444333222211
Q ss_pred hccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCchh
Q 011275 373 SSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCM-SVHWVINFFVGLLFLRLLEQLGPQLL 451 (489)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~ 451 (489)
++ .+.....-++-+..+.+..-.. .-|+++.+|++..++...+.. ....++..+.+...+.++|+.|...+
T Consensus 310 ----~~---~~~i~~~klLH~~e~~l~lva~-fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~t 381 (412)
T PF01306_consen 310 ----TN---PWVISLIKLLHALEFPLLLVAA-FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHT 381 (412)
T ss_dssp -----S---HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----cc---hHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHH
Confidence 11 1111222233333332221112 238899999999999999874 44666777888888999999999889
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCC
Q 011275 452 YSIFGTFCLMAVAFVKRNVVETKGK 476 (489)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~pet~~~ 476 (489)
|.+++.+.+...++..+.+++.|..
T Consensus 382 ylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 382 YLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHHHHHHHHHHheeeecCCCcc
Confidence 9999998887777777777766654
No 114
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.56 E-value=1.7e-12 Score=126.41 Aligned_cols=325 Identities=19% Similarity=0.177 Sum_probs=193.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhc----chhhHH-HHHhHHHHHHHHHHHHhcch------HHHHHHHHHHHhhhc
Q 011275 87 TLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRA-FQLCALPMIIGASISATTRN------LIGMLLGRFVVGTGM 155 (489)
Q Consensus 87 ~~~~~~~~s~~~~g~~ig~~~~g~l~Dr----~GRr~~-~~~~~~~~~i~~~l~~~~~~------~~~l~~~R~l~G~g~ 155 (489)
....|.+....-+--++.-++.|.++|| +|||+. ++++.+.+++.+.++-.+++ ....++.-.+.+++.
T Consensus 47 ~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~Y 126 (467)
T COG2211 47 AALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGY 126 (467)
T ss_pred HHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHH
Confidence 3344555555555567899999999994 887555 55666888888888877764 334556678888888
Q ss_pred ccccccccchhcccCC-cccchhhhhHHHHHHHHHHHHHHHh-----hccccc--CCchhHHHHHHHHHHHHHHHHHhh-
Q 011275 156 GLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLI-----GIPVKE--IAGWWRICFWVSIVPAAILCLAMV- 226 (489)
Q Consensus 156 g~~~~~~~~~i~e~~p-~~~Rg~~~~~~~~~~~~G~~~~~~~-----~~~~~~--~~~~wr~~f~~~~~~~~~~~~~~~- 226 (489)
........++.+|+.+ ++||.+..++-..+..+|.++..+. ...-.+ ..+ |+..-++..+.+++..+..+
T Consensus 127 T~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g-~~~~~~~~~vi~~i~~l~~~~ 205 (467)
T COG2211 127 TLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALG-YQGTALVLGVIGVILLLFCFF 205 (467)
T ss_pred HheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhh-HHHHHHHHHHHHHHHHHHHHH
Confidence 8877777788899885 6889999999988888885443333 222222 123 45554443333333333322
Q ss_pred cccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhcc-CCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhH
Q 011275 227 FCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDR-GDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGI 305 (489)
Q Consensus 227 ~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (489)
-+.| |..+... .+. .+......+..++++|+++.......+.......-.
T Consensus 206 ~v~E---------R~~~~~~--------------------~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~ 256 (467)
T COG2211 206 NVKE---------RVVETQP--------------------TKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRG 256 (467)
T ss_pred Hhhc---------ccCcccc--------------------CcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHh
Confidence 2222 2111000 000 000011123456778887776653333332222212
Q ss_pred HHHHHhHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHH
Q 011275 306 NAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLS 385 (489)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (489)
....||..+.++...............+.+.+.++..++.+|+|+|++..++.++..++..++.+.+. +. ..+.
T Consensus 257 s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~----~~--~~l~ 330 (467)
T COG2211 257 SIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPA----GS--VVLI 330 (467)
T ss_pred hhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcC----cc--hHHH
Confidence 23345554444443333444555566677777899999999999999999887777777666554431 11 1122
Q ss_pred HHHHHHHHHHHhcCccccccccccccCC-------chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 011275 386 VGGMLMFVLTFALGAGPVPSLLLPEIFP-------SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP 448 (489)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 448 (489)
+...++...+ .....+++|.+.+|... .+.-|...+....+..++..+++++.+..+...|+
T Consensus 331 ~~~~~i~~~g-~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 331 VVALIIAGVG-TGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHH-hhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2222222222 22346788888888754 33446667778888888999999888887776654
No 115
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.50 E-value=9.9e-13 Score=128.31 Aligned_cols=152 Identities=22% Similarity=0.242 Sum_probs=121.0
Q ss_pred CCCCcchHHHHHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchh-hHH
Q 011275 42 TNPSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRA 120 (489)
Q Consensus 42 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GR-r~~ 120 (489)
.+++||. +.+..+.+++.+.+.+++.+......++++.+.+..-.|++.++..+|..++++.+|....|.|. |+.
T Consensus 29 ~~t~wrs----i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~P 104 (488)
T KOG2325|consen 29 RKTNWRS----IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP 104 (488)
T ss_pred cCCchHh----HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccC
Confidence 3455653 45666777888888888888776667776666666667999999999999999999999999995 666
Q ss_pred HHHhHHHHHHHHHHHH-h---cc-hHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHH
Q 011275 121 FQLCALPMIIGASISA-T---TR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLL 195 (489)
Q Consensus 121 ~~~~~~~~~i~~~l~~-~---~~-~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~ 195 (489)
++.+.++..+|+++.. + .+ .-+.++++|++.|+|.|... +...|+++-...++|-++.+....+..+|..+||.
T Consensus 105 li~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 6688888889988873 2 23 56788999999999977554 67789999999999999999888877777777777
Q ss_pred hhc
Q 011275 196 IGI 198 (489)
Q Consensus 196 ~~~ 198 (489)
++.
T Consensus 184 ~q~ 186 (488)
T KOG2325|consen 184 IQL 186 (488)
T ss_pred HHH
Confidence 654
No 116
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.47 E-value=5.5e-11 Score=112.53 Aligned_cols=350 Identities=15% Similarity=0.149 Sum_probs=191.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhH-HHHHHHHHHHHhcch--HHH-HHHHHHHHhhhccccccccc
Q 011275 88 LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA-LPMIIGASISATTRN--LIG-MLLGRFVVGTGMGLGPTVAA 163 (489)
Q Consensus 88 ~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~-~~~~i~~~l~~~~~~--~~~-l~~~R~l~G~g~g~~~~~~~ 163 (489)
..++...++..+-.++-+++.|.++|+.|+||...... .+..+...+..++++ ++. .++.-.+..++.........
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 34566666777777788999999999999877765443 334444444555544 443 44566777788778888888
Q ss_pred chhcccCCcccchhhhhHHHHHHHHHHHHHHHhh---cccc---------------cCCchhHHHHHHHHHHHHHHHH-H
Q 011275 164 LYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG---IPVK---------------EIAGWWRICFWVSIVPAAILCL-A 224 (489)
Q Consensus 164 ~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~---~~~~---------------~~~~~wr~~f~~~~~~~~~~~~-~ 224 (489)
+++.+..++++-++.++.-.....+|..+..+.. .... +... =|..+.+.++--++..+ .
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGED-VRITGLLAALWWLLFALPM 216 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcccccc-chhHHHHHHHHHHHHHhHH
Confidence 8999999998888877664433333432222221 0001 1111 35555543332222222 2
Q ss_pred hhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhh
Q 011275 225 MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSG 304 (489)
Q Consensus 225 ~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (489)
++.+++.++ .+..+. + ...+...++. .++++..+.+.....+++.+++.- +
T Consensus 217 ~~~v~~~~~-----~~~~~~-~---------~l~~g~k~L~----------~t~k~i~~~~~i~~FLiA~~~~~D----G 267 (438)
T COG2270 217 ILNVHDAEK-----ISSPPP-T---------ALRNGFKELK----------STFKEIRGRKNLVLFLIARFFYID----G 267 (438)
T ss_pred Hhccccccc-----ccccch-H---------HHHHHHHHHH----------HHHHHHhcccchHHHHHHHHHHHh----h
Confidence 223333321 000000 0 0011111111 123333333433333333333221 2
Q ss_pred HHHHHH----hHHHHHHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCch
Q 011275 305 INAIFY----FSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 380 (489)
Q Consensus 305 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (489)
.+.+.. |....++....+..+..+...+..++|+++.|++.||+|.|+++..+.+...+.++...... ...
T Consensus 268 v~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~-----~~~ 342 (438)
T COG2270 268 VNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE-----GEL 342 (438)
T ss_pred HHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc-----ccH
Confidence 222222 22222222222334455667788899999999999999999988777665544443332211 111
Q ss_pred hhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHHH
Q 011275 381 SLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGP-QLLYSIFGTFC 459 (489)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~ 459 (489)
..+. .+++ ...+..+.......|.+++.|++.-++..|+.+..++..++.+|+.+....+..+. ...+....++.
T Consensus 343 ~f~i--~gll--~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll 418 (438)
T COG2270 343 DFWI--LGLL--VGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLL 418 (438)
T ss_pred HHHH--HHHH--HHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHH
Confidence 1111 1111 11122223345677999999999999999999999999999999998887776554 33444444455
Q ss_pred HHHHHHHHhhcccCCCCC
Q 011275 460 LMAVAFVKRNVVETKGKS 477 (489)
Q Consensus 460 ~~~~~~~~~~~pet~~~~ 477 (489)
+++.+. +..+|+.++++
T Consensus 419 ~iGl~~-L~~v~~~~~~~ 435 (438)
T COG2270 419 LIGLLL-LLRVKVPGRRE 435 (438)
T ss_pred HhhHhh-EEeecCCCCcc
Confidence 555443 34566654443
No 117
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.46 E-value=1.8e-13 Score=114.17 Aligned_cols=135 Identities=21% Similarity=0.362 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCccc
Q 011275 95 SMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV 174 (489)
Q Consensus 95 s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~ 174 (489)
+.+.++..+++++.|++.||+|||+.+..+..+..++.++....++++.+.+.+++.|++.+...+....++.|.+|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 34566788899999999999999999999999999999988889999999999999999999988889899999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHH-hhcccC
Q 011275 175 RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA-MVFCAE 230 (489)
Q Consensus 175 Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~pE 230 (489)
|++..++......+|..+++.++..+.+..+ |++.+++.....++..+. .+..||
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999888888877766656 688887755444444333 334454
No 118
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.39 E-value=9.8e-12 Score=122.34 Aligned_cols=225 Identities=14% Similarity=0.112 Sum_probs=136.9
Q ss_pred CcccchhhhhhccccccCCCCCccchhhhhccc-cCCcc--c-----CCCCCCcchHHHHHHHHHHHHhhhhccceeecc
Q 011275 1 MWGRQREASMMYKRTSSRDRSSTFDVEETTALV-QNGTE--V-----ENTNPSWKLSFPHVLVATLSSFLFGYHLGVVNE 72 (489)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 72 (489)
++||++||++.+++-+..++.+....+..+... .+.++ . ..++++.|+.....+.+.++..++|.+ .+..
T Consensus 214 ~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~--ai~~ 291 (485)
T KOG0569|consen 214 KKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGIN--AIFF 291 (485)
T ss_pred HcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcc--eeHH
Confidence 379999999999988876654432221111111 11111 0 012333333222233333333444433 3444
Q ss_pred chhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcc---hHH------H
Q 011275 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR---NLI------G 143 (489)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~---~~~------~ 143 (489)
.-.++.++.|++.++.+ +.......-..+.++++..+.||+||||.++.+..+..+..++..... +.. .
T Consensus 292 Yst~i~~~aG~~~~~a~--~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~ 369 (485)
T KOG0569|consen 292 YSTSIFKTAGFTPEEAQ--YANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYL 369 (485)
T ss_pred HHHHHHHHcCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 55678888888766543 445555556678999999999999999999999999888877765431 111 1
Q ss_pred HHHHHHHHhhhccc-ccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHH-
Q 011275 144 MLLGRFVVGTGMGL-GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL- 221 (489)
Q Consensus 144 l~~~R~l~G~g~g~-~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~- 221 (489)
.+++.++..++.+. .-|+..-+.+|++|++.|..+.++......+..++-...-.++.+..|. ..|++..++..+.
T Consensus 370 ~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~ 447 (485)
T KOG0569|consen 370 CIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFL 447 (485)
T ss_pred HHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHH
Confidence 23444444444332 2456677899999999999999998888888766555554455444442 4555544555444
Q ss_pred HHHhhcccCC
Q 011275 222 CLAMVFCAES 231 (489)
Q Consensus 222 ~~~~~~~pEs 231 (489)
+..+..+|||
T Consensus 448 i~~~~~lPET 457 (485)
T KOG0569|consen 448 IYLYRYLPET 457 (485)
T ss_pred HHHHHhCccc
Confidence 4456779999
No 119
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.39 E-value=1.7e-10 Score=111.75 Aligned_cols=136 Identities=23% Similarity=0.309 Sum_probs=108.2
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhc-chhhHHHHHhHHHHHHHHHHHHhcc--hHHHHHHHHHHHhhhccc
Q 011275 81 LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGMGL 157 (489)
Q Consensus 81 ~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr-~GRr~~~~~~~~~~~i~~~l~~~~~--~~~~l~~~R~l~G~g~g~ 157 (489)
+|+++++. .-+.+.|.-=.=+...+.|+++|| .|+|+++..+.+++.+|.++.+.+. +...+.++-.+.++|.|.
T Consensus 56 Lg~~~~~A--~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl 133 (498)
T COG3104 56 LGFDETHA--TGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGL 133 (498)
T ss_pred CCcChHhh--HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccc
Confidence 34654432 233333322223567889999998 7999999999999999999999884 788899999999999999
Q ss_pred ccccccchhcccCCccc--chhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHH
Q 011275 158 GPTVAALYVTEVSPPFV--RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (489)
Q Consensus 158 ~~~~~~~~i~e~~p~~~--Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~ 219 (489)
.=+....++.|.+|+++ |....+++.++.++|.+.+|++...+.+..+ |+..|.++.+-..
T Consensus 134 ~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g-~~~gF~~aavGm~ 196 (498)
T COG3104 134 FKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYG-WHVGFGLAAVGMI 196 (498)
T ss_pred ccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHH
Confidence 99999999999998644 6677888889999999999999888887777 6888887644333
No 120
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.37 E-value=2.5e-12 Score=134.57 Aligned_cols=139 Identities=14% Similarity=0.021 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCC
Q 011275 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (489)
Q Consensus 92 ~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p 171 (489)
+...+..++.++|.++.|+++||+|||+++..+.++.+++.++.+++++...+++.+++.|++.++..+....+++|++|
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~P 678 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYP 678 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44555668889999999999999999999999999999999999999888888899999999888888888899999999
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcccCCh
Q 011275 172 PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESP 232 (489)
Q Consensus 172 ~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~pEsp 232 (489)
.++|++++++......+|.+++|++++.+.+.. ...+|++.++..++..++..++|||.
T Consensus 679 t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~--~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 679 SDKRATAFGFLNALCKAAAVLGILIFGSFVGIT--KAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999999999999999999998876554322 35677766555565556666779983
No 121
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.27 E-value=5.5e-11 Score=117.81 Aligned_cols=154 Identities=14% Similarity=0.185 Sum_probs=115.8
Q ss_pred chhhh-hhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHH
Q 011275 73 PLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVV 151 (489)
Q Consensus 73 ~~~~i-~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~ 151 (489)
..|.+ .++++.+. .+.++..+...++..++.++.|+++||+|||+.+..+.....+........++.+.+++.|++.
T Consensus 238 ~~p~~l~~~~~~~~--~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 315 (393)
T PRK15011 238 NMPLFIINELHLPE--KLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLN 315 (393)
T ss_pred HHHHHHHHHcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45544 35566654 3456666666667788999999999999999988777666555544555667888888899999
Q ss_pred hhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcccC
Q 011275 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAE 230 (489)
Q Consensus 152 G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~pE 230 (489)
+++.|...+....+..|.+|+ +||+++++++....+|..+++.+++.+.+..+ |+..|++..+..++.++..++.||
T Consensus 316 ~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 316 AIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhcC
Confidence 888777766677788999885 59999999988889999989888887776655 798988776666665555555544
No 122
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.27 E-value=2.1e-11 Score=119.77 Aligned_cols=143 Identities=17% Similarity=0.073 Sum_probs=115.6
Q ss_pred hhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHH--HHHHHHHHH
Q 011275 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLI--GMLLGRFVV 151 (489)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~--~l~~~R~l~ 151 (489)
.+.+.++++.+. .+.++..+.+.++..++.++.|+++||+|||+.+..+.++..++..+....++.. .++...++.
T Consensus 228 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (377)
T TIGR00890 228 YKPYGQSLGLSD--GFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALV 305 (377)
T ss_pred HHHHHHHcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHH
Confidence 444566777653 3457788888899999999999999999999999999888888888777766432 344668889
Q ss_pred hhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHH
Q 011275 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (489)
Q Consensus 152 G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~ 219 (489)
|++.|...+..+.++.|.+|+++|++..++++....+|..+++.+.+.+.+..+ |++.|++.++..+
T Consensus 306 g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~ 372 (377)
T TIGR00890 306 FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFAL 372 (377)
T ss_pred HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHH
Confidence 998888888888899999999999999999999999999999888877766666 6888877544333
No 123
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.27 E-value=6.7e-11 Score=114.90 Aligned_cols=154 Identities=23% Similarity=0.340 Sum_probs=130.4
Q ss_pred eeccchhhhhhhc-CCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhH-HHHHhHHHHHHHHHHHHhcchHHHHHH
Q 011275 69 VVNEPLESISLDL-GFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR-AFQLCALPMIIGASISATTRNLIGMLL 146 (489)
Q Consensus 69 ~~~~~~~~i~~~~-~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~-~~~~~~~~~~i~~~l~~~~~~~~~l~~ 146 (489)
......|.+.++. |.+ +.+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.++....++.+.+.+
T Consensus 193 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 270 (352)
T cd06174 193 GLLTYLPLYLQEVLGLS--AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLV 270 (352)
T ss_pred HHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 3444566666664 544 445678888999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHh
Q 011275 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (489)
Q Consensus 147 ~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 225 (489)
..++.|++.+...+....++.|..|+++|++..++.+....+|..+++.+.+.+.+..+ |++.+++..+..++..+..
T Consensus 271 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 271 ALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999989888877766555 6888887666655554443
No 124
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.27 E-value=4.8e-11 Score=118.55 Aligned_cols=151 Identities=16% Similarity=0.088 Sum_probs=117.5
Q ss_pred chhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHh
Q 011275 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVG 152 (489)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G 152 (489)
.++.+..+.+.+ +.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.++....++.+.+++.+++.|
T Consensus 238 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 313 (399)
T PRK05122 238 FITLYYAARGWD----GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTG 313 (399)
T ss_pred HHHHHHHHcccc----cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 344444555542 2245566778888899999999999999999999988888888888888888888888999999
Q ss_pred hhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcc
Q 011275 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (489)
Q Consensus 153 ~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 228 (489)
++.+...+.....+.|..|+++||+..++++....+|..+++.+.+.+.+..+ |++.|++.....++..+...+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 314 FGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHh
Confidence 99988887777778899999999999999999999997766666666655556 6888887655555544444333
No 125
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.26 E-value=2.4e-11 Score=121.14 Aligned_cols=143 Identities=14% Similarity=0.154 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcc----hHHHHHHHHHHHhhhcccccccccc
Q 011275 89 AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR----NLIGMLLGRFVVGTGMGLGPTVAAL 164 (489)
Q Consensus 89 ~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~----~~~~l~~~R~l~G~g~g~~~~~~~~ 164 (489)
..+...+...++..++.++.|+++||+|||+++..+.++.+++..+..... ++..+++.+++.|++.+...+....
T Consensus 252 ~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~ 331 (418)
T TIGR00889 252 NASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSV 331 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347778888888889999999999999999999999999888876666532 2456677899999999888888888
Q ss_pred hhcccCCcccchhhhhHHH-HHHHHHHHHHHHhhcccccCCc-----hhHHHHHHHHHHHHHH-HHHhhcccCC
Q 011275 165 YVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAG-----WWRICFWVSIVPAAIL-CLAMVFCAES 231 (489)
Q Consensus 165 ~i~e~~p~~~Rg~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~-----~wr~~f~~~~~~~~~~-~~~~~~~pEs 231 (489)
+++|++|+++||+..++++ ....+|..+|+++++.+.+..+ .|+..|++.++..++. .+..++++|+
T Consensus 332 ~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 332 FVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999997 6788899889988887665432 2798887754444433 3444556666
No 126
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.25 E-value=1.9e-09 Score=106.84 Aligned_cols=311 Identities=17% Similarity=0.195 Sum_probs=176.4
Q ss_pred HHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcc--cccccccchhcccCCcccc
Q 011275 98 LGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG--LGPTVAALYVTEVSPPFVR 175 (489)
Q Consensus 98 ~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g--~~~~~~~~~i~e~~p~~~R 175 (489)
.+...+.++..|.++||+|||..+.+......+......+.. ++ +++ +.|+..+ .......+|++|....++|
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~-~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R 146 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YW-FFL---LLGLSGGFSAIFSVGFAYVADISSEEER 146 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HH-Hhh---hcccccchhhhhhhhhhheeeccchhHH
Confidence 456678899999999999999999999888877777666655 33 333 5555443 4556777899999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHH-HHHhhcccCChHHHHhcCCHHHHHHHHHHHhCC
Q 011275 176 GTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL-CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGG 254 (489)
Q Consensus 176 g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~ 254 (489)
....++.......+..++|.++..+....+. -.+|.++....++. .....++||+-+ .+.+++ ...++....
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~-a~~f~ia~~~~~~~~~y~~~~l~Esl~---~~~~~~---~~~~~~~~~ 219 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGI-ALVFLIAAASGILSLLYMLLFLPESLQ---EKERSD---ATLRELTPG 219 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHhhccccccC---cccccc---ccccccCCC
Confidence 9999999998888988888888766554443 55666654444443 344567898832 111111 000000000
Q ss_pred CchhHHHHHHHhhccCCCCcchhHHHhhhccchhHH---HHHHHHHHHHhhhhHH-HHHHhHHHHHHhcCCCcchHHHHH
Q 011275 255 SHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV---FIGSTLFALQQLSGIN-AIFYFSSSVFKSAGLSSGLANVFV 330 (489)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 330 (489)
....... ...+....+.++.+.. ....+........+.. ..++|....++......+......
T Consensus 220 ~~~~~~~-------------~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~ 286 (463)
T KOG2816|consen 220 SLDSSHV-------------ADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLV 286 (463)
T ss_pred cccchhh-------------hhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHH
Confidence 0000000 0001111111111111 1111111111111101 112222222221111122233444
Q ss_pred HHHHHHHHHHHH-HHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCcccccccccc
Q 011275 331 GIANLLGSVVAM-VLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLP 409 (489)
Q Consensus 331 ~i~~~~g~~~~g-~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (489)
.+...++.++.. .+...+|-|+.+..|.....+......+... .+..+... ....++....|......+
T Consensus 287 ~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~-----~w~~~~~~-----v~~~~~~~~~pa~~s~~s 356 (463)
T KOG2816|consen 287 SILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATE-----TWMMFAAG-----VVVALAGIVFPAIRAFAS 356 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhcc-----chhhhHHH-----HHHHhhcchhHHHHhHHH
Confidence 455556665555 6778889888777776666665555544321 12222211 112233344566667788
Q ss_pred ccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 410 EIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL 443 (489)
Q Consensus 410 e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (489)
-+.+++.+|+.+++...+..+.+.+.|..++.++
T Consensus 357 ~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 357 ILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred hhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 8889999999999999999999999998877664
No 127
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.24 E-value=1e-10 Score=116.50 Aligned_cols=152 Identities=24% Similarity=0.200 Sum_probs=121.2
Q ss_pred chhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHh
Q 011275 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVG 152 (489)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G 152 (489)
..|.+.++.|.+.+ +.+...+.+.++..++.++.|+++||+|||+.+..+.+...++..+....++.+.+.+.-++.|
T Consensus 242 ~~p~~~~~~g~s~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (406)
T PRK11551 242 WLPSLLVGQGLSRS--QAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAG 319 (406)
T ss_pred HHHHHHHhCCCChh--hhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 45777778777644 4577888888899999999999999999999998877776676666677778877778888889
Q ss_pred hhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhh
Q 011275 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (489)
Q Consensus 153 ~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 226 (489)
++.++..+....++.|.+|+++||+..++++....+|..+++.+++.+.+..++|...++......++..+..+
T Consensus 320 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 320 LFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 88877777888899999999999999999999999999999998888776655577777665444444434333
No 128
>PRK12382 putative transporter; Provisional
Probab=99.22 E-value=8.4e-11 Score=116.53 Aligned_cols=147 Identities=17% Similarity=0.138 Sum_probs=118.8
Q ss_pred chhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHh
Q 011275 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVG 152 (489)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G 152 (489)
..|.+.++.+.+. .++..+.+.++..+++++.|++.||+|||+.+..+..+..++.++....++...+.+.+++.|
T Consensus 238 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 313 (392)
T PRK12382 238 FVSLYFASKGWAM----AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHhcCCch----hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 3444555555432 345566677788899999999999999999999998888888888888888888888999999
Q ss_pred hhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHH
Q 011275 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (489)
Q Consensus 153 ~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 224 (489)
++.+...+.....+.|.+|+++||+..++++....+|..+++.+.+.+.+..+ |+..|++.....++..+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~ 384 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIV 384 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHH
Confidence 99988888777888999999999999999999999998888888877777666 698888765555444433
No 129
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.22 E-value=2.2e-10 Score=117.27 Aligned_cols=161 Identities=11% Similarity=0.003 Sum_probs=98.9
Q ss_pred cchhhhhhhcCCCCchhH---------HHH-HHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcc--
Q 011275 72 EPLESISLDLGFNGNTLA---------EGL-VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR-- 139 (489)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~---------~~~-~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~-- 139 (489)
...|.+.++.|++.++.. ... ......++..+|.++.++++||+|||+++..+..+.+++..+.+...
T Consensus 309 ~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~ 388 (502)
T TIGR00887 309 LNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH 388 (502)
T ss_pred cccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 346777778887643210 001 22334456667889999999999999999888877776665554432
Q ss_pred --hHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCC---------chhH
Q 011275 140 --NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA---------GWWR 208 (489)
Q Consensus 140 --~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~---------~~wr 208 (489)
+...+...=+...++..+..+....+.+|.+|.+.|++..++.+....+|.++++.+...+.+.. -++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 468 (502)
T TIGR00887 389 LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMG 468 (502)
T ss_pred cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccch
Confidence 11111111111222222334456677899999999999999999999898888877665544421 1124
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCh
Q 011275 209 ICFWVSIVPAAILCLAMVFCAESP 232 (489)
Q Consensus 209 ~~f~~~~~~~~~~~~~~~~~pEsp 232 (489)
..|++.+...++..+..+++|||.
T Consensus 469 ~~~~i~~~~~~~~~i~~~~lpEt~ 492 (502)
T TIGR00887 469 HVLEIFALFMFLGILFTLLIPETK 492 (502)
T ss_pred HHHHHHHHHHHHHHHHheEeccCC
Confidence 455554444444444456779983
No 130
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.20 E-value=3.2e-10 Score=115.50 Aligned_cols=158 Identities=17% Similarity=0.051 Sum_probs=104.4
Q ss_pred ccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcc--hHH--HHHH
Q 011275 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLI--GMLL 146 (489)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~--~~~--~l~~ 146 (489)
....|.+.++.|.+.+.. .+......++..++.++.++++||+|||+++..+.++.+++.++.+... +.. ....
T Consensus 291 ~~~~p~i~~~~g~~~~~~--~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 368 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIA--LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALL 368 (479)
T ss_pred HHHHHHHHHHcCCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHH
Confidence 344577878888765432 3455556667789999999999999999999999998888877765431 211 2222
Q ss_pred HHHHHhhhccc-ccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhc------ccccCCchhHHHHHHHHHHHH
Q 011275 147 GRFVVGTGMGL-GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI------PVKEIAGWWRICFWVSIVPAA 219 (489)
Q Consensus 147 ~R~l~G~g~g~-~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~------~~~~~~~~wr~~f~~~~~~~~ 219 (489)
.-++.+.+.+. ..+....+++|.+|+++|+.++++......+|..+++.+.. .+.+..+ |++.|++.++..+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~ 447 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHHHH
Confidence 33444444433 23566788999999999999999998888887766543332 2223344 5677766544444
Q ss_pred HHHH-HhhcccCC
Q 011275 220 ILCL-AMVFCAES 231 (489)
Q Consensus 220 ~~~~-~~~~~pEs 231 (489)
+..+ ..++.||+
T Consensus 448 ~~~~~~~~~~~e~ 460 (479)
T PRK10077 448 LAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHhccccC
Confidence 4333 34456777
No 131
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.17 E-value=3.1e-10 Score=114.57 Aligned_cols=149 Identities=11% Similarity=0.071 Sum_probs=115.6
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhc--chhhHHHHH--hHHHHHHHHHHHHhcchHHHHH
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG--VGRRRAFQL--CALPMIIGASISATTRNLIGML 145 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr--~GRr~~~~~--~~~~~~i~~~l~~~~~~~~~l~ 145 (489)
....+|.+.++.|.+. .+.++..+...++..+++++.|+++|| +++|+...+ +.++.+++.++...+++++.++
T Consensus 260 ~~~~l~~~~~~~g~s~--~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~ 337 (455)
T TIGR00892 260 PIIFLVPYAKDKGVDE--YEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLV 337 (455)
T ss_pred hHHHHHHHHHHcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 3445666777777653 456788888888889999999999997 344443333 3344445555667788999999
Q ss_pred HHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHH
Q 011275 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (489)
Q Consensus 146 ~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~ 220 (489)
+.+++.|++.+...+....++.|.+|+++||+..++++....+|..+|+.+++.+.+..+.|++.|++..+..++
T Consensus 338 i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li 412 (455)
T TIGR00892 338 IYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVS 412 (455)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHH
Confidence 999999999998888888899999999999999999999999999999999888776654478888876554443
No 132
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.17 E-value=1e-10 Score=117.06 Aligned_cols=132 Identities=12% Similarity=0.012 Sum_probs=110.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhc
Q 011275 88 LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVT 167 (489)
Q Consensus 88 ~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~ 167 (489)
.+.|++.+...++..++.++.|+++||+|||+.+..+.++.+++..+.+++++.+.+.+.+++.|++.+...+....++.
T Consensus 262 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 341 (420)
T PRK09528 262 RVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYIT 341 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578888888888999999999999999999999999999998888889999999999999999988877777778899
Q ss_pred ccCCcccchhhhhH-HHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHH
Q 011275 168 EVSPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (489)
Q Consensus 168 e~~p~~~Rg~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~ 220 (489)
|.+|++.|+...+. ++....+|..+++.+++.+.+..| ||..|...++..++
T Consensus 342 ~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i 394 (420)
T PRK09528 342 LNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLL 394 (420)
T ss_pred HHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHH
Confidence 99999999877655 567778888888888888777667 69888875444443
No 133
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.16 E-value=4.6e-12 Score=128.57 Aligned_cols=143 Identities=20% Similarity=0.240 Sum_probs=3.0
Q ss_pred HHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHH
Q 011275 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (489)
Q Consensus 55 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l 134 (489)
.+++..+......+.++..++++.++|+++.+ +.|++.+.+-++..+..++..++.+|..|-+.+-.+.+++++|+++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~--~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSS--QSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHH
Confidence 34444455556667788889999999998755 5689999999999999999999999988888888899999999887
Q ss_pred HHhc----c----------------------------------------------hHHHHHHHHHHHhhhcccccccccc
Q 011275 135 SATT----R----------------------------------------------NLIGMLLGRFVVGTGMGLGPTVAAL 164 (489)
Q Consensus 135 ~~~~----~----------------------------------------------~~~~l~~~R~l~G~g~g~~~~~~~~ 164 (489)
.++- . -+..++++.++.|+|....++++.+
T Consensus 85 ~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 85 FALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred HhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 6530 0 0234678999999999999999999
Q ss_pred hhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcc
Q 011275 165 YVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (489)
Q Consensus 165 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~ 199 (489)
|+=|..+++.-+.+.+++.....+|+.+|.++|..
T Consensus 165 YiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~ 199 (539)
T PF03137_consen 165 YIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSF 199 (539)
T ss_dssp -----------------------------------
T ss_pred eeccccccccCccchhhhhHHhhccHHHHHHHHHH
Confidence 99999999999999999999999999988888753
No 134
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.16 E-value=1e-07 Score=90.90 Aligned_cols=327 Identities=17% Similarity=0.122 Sum_probs=177.3
Q ss_pred hhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcch-----hhHHHHH-hHHHHHHHHHHHHh-----cc-------
Q 011275 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-----RRRAFQL-CALPMIIGASISAT-----TR------- 139 (489)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~G-----Rr~~~~~-~~~~~~i~~~l~~~-----~~------- 139 (489)
..|+++. ....+...++..+- ....+.+|+.+|+.+ ||..+++ +.+++..+..+..+ +.
T Consensus 7 IvEL~vp--A~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 7 IVELGVP--AWLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred HHHhccH--HHHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 4466654 22334444544333 356889999999999 7766654 45555554444432 22
Q ss_pred hH--H--HHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHH
Q 011275 140 NL--I--GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (489)
Q Consensus 140 ~~--~--~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~ 215 (489)
+. + .....-.+.|+|.+...+...++++|..|+++|+++.++......+|.+++.+..+.+.+..+--|..-.+..
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 12 2 2234667888888888888889999999999999999999999999988877765544333332344433332
Q ss_pred HH--HHHHHHHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCchhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHH
Q 011275 216 VP--AAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (489)
Q Consensus 216 ~~--~~~~~~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (489)
.. .+++.++..+-.|.+. .+.. ...++++..-...+.++..+++.++.+..
T Consensus 164 ~a~i~~~l~~ia~wg~E~r~-------~~~~--------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~f 216 (403)
T PF03209_consen 164 VALIALLLNLIALWGQEPRR-------SRRA--------------------AAAERPRPPFREAWRQVWASPQARRFFVF 216 (403)
T ss_pred HHHHHHHHHHHHHHhcccCC-------cccc--------------------cCCCCCCccHHHHHHHHHhCCChhHHHHH
Confidence 22 2222222333334311 0000 00011111112335555556665555433
Q ss_pred HHHHHHHhhhhHHHHHHhHHHHHHhcCCCcc---hHHHHHHHHHHHHHHHHHHHHh-hcCCchhHHHhhHHHHHHHHHHH
Q 011275 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMD-KLGRKALLQWSFFSMAVSMAIQV 369 (489)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~d-r~grr~~~~~~~~~~~~~~~~~~ 369 (489)
.++.....+ .... ...|+-=+..+++.+ ..+...+.+.++|..+.+++.. |.++++...++.....++..++.
T Consensus 217 l~l~t~a~~-~QD~--iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii 293 (403)
T PF03209_consen 217 LFLGTLAFF-MQDV--ILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALII 293 (403)
T ss_pred HHHHHHHHH-hhHH--HcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 222211100 0000 111111123445444 3455667888888888888766 67777777777777777666555
Q ss_pred HHhhccCCCchhhHHHHHHHHHHHHHHhcCcccc-ccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 370 AASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV-PSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE 444 (489)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (489)
...... + . +..-..+..+++ +.|...+ .-..+-++.+++..|+.+|.=...+.+...++.+..+...|
T Consensus 294 ~a~~~~--~-~--~~~~~~~~l~G~--g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 294 LAGPLG--S-P--WLFRPGVFLLGL--GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred HHHhcc--c-c--hHHHHHHHHHHH--hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443221 1 1 111122222222 2222111 11245577778889999988777777766666665555444
No 135
>PRK10054 putative transporter; Provisional
Probab=99.14 E-value=1.5e-09 Score=107.51 Aligned_cols=148 Identities=14% Similarity=0.074 Sum_probs=97.6
Q ss_pred HhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHH
Q 011275 317 KSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFV 393 (489)
Q Consensus 317 ~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (489)
+..|.+. ++......++..++.+..|+++||+|||+++..+.....++........+ . +..+.......
T Consensus 36 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~g 107 (395)
T PRK10054 36 RQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNN------V--TLVVLFFALIN 107 (395)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhH------H--HHHHHHHHHHH
Confidence 4455543 45555666788888999999999999999887776666555444332211 1 11111111111
Q ss_pred HHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccC
Q 011275 394 LTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVET 473 (489)
Q Consensus 394 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 473 (489)
.... ...|....+.+|.+|++.|+++.++.....+++..++|.+...+. ..++...|.+.++++++..+.....+||+
T Consensus 108 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~-~~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 108 CAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV-MQSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1111 224555667899999999999999999999999999988877655 46788888877777666655554445554
Q ss_pred C
Q 011275 474 K 474 (489)
Q Consensus 474 ~ 474 (489)
+
T Consensus 186 ~ 186 (395)
T PRK10054 186 E 186 (395)
T ss_pred c
Confidence 3
No 136
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.13 E-value=3.3e-10 Score=112.83 Aligned_cols=134 Identities=15% Similarity=0.168 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhccc
Q 011275 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (489)
Q Consensus 90 ~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~ 169 (489)
.+.+.+...++..++.+..|+++||+|||+.+..+..+..++.+.....++.+.+.+.+++.|++.+...+....++.|.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 35556666778888999999999999999999998888888777777778888888999999999999888888888899
Q ss_pred CCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHH
Q 011275 170 SPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (489)
Q Consensus 170 ~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 224 (489)
.|+++||+..+++.....+|..+|+.+++.+.+..+ |++.|++..+..++..+.
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~ 393 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVY 393 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888776666 689998765555554443
No 137
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.11 E-value=1e-08 Score=102.22 Aligned_cols=153 Identities=19% Similarity=0.196 Sum_probs=102.9
Q ss_pred hhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcc-----hhhHHHHHhHHHHHHHHHHHHhc----chHHHH
Q 011275 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRAFQLCALPMIIGASISATT----RNLIGM 144 (489)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~-----GRr~~~~~~~~~~~i~~~l~~~~----~~~~~l 144 (489)
.+.+.+++|.++++.+ ...+...+.. ..-++.|.++|-+ -||+-++++.++..++....+.. .+....
T Consensus 13 ~~~l~~~l~ls~~~~~--~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQ--RLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHHHHHcCCCHHHHH--HHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 4567778898866543 3444444443 3468899999975 36666666776665555544442 346666
Q ss_pred HHHHHHHhhhcccccccccchhcccCC--cccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHH
Q 011275 145 LLGRFVVGTGMGLGPTVAALYVTEVSP--PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (489)
Q Consensus 145 ~~~R~l~G~g~g~~~~~~~~~i~e~~p--~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~ 222 (489)
.+.=++..+|....-.++-+.+.|... ++.||...++......+|.+++..+++++.+..+ .|+.|.+..+...+..
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHHHHHH
Confidence 666788888888888888899999884 3447888888888888998888888877766555 5777776544444433
Q ss_pred -HHhhcccC
Q 011275 223 -LAMVFCAE 230 (489)
Q Consensus 223 -~~~~~~pE 230 (489)
...+..+|
T Consensus 169 ~~~~~~~~e 177 (433)
T PF03092_consen 169 IVALFLLEE 177 (433)
T ss_pred HHHHHhhhh
Confidence 33344444
No 138
>TIGR00898 2A0119 cation transport protein.
Probab=99.10 E-value=4.1e-10 Score=115.53 Aligned_cols=133 Identities=14% Similarity=0.016 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchH--HHHHHHHHHHhhhcccccccccchhcccCCcc
Q 011275 96 MCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNL--IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF 173 (489)
Q Consensus 96 ~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~--~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~ 173 (489)
...+...++.++.+++.||+|||+.+..+.++.+++.++..+.++. ....+.-++.+++.+...+....+..|.+|++
T Consensus 363 ~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 442 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTV 442 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHH
Confidence 3445667888999999999999999999998888888777766544 44555566777777777778888999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcccCC
Q 011275 174 VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (489)
Q Consensus 174 ~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~pEs 231 (489)
.|+...++.+....+|.+++|.+.. +.+ .+ +...+++.+...++..+..+++||+
T Consensus 443 ~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~lpet 497 (505)
T TIGR00898 443 VRNLGVGVCSTMARVGSIISPFLVY-LGE-KW-LFLPLVLFGGLALLAGILTLFLPET 497 (505)
T ss_pred HHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HH-HhhHHHHHHHHHHHHHHHHHcCcCC
Confidence 9999999999999999888888766 322 22 4556665555555555566778987
No 139
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.10 E-value=2.9e-10 Score=112.34 Aligned_cols=143 Identities=20% Similarity=0.179 Sum_probs=105.7
Q ss_pred eccchhhhh-hhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHH--HHHHh--cchHHHH
Q 011275 70 VNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA--SISAT--TRNLIGM 144 (489)
Q Consensus 70 ~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~--~l~~~--~~~~~~l 144 (489)
.....|.+. ++++.+.+ +.+.......++..++.++.|+++||+|||+.+.....+..+.. .+... .++.+.+
T Consensus 238 ~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
T TIGR00883 238 ITTYLPTYLTQTLGLSAN--SALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLF 315 (394)
T ss_pred HHHHHHHHHHHhcCCChh--HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 344556665 55666543 45677778888899999999999999999998876555444333 22222 2466667
Q ss_pred HHHHHHHhhhcccccccccchhcccCCcccchhhhhH-HHHHHHHHHHHHHHhhcccccCCchhHHHHHHH
Q 011275 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (489)
Q Consensus 145 ~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~ 214 (489)
....++.|++.+...+....++.|.+|+++|+++.++ ++.+..+|..++|.+++.+.+..+.|++.++..
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~ 386 (394)
T TIGR00883 316 FFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYL 386 (394)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHH
Confidence 7788999999888888889999999999999999887 456677788788888877776666467766554
No 140
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.08 E-value=1e-09 Score=107.92 Aligned_cols=147 Identities=18% Similarity=0.284 Sum_probs=111.7
Q ss_pred hhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhccc
Q 011275 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGL 157 (489)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~ 157 (489)
.+++|.+.+ +.++..+.......++.++.|++.||+|||+++..+.++..++..+....++.+.+.+.+++.|++.|.
T Consensus 227 ~~~~g~~~~--~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 227 IHELGLPDK--LAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHcCCCHH--HHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456676543 456666666566677889999999999999999887776666655556667888888899999999888
Q ss_pred ccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcc
Q 011275 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (489)
Q Consensus 158 ~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 228 (489)
..+....++.|..|+ +|++..++++....+|..+++.+++.+.+..+ |+..|++..+..++..+...++
T Consensus 305 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHhee
Confidence 888788888999876 56799999998888998888888777666656 6888887666555555544443
No 141
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.08 E-value=8.4e-09 Score=102.17 Aligned_cols=155 Identities=15% Similarity=0.160 Sum_probs=107.1
Q ss_pred HHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHH
Q 011275 312 SSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 388 (489)
Q Consensus 312 ~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (489)
.+.+.++.+.+. +.......++..++.++.|++.||+|||+++..+.+..+++..+..... + ... +. ..
T Consensus 43 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~-----~-~~~-l~-~~ 114 (394)
T PRK10213 43 LTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN-----S-FSL-LL-IG 114 (394)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC-----h-HHH-HH-HH
Confidence 344555566554 3444566778888999999999999999998888777766555433221 1 111 11 11
Q ss_pred HHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Q 011275 389 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 468 (489)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 468 (489)
-.+.+...+. ..|....+++|.+|++.|+++.++......++..++|.+.+.+.+..+|.+.|.+.++++++..++...
T Consensus 115 r~l~G~~~g~-~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~ 193 (394)
T PRK10213 115 RACLGLALGG-FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIK 193 (394)
T ss_pred HHHHHHhhHH-HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 1122222211 234556678999999999999999999999999999988888888889988888888777766666656
Q ss_pred hcccCCC
Q 011275 469 NVVETKG 475 (489)
Q Consensus 469 ~~pet~~ 475 (489)
.+||+++
T Consensus 194 ~~p~~~~ 200 (394)
T PRK10213 194 SLPSLPG 200 (394)
T ss_pred HCCCCCc
Confidence 6788654
No 142
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.06 E-value=1.5e-09 Score=107.24 Aligned_cols=152 Identities=18% Similarity=0.164 Sum_probs=100.9
Q ss_pred ceeeccchhhhhh-hcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhH--HHH------HhHHHHHHHHHHHHh
Q 011275 67 LGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR--AFQ------LCALPMIIGASISAT 137 (489)
Q Consensus 67 ~~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~--~~~------~~~~~~~i~~~l~~~ 137 (489)
....+...|.+.+ +++.+ +.+.++..+...++..++.++.|+++||+|||+ ... .+.++..+.......
T Consensus 231 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (399)
T TIGR00893 231 LGFFLTWFPTYLVQERGLS--ILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY 308 (399)
T ss_pred HHHHHHHHHHHHHHHhccc--HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc
Confidence 3334445565544 45554 345577888888888999999999999999996 111 111111111111222
Q ss_pred cchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHH
Q 011275 138 TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (489)
Q Consensus 138 ~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~ 217 (489)
.++.......-++.+.+.+ ..+....++.|.+|+++||+..++.+....+|..+++.+.+.+.+..+.|+..|++..+.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~ 387 (399)
T TIGR00893 309 VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAAL 387 (399)
T ss_pred chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHH
Confidence 2344444444445555444 677888899999999999999999999999999999988887777666357777765444
Q ss_pred HHHH
Q 011275 218 AAIL 221 (489)
Q Consensus 218 ~~~~ 221 (489)
.++.
T Consensus 388 ~~~~ 391 (399)
T TIGR00893 388 ALIG 391 (399)
T ss_pred HHHH
Confidence 4433
No 143
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.06 E-value=1.4e-09 Score=110.33 Aligned_cols=148 Identities=18% Similarity=0.167 Sum_probs=100.4
Q ss_pred eccchhhhh-hhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHH--HHhcchHHHHHH
Q 011275 70 VNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI--SATTRNLIGMLL 146 (489)
Q Consensus 70 ~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l--~~~~~~~~~l~~ 146 (489)
....+|.+. +++|++.. +.++..+.+.++..+|.++.|+++||+|||+.+.....+..++..+ .....+...+.+
T Consensus 277 ~~~~~p~yl~~~~g~s~~--~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (467)
T PRK09556 277 IDNWSPVYAFQELGFSKE--DAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLA 354 (467)
T ss_pred HHHHHHHHHHHccCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 344566554 56777644 4567888888899999999999999999998876654444433222 223456666778
Q ss_pred HHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHH-HHHHHHHhhccccc------------CCchhHHHHHH
Q 011275 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCL-GLMGSLLIGIPVKE------------IAGWWRICFWV 213 (489)
Q Consensus 147 ~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~-G~~~~~~~~~~~~~------------~~~~wr~~f~~ 213 (489)
.+++.|+...+..........|.+|+++||.+.++.+....+ |..+++.+.+.+.+ ..+ |+..|++
T Consensus 355 ~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~-~~~~f~~ 433 (467)
T PRK09556 355 SLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTG-WAGTFAA 433 (467)
T ss_pred HHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccC-hHHHHHH
Confidence 888888654333333335677999999999999999877775 65555555555444 334 7888876
Q ss_pred HHHHHHH
Q 011275 214 SIVPAAI 220 (489)
Q Consensus 214 ~~~~~~~ 220 (489)
..+..++
T Consensus 434 ~~~~~~~ 440 (467)
T PRK09556 434 LDIAAIG 440 (467)
T ss_pred HHHHHHH
Confidence 5444443
No 144
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.05 E-value=1.7e-08 Score=101.44 Aligned_cols=155 Identities=16% Similarity=0.142 Sum_probs=106.0
Q ss_pred HhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHH
Q 011275 310 YFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSV 386 (489)
Q Consensus 310 ~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (489)
.+.+.+.++.+.+. +.......++..++.++.|++.||+|||+.+.++.+..+++..+.....+ .+...
T Consensus 44 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--------~~~l~ 115 (434)
T PRK11663 44 AAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSS--------LWAFA 115 (434)
T ss_pred HhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhH--------HHHHH
Confidence 44566666666653 45556677888899999999999999999988877776666554433211 11111
Q ss_pred HHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Q 011275 387 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
....+..+..+.+ .+....+..|.+|++.|++++++.+....++..+++.+...+.+..++.+.|.+.++++++..+..
T Consensus 116 ~~~~l~g~~~g~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~ 194 (434)
T PRK11663 116 LLWVLNAFFQGWG-WPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFL 194 (434)
T ss_pred HHHHHHHHHHHcc-chHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 1111222222222 344556789999999999999999999999999999888888788898888888777665554444
Q ss_pred HhhcccC
Q 011275 467 KRNVVET 473 (489)
Q Consensus 467 ~~~~pet 473 (489)
...+||+
T Consensus 195 ~~~~~~~ 201 (434)
T PRK11663 195 CWRLRDK 201 (434)
T ss_pred HHHcCCC
Confidence 4445554
No 145
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.05 E-value=1.1e-09 Score=112.07 Aligned_cols=140 Identities=16% Similarity=0.061 Sum_probs=104.3
Q ss_pred ccchhhhh-hhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc--chHHHHHHH
Q 011275 71 NEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT--RNLIGMLLG 147 (489)
Q Consensus 71 ~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~--~~~~~l~~~ 147 (489)
...+|.+. +++|.+. .+.++..+.+.++..+|.++.|+++||+|||+++..+.++..++.++.... .+.+.+.+.
T Consensus 295 ~~~lp~~l~~~~g~~~--~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (496)
T PRK03893 295 QALLPTYLKTDLGYDP--HTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLL 372 (496)
T ss_pred HHHHHHHHHhhcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence 34566666 4777654 356788899999999999999999999999999988877666655444332 334444455
Q ss_pred HHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHH
Q 011275 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (489)
Q Consensus 148 R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~ 213 (489)
.++.+....+..+..+.++.|.+|+++||+.++++.....+|..+++++++.+.+..+ |+..+..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~ 437 (496)
T PRK03893 373 LFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALAS 437 (496)
T ss_pred HHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHH
Confidence 5555544444455667789999999999999999998889999899998888877766 5666544
No 146
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.05 E-value=1.4e-09 Score=110.88 Aligned_cols=284 Identities=18% Similarity=0.262 Sum_probs=185.6
Q ss_pred HHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHH
Q 011275 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (489)
Q Consensus 53 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~ 132 (489)
++.+++..+..+...+.++..+.++.+.++++.++ .|++.+.+=+|..+...+..+..-|.-|-+.+-++.+++++++
T Consensus 99 l~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~--sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 99 LVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQ--SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCc--ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 44556666777777788889999999999997664 6899999999999999999999999999999999999999999
Q ss_pred HHHHhc--------------------c------------------------------h-HH-HHHHHHHHHhhhcccccc
Q 011275 133 SISATT--------------------R------------------------------N-LI-GMLLGRFVVGTGMGLGPT 160 (489)
Q Consensus 133 ~l~~~~--------------------~------------------------------~-~~-~l~~~R~l~G~g~g~~~~ 160 (489)
+++++- + + ++ .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 998651 0 0 12 456799999999999999
Q ss_pred cccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccc----cC-----------Cch---hHHHHHHHHHHHHHHH
Q 011275 161 VAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK----EI-----------AGW---WRICFWVSIVPAAILC 222 (489)
Q Consensus 161 ~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~----~~-----------~~~---wr~~f~~~~~~~~~~~ 222 (489)
.+..|+=|...+++-..+.+++.....+|+++|.++|.... +. ..| |+.-|++.....++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988875421 11 123 6666777666666666
Q ss_pred HHhhcccCChHHHHhcCCHHHHHHHHHHHhCCCc-hhHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHh
Q 011275 223 LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSH-VKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQ 301 (489)
Q Consensus 223 ~~~~~~pEsp~~l~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (489)
+.++++|.+.. ...+..+++ +.+....++. .++.. ...+.-..-+...+++++++.+....++..+..
T Consensus 337 ~p~f~fPk~lp---~~~~~~~~~-~~~~~k~~~~~~~~~~----~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~--- 405 (735)
T KOG3626|consen 337 VPLFFFPKELP---KSQKRKRAR-DLHVLKTESGGAKSDK----TFGKKIKDFPKSIKRLLSNPIFMLVVLASVIES--- 405 (735)
T ss_pred HHHHhCcccCc---cccccchhh-hhcccccccccccCCc----chhhhHHHHHHHHHHHhcCchHHHHHHHHHHHH---
Confidence 66777776532 111111110 0000000000 00000 000000001223455666655544443333322
Q ss_pred hhhHHHHHHhHHHHH-HhcCCCcchHHHHHHH----HHHHHHHHHHHHHhhcCC
Q 011275 302 LSGINAIFYFSSSVF-KSAGLSSGLANVFVGI----ANLLGSVVAMVLMDKLGR 350 (489)
Q Consensus 302 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i----~~~~g~~~~g~l~dr~gr 350 (489)
..+.....|.|.++ ++.+.+++.++...+. +..+|.+++|++..|+.-
T Consensus 406 -~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl 458 (735)
T KOG3626|consen 406 -LAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKL 458 (735)
T ss_pred -HHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecc
Confidence 22333334455444 4577777766655543 344677889999998754
No 147
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.05 E-value=7.4e-09 Score=102.19 Aligned_cols=156 Identities=13% Similarity=0.107 Sum_probs=107.2
Q ss_pred HHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHH
Q 011275 312 SSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 388 (489)
Q Consensus 312 ~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (489)
.|.+.++.+.+. ++......++..++.++.|++.||+|||+.+..+.....++........ + . +.....
T Consensus 28 ~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~-----~-~--~~~~~~ 99 (385)
T TIGR00710 28 FPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN-----N-I--ETLLVL 99 (385)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc-----c-H--HHHHHH
Confidence 345555556543 4566667788899999999999999999998887766666555443321 1 1 111111
Q ss_pred HHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Q 011275 389 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 468 (489)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 468 (489)
.++.+.+.+ ...+....+..|.+|++.|++..++......++..+++.+.+.+.+..++...+.+.++++++..+....
T Consensus 100 ~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 100 RFVQAFGAS-AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHcchh-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 1124455678999999999999999999999999989888877777788888888877777776666666
Q ss_pred hcccCCCC
Q 011275 469 NVVETKGK 476 (489)
Q Consensus 469 ~~pet~~~ 476 (489)
..||++.+
T Consensus 179 ~~~~~~~~ 186 (385)
T TIGR00710 179 ILPETLPY 186 (385)
T ss_pred hCCCCCCC
Confidence 67877554
No 148
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.05 E-value=1.5e-08 Score=100.99 Aligned_cols=156 Identities=19% Similarity=0.146 Sum_probs=105.6
Q ss_pred hHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHH
Q 011275 311 FSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVG 387 (489)
Q Consensus 311 ~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (489)
..+.+.++.+.+. ++......++..++.+..|++.||+|||+++..+.+...++..+.....+ .. . +.+
T Consensus 30 ~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~-----~~-~-l~~- 101 (412)
T TIGR02332 30 AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATG-----PE-S-LYL- 101 (412)
T ss_pred HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcC-----HH-H-HHH-
Confidence 3444445555543 45566677888899999999999999999988777766666555443211 11 1 111
Q ss_pred HHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH------HhCCchhHHHHHHHHHH
Q 011275 388 GMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE------QLGPQLLYSIFGTFCLM 461 (489)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~ 461 (489)
.-++.+++.+ +..|....+..|.+|++.|++..++.+....++..+++.+...+.+ ..||++.|.+.++..++
T Consensus 102 ~r~l~G~~~~-~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~ 180 (412)
T TIGR02332 102 LRILVGIAEA-GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVI 180 (412)
T ss_pred HHHHHHHHHh-hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHH
Confidence 1112222222 1235555678999999999999999999888888888877666553 35888899888887776
Q ss_pred HHHHHHhhcccCCC
Q 011275 462 AVAFVKRNVVETKG 475 (489)
Q Consensus 462 ~~~~~~~~~pet~~ 475 (489)
..+..+..+||++.
T Consensus 181 ~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 181 LGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHhhccCCCcc
Confidence 66666667888764
No 149
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.04 E-value=3.6e-09 Score=107.48 Aligned_cols=161 Identities=15% Similarity=0.016 Sum_probs=112.3
Q ss_pred eeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHh-----cc---
Q 011275 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-----TR--- 139 (489)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~-----~~--- 139 (489)
.......|.+.+++|.+.+ +.++......++..++.++.|+++||+|||+.+..+.++.+++.++.++ ..
T Consensus 301 ~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (481)
T TIGR00879 301 NAIMYYSPTIFENAGVSTD--HAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSS 378 (481)
T ss_pred eehHHHHHHHHHHcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcc
Confidence 3344556777788887753 3467777788888899999999999999999999888877777666652 11
Q ss_pred ---hHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHH
Q 011275 140 ---NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (489)
Q Consensus 140 ---~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~ 216 (489)
+...+....++.+.......+....++.|.+|+++|++..++......+|..+++.+...+.+..+ |++.|++.+.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~-~~~~f~~~~~ 457 (481)
T TIGR00879 379 KSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG-VGGVFIFFGG 457 (481)
T ss_pred cchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccceehhHHH
Confidence 233333333333333333445666778999999999999999999999998888877666655555 6877776554
Q ss_pred HHHHHHHH-hhcccCC
Q 011275 217 PAAILCLA-MVFCAES 231 (489)
Q Consensus 217 ~~~~~~~~-~~~~pEs 231 (489)
..++..+. .++.||+
T Consensus 458 ~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 458 LNVLGLIFVYFFLPET 473 (481)
T ss_pred HHHHHHHHHheecccC
Confidence 44444333 3456665
No 150
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.04 E-value=2e-08 Score=101.94 Aligned_cols=151 Identities=10% Similarity=0.052 Sum_probs=94.3
Q ss_pred HhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHH
Q 011275 310 YFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSV 386 (489)
Q Consensus 310 ~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (489)
.+.+.+.++.+.+. +.......++..++.++.|+++||+|||+++..+.+..+++.++..... + .....
T Consensus 57 ~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~-----s-~~~l~-- 128 (476)
T PLN00028 57 PLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS-----S-ATGFI-- 128 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc-----C-HHHHH--
Confidence 34455666666653 3445556678889999999999999999988776665555544333221 1 11111
Q ss_pred HHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH---------HhCCchhHHHHHH
Q 011275 387 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE---------QLGPQLLYSIFGT 457 (489)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~~ 457 (489)
...++.+++. +..+....+++|.+|++.|+++.|+.+...++++.+++.+.+.+.. ..||++.|.+.++
T Consensus 129 ~~r~l~G~~~--~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~ 206 (476)
T PLN00028 129 AVRFFIGFSL--ATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGL 206 (476)
T ss_pred HHHHHHHHHH--HhhHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHH
Confidence 1111122221 1112223467899999999999999988888887777665543322 1368888888888
Q ss_pred HHHHHHHHHHhhc
Q 011275 458 FCLMAVAFVKRNV 470 (489)
Q Consensus 458 ~~~~~~~~~~~~~ 470 (489)
++++..+...+..
T Consensus 207 l~l~~~l~~~~~~ 219 (476)
T PLN00028 207 LHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHc
Confidence 7776655544443
No 151
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.04 E-value=2.9e-09 Score=105.09 Aligned_cols=133 Identities=12% Similarity=0.019 Sum_probs=115.5
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHH
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~ 149 (489)
+....|.+.+|.|.+.+ +.|...+...++..++.++.+++.||+|+|+.+.++.++..+...+.+++++.+.+++.++
T Consensus 224 ~~~~~~~~l~~~g~s~~--~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~ 301 (382)
T TIGR00902 224 YYGFSAIYWQAAGISAS--ATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQI 301 (382)
T ss_pred HHHHHHHHHHHCCCCHh--HHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHH
Confidence 34455666677777644 4577777888888899999999999999999999999999999999999999999999999
Q ss_pred HHhhhcccccccccchhcccCCcccchhhhhHHH-HHHHHHHHHHHHhhcccccCCc
Q 011275 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAG 205 (489)
Q Consensus 150 l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~ 205 (489)
++|+..|...+....++.+. |+++|++..++++ ....+|..+++++++.+.+..+
T Consensus 302 l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g 357 (382)
T TIGR00902 302 LHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG 357 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999998 9999999999986 5778899999999998887766
No 152
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.04 E-value=1.7e-09 Score=106.81 Aligned_cols=143 Identities=13% Similarity=0.106 Sum_probs=110.5
Q ss_pred chhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHh
Q 011275 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVG 152 (489)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G 152 (489)
.+|.+.++.|.+.+ +.++..+...++..+++++.|+++||+|||+++..+..+..++..... . ........++.|
T Consensus 222 ~lp~~~~~~g~s~~--~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g 296 (381)
T PRK03633 222 LMPLYLNHQGMSDA--SIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILG 296 (381)
T ss_pred HHHHHHHHcCCCHH--HHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHH
Confidence 46777777676543 457778888889999999999999999999999888777777655443 2 233455778888
Q ss_pred hhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHH
Q 011275 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (489)
Q Consensus 153 ~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~ 221 (489)
++.+...+....++.|..|+++++...+.+.....+|..++|.+++.+.++.+ |++.|.+.+...++.
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~ 364 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIY 364 (381)
T ss_pred HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHH
Confidence 88777788888888999999888888888888899999999998888777666 578887654444433
No 153
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.03 E-value=1.1e-08 Score=102.10 Aligned_cols=153 Identities=16% Similarity=0.099 Sum_probs=103.1
Q ss_pred HHHHhcCCCcc---hHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHH
Q 011275 314 SVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGML 390 (489)
Q Consensus 314 ~~~~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (489)
.+-++.+.+.. .......++..++.++.|+++||+|||+++..+.....++....... +.... +. ..-+
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a------~~~~~-l~-~~r~ 112 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT------TSMTQ-FL-IARF 112 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc------CCHHH-HH-HHHH
Confidence 34445555433 34455668888899999999999999999888766665555443321 11111 11 1112
Q ss_pred HHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Q 011275 391 MFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNV 470 (489)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 470 (489)
+.+++.+ ...+....+..|.+|++.|++.+++......++..+++.+...+.+..+|.+.|.+.+++.++..++....+
T Consensus 113 l~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~l 191 (413)
T PRK15403 113 IQGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAM 191 (413)
T ss_pred HHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2222211 112344567889999999999999999999999888887776676777888899888887777766656678
Q ss_pred ccCCC
Q 011275 471 VETKG 475 (489)
Q Consensus 471 pet~~ 475 (489)
||++.
T Consensus 192 p~~~~ 196 (413)
T PRK15403 192 PETVK 196 (413)
T ss_pred CCCcc
Confidence 88764
No 154
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.03 E-value=3.2e-09 Score=105.17 Aligned_cols=159 Identities=17% Similarity=0.166 Sum_probs=113.7
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcc-hHHHHHHHH
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR-NLIGMLLGR 148 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~-~~~~l~~~R 148 (489)
....+|.+.++.|.+.+ +.+...+.+.++..+|.++.|++.||+|||+.+..+..+..++..+....+ +...+. -
T Consensus 224 ~~~~lp~~l~~~g~s~~--~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~ 299 (393)
T PRK09705 224 LIAWLPAFYIEIGASAQ--YSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--A 299 (393)
T ss_pred HHHHHHHHHHHcCCChh--hhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--H
Confidence 34456667777776644 457888899999999999999999999999999888777777665544333 322222 2
Q ss_pred HHHhhhcccccccccchhcccCC-cccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHH-HHHhh
Q 011275 149 FVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL-CLAMV 226 (489)
Q Consensus 149 ~l~G~g~g~~~~~~~~~i~e~~p-~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~ 226 (489)
++.|++.+...+.......|..+ +++||+..++.+....++..++|.+.+.+.+..+.|+..|++..+..++. .....
T Consensus 300 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK09705 300 MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLR 379 (393)
T ss_pred HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 46788888777776666667774 67899999999888888888888888877776665788777654443333 33345
Q ss_pred cccCCh
Q 011275 227 FCAESP 232 (489)
Q Consensus 227 ~~pEsp 232 (489)
+.||++
T Consensus 380 ~~~~~~ 385 (393)
T PRK09705 380 FAPARF 385 (393)
T ss_pred hccccc
Confidence 667763
No 155
>TIGR00895 2A0115 benzoate transport.
Probab=99.03 E-value=8e-09 Score=102.29 Aligned_cols=158 Identities=21% Similarity=0.222 Sum_probs=107.4
Q ss_pred HHHhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHH
Q 011275 308 IFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYL 384 (489)
Q Consensus 308 ~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (489)
..++.+.+.+..+.+. ++......++..++.++.|+++||+|||+.+..+.....++..+..... .. ..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~------~~--~~ 107 (398)
T TIGR00895 36 MGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALAT------NV--TQ 107 (398)
T ss_pred HHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHcc------ch--HH
Confidence 3345555556666553 3455666788889999999999999999998887766665554433211 11 11
Q ss_pred HHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Q 011275 385 SVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVA 464 (489)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 464 (489)
.....++.+++.+ ...+....+..|.+|++.|+++.++......++..+++.+.+.+.+..++...+.+.++++++..+
T Consensus 108 ~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 186 (398)
T TIGR00895 108 LLILRFLAGLGLG-GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLL 186 (398)
T ss_pred HHHHHHHHhcccc-cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHH
Confidence 1111222222111 223556678899999999999999999999999999998887877778888888777666666655
Q ss_pred HHHhhcccCC
Q 011275 465 FVKRNVVETK 474 (489)
Q Consensus 465 ~~~~~~pet~ 474 (489)
.....+||+.
T Consensus 187 ~~~~~~~~~~ 196 (398)
T TIGR00895 187 LLMRFLPESI 196 (398)
T ss_pred HHHHhCCCCC
Confidence 5556677764
No 156
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.02 E-value=1.2e-08 Score=101.09 Aligned_cols=158 Identities=15% Similarity=0.099 Sum_probs=105.3
Q ss_pred HhHHHHHHhcCCCcc---hHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHH
Q 011275 310 YFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSV 386 (489)
Q Consensus 310 ~~~~~~~~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (489)
...+.+.++.+.+.. +......++..++.++.|+++||+|||+.+..+.....++..+..... .... +.
T Consensus 24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~------~~~~-~~- 95 (392)
T PRK10473 24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE------TSSL-FL- 95 (392)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC------cHHH-HH-
Confidence 445566666665543 445566678888999999999999999998887766666555443221 1111 11
Q ss_pred HHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Q 011275 387 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
....+.+...+ ...+....+..|.+|++.|++..++.+....++..++|.+...+.+..++...+.+.+.++++..++.
T Consensus 96 ~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 96 AGRFLQGIGAG-CCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred HHHHHHHhhhh-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHH
Confidence 11111111111 11234556789999999999999999999888888888776666667788888888887777766666
Q ss_pred HhhcccCCCC
Q 011275 467 KRNVVETKGK 476 (489)
Q Consensus 467 ~~~~pet~~~ 476 (489)
...+||++.+
T Consensus 175 ~~~~~~~~~~ 184 (392)
T PRK10473 175 LFILKETRPA 184 (392)
T ss_pred HHHcCCCCCc
Confidence 5667776543
No 157
>PRK03699 putative transporter; Provisional
Probab=99.01 E-value=2.2e-09 Score=106.49 Aligned_cols=154 Identities=12% Similarity=0.071 Sum_probs=115.3
Q ss_pred ccchhhhh-hhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHH
Q 011275 71 NEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (489)
Q Consensus 71 ~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~ 149 (489)
....|.+. +++|++.+ +.++..+.+.++..+|.++.|+++||+|||+.+.....+..+...+....++...+.+.-+
T Consensus 225 ~~~~p~~l~~~~g~s~~--~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (394)
T PRK03699 225 ISWVPEYAQKKFGMSLE--DAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAIL 302 (394)
T ss_pred HHHHHHHHHHHcCCChH--HhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 44566666 45677644 4578888888999999999999999999999998877777776666667778777777888
Q ss_pred HHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcc
Q 011275 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (489)
Q Consensus 150 l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 228 (489)
+.|++.+..++....+..|..|. ++++..+.......+|..++|.+.+.+.+..+ |+..++...+..++.......+
T Consensus 303 ~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 303 GLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHHHHH
Confidence 99998887777777777887764 46777788888888898888888877776666 5777776544444443333333
No 158
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.01 E-value=2.4e-09 Score=106.99 Aligned_cols=158 Identities=13% Similarity=0.068 Sum_probs=122.8
Q ss_pred ccchhhhhhh-cCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHH
Q 011275 71 NEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (489)
Q Consensus 71 ~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~ 149 (489)
+...|.+.++ +|.+.. ..+++.+.+.++..++.++.+++.||.++|+.+..+.++..++.++.+..++...+.++.+
T Consensus 243 ~~~~p~~~~~~~g~~~~--~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADEVWQMGAA--QIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHhccCCChh--HhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 3345666666 676543 4678888889999999999999999988888888888888888888888888888888899
Q ss_pred HHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHH-HHHHHHHhhcc
Q 011275 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP-AAILCLAMVFC 228 (489)
Q Consensus 150 l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~-~~~~~~~~~~~ 228 (489)
+.|++.+...+....++.|..|++.||+..+++.....+|..+|+.+.+.+.+..+ .+..++..+.. .++..+....+
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHhc
Confidence 99998887777777889999999999999999999999999888888887776655 35555544333 33333444455
Q ss_pred cCC
Q 011275 229 AES 231 (489)
Q Consensus 229 pEs 231 (489)
+|.
T Consensus 400 ~~~ 402 (417)
T PRK10489 400 GEL 402 (417)
T ss_pred ccc
Confidence 655
No 159
>PRK03545 putative arabinose transporter; Provisional
Probab=99.00 E-value=2.7e-08 Score=98.53 Aligned_cols=154 Identities=16% Similarity=0.096 Sum_probs=104.4
Q ss_pred HHHHHHhcCCCcc---hHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHH
Q 011275 312 SSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 388 (489)
Q Consensus 312 ~~~~~~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (489)
.+.+.++.+.+.. +......++..++.+..|.+.||+|||+++..+.....++........+ ... +.+ .
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~------~~~-l~~-~ 103 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWN------FTV-LLI-S 103 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhcc------HHH-HHH-H
Confidence 4555566666543 4444566677788888999999999999988887766666554433211 111 111 1
Q ss_pred HHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Q 011275 389 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 468 (489)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 468 (489)
.++.+...+ ...|....+..|.+|++.|++++|+......++..+++.+...+.+..+|.+.|.+.++++++..+....
T Consensus 104 r~~~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 104 RIGIAFAHA-IFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIK 182 (390)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Confidence 111111111 1224445678899999999999999999999999888888777777789999998888887777666555
Q ss_pred hcccCC
Q 011275 469 NVVETK 474 (489)
Q Consensus 469 ~~pet~ 474 (489)
.+||.+
T Consensus 183 ~~~~~~ 188 (390)
T PRK03545 183 LLPLLP 188 (390)
T ss_pred hCCCCC
Confidence 666643
No 160
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.99 E-value=6.2e-09 Score=106.24 Aligned_cols=158 Identities=16% Similarity=0.057 Sum_probs=109.5
Q ss_pred HhHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHH
Q 011275 310 YFSSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSV 386 (489)
Q Consensus 310 ~~~~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (489)
...+.+.++.+.+ .++......++..++.++.|+++||+|||+.+..+.....++....... +... ..+
T Consensus 23 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------~~~~--~l~ 94 (485)
T TIGR00711 23 VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA------PNLE--LMI 94 (485)
T ss_pred HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc------CCHH--HHH
Confidence 3445555555554 4567777889999999999999999999999888777666655443221 1111 111
Q ss_pred HHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Q 011275 387 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
....+.+.+. ....|....+..|.+|++.|+++.++......++..+++.+.+.+.+..+|.+.|.+.+.++++..+..
T Consensus 95 ~~~~~~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~ 173 (485)
T TIGR00711 95 IFRVIQGFGG-GPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVA 173 (485)
T ss_pred HHHHHHHhhh-hhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHH
Confidence 1112222211 123355667889999999999999999999999998888887777777888888888777776666656
Q ss_pred HhhcccCCCC
Q 011275 467 KRNVVETKGK 476 (489)
Q Consensus 467 ~~~~pet~~~ 476 (489)
....||++.+
T Consensus 174 ~~~~~~~~~~ 183 (485)
T TIGR00711 174 FFILPRDKPA 183 (485)
T ss_pred HHHcCCcccc
Confidence 5667776543
No 161
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.99 E-value=1.7e-08 Score=98.81 Aligned_cols=153 Identities=15% Similarity=0.037 Sum_probs=99.6
Q ss_pred HHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHH
Q 011275 312 SSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 388 (489)
Q Consensus 312 ~~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (489)
.+.+.++.+.+ .++......++..++.+..|+++||+|||+++.........+. ...... ... ..+. ..
T Consensus 14 lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~-~~~~~~-----~~~-~~l~-~~ 85 (368)
T TIGR00903 14 LSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA-GRLLDP-----FNY-EWLL-AC 85 (368)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH-HHHHHh-----ccH-HHHH-HH
Confidence 34444555544 3455566678888999999999999999987644332222221 111110 111 1111 11
Q ss_pred HHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Q 011275 389 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 468 (489)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 468 (489)
-++.+. +.+..+......+|.+|++.|++++++......++..+++.+...+.+..||+..|.+.+++.++..++.+.
T Consensus 86 R~l~G~--g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 86 QLLAAL--GQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHh--HhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 111122 222222333456899999999999999999999999999888788878889999998888888777777777
Q ss_pred hcccCC
Q 011275 469 NVVETK 474 (489)
Q Consensus 469 ~~pet~ 474 (489)
.+||.+
T Consensus 164 ~lp~~p 169 (368)
T TIGR00903 164 ALPALP 169 (368)
T ss_pred HcCCCC
Confidence 888864
No 162
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.97 E-value=2.6e-08 Score=97.33 Aligned_cols=140 Identities=14% Similarity=0.065 Sum_probs=94.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccc
Q 011275 323 SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGP 402 (489)
Q Consensus 323 ~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (489)
.++......++..++.++.|+++||+|||+++..+.....++..+........ ... .+.......+...+.+. ..|
T Consensus 36 ~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~l~g~~~~~-~~~ 111 (365)
T TIGR00900 36 LSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLG-GLN--IWQVYVLAGILAIAQAF-FTP 111 (365)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcC-CCc--HHHHHHHHHHHHHHHHH-HHH
Confidence 35566677788889999999999999999998877666555554443332111 001 11111112222222221 234
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Q 011275 403 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 403 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
....+.+|.+|++.|++..++......++..+++.+...+.+..++...|.+.++..++..++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 175 (365)
T TIGR00900 112 AYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLI 175 (365)
T ss_pred HHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 5566889999999999999999999999999999888877788888888777666555554433
No 163
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.96 E-value=4.4e-09 Score=104.47 Aligned_cols=139 Identities=20% Similarity=0.139 Sum_probs=106.7
Q ss_pred chhhhh-hhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHH-HHHhcchHHHHHHHHHH
Q 011275 73 PLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS-ISATTRNLIGMLLGRFV 150 (489)
Q Consensus 73 ~~~~i~-~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~-l~~~~~~~~~l~~~R~l 150 (489)
..|.+. +++|++. .+.+++.+...++..++.++.|+++||+|||+.+..+.++..+... +.....+.+.+.+..++
T Consensus 260 ~~~~~~~~~~g~s~--~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (405)
T TIGR00891 260 LLPTYLKADLGLSP--HTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFF 337 (405)
T ss_pred hhHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 344443 4566654 3557888888999999999999999999999999887766533322 33345666667777788
Q ss_pred HhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHH
Q 011275 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (489)
Q Consensus 151 ~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~ 213 (489)
.|+..++..+....++.|.+|+++||++.++.+....+|..+++++++.+.+..+.|+..+..
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 338 QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 888777777778889999999999999999999989999888998888877766645665543
No 164
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.95 E-value=2.7e-08 Score=101.64 Aligned_cols=157 Identities=17% Similarity=0.066 Sum_probs=105.8
Q ss_pred hHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHH
Q 011275 311 FSSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVG 387 (489)
Q Consensus 311 ~~~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (489)
-.|.+.++.+.+ .++......++...+.+..|+++||+|||+.+..+.....++........ + . +..+.
T Consensus 28 a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~-----~-~--~~li~ 99 (495)
T PRK14995 28 AAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSP-----T-A--SWLIA 99 (495)
T ss_pred HHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcC-----C-H--HHHHH
Confidence 345555555543 34566667778888889999999999999999888777776665543321 1 1 11111
Q ss_pred HHHHHHHHHhcCccccccccccccC-CchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Q 011275 388 GMLMFVLTFALGAGPVPSLLLPEIF-PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~e~~-p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
.-.+.+++.+. ..|.......+.+ |++.|+++.|+......++..++|.+.+.+.+..+|++.|.+...++++..++.
T Consensus 100 ~r~l~G~g~~~-~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~ 178 (495)
T PRK14995 100 TRALLAIGAAM-IVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLT 178 (495)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHH
Confidence 12222222221 2233333344544 789999999999999999999999988888888899999888877777776666
Q ss_pred HhhcccCCCC
Q 011275 467 KRNVVETKGK 476 (489)
Q Consensus 467 ~~~~pet~~~ 476 (489)
.+.+||.+++
T Consensus 179 ~~~l~~~~~~ 188 (495)
T PRK14995 179 ARYVPRQAGR 188 (495)
T ss_pred HHhCCCCCCC
Confidence 6677776443
No 165
>PRK09952 shikimate transporter; Provisional
Probab=98.95 E-value=9.3e-09 Score=103.39 Aligned_cols=152 Identities=16% Similarity=0.120 Sum_probs=99.5
Q ss_pred hhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHh---c-chHHHHHHHHHHHhh
Q 011275 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT---T-RNLIGMLLGRFVVGT 153 (489)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~---~-~~~~~l~~~R~l~G~ 153 (489)
.+++|.+.+. .............++.++.|+++||+|||+++..+.++..++...... . ++...+++.-++.|+
T Consensus 278 ~~~~g~s~~~--~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 278 TQNLGLPREL--FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHhcCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 4566665432 223333444555678889999999999999998876665554433222 2 234444456677788
Q ss_pred hcccccccccchhcccCCcccchhhhhHH-HHHHHHHHHHHHHhhcccccCC-chhHHHHHHHHHHHHHHHHHhhcccCC
Q 011275 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFI-QIATCLGLMGSLLIGIPVKEIA-GWWRICFWVSIVPAAILCLAMVFCAES 231 (489)
Q Consensus 154 g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~-~~~~~~G~~~~~~~~~~~~~~~-~~wr~~f~~~~~~~~~~~~~~~~~pEs 231 (489)
+.+...+....++.|.+|++.|+...++. ..+..+|..++|.+...+.+.. +.|+..+....+..++..+..+..+|+
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 87777777888999999999998888874 4555577777777766654432 336877776555555555554555554
No 166
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.95 E-value=3.7e-08 Score=98.09 Aligned_cols=154 Identities=14% Similarity=0.091 Sum_probs=102.6
Q ss_pred HHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHH
Q 011275 313 SSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGM 389 (489)
Q Consensus 313 ~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (489)
+.+.++.+.+. +.......++..++.++.|.++||+|||+.+..+.....++........ + ... + +...
T Consensus 37 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~-----~-~~~-l-~~~~ 108 (406)
T PRK15402 37 LAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ-----S-IEQ-F-TLLR 108 (406)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc-----c-HHH-H-HHHH
Confidence 34445555543 3445566788889999999999999999998877666665554433221 1 111 1 1111
Q ss_pred HHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Q 011275 390 LMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRN 469 (489)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 469 (489)
.+.+...+ ...+....+..|.+|++.|.+..++......++..++|.+...+.+..++.+.+.+.++++++..+.....
T Consensus 109 ~l~G~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~ 187 (406)
T PRK15402 109 FLQGIGLC-FIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRA 187 (406)
T ss_pred HHHHhHhh-hHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHh
Confidence 11111111 11244556778999999999999998888777888888777777777788888888888777776666666
Q ss_pred cccCCC
Q 011275 470 VVETKG 475 (489)
Q Consensus 470 ~pet~~ 475 (489)
.||+++
T Consensus 188 ~~~~~~ 193 (406)
T PRK15402 188 MPETAG 193 (406)
T ss_pred CCCCCc
Confidence 788764
No 167
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.94 E-value=1.1e-08 Score=101.70 Aligned_cols=149 Identities=11% Similarity=0.064 Sum_probs=105.8
Q ss_pred ccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHH-HhHHHHHHHHHHHHh-----cchHHHH
Q 011275 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ-LCALPMIIGASISAT-----TRNLIGM 144 (489)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~-~~~~~~~i~~~l~~~-----~~~~~~l 144 (489)
....|.+.+++|.+.+ +.++..+...++..++.++.|+++||+|||+.+. .+.+...++...... .++.+.+
T Consensus 242 ~~~~p~~~~~~g~s~~--~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~ 319 (402)
T TIGR00897 242 AVFLPMFVAELGFSTS--EWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVA 319 (402)
T ss_pred HHHHHHHHHHcCCChh--HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHH
Confidence 3456777788887654 3467777788899999999999999999988764 333333333333221 3456667
Q ss_pred HHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHH
Q 011275 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (489)
Q Consensus 145 ~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 224 (489)
.+..++.|++.+...+. ...+.|..| ++||+..++++....+|..++|.+++.+.+..+ |+..|++.++..++..+.
T Consensus 320 ~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~i~~~~ 396 (402)
T TIGR00897 320 LIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWIFAALYVVSAFL 396 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHHHHHH
Confidence 77888899887766543 345677655 589999999999999999889988877777767 577777655544444333
No 168
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.93 E-value=4.2e-08 Score=98.39 Aligned_cols=155 Identities=21% Similarity=0.277 Sum_probs=99.6
Q ss_pred HhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHH
Q 011275 310 YFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSV 386 (489)
Q Consensus 310 ~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (489)
+..+.+.++.+.+. ++......++..++.++.|+++||+|||+.+..+....+++..+...... . +...
T Consensus 39 ~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------~--~~l~ 110 (426)
T PRK12307 39 YIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASG------V--IMLT 110 (426)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhH------H--HHHH
Confidence 33444445555543 45566677888999999999999999999998887777776655443321 1 1111
Q ss_pred HHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Q 011275 387 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
..-.+.+.+.+ +..+....+..|.+|++.|+++.++......++..+++.+.+.+.+..+|.+.|.+... .++...+.
T Consensus 111 ~~r~l~G~g~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~-~~~~~~~~ 188 (426)
T PRK12307 111 LSRFIVGMGMA-GEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL-PVLLVIYI 188 (426)
T ss_pred HHHHHHHHHHh-hHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH-HHHHHHHH
Confidence 11111111111 12345556789999999999999999888888888888777666666788777765433 33333333
Q ss_pred HhhcccCC
Q 011275 467 KRNVVETK 474 (489)
Q Consensus 467 ~~~~pet~ 474 (489)
....||++
T Consensus 189 ~~~~p~~~ 196 (426)
T PRK12307 189 RARAPESK 196 (426)
T ss_pred HHHCCCCh
Confidence 44466654
No 169
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.93 E-value=7.2e-09 Score=86.01 Aligned_cols=136 Identities=20% Similarity=0.164 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccc
Q 011275 329 FVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLL 408 (489)
Q Consensus 329 ~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (489)
...++..++.++.+++.||+|||+.+..+.....++........ + . +.............. ...+....+.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-----~-~--~~~~~~~~~~g~~~~-~~~~~~~~~~ 76 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS-----N-I--TVLIIARFLQGFGAA-FALVAGAALI 76 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc-----c-H--HHHHHHHHHHHHHHH-HHHHhHHHHH
Confidence 34577888999999999999999988776665555544332211 1 1 111111122222221 1234556678
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccC
Q 011275 409 PEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVET 473 (489)
Q Consensus 409 ~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 473 (489)
.|.+|++.|++..++.+...+++..+++.+.+.+.+..++...+.+.+.+.++..+......|||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 77 ADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 99999999999999999999999999998888777777777788887777777776666667764
No 170
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.93 E-value=9.2e-08 Score=96.65 Aligned_cols=158 Identities=15% Similarity=0.072 Sum_probs=95.7
Q ss_pred hHHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHH
Q 011275 311 FSSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVG 387 (489)
Q Consensus 311 ~~~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (489)
..+.+.+. +.+ .++......++..++.++.|+++||+|||+++..+.++.+++.......... ... ......
T Consensus 51 ~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~--~~~--~~~~~~ 125 (452)
T PRK11273 51 AMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA--TSS--IAVMFV 125 (452)
T ss_pred hhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcc--ccc--HHHHHH
Confidence 34444444 554 3455666778889999999999999999999888877666665544332110 011 111111
Q ss_pred HHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCchhHHHHHHHHHHHHHHH
Q 011275 388 GMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLF-LRLLEQLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
...+.++..+.. .|.......|.+|++.|++++++.+....+++.+.+.+. ..+....+|.+.|.+.++++++..++.
T Consensus 126 ~~~l~gi~~g~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~ 204 (452)
T PRK11273 126 LLFLCGWFQGMG-WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFA 204 (452)
T ss_pred HHHHHHHHHhcc-chHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 122222322222 233334678899999999999998888777764444332 222223477778888777766655555
Q ss_pred HhhcccCC
Q 011275 467 KRNVVETK 474 (489)
Q Consensus 467 ~~~~pet~ 474 (489)
...+||++
T Consensus 205 ~~~~~~~~ 212 (452)
T PRK11273 205 FAMMRDTP 212 (452)
T ss_pred HHHccCCH
Confidence 55666653
No 171
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.93 E-value=5.7e-08 Score=95.20 Aligned_cols=150 Identities=15% Similarity=0.104 Sum_probs=92.8
Q ss_pred HHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHH
Q 011275 315 VFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLM 391 (489)
Q Consensus 315 ~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (489)
+.++.+.+ .++......++..++.++.|+++||+|||+.+..+.+...++..+...... . .+......++
T Consensus 28 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~-----~--~~~~~~~~~~ 100 (366)
T TIGR00886 28 IKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ-----S--YSVLLLLRLF 100 (366)
T ss_pred HHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh-----h--HHHHHHHHHH
Confidence 44455554 356667778889999999999999999999988887777766655433220 1 1111111222
Q ss_pred HHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------hCCchhH-HHHHHHHH
Q 011275 392 FVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ----------LGPQLLY-SIFGTFCL 460 (489)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~-~~~~~~~~ 460 (489)
.+.. .+..+....+.+|.+|++.|++..++.....+++..+++.+.+.+... .+|.+.+ ...+.+..
T Consensus 101 ~g~~--~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 178 (366)
T TIGR00886 101 IGIA--GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILL 178 (366)
T ss_pred HHHh--chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHH
Confidence 2222 122233455788999999999999999888888877777666555442 2566666 43344443
Q ss_pred HHHHHHHhhcccC
Q 011275 461 MAVAFVKRNVVET 473 (489)
Q Consensus 461 ~~~~~~~~~~pet 473 (489)
+..+......+|+
T Consensus 179 ~~~~~~~~~~~~~ 191 (366)
T TIGR00886 179 LPALLIFFVGADT 191 (366)
T ss_pred HHHHHHHHhcccC
Confidence 3333333334443
No 172
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.92 E-value=3.3e-08 Score=99.08 Aligned_cols=138 Identities=12% Similarity=0.079 Sum_probs=92.3
Q ss_pred hcCCCcc---hHHHHHHHHHHHHHHHHHHHHhhc-CCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHH
Q 011275 318 SAGLSSG---LANVFVGIANLLGSVVAMVLMDKL-GRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFV 393 (489)
Q Consensus 318 ~~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (489)
..+.+.. .......+...++.+++|+++||+ |||+.+.++.+...++..++..... .....+ ..+.+..
T Consensus 39 ~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~----~~~~~~---l~l~li~ 111 (493)
T PRK15462 39 QLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEI----HPSFLY---LSLAIIV 111 (493)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhc----chhHHH---HHHHHHH
Confidence 3455543 344455567778889999999999 9999988887777766544321110 001111 1111111
Q ss_pred HHHhcCccccccccccccCCch--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Q 011275 394 LTFALGAGPVPSLLLPEIFPSR--IRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAV 463 (489)
Q Consensus 394 ~~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 463 (489)
.+.+ ...|....+.+|+||++ .|.++.++.....++++.++|.+.+.+.+..|+...|.+.++..+++.
T Consensus 112 iG~G-~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~l 182 (493)
T PRK15462 112 CGYG-LFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGL 182 (493)
T ss_pred Hhcc-cccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHH
Confidence 2211 12355567899999986 799999999999999999999999888888888888877665444443
No 173
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.91 E-value=8.8e-08 Score=91.88 Aligned_cols=151 Identities=18% Similarity=0.174 Sum_probs=111.3
Q ss_pred hHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHH
Q 011275 311 FSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVG 387 (489)
Q Consensus 311 ~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (489)
..+++-++.+.+. |+....++.+..+++++-..+.||+.||++++....++.++..+....++.. . +.+.
T Consensus 35 LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~------~-Ll~a 107 (394)
T COG2814 35 LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFA------V-LLLA 107 (394)
T ss_pred chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHH------H-HHHH
Confidence 4566667777764 4566778899999999999999999999999888877777777665543321 1 1111
Q ss_pred HHHHHHHHHhcC-ccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Q 011275 388 GMLMFVLTFALG-AGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 388 ~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
-...+.+.| ..++.....+++.|+++|++++++...-..+...++.-+...+-+.+||+.+|.+.+.+.++..+..
T Consensus 108 ---R~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~ 184 (394)
T COG2814 108 ---RALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLL 184 (394)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 111111111 1235566889999999999999999987777666666665666678999999999999999999888
Q ss_pred Hhhcc
Q 011275 467 KRNVV 471 (489)
Q Consensus 467 ~~~~p 471 (489)
...+|
T Consensus 185 ~~~lP 189 (394)
T COG2814 185 WKLLP 189 (394)
T ss_pred HHhCC
Confidence 88899
No 174
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.89 E-value=5.2e-08 Score=96.72 Aligned_cols=148 Identities=16% Similarity=0.110 Sum_probs=97.4
Q ss_pred HHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHH
Q 011275 316 FKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMF 392 (489)
Q Consensus 316 ~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (489)
.++.+.+. |+......+...+..++.|+++||+|||+++..+.....++........ + . ..+. ....+.
T Consensus 38 ~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~-----~-~-~~l~-~~~~l~ 109 (400)
T PRK11646 38 VDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH-----E-P-WLLW-LSCILS 109 (400)
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc-----c-H-HHHH-HHHHHH
Confidence 34455554 3444444566666788899999999999998888777766665543221 1 1 1111 111222
Q ss_pred HHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccc
Q 011275 393 VLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVE 472 (489)
Q Consensus 393 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pe 472 (489)
+...+ ...|....+..|.+|++.|+++.++.....+++..++|.+.+.+. ..++.+.|.+.++.+++..+......||
T Consensus 110 g~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 110 GLGGT-LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 22221 123445567889999999999999999999999999998877776 6788888877777666555444445666
Q ss_pred C
Q 011275 473 T 473 (489)
Q Consensus 473 t 473 (489)
.
T Consensus 188 ~ 188 (400)
T PRK11646 188 Y 188 (400)
T ss_pred c
Confidence 4
No 175
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.89 E-value=3.5e-08 Score=93.67 Aligned_cols=157 Identities=14% Similarity=0.149 Sum_probs=116.9
Q ss_pred HHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHH
Q 011275 313 SSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGM 389 (489)
Q Consensus 313 ~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (489)
|.+..+.+++. |.......+..-++.++.|.++||.+.|..+.+++++.++..+++.... ...+.....
T Consensus 53 p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~--------s~~~~~~l~ 124 (448)
T COG2271 53 PALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP--------SLFLFAVLW 124 (448)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh--------HHHHHHHHH
Confidence 44445555553 4566777888889999999999999999999888888888877765443 122333334
Q ss_pred HHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHH--HHHHHHhCCchhHHHHHHHHHHHHHHHH
Q 011275 390 LMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLF--LRLLEQLGPQLLYSIFGTFCLMAVAFVK 467 (489)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 467 (489)
.+.+...++|+.|... .+..-||++.||+..++=+..+++|+.+.+.+. .....+.++...|.+-++++++..++.+
T Consensus 125 ~lng~fQg~Gwpp~~~-~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 125 VLNGWFQGMGWPPCAR-TITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred HHHHHHhcCCCcHHHH-HHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Confidence 4445566777666654 577889999999999999999999999999887 6666667888999988888877766554
Q ss_pred h---hcccCCCCCH
Q 011275 468 R---NVVETKGKSL 478 (489)
Q Consensus 468 ~---~~pet~~~~~ 478 (489)
+ -.||+.|.+-
T Consensus 204 ~~~rd~Pqs~GLP~ 217 (448)
T COG2271 204 FLLRDRPQSEGLPP 217 (448)
T ss_pred HHhCCCccccCCCC
Confidence 3 3577777654
No 176
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.89 E-value=1.7e-08 Score=101.26 Aligned_cols=153 Identities=18% Similarity=0.153 Sum_probs=118.8
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhh--HHHHHhHHHHHHHHHHHHh--------cchHHHHH
Q 011275 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR--RAFQLCALPMIIGASISAT--------TRNLIGML 145 (489)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr--~~~~~~~~~~~i~~~l~~~--------~~~~~~l~ 145 (489)
.-.+++|++..+. ....-...+..++|++++|++.||+|.| +++..+++++.+..+...+ .++-+.+.
T Consensus 307 ~a~~~lg~s~~~l--~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~ 384 (477)
T PF11700_consen 307 YATEVLGMSTTQL--IVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFW 384 (477)
T ss_pred HHHHhcCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHH
Confidence 3345888876653 3444455667789999999999999999 8998888888666666655 67788888
Q ss_pred HHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHh
Q 011275 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (489)
Q Consensus 146 ~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 225 (489)
+.-++.|+..|+.++...++.+|+.|+++.+.+.+++.+..-....+||++-+.+.+..+.-|+.++...+..++.+++.
T Consensus 385 ~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll 464 (477)
T PF11700_consen 385 VLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL 464 (477)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998877766655545777665444444444444
Q ss_pred hcccC
Q 011275 226 VFCAE 230 (489)
Q Consensus 226 ~~~pE 230 (489)
+.+++
T Consensus 465 ~~v~~ 469 (477)
T PF11700_consen 465 FFVDV 469 (477)
T ss_pred hhccc
Confidence 44443
No 177
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.89 E-value=7.7e-08 Score=94.97 Aligned_cols=155 Identities=15% Similarity=0.160 Sum_probs=104.2
Q ss_pred HHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHH
Q 011275 312 SSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 388 (489)
Q Consensus 312 ~~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (489)
.+.+.++.|.+ .++......++..++.++.|++.||+|||+++..+....+++..+..... + ... +.+ .
T Consensus 26 l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~-----~-~~~-l~~-~ 97 (382)
T PRK10091 26 LTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSS-----S-YLM-LAI-G 97 (382)
T ss_pred hHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhC-----c-HHH-HHH-H
Confidence 34444555544 35566777899999999999999999999998888777666655443321 1 111 111 1
Q ss_pred HHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Q 011275 389 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 468 (489)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 468 (489)
..+.+.+.+. ..+....+..|.+|++.|++.++.......++..+++.+...+.+..++++.|.+.+++.++..+....
T Consensus 98 r~l~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 98 RLVSGFPHGA-FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred HHHHHhhhHH-HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 1122221111 123344567899999999999999888888888888777666667778888888888877766665566
Q ss_pred hcccCCC
Q 011275 469 NVVETKG 475 (489)
Q Consensus 469 ~~pet~~ 475 (489)
.+||.+.
T Consensus 177 ~lp~~~~ 183 (382)
T PRK10091 177 WVPDIRD 183 (382)
T ss_pred hCCCCCc
Confidence 7888644
No 178
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.88 E-value=4.5e-08 Score=98.34 Aligned_cols=143 Identities=13% Similarity=0.092 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcC-ccccccccc
Q 011275 330 VGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALG-AGPVPSLLL 408 (489)
Q Consensus 330 ~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 408 (489)
..++..+|+++.|+++||+|||+.+..+.+..+++..+.....+........... ...+-+..+.+.| ..|....++
T Consensus 72 ~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~R~l~G~g~g~~~~~~~~~i 149 (432)
T PRK10406 72 GFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPAL--LLLARLFQGLSVGGEYGTSATYM 149 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHH--HHHHHHHHHhhhhhhHhhHHHHH
Confidence 3455569999999999999999999888777777666544322110000000111 1112222233332 346667799
Q ss_pred cccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHH--------HHhCCchhHHHHHHHHHHHHHHHHhhcccCCC
Q 011275 409 PEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL--------EQLGPQLLYSIFGTFCLMAVAFVKRNVVETKG 475 (489)
Q Consensus 409 ~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~ 475 (489)
+|.+|++.|+...++.......+..+++.+...+. ...||+..|.+.++..++. .+....+||++.
T Consensus 150 ~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~ 223 (432)
T PRK10406 150 SEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETSQ 223 (432)
T ss_pred HHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCch
Confidence 99999999999988876555555555444322221 2468888887766666554 344556788754
No 179
>PRK10504 putative transporter; Provisional
Probab=98.88 E-value=9.9e-08 Score=97.04 Aligned_cols=156 Identities=14% Similarity=0.016 Sum_probs=103.7
Q ss_pred HhHHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHH
Q 011275 310 YFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSV 386 (489)
Q Consensus 310 ~~~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (489)
...+.+.++.+.+. ++......++..++.++.|+++||+|||+++..+.....++....... ..... .+
T Consensus 31 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~------~~~~~--l~ 102 (471)
T PRK10504 31 TALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS------GTLNE--LL 102 (471)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh------CCHHH--HH
Confidence 34555666666653 345556667888899999999999999998877766555544433221 11111 11
Q ss_pred HHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Q 011275 387 GGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFV 466 (489)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 466 (489)
....+.+++.+. ..|....+..|.+|++.|+++.++.....+++..+++.+.+.+.+..+|.+.|.+...++.+..+..
T Consensus 103 ~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~ 181 (471)
T PRK10504 103 LARVLQGVGGAM-MVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIAT 181 (471)
T ss_pred HHHHHHHhhhHH-HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 112222222211 2345566788999999999999999999999999999888888888888888877766666665555
Q ss_pred HhhcccCC
Q 011275 467 KRNVVETK 474 (489)
Q Consensus 467 ~~~~pet~ 474 (489)
....|+.+
T Consensus 182 ~~~~~~~~ 189 (471)
T PRK10504 182 LMLMPNYT 189 (471)
T ss_pred HHhCCCcc
Confidence 55555543
No 180
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.87 E-value=5e-11 Score=120.48 Aligned_cols=156 Identities=17% Similarity=0.130 Sum_probs=91.8
Q ss_pred ccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHH----hcch------
Q 011275 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA----TTRN------ 140 (489)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~----~~~~------ 140 (489)
....+.+.++.+.+.+ ... .....+...++.++...+.||+|||+.++.+..+.+++.+..+ ..++
T Consensus 273 ~~~~~~i~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 273 FYYSPSIFENAGISNS-FLA---TLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred cccccccccccccccc-ccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344666666666544 111 1122233446677778999999999999999888877776664 1111
Q ss_pred HHHHHHHHHH-HhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHH
Q 011275 141 LIGMLLGRFV-VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (489)
Q Consensus 141 ~~~l~~~R~l-~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~ 219 (489)
...+...... .+++. +..+....+..|.+|.+.|++..++......++..+++.+...+.+..+.+........+..+
T Consensus 349 ~~~i~~~~l~~~~~~~-g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSL-GWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred cccceeeeeccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 1222221111 22222 233455678899999999999999888777777666665544444333212222222333344
Q ss_pred HHHHHhhcccCC
Q 011275 220 ILCLAMVFCAES 231 (489)
Q Consensus 220 ~~~~~~~~~pEs 231 (489)
...+..+++|||
T Consensus 428 ~~i~~~~~lpET 439 (451)
T PF00083_consen 428 AIIFVYFFLPET 439 (451)
T ss_pred HHhheeEEEeeC
Confidence 444566789999
No 181
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.87 E-value=1.2e-07 Score=93.92 Aligned_cols=155 Identities=12% Similarity=0.051 Sum_probs=99.9
Q ss_pred HHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHH
Q 011275 313 SSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGM 389 (489)
Q Consensus 313 ~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (489)
+.+.++.+.+. ++......++..++.++.|+++||+|||+.+..+.....++........ + .. .+. ...
T Consensus 32 ~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~-----~-~~-~l~-~~~ 103 (394)
T PRK11652 32 ADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH-----S-LT-VLI-AAS 103 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc-----c-HH-HHH-HHH
Confidence 44455555553 4555667788889999999999999999998877666665554433221 1 11 111 111
Q ss_pred HHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Q 011275 390 LMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRN 469 (489)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 469 (489)
.+.+++.+ ...+....+..|.+|.+.|+.+.++......++..++|.+...+.+..++...|.+.+++.++........
T Consensus 104 ~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 182 (394)
T PRK11652 104 AIQGLGTG-VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARW 182 (394)
T ss_pred HHHHhhhh-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHh
Confidence 11111111 11234445678889999999999988877777777788777666667788888887777666555545556
Q ss_pred cccCCCC
Q 011275 470 VVETKGK 476 (489)
Q Consensus 470 ~pet~~~ 476 (489)
.||++..
T Consensus 183 ~~~~~~~ 189 (394)
T PRK11652 183 MPETRPA 189 (394)
T ss_pred CCccCcc
Confidence 7886543
No 182
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.86 E-value=1.2e-08 Score=99.28 Aligned_cols=150 Identities=20% Similarity=0.164 Sum_probs=101.4
Q ss_pred HHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHH
Q 011275 314 SVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGML 390 (489)
Q Consensus 314 ~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (489)
.+.++.+.+ .++......++..++.++.|+++||+|||+++..+....+++....... .+.. ..+...+
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~~ 93 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA-----SNFW---LLLIARF 93 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH-----CCHH---HHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh-----hhHH---HHhhhcc
Confidence 344444544 3456666778899999999999999999998888877777763333321 1111 1112222
Q ss_pred HHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Q 011275 391 MFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNV 470 (489)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 470 (489)
+.+.+. ....+....+..|.+|++.|++..++......++..+++.+...+.+..++.+.|.+.++++++..++.....
T Consensus 94 l~g~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~ 172 (352)
T PF07690_consen 94 LLGIGS-GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFL 172 (352)
T ss_dssp HHHHHH-HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC
T ss_pred cccccc-ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhh
Confidence 222222 1234556678999999999999999999999999999988877766677788888888888887766433334
Q ss_pred cc
Q 011275 471 VE 472 (489)
Q Consensus 471 pe 472 (489)
+|
T Consensus 173 ~~ 174 (352)
T PF07690_consen 173 PE 174 (352)
T ss_dssp --
T ss_pred hh
Confidence 33
No 183
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.86 E-value=5.5e-08 Score=95.79 Aligned_cols=153 Identities=16% Similarity=0.153 Sum_probs=104.6
Q ss_pred HHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHH
Q 011275 313 SSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGM 389 (489)
Q Consensus 313 ~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (489)
+.+.++.+.+. +.......++..++.++.|+++||+|||+.+..+.....++........ + ... .....
T Consensus 15 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~-----~-~~~--~~~~~ 86 (377)
T PRK11102 15 PVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ-----T-IDQ--LIYMR 86 (377)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc-----c-HHH--HHHHH
Confidence 34444455543 4555667788889999999999999999998887776666655543321 1 111 11111
Q ss_pred HHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Q 011275 390 LMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRN 469 (489)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 469 (489)
.+.+.+.+ ...+....+..|.+|++.|++..++......++..+++.+...+.+..++.+.|.+.+.++++..++....
T Consensus 87 ~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 87 FLHGLAAA-AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHh
Confidence 22222211 12344556789999999999999999999999999888887777777888888888887777766665566
Q ss_pred cccCC
Q 011275 470 VVETK 474 (489)
Q Consensus 470 ~pet~ 474 (489)
+||++
T Consensus 166 ~~~~~ 170 (377)
T PRK11102 166 IPETL 170 (377)
T ss_pred CCccC
Confidence 77764
No 184
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.85 E-value=4e-08 Score=96.98 Aligned_cols=131 Identities=11% Similarity=0.024 Sum_probs=106.2
Q ss_pred chhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHh
Q 011275 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVG 152 (489)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G 152 (489)
..|.+.+|.|.+.+ +.|...+...++..++.++.|++.||+|+|+++..+.++.+++.++.+.+++.+.+++..++.|
T Consensus 227 ~~~~~~~~~g~s~~--~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 304 (382)
T PRK11128 227 FSAIYWQAAGYSAS--TIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHC 304 (382)
T ss_pred HHHHHHHHCCCCHh--HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 34445567776643 4577777777788889999999999999999999999988888888888899999999999999
Q ss_pred hhcccccccccchhcccCCcccchhhhhHHH-HHHHHHHHHHHHhhcccccCCch
Q 011275 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGW 206 (489)
Q Consensus 153 ~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~ 206 (489)
++.+...+....++.+. +++++++..+.+. ....+|..+|+.+++.+.+..++
T Consensus 305 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~ 358 (382)
T PRK11128 305 GTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA 358 (382)
T ss_pred HHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 99998888888888886 5666788888775 66677878888888888776663
No 185
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.85 E-value=9.8e-07 Score=85.17 Aligned_cols=180 Identities=16% Similarity=0.135 Sum_probs=127.2
Q ss_pred HHHHHHHHhhhhccceeeccch-hhhhh-hcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHH
Q 011275 53 VLVATLSSFLFGYHLGVVNEPL-ESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (489)
Q Consensus 53 ~~~~~l~~~~~~~~~~~~~~~~-~~i~~-~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i 130 (489)
..++|+..|+..+.= .-|.+ |.+.+ |.|++.++... -+.....-.+...-++...+.|..|-||+++++.+...+
T Consensus 7 ~~llc~~gf~~~frP--sEPfl~~yL~~~~kn~T~~qv~~-~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~ 83 (412)
T PF01770_consen 7 TLLLCLFGFFKEFRP--SEPFLTPYLTGPDKNFTEEQVNN-EIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYII 83 (412)
T ss_pred HHHHHHHHHHHhcCC--CCccchHHHcCCccCCCHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 345565556554332 11222 33333 36777665432 344555556677788999999999999999999999999
Q ss_pred HHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCc-hhHH
Q 011275 131 GASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-WWRI 209 (489)
Q Consensus 131 ~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~wr~ 209 (489)
...+.-+.++...+-+.-++-|++.+... +..+|+--..|+++--++.+....+..+|-..+.++|-.+....+ ..+.
T Consensus 84 t~~lll~~~sv~~mq~~q~~yg~~~a~ev-ay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~ 162 (412)
T PF01770_consen 84 TWLLLLFGTSVLAMQLMQFFYGLATAAEV-AYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQ 162 (412)
T ss_pred HHHHHHHHCcHHHHHHHHHHHHHHHHHHH-HHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 99999999999999999999999887654 556777777788887888888888888887777777765443221 1466
Q ss_pred HHHHHHHHHHHHHHHhhcccCChHHHH
Q 011275 210 CFWVSIVPAAILCLAMVFCAESPHWLY 236 (489)
Q Consensus 210 ~f~~~~~~~~~~~~~~~~~pEsp~~l~ 236 (489)
.+++......+.+++.+++|..++-+.
T Consensus 163 L~~isl~~~~~a~~~~~fLP~~~~S~~ 189 (412)
T PF01770_consen 163 LNYISLASVSLALLIALFLPMPKRSLF 189 (412)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccc
Confidence 666665555556666677887665444
No 186
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.84 E-value=2.7e-08 Score=97.74 Aligned_cols=153 Identities=13% Similarity=0.080 Sum_probs=102.1
Q ss_pred HHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHH
Q 011275 313 SSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGM 389 (489)
Q Consensus 313 ~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (489)
+.+.++.+.+ .++......++..++.++.|+++||+|||+.+..+.+...++..+...... .+......
T Consensus 19 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 90 (379)
T TIGR00881 19 PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS--------LWVMAALW 90 (379)
T ss_pred HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh--------HHHHHHHH
Confidence 3444444544 345666778889999999999999999999988887776666555443221 11111112
Q ss_pred HHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Q 011275 390 LMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGL-LFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 468 (489)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 468 (489)
.+.+.+.+ ...|....+..|.+|++.|++..++......++..+++. ....+.+..++...|.+.+.++++..+....
T Consensus 91 ~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 91 ALNGIFQG-MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred HHHHhhcc-ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhe
Confidence 22222111 234566678999999999999999999998898888884 4444445667888887777776666555555
Q ss_pred hcccCC
Q 011275 469 NVVETK 474 (489)
Q Consensus 469 ~~pet~ 474 (489)
..||++
T Consensus 170 ~~~~~~ 175 (379)
T TIGR00881 170 LLRDSP 175 (379)
T ss_pred eeCCCc
Confidence 566543
No 187
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.84 E-value=1.1e-07 Score=95.71 Aligned_cols=145 Identities=12% Similarity=0.042 Sum_probs=93.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCcccc
Q 011275 324 GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 403 (489)
Q Consensus 324 ~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (489)
++......++..++.++.|+++||+|||+.+..+.+..+++......... . .. ..........+.+...+.. .+.
T Consensus 64 g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~--~~~~l~~~~~l~g~~~g~~-~~~ 138 (438)
T TIGR00712 64 GFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPW-A-TS--SIAIMFVLLFLNGWFQGMG-WPP 138 (438)
T ss_pred HHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcccc-c-cc--hHHHHHHHHHHHHHHhhcc-hHH
Confidence 45666777888899999999999999999887776666665544322110 0 01 1111111112222222222 233
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCchhHHHHHHHHHHHHHHHHhhcccC
Q 011275 404 PSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE-QLGPQLLYSIFGTFCLMAVAFVKRNVVET 473 (489)
Q Consensus 404 ~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~pet 473 (489)
......|.+|++.|++++++.+....+++.+++.+.....+ ..+|+..|.+.++++++..+.....+||+
T Consensus 139 ~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 139 CGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 44567899999999999999998888888888776554443 35788888888887776655555556664
No 188
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.83 E-value=2.9e-08 Score=100.77 Aligned_cols=144 Identities=20% Similarity=0.195 Sum_probs=122.2
Q ss_pred eccchhhhhhh-cCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHH
Q 011275 70 VNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (489)
Q Consensus 70 ~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R 148 (489)
+...+|.+.++ +|. +....|++.+.+.+|..+|+++.+++.+|+++++.+..+.++++++.+..+++++.+..++.-
T Consensus 237 ~~aLlPl~a~~~l~~--~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l 314 (524)
T PF05977_consen 237 VWALLPLFARDVLGG--GASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIAL 314 (524)
T ss_pred HHHhhhHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 34456777654 444 455679999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHH
Q 011275 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (489)
Q Consensus 149 ~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~ 216 (489)
++.|++.........+.+-+..|++.|||..+++.+....+..+|.++.+.+.+..+- +..+.++++
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~-~~al~~a~~ 381 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGV-RTALLIAGA 381 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH-HHHHHHHHH
Confidence 9999998888878888899999999999999999999998888888888877776663 666665443
No 189
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.81 E-value=1.3e-07 Score=93.65 Aligned_cols=137 Identities=12% Similarity=0.042 Sum_probs=89.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCcccc
Q 011275 324 GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 403 (489)
Q Consensus 324 ~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (489)
++......+...+..++.|+++||+|||+++..+....+++......... .. ...++.+.+ .....|.
T Consensus 41 ~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~--------~~---~~r~l~G~~-~a~~~pa 108 (393)
T PRK11195 41 PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIH--------PL---LAYGLVGIG-AAAYSPA 108 (393)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHH--------HH---HHHHHHHHH-HHHHHHH
Confidence 45556677888899999999999999999998887766665544322211 01 111111111 2223466
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCC
Q 011275 404 PSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETK 474 (489)
Q Consensus 404 ~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 474 (489)
...+++|++|++.|+++.|+......++..++|.+.+.+.+.. +...+.+.+.+.++. .+..+.+||.+
T Consensus 109 ~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 109 KYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 6778999999999999999999998888888888877766643 333443333333333 33345677654
No 190
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.80 E-value=5.7e-08 Score=97.74 Aligned_cols=112 Identities=18% Similarity=0.114 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc-chHHHHHHHHHHHhhhcccccccccchhc
Q 011275 89 AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-RNLIGMLLGRFVVGTGMGLGPTVAALYVT 167 (489)
Q Consensus 89 ~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~-~~~~~l~~~R~l~G~g~g~~~~~~~~~i~ 167 (489)
..++..+...++..++.+++++++||+|||+++..+.++.+++.++..+. .+.+.+.+..++.|++.+...+....+++
T Consensus 258 ~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 337 (437)
T TIGR00792 258 LFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVA 337 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44566777788889999999999999999999999988888877766654 45666777888999999888888888888
Q ss_pred ccCC-------cccchhhhhHHHHHHHHHHHHHHHhhccc
Q 011275 168 EVSP-------PFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (489)
Q Consensus 168 e~~p-------~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~ 200 (489)
|..+ ++.+|...++++....+|..+++.+.+.+
T Consensus 338 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 338 DTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred hhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8875 45678999999988888877776665443
No 191
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.79 E-value=1e-06 Score=82.82 Aligned_cols=110 Identities=21% Similarity=0.201 Sum_probs=80.8
Q ss_pred HHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHH
Q 011275 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (489)
Q Consensus 53 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~ 132 (489)
+.+-.+....|..+...+. .+.+++|++.++ .+.+....+....+...+.|.++||+|||+..+...++.++.+
T Consensus 40 l~vY~La~~aDWLQGpY~Y----~LY~~yg~~~~q--Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~sc 113 (354)
T PF05631_consen 40 LLVYLLAMAADWLQGPYLY----ALYESYGFSEHQ--IAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSC 113 (354)
T ss_pred HHHHHHHHHHHHhhcchhH----HHHHHcCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH
Confidence 4455666666666554333 345678887554 3444555555666888899999999999999999999998888
Q ss_pred HHHHhcchHHHHHHHHHHHhhhcccccccccc-hhccc
Q 011275 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAAL-YVTEV 169 (489)
Q Consensus 133 ~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~-~i~e~ 169 (489)
+ +-..++++.++++|++.|++......+--. ++.|.
T Consensus 114 l-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh 150 (354)
T PF05631_consen 114 L-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEH 150 (354)
T ss_pred H-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 556789999999999999998887765444 35665
No 192
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.78 E-value=3.4e-08 Score=98.04 Aligned_cols=134 Identities=13% Similarity=0.045 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcc
Q 011275 89 AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (489)
Q Consensus 89 ~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e 168 (489)
..|...+...+...++.+..|++.||+|||+.+.++.++.+++..+...++|.+.+++.++++|++..........+..|
T Consensus 255 ~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 334 (396)
T TIGR00882 255 VFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITS 334 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677777777788889999999999999999999999888888887888899989999999999876665566667788
Q ss_pred cCCcccchhhhhH-HHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHH
Q 011275 169 VSPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (489)
Q Consensus 169 ~~p~~~Rg~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~ 223 (489)
..+++.|+...+. ++....+|..+++++++.+.+..| |+..|.+.++..++..+
T Consensus 335 ~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 335 QFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTL 389 (396)
T ss_pred hCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHH
Confidence 8888888876665 567888898888888888777666 68888876555544433
No 193
>PRK15075 citrate-proton symporter; Provisional
Probab=98.76 E-value=9.7e-08 Score=95.97 Aligned_cols=134 Identities=19% Similarity=0.113 Sum_probs=88.0
Q ss_pred eccchhhhhhh-cCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHH----HHhcchHHHH
Q 011275 70 VNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI----SATTRNLIGM 144 (489)
Q Consensus 70 ~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l----~~~~~~~~~l 144 (489)
+....|.+.++ +|++.+ +.++....+.++..++.++.|+++||+|||+++..+.++..+...+ ....+++..+
T Consensus 257 ~~~~~p~~l~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (434)
T PRK15075 257 ITVYTPTFGKTVLHLSAA--DSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARM 334 (434)
T ss_pred HHHHHHHHHHHhcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHH
Confidence 44456766654 677644 4466777777888899999999999999999987765443332211 1123344444
Q ss_pred HHHHHHHhhhcccccccccchhcccCCcccchhhhhHH-HHHHHHHHHHHHHhhcccccCCc
Q 011275 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFI-QIATCLGLMGSLLIGIPVKEIAG 205 (489)
Q Consensus 145 ~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~-~~~~~~G~~~~~~~~~~~~~~~~ 205 (489)
.+..++.|++.|...+....++.|.+|+++|+...++. +.+..++..++|.+.+.+.+..+
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 335 LAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 45556666666665555667889999999999999885 44444434445655555555444
No 194
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.76 E-value=4.8e-08 Score=92.90 Aligned_cols=170 Identities=15% Similarity=0.145 Sum_probs=126.1
Q ss_pred HHHHhhhhccceeeccchhhhhh-hcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHH
Q 011275 57 TLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (489)
Q Consensus 57 ~l~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~ 135 (489)
.-..+.||.+.-+ ... ..+.+ ++|++.. +..+..-...+..++|+++.|+|.||+|-|+++..++++..+.++..
T Consensus 260 A~~~~~DGv~til-~~~-~~fg~~~~gls~~--~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~ 335 (438)
T COG2270 260 ARFFYIDGVNTIL-AMG-GVFGAADLGLSST--ELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYL 335 (438)
T ss_pred HHHHHHhhHHHHH-HHH-HHHHHHHcCccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHH
Confidence 3334556654422 111 22444 8888644 45566667777888999999999999999999999999999988888
Q ss_pred HhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHH
Q 011275 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (489)
Q Consensus 136 ~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~ 215 (489)
-+...-..+.++-.+.|...|+..+.+..|.++..|+++-+++.++|++..-.+...||.+-..+.+..+.-|.-+....
T Consensus 336 ~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~ 415 (438)
T COG2270 336 IFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSII 415 (438)
T ss_pred HHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHH
Confidence 77777777778889999999999999999999999999999999999999998888888876655554444566555433
Q ss_pred HHHHHHHHHhhcccC
Q 011275 216 VPAAILCLAMVFCAE 230 (489)
Q Consensus 216 ~~~~~~~~~~~~~pE 230 (489)
+...+-++....+|+
T Consensus 416 vll~iGl~~L~~v~~ 430 (438)
T COG2270 416 VLLLIGLLLLLRVKV 430 (438)
T ss_pred HHHHhhHhhEEeecC
Confidence 333333333444444
No 195
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.74 E-value=4.7e-08 Score=91.21 Aligned_cols=143 Identities=16% Similarity=0.140 Sum_probs=92.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccc
Q 011275 323 SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGP 402 (489)
Q Consensus 323 ~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (489)
.|.....+++++++.+...|.++||+|||+++.++.++..+...+...... +......-+..+..-|.-.
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~----------F~afv~aR~l~Gi~kgnl~ 139 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN----------FAAFVLARFLGGIFKGNLS 139 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHhhhhccCchH
Confidence 456667788999999999999999999999998887777765444332211 1101111222222233334
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCch-hHHHHHHH-HHHH-HHHHHhhcccCCC
Q 011275 403 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE---QLGPQL-LYSIFGTF-CLMA-VAFVKRNVVETKG 475 (489)
Q Consensus 403 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~-~~~~~~~~-~~~~-~~~~~~~~pet~~ 475 (489)
+..++++|+++++.|+.+++.......+|..++|++.+++.. ..|..+ ++-.+.++ .... ......++|||-.
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~ 218 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP 218 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 566799999999999999999999988888889988766544 233222 22122222 2222 3344567999944
No 196
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.72 E-value=2.3e-07 Score=94.07 Aligned_cols=129 Identities=12% Similarity=0.055 Sum_probs=91.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhh-cCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcC-cc
Q 011275 324 GLANVFVGIANLLGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALG-AG 401 (489)
Q Consensus 324 ~~~~~~~~i~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 401 (489)
+.......++..++.+++|+++|| +|||+++..+....+++..+..... + .........+ .+.+.| ..
T Consensus 51 g~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~-----~---~~~~~~~~~l--~g~g~g~~~ 120 (475)
T TIGR00924 51 FIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSI-----Y---PDLIFYGLGT--IAVGSGLFK 120 (475)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcc-----c---HhHHHHHHHH--HHhcccccc
Confidence 455666778889999999999999 8999999888877776665443221 1 1111111222 222222 34
Q ss_pred ccccccccccCCchh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Q 011275 402 PVPSLLLPEIFPSRI---RAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMA 462 (489)
Q Consensus 402 ~~~~~~~~e~~p~~~---r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 462 (489)
|....+.+|.+|++. |+++.++.....++++.+++.+.+.+.+..++...|.+.++.++++
T Consensus 121 ~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~ 184 (475)
T TIGR00924 121 ANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIG 184 (475)
T ss_pred CCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 566678889998754 8999999999999999999999888888888888887766554444
No 197
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.72 E-value=5e-07 Score=91.78 Aligned_cols=121 Identities=12% Similarity=0.066 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHhh-cCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccc
Q 011275 330 VGIANLLGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLL 408 (489)
Q Consensus 330 ~~i~~~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (489)
.........+++|+++|| +|||+++..+.+...++.......... .. .......+.+++ .....|....+.
T Consensus 59 ~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~-----~~--ll~~~~~l~~ig-~g~~~~~~~~li 130 (489)
T PRK10207 59 FAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLK-----PD--LIFIALGTIAVG-NGLFKANPASLL 130 (489)
T ss_pred HHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccc-----hh--HHHHHHHHHHhc-cccccCCHHHHH
Confidence 334445556789999999 999999999988887776655432210 11 111112222111 112345667789
Q ss_pred cccCCch--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Q 011275 409 PEIFPSR--IRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTF 458 (489)
Q Consensus 409 ~e~~p~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 458 (489)
.|.||++ .|+.+.++.....++++.++|.+.+.+.+..||++.|.+.++.
T Consensus 131 ~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~ 182 (489)
T PRK10207 131 SKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAG 182 (489)
T ss_pred HHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHH
Confidence 9999887 4578899999999999999998888888888988888775443
No 198
>PRK11043 putative transporter; Provisional
Probab=98.72 E-value=4.7e-07 Score=89.99 Aligned_cols=146 Identities=17% Similarity=0.146 Sum_probs=94.7
Q ss_pred HHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHH
Q 011275 314 SVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGML 390 (489)
Q Consensus 314 ~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (489)
.+.++.+.+. +.......++..++.++.|+++||+|||+.+..+.....++........ + ... + .....
T Consensus 31 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-----~-~~~-l-~~~~~ 102 (401)
T PRK11043 31 AIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE-----S-AAQ-L-LVLRF 102 (401)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc-----C-HHH-H-HHHHH
Confidence 3445555543 4555666788889999999999999999998877666555544433221 1 111 1 11111
Q ss_pred HHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Q 011275 391 MFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKR 468 (489)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 468 (489)
+.+.+.. ...+....+..|.+|++.++...+.......++..++|.+...+.+..++...|.+.+++.++..+....
T Consensus 103 l~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 103 VQAVGVC-SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHhhhH-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 2111111 1122334567899999999999998888888888888888877777788888887777766665544433
No 199
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.71 E-value=9.9e-06 Score=79.63 Aligned_cols=102 Identities=14% Similarity=-0.050 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcc
Q 011275 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF 173 (489)
Q Consensus 94 ~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~ 173 (489)
.++....+.+..++.+++.|+.|.|..+.++..++.......- -.|-+-+.+.-.+.|+|.+..+.....|++|.++++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl-~~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFL-FPNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHH-hcchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 5666677789999999999999999999999998877655553 445666888999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHh
Q 011275 174 VRGTYGAFIQIATCLGLMGSLLI 196 (489)
Q Consensus 174 ~Rg~~~~~~~~~~~~G~~~~~~~ 196 (489)
.+.+..++.-.....+.++|.+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHh
Confidence 99999988766666666655443
No 200
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.70 E-value=3.7e-06 Score=83.61 Aligned_cols=119 Identities=10% Similarity=0.047 Sum_probs=73.1
Q ss_pred hcCCCcc---hHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHH
Q 011275 318 SAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVL 394 (489)
Q Consensus 318 ~~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (489)
..+++.. +......++..++.+..|++.||+|.|++..++.+...+............. ++....+.+. .+.++
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~-~s~~~lli~r--~l~Gi 140 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPN-TPFGIFIVIA--LLCGF 140 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccC-CCHHHHHHHH--HHHHH
Confidence 3455543 3444555666677788899999999999888877766665554443211111 1121211111 11111
Q ss_pred HHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 011275 395 TFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLR 441 (489)
Q Consensus 395 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 441 (489)
..+..+.....+++.||+++||++.|+....++++..+.+.+.+.
T Consensus 141 --gg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~ 185 (462)
T PRK15034 141 --AGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPL 185 (462)
T ss_pred --HHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 112233445578899999999999999988888888776665544
No 201
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.70 E-value=1.6e-07 Score=95.30 Aligned_cols=143 Identities=15% Similarity=0.068 Sum_probs=97.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccc
Q 011275 323 SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGP 402 (489)
Q Consensus 323 ~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (489)
.+.......++..++.+++|++.||+|||+.+..+.+...++..+....... . . ...+..-++.+++ .....|
T Consensus 78 ~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~---~-~--~~l~~~r~~~G~~-~~~~~~ 150 (465)
T TIGR00894 78 QGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG---G-I--ALVVFCRVIQGLA-QGSVSP 150 (465)
T ss_pred hhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHc---C-c--hHHHHHHHHHHHh-cccchh
Confidence 3556666778889999999999999999998887766655554443222110 0 1 1111111122221 112345
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHhhccc
Q 011275 403 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL-GPQLLYSIFGTFCLMAVAFVKRNVVE 472 (489)
Q Consensus 403 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~pe 472 (489)
....+.+|.+|++.|++..++......++..+++.+...+.+.. ++...|.+.+++.++..+..+...||
T Consensus 151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 151 ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 66678999999999999999999999999999998888777774 88888888888776665554444444
No 202
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.68 E-value=6.6e-07 Score=91.87 Aligned_cols=157 Identities=20% Similarity=0.140 Sum_probs=93.5
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchH--------
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNL-------- 141 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~-------- 141 (489)
.....+++.+..+.+.+. .+......+...++..+...+.||+|||+.++.+...+.++.++.+.....
T Consensus 314 ~~~Y~~~if~~~g~~~~~---~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~ 390 (513)
T KOG0254|consen 314 VFYYSTTIFKSAGLKSDT---FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSS 390 (513)
T ss_pred EEeehHHHHHhcCCCCch---HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 444556777777776543 233333444455777778999999999999999999999998887643211
Q ss_pred ---HH---HHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHH-H
Q 011275 142 ---IG---MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV-S 214 (489)
Q Consensus 142 ---~~---l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~-~ 214 (489)
.. ....-++..+..| ..++...+.+|.+|.+.|++..++......+....-...........+ +...|.. .
T Consensus 391 ~~~~~~~~~~~~~~v~~f~~g-~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~-~~~~f~~f~ 468 (513)
T KOG0254|consen 391 KGAGWLAIVFLCLFIFSFAIG-WGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG-IGGTFGYFG 468 (513)
T ss_pred cchhHHHHHHHHHHHHHHhcc-cccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchHHHHH
Confidence 11 1223333333333 334455788999999999999888766555553322222122211111 1223322 2
Q ss_pred HHHHHHHH-HHhhcccCC
Q 011275 215 IVPAAILC-LAMVFCAES 231 (489)
Q Consensus 215 ~~~~~~~~-~~~~~~pEs 231 (489)
++..+... +..+++|||
T Consensus 469 ~~~~~~~~~fv~~~~pET 486 (513)
T KOG0254|consen 469 GICLLSLIIFVFFFVPET 486 (513)
T ss_pred HHHHHHHHHHheEEcccC
Confidence 33333333 566789998
No 203
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.68 E-value=1.3e-07 Score=87.92 Aligned_cols=99 Identities=22% Similarity=0.212 Sum_probs=80.3
Q ss_pred HHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhh
Q 011275 100 GAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYG 179 (489)
Q Consensus 100 g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~ 179 (489)
.-.-|.++.+++.||+|||+.+..+.++++++.++...+.+-....+.-|..-+...+.+.+.+.|..|.+|...|+...
T Consensus 393 aefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgv 472 (528)
T KOG0253|consen 393 AEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGV 472 (528)
T ss_pred hhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcch
Confidence 34568899999999999999999999999999998877665444443334444445556667888999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhc
Q 011275 180 AFIQIATCLGLMGSLLIGI 198 (489)
Q Consensus 180 ~~~~~~~~~G~~~~~~~~~ 198 (489)
+.-....-+|.++.|+++.
T Consensus 473 GtcSsmaRIggI~~p~iA~ 491 (528)
T KOG0253|consen 473 GTCSSMARIGGIFSPVIAM 491 (528)
T ss_pred hhhhhHHhhhhhhhhHHHH
Confidence 9999999999999998873
No 204
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.68 E-value=9.1e-07 Score=90.32 Aligned_cols=118 Identities=19% Similarity=0.134 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhh-cCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCc
Q 011275 336 LGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPS 414 (489)
Q Consensus 336 ~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 414 (489)
...+++|+++|| +|||+.+..+.+...++..+..... ... . .......+.+++.+. ..|....+..|.+|+
T Consensus 72 ~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~-----~~~-~-~l~~~~~l~gig~g~-~~~~~~~l~~~~f~~ 143 (500)
T PRK09584 72 GLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG-----HDA-G-IVYMGMATIAVGNGL-FKANPSSLLSTCYEK 143 (500)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc-----ccH-H-HHHHHHHHHHHhhhc-ccCCHHHHHHHhcCC
Confidence 334689999999 5999998888777776654443221 111 1 111112222222221 235555688999986
Q ss_pred hh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Q 011275 415 RI--RAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLM 461 (489)
Q Consensus 415 ~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 461 (489)
+. |..+.++.+...++++.++|.+.+.+.+..|+.+.|.+.++..++
T Consensus 144 ~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 144 DDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred CchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 43 456788888889999999999988888888988888776653333
No 205
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.67 E-value=6.3e-07 Score=101.33 Aligned_cols=143 Identities=14% Similarity=0.095 Sum_probs=87.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccc
Q 011275 325 LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVP 404 (489)
Q Consensus 325 ~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (489)
+......+..++.++++|+++||+|||+++........+.......... . .. .+..+...++.+++ .....|..
T Consensus 56 l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~--~-~s--~~~l~~~~~l~gi~-~a~~~p~~ 129 (1140)
T PRK06814 56 LAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFH--L-NS--VPLLFAALFLMGIH-SALFGPIK 129 (1140)
T ss_pred HHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHH--H-hh--HHHHHHHHHHHHHH-HHhhchHH
Confidence 3445566778888999999999999999754322221111111111100 0 11 11111112222222 22345777
Q ss_pred cccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCC
Q 011275 405 SLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETK 474 (489)
Q Consensus 405 ~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~ 474 (489)
..++.|++|++.|+.++|+..+...++..++|.+.+.+....++...|...+.+.+++ +++...+||++
T Consensus 130 ~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 198 (1140)
T PRK06814 130 YSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKTG 198 (1140)
T ss_pred HHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCCC
Confidence 8899999999999999999999999999999998888877777777763333333333 33334455543
No 206
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.67 E-value=9.1e-08 Score=93.43 Aligned_cols=135 Identities=17% Similarity=0.068 Sum_probs=97.8
Q ss_pred ccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcc-hhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHH
Q 011275 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (489)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~-GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~ 149 (489)
...+|.+.++.|.+. .+.+...+.+.++..++.++.|+++||+ +||+.+..+.++.+++.++..+..+..... .-+
T Consensus 217 ~~~lp~~~~~~g~~~--~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 293 (355)
T TIGR00896 217 IGWLPAILISHGASA--ATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WAL 293 (355)
T ss_pred HHHHHHHHHHcCCCH--HHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHH
Confidence 345677777777653 3567888899999999999999999999 567777777777777776666655433322 346
Q ss_pred HHhhhcccccccccchhcccCC-cccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhH
Q 011275 150 VVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (489)
Q Consensus 150 l~G~g~g~~~~~~~~~i~e~~p-~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr 208 (489)
+.|++.|...+.....+.+..+ +++++...++.+....+|..++|.+.+.+.++.+.|.
T Consensus 294 l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 294 VLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 7899998888876666665554 5667888888777777777778877776666555443
No 207
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.66 E-value=2.4e-07 Score=87.79 Aligned_cols=157 Identities=28% Similarity=0.376 Sum_probs=117.4
Q ss_pred hhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcch-
Q 011275 62 LFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRN- 140 (489)
Q Consensus 62 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~- 140 (489)
....+........+.+..+++.+......++..+.+.++..+++++.|.++||+|||+.+..+.....++.++.++..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (338)
T COG0477 13 LLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNV 92 (338)
T ss_pred HHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccc
Confidence 3335555566677777777654321024578899999999999999999999999998888888776666777777776
Q ss_pred -HHHHHHHHHHHhhhcccccccccchhcccCCc-ccchhhhhHHHH-HHHHHHHHHHHhhcccccC-CchhHHHHHHHHH
Q 011275 141 -LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQI-ATCLGLMGSLLIGIPVKEI-AGWWRICFWVSIV 216 (489)
Q Consensus 141 -~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~-~~Rg~~~~~~~~-~~~~G~~~~~~~~~~~~~~-~~~wr~~f~~~~~ 216 (489)
...+++.|+++|++.|...+....++.|+.|+ ++|+...+.... ...+|...+++++..+... ...||+.|.....
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAAL 172 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 88899999999999999999999999999998 678888888877 5777777776655443322 1227886665443
Q ss_pred HH
Q 011275 217 PA 218 (489)
Q Consensus 217 ~~ 218 (489)
..
T Consensus 173 ~~ 174 (338)
T COG0477 173 LG 174 (338)
T ss_pred HH
Confidence 33
No 208
>PTZ00207 hypothetical protein; Provisional
Probab=98.66 E-value=3.3e-06 Score=86.35 Aligned_cols=153 Identities=15% Similarity=0.134 Sum_probs=87.2
Q ss_pred HHHHhHHHHHHhcCCCcchHHHHHHHHHH--HHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHH
Q 011275 307 AIFYFSSSVFKSAGLSSGLANVFVGIANL--LGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYL 384 (489)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (489)
....+.+.+.+..+.+.........++.. ...+..|++.||+|+|+++.++.+...++.++............... +
T Consensus 45 ~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~-l 123 (591)
T PTZ00207 45 AFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVR-L 123 (591)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHH-H
Confidence 33455666667777765443333333322 34456899999999999999988888887766554322111111111 1
Q ss_pred HHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Q 011275 385 SVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVA 464 (489)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 464 (489)
.+ ..++.+.+.+. ..+.....+.+.|| +.||++.|+......+++.+.+.+...+.. .++...+.+.+++.++..+
T Consensus 124 ~l-~r~l~G~G~~~-~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 124 SV-YNGLMTLGCML-FDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGI 199 (591)
T ss_pred HH-HHHHHHHHHHH-HHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHH
Confidence 11 11111111111 11222335678887 789999999999999988876655544433 2344556666665555443
No 209
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.63 E-value=2.1e-07 Score=105.40 Aligned_cols=127 Identities=18% Similarity=0.142 Sum_probs=106.0
Q ss_pred chhhh-hhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHH
Q 011275 73 PLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVV 151 (489)
Q Consensus 73 ~~~~i-~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~ 151 (489)
.+|.+ .+++|.+.. ...+++.+...+|.++|+++.|+++||+++|+++.++.++.+++.++..+..+.+.+++.-++.
T Consensus 254 ~~~~~~~~~~g~s~~-~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1146)
T PRK08633 254 NFPAYAKEVLGLDNT-FQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLF 332 (1146)
T ss_pred hhHHHHHHHhCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 34444 445666543 1457888889999999999999999999999999888888888888888888888888899999
Q ss_pred hhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhccc
Q 011275 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (489)
Q Consensus 152 G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~ 200 (489)
|++.+...+....++.+..|++.||++.++.++...+|..+++.++..+
T Consensus 333 g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 333 GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888889999999999999999999988888887777666544
No 210
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.62 E-value=1.8e-06 Score=88.06 Aligned_cols=157 Identities=16% Similarity=0.156 Sum_probs=96.6
Q ss_pred hHHHHHHhcCCCcchHHHHHHHHHH-HHHHHHHHHHhhc-----CCchh-HHHhhHHHHHHHHHHHHHhhccCCCchhhH
Q 011275 311 FSSSVFKSAGLSSGLANVFVGIANL-LGSVVAMVLMDKL-----GRKAL-LQWSFFSMAVSMAIQVAASSSYIPGSASLY 383 (489)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~i~~~-~g~~~~g~l~dr~-----grr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (489)
..+..+++.|.+.........++.. ++.++.+.++||+ |||+. +..+.+...++........ +.....+
T Consensus 34 ~l~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~----~~~~l~~ 109 (491)
T PRK11010 34 TLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLE----PGTQLRW 109 (491)
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcC----CcchHHH
Confidence 3455566677765544333222222 6789999999999 99886 4444444444433332221 1111111
Q ss_pred HHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCchhHHHHHHHHHHH
Q 011275 384 LSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE-QLGPQLLYSIFGTFCLMA 462 (489)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~ 462 (489)
+.+. .++.... .....+....+..|.+|+++|+++.++.....+++..+++.+...+.+ ..||...|.+.+++.++.
T Consensus 110 l~~~-~~l~~~~-~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~ 187 (491)
T PRK11010 110 LAAL-AVVIAFC-SASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPC 187 (491)
T ss_pred HHHH-HHHHHHH-HHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHH
Confidence 1111 1111222 223344556789999999999999999999999998888887777766 468888888888776666
Q ss_pred HHHHHhhcccCC
Q 011275 463 VAFVKRNVVETK 474 (489)
Q Consensus 463 ~~~~~~~~pet~ 474 (489)
.+... ..||++
T Consensus 188 ~l~~~-~~~e~~ 198 (491)
T PRK11010 188 IIATL-LAPEPT 198 (491)
T ss_pred HHHHH-hcCCCc
Confidence 44433 467764
No 211
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.62 E-value=3.2e-07 Score=90.81 Aligned_cols=144 Identities=15% Similarity=0.004 Sum_probs=101.1
Q ss_pred hhhhhhhcCCCCchhHHHHHHHHHH-HHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHh------cchHHHHHH
Q 011275 74 LESISLDLGFNGNTLAEGLVVSMCL-GGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT------TRNLIGMLL 146 (489)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s~~~-~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~------~~~~~~l~~ 146 (489)
.+.+.+|.|++.+ +.|+...... .+..+|.++.|++.||+|+|+++..+.++.++....... ..+...+..
T Consensus 231 ~~~~l~~~G~s~~--~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (390)
T TIGR02718 231 SKLYLVDAGWPLE--WIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWS 308 (390)
T ss_pred hhHHHHhcCCCHH--HHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHH
Confidence 3445667787654 4466666554 466788999999999999999998776655333222211 233444455
Q ss_pred HHHHHhhhcccccccccchhcccCCc-ccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHH
Q 011275 147 GRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (489)
Q Consensus 147 ~R~l~G~g~g~~~~~~~~~i~e~~p~-~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~ 220 (489)
.-.+.+++.|...+.....+.+..++ +++|+..++.+....+|..+++.+++.+.+..| ++..|+......++
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~ 382 (390)
T TIGR02718 309 CSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVL 382 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHH
Confidence 55666777777777777777777766 889999999999999999999999888776656 57888776544443
No 212
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.62 E-value=1.6e-06 Score=86.31 Aligned_cols=156 Identities=13% Similarity=0.144 Sum_probs=99.4
Q ss_pred HHHHHHhcCCC---cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHH
Q 011275 312 SSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 388 (489)
Q Consensus 312 ~~~~~~~~~~~---~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (489)
.+.+.++.+.+ .++......++..++++..+++.||+|||+.+..+....+++..+...... ......+ +..
T Consensus 26 ~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~---~~~~~~~--l~~ 100 (410)
T TIGR00885 26 VPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE---IMNYTLF--LVG 100 (410)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh---hccHHHH--HHH
Confidence 34445555554 356677788999999999999999999999999888877776655332211 0111111 111
Q ss_pred HHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------
Q 011275 389 MLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ----------------------- 445 (489)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 445 (489)
.++.+.+.+.. .+....+..|+.|++.|++..++.+....++..+++.+...+...
T Consensus 101 ~~l~G~g~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (410)
T TIGR00885 101 LFILTAGLGFL-ETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKH 179 (410)
T ss_pred HHHHHhhHHHH-HhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHH
Confidence 12222222211 122334677888999999999999999999999988876655321
Q ss_pred ---hCCchhHHHHHHHHHHHHHHH-HhhcccC
Q 011275 446 ---LGPQLLYSIFGTFCLMAVAFV-KRNVVET 473 (489)
Q Consensus 446 ---~g~~~~~~~~~~~~~~~~~~~-~~~~pet 473 (489)
.+++..|.+.+++.++..++. ....||.
T Consensus 180 ~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~ 211 (410)
T TIGR00885 180 SDLASVQTPYMIIGAVVLAVALLIMLTKMPAL 211 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 246677877777666554433 2346663
No 213
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.60 E-value=2.2e-07 Score=93.93 Aligned_cols=171 Identities=15% Similarity=0.170 Sum_probs=137.3
Q ss_pred HHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcch--hhHHHHHhHHHHHHHHHH
Q 011275 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG--RRRAFQLCALPMIIGASI 134 (489)
Q Consensus 57 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~G--Rr~~~~~~~~~~~i~~~l 134 (489)
.++..+...........+|...++.+.+.+ +.....+...+...+|-++.|+++|+.. ++.++.+++++.+++...
T Consensus 304 ~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~--~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~ 381 (509)
T KOG2504|consen 304 ALSNLFAYLGFNVPFVYLPSYAKSLGLSSN--DAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLF 381 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCChh--hhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHH
Confidence 333333333333455567888888776544 5578899999999999999999999988 667778888888888999
Q ss_pred HHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHH
Q 011275 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (489)
Q Consensus 135 ~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~ 214 (489)
+.+++++..+...-.+.|++.|.........+.|+.+.++-..+.++......++.+.|+++.+.+.+..+.|...|+.+
T Consensus 382 ~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~ 461 (509)
T KOG2504|consen 382 LPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFC 461 (509)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhc
Confidence 99999999999999999999999988888899999999999999999999999999998888888777776678888876
Q ss_pred HHHHHHHHHHhhccc
Q 011275 215 IVPAAILCLAMVFCA 229 (489)
Q Consensus 215 ~~~~~~~~~~~~~~p 229 (489)
.+..++..+.++..|
T Consensus 462 g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 462 GLCFLLSAVLLLILR 476 (509)
T ss_pred ChHHHHHHHHHHHhH
Confidence 555555554544444
No 214
>PRK09848 glucuronide transporter; Provisional
Probab=98.60 E-value=4.8e-07 Score=91.39 Aligned_cols=107 Identities=18% Similarity=0.105 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcc--hHHHHHHHHHHHhhhcccccccccchhcc
Q 011275 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (489)
Q Consensus 91 ~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~--~~~~l~~~R~l~G~g~g~~~~~~~~~i~e 168 (489)
++......++..++.++.++++||+|+|+++..+.++..++.++..+.+ +++.+.+.-++.|+|.+...+......+|
T Consensus 267 ~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~ 346 (448)
T PRK09848 267 VLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEAD 346 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3434444567788999999999999999999999988888777766643 56667777889999999988888888899
Q ss_pred cCCcc-------cchhhhhHHHHHHHHHHHHHHHhh
Q 011275 169 VSPPF-------VRGTYGAFIQIATCLGLMGSLLIG 197 (489)
Q Consensus 169 ~~p~~-------~Rg~~~~~~~~~~~~G~~~~~~~~ 197 (489)
..|.+ ++|...+.++....+|..+++.+.
T Consensus 347 ~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~ 382 (448)
T PRK09848 347 TVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIP 382 (448)
T ss_pred hhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 88764 358888999888888876665554
No 215
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.57 E-value=1.8e-06 Score=84.29 Aligned_cols=156 Identities=15% Similarity=0.053 Sum_probs=92.2
Q ss_pred HHHHHHhcCCCcchHHHHH--HHHHHHHHHHHHHHHhhc-----CCchhH-HHhhHHHHHHHHHHHHHhhccCCCchhhH
Q 011275 312 SSSVFKSAGLSSGLANVFV--GIANLLGSVVAMVLMDKL-----GRKALL-QWSFFSMAVSMAIQVAASSSYIPGSASLY 383 (489)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~--~i~~~~g~~~~g~l~dr~-----grr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (489)
.+.+.++.|.+........ .+...+ .++.|+++||+ |||+.+ ..+.+..+++...+... .+....+
T Consensus 11 ~~~~~~~~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~-----~~~~~l~ 84 (356)
T TIGR00901 11 LPYWLRSKNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL-----VPSTDLP 84 (356)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC-----CcchhHH
Confidence 3445566666544333332 233333 78999999998 888874 34444444433333211 1111111
Q ss_pred HHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CchhHHHH
Q 011275 384 LSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG--------PQLLYSIF 455 (489)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------~~~~~~~~ 455 (489)
......++.. .......+....+.+|.+|++.|+.+.++......++..+++.+...+....+ |...|.+.
T Consensus 85 ~l~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ 163 (356)
T TIGR00901 85 LLAGLAFLIA-FFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWT 163 (356)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHH
Confidence 1111111111 11222244556688999999999999999998888888888887777666666 77788777
Q ss_pred HHHHHHHHHHHHhhcccCC
Q 011275 456 GTFCLMAVAFVKRNVVETK 474 (489)
Q Consensus 456 ~~~~~~~~~~~~~~~pet~ 474 (489)
+++.++..+...+..||.+
T Consensus 164 ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 164 ALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred HHHHHHHHHHHHHhccCCC
Confidence 7766665555444567753
No 216
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.55 E-value=8.6e-07 Score=84.57 Aligned_cols=137 Identities=12% Similarity=0.106 Sum_probs=97.5
Q ss_pred ccchhhhhhh---cCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHH
Q 011275 71 NEPLESISLD---LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLG 147 (489)
Q Consensus 71 ~~~~~~i~~~---~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~ 147 (489)
+...+.+.+| +|.+ +.+.++..+.+..++.+|.++.+++.||+|+|+++..+.++.+++.++....++... ..+
T Consensus 160 ~~w~~~yl~~~~~~g~s--~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~ 236 (310)
T TIGR01272 160 GSFLVNFLSDPHALGLP--EDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWF 236 (310)
T ss_pred HHHHHHHHHhcccCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHH
Confidence 3344555543 3554 445678899999999999999999999999999998888887777766655554332 234
Q ss_pred HHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHH
Q 011275 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (489)
Q Consensus 148 R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~ 213 (489)
=++.|++.+..+|.......+..|++ .+...++..+ ..+|..+.|++.+.+.+..+ -+..|++
T Consensus 237 ~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~~~-~~~Gg~i~P~l~G~lad~~g-~~~a~~v 299 (310)
T TIGR01272 237 VLALGLFNSIMFPTIFSLALNALGRH-TSQGSGILCL-AIVGGAIVPLLQGSLADCLG-IQLAFAL 299 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHHHH-HHhcchHHHHHHHHHHHhcc-chHHHHH
Confidence 55889999999999888888887765 4556666544 44666666665555655555 4666664
No 217
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.50 E-value=2.2e-06 Score=87.17 Aligned_cols=141 Identities=16% Similarity=0.210 Sum_probs=86.4
Q ss_pred HHHHHhcCCCc--chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHH
Q 011275 313 SSVFKSAGLSS--GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGML 390 (489)
Q Consensus 313 ~~~~~~~~~~~--~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (489)
+++....|-+. .+......++..++.++.|+++|.+|||..++.+.++..++.+..... +.... .+.+..
T Consensus 68 ~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA------~~~~~--~iag~~ 139 (599)
T PF06609_consen 68 PYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA------QNMNT--FIAGMV 139 (599)
T ss_pred HHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC------CcHHH--HHHHHH
Confidence 34555544432 356666778888899999999999999999888877777766554322 11222 223344
Q ss_pred HHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Q 011275 391 MFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAV 463 (489)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 463 (489)
+++++. |...+....++|+.|.+.|..+.++.....-....+++.+...+....+|+|.|.+..+...+++
T Consensus 140 l~Gvga--G~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~ 210 (599)
T PF06609_consen 140 LYGVGA--GVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIAL 210 (599)
T ss_pred HHHHhh--HHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHH
Confidence 443332 22234445689999999998887766543222222344443333334578888887777655544
No 218
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.49 E-value=4.2e-07 Score=87.07 Aligned_cols=179 Identities=16% Similarity=0.057 Sum_probs=119.4
Q ss_pred HHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHH------H-HHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHh
Q 011275 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAE------G-LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLC 124 (489)
Q Consensus 52 ~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------~-~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~ 124 (489)
+++..++..|+......-.+.....+.+..++..++... . +-.-+...++..|..+...+.|++|||+..+.+
T Consensus 305 ~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~G 384 (538)
T KOG0252|consen 305 HLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMG 384 (538)
T ss_pred HHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhh
Confidence 345556555554433333444556677766664433221 0 111123445556788888999999999999999
Q ss_pred HHHHHHHHHHHHhcchH----HHHHHH-HHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcc
Q 011275 125 ALPMIIGASISATTRNL----IGMLLG-RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (489)
Q Consensus 125 ~~~~~i~~~l~~~~~~~----~~l~~~-R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~ 199 (489)
.+++++..+..+...|. ..+++. -+.+=++.-+.-.....+.+|.+|.+.||..-++...+.-+|.+++...-.+
T Consensus 385 F~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~ 464 (538)
T KOG0252|consen 385 FFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLY 464 (538)
T ss_pred HHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhH
Confidence 99999999888887661 112222 2222233333444556678999999999999999988888888888877666
Q ss_pred ccc-----CCchhHHHHHHHHHHHHHHHHHhhcccCC
Q 011275 200 VKE-----IAGWWRICFWVSIVPAAILCLAMVFCAES 231 (489)
Q Consensus 200 ~~~-----~~~~wr~~f~~~~~~~~~~~~~~~~~pEs 231 (489)
+.+ ..+ -|+.|++.....++..+..+++|||
T Consensus 465 ~t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~l~pEt 500 (538)
T KOG0252|consen 465 LTDHNYPPNIG-VRNVFIILAGCMLLGILFTLLIPET 500 (538)
T ss_pred hhhccCCcccc-chHHHHHHHHHHHHhHheeEEeecc
Confidence 665 333 5888888766666666777889998
No 219
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.48 E-value=2.7e-07 Score=86.79 Aligned_cols=148 Identities=16% Similarity=0.107 Sum_probs=112.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCc
Q 011275 321 LSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGA 400 (489)
Q Consensus 321 ~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (489)
...|+.+...++.+++.+++.|.+.||+|+|..+++|+..+..+.+++.+..+.. +.+..-.+.+++.+...
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~--------~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYP--------MLFVARSLQGVGSAFAD 177 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhH--------HHHHHHHHhhhhHHHHH
Confidence 3467788888899999999999999999999999999998888887766543321 11112222333322221
Q ss_pred cccccccccccCCchh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011275 401 GPVPSLLLPEIFPSRI-RAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKS 477 (489)
Q Consensus 401 ~~~~~~~~~e~~p~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~ 477 (489)
.....+.++.||.+. |++++|+...+..+|..++|.+.+.+++..|....|.+++.++++...+....++.+|..+
T Consensus 178 -tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 178 -TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred -hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 123347889999877 7999999999999999999998889999999999999999999888776666666555444
No 220
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.48 E-value=2.7e-06 Score=77.24 Aligned_cols=154 Identities=17% Similarity=0.184 Sum_probs=106.0
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc-------chHH
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-------RNLI 142 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~-------~~~~ 142 (489)
++..-|++.+.+|++.++. ..+...-.+|..+| ++.|.+.|++|+|.++.++.+...+|..+...+ .+++
T Consensus 21 Fs~yS~~Lk~~l~~sq~~l--~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~ 97 (250)
T PF06813_consen 21 FSAYSPQLKSRLGYSQSQL--NTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVW 97 (250)
T ss_pred hhhhhHHHHHHhCCCHHHH--HHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchH
Confidence 4445577888989876554 46677777787775 888999999999999999999888887665432 4677
Q ss_pred HHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHH-HHHHHhhcccccCCchhHHHHHHHHHHHHHH
Q 011275 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGL-MGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (489)
Q Consensus 143 ~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~ 221 (489)
.+.+.-++.|.+.+.....+.....+.||. .||.+.++.-....++. +...+......+ +. -+..+.++..+.++.
T Consensus 98 ~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~-~~fll~la~~~~~v~ 174 (250)
T PF06813_consen 98 LMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DP-SSFLLFLAVLPAVVC 174 (250)
T ss_pred HHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC-Ch-HHHHHHHHHHHHHHH
Confidence 788888888887666656666666788875 69999999887777764 333433333333 22 355555555666555
Q ss_pred HHHhhccc
Q 011275 222 CLAMVFCA 229 (489)
Q Consensus 222 ~~~~~~~p 229 (489)
++..+++.
T Consensus 175 l~~~~~vr 182 (250)
T PF06813_consen 175 LVAMFFVR 182 (250)
T ss_pred HHHhhhee
Confidence 54444443
No 221
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.47 E-value=9.6e-08 Score=91.67 Aligned_cols=158 Identities=11% Similarity=0.059 Sum_probs=107.2
Q ss_pred HhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHH
Q 011275 317 KSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTF 396 (489)
Q Consensus 317 ~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (489)
+......|+......+...+.+++.|++.||+.||.++..|..+-.++.++..... ..|.....-.+.+++
T Consensus 64 ni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~--------~Fwq~~l~R~~vGiG- 134 (493)
T KOG1330|consen 64 NISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN--------HFWQVLLCRGFVGIG- 134 (493)
T ss_pred CCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH--------HHHHHHHHHHHhccc-
Confidence 33334467888888899999999999999999999998887666666555443321 111111111111111
Q ss_pred hcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CchhHHHHHHHHHHHHHHHHhhcccCCC
Q 011275 397 ALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-PQLLYSIFGTFCLMAVAFVKRNVVETKG 475 (489)
Q Consensus 397 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~pet~~ 475 (489)
-.+..|+...+++|+||...|++..++.+.....|..++-.....+-+..+ |++.|...+++.++..+++..+++|..+
T Consensus 135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred hhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 112457777899999999999999999998887776554433333333333 7888888888888888877777887776
Q ss_pred CCHHHHHH
Q 011275 476 KSLQEIEI 483 (489)
Q Consensus 476 ~~~~e~~~ 483 (489)
...+|.++
T Consensus 215 ga~~~~~~ 222 (493)
T KOG1330|consen 215 GARDEVDG 222 (493)
T ss_pred cccccccc
Confidence 55555554
No 222
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.44 E-value=1.1e-05 Score=80.91 Aligned_cols=162 Identities=13% Similarity=0.037 Sum_probs=91.3
Q ss_pred HHHHHhcCCCcc---hHHHHHHHHHHHHHHHHHHHHh----hcCCchhHHHh-hHHHHHHHHHHHHHhhcc---C---CC
Q 011275 313 SSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMD----KLGRKALLQWS-FFSMAVSMAIQVAASSSY---I---PG 378 (489)
Q Consensus 313 ~~~~~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~d----r~grr~~~~~~-~~~~~~~~~~~~~~~~~~---~---~~ 378 (489)
+.+++..+.+.. .......+..++..++.|+++| |+|||+..+.. .....++..++....... . ..
T Consensus 28 ~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~ 107 (477)
T TIGR01301 28 TPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDK 107 (477)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccc
Confidence 334566666644 4445556777788889999999 59999987664 333333333332221100 0 00
Q ss_pred c---hhhHHHHHHHHHHHHHHhcCccccccccccccCCchhh--hhHHHHHHHHHHHHHHHHHHHHHHH--HHHh-----
Q 011275 379 S---ASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIR--AKAMAVCMSVHWVINFFVGLLFLRL--LEQL----- 446 (489)
Q Consensus 379 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----- 446 (489)
. ...+..+.++.+..+.......|. .++.+|+.|++.| +.+.++.+....+|+.+++.+.... .+..
T Consensus 108 ~~~~~~i~~~~i~~~lld~~~n~~~~p~-rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~ 186 (477)
T TIGR01301 108 KTKPRAIIVFVVGFWILDVANNMLQGPC-RAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKT 186 (477)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccc
Confidence 0 111222222222223333333344 4689999998865 5688887777777777776654332 1111
Q ss_pred --------CCchhHHHHHHHHHHHHHHHHhhcccCCC
Q 011275 447 --------GPQLLYSIFGTFCLMAVAFVKRNVVETKG 475 (489)
Q Consensus 447 --------g~~~~~~~~~~~~~~~~~~~~~~~pet~~ 475 (489)
+....|.+-+++.++...+.....||.+-
T Consensus 187 ~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 187 EACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 22456666666666666667777888653
No 223
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.43 E-value=1.7e-06 Score=85.23 Aligned_cols=162 Identities=21% Similarity=0.251 Sum_probs=116.1
Q ss_pred HHHHHHhhhhccceeeccchhhhhhhcC-CCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHH
Q 011275 55 VATLSSFLFGYHLGVVNEPLESISLDLG-FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (489)
Q Consensus 55 ~~~l~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~ 133 (489)
...+..++.+...+.++...+...+|.| .+.+ ..+...+...+.-++.-...+++..|+|-|+++.++.+.+++=..
T Consensus 211 ~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~--~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~ 288 (400)
T PF03825_consen 211 VFLLAAFLIGISHAAYYTFFSIYLQELGGYSGS--TIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWL 288 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchhh--HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 3344445555555555556666677776 4332 234555555556667778899999999999999999999998888
Q ss_pred HHHhc-chHHHHHH----HHHHHhhhcccccccccchhcccCCcccchhhhhHHHH-HHHHHHHHHHHhhcccccCCch-
Q 011275 134 ISATT-RNLIGMLL----GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQI-ATCLGLMGSLLIGIPVKEIAGW- 206 (489)
Q Consensus 134 l~~~~-~~~~~l~~----~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~- 206 (489)
+.+.. ++.+...+ .-.++|+..|........|+.+..|++.|++..+++.. ...+|..+|..+++.+.+..+-
T Consensus 289 l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~ 368 (400)
T PF03825_consen 289 LYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGAR 368 (400)
T ss_pred HHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcch
Confidence 88777 55444333 35679999999999999999999999999999999875 5678889999888887665442
Q ss_pred ----hHHHHHHHHHHH
Q 011275 207 ----WRICFWVSIVPA 218 (489)
Q Consensus 207 ----wr~~f~~~~~~~ 218 (489)
|...+.+.+...
T Consensus 369 ~~~~~~~~~~v~a~~~ 384 (400)
T PF03825_consen 369 GMFDWSAVFLVFAVMA 384 (400)
T ss_pred hhhhHHHHHHHHHHHH
Confidence 344554443333
No 224
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.42 E-value=2e-05 Score=75.30 Aligned_cols=153 Identities=17% Similarity=0.085 Sum_probs=95.5
Q ss_pred HHHHHhcCCCcchHHHHH---HHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHH
Q 011275 313 SSVFKSAGLSSGLANVFV---GIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGM 389 (489)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~---~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (489)
+.+.+..+++.+...+.. .+...+..+.-|.+.||+|.|+....+.+...+-++......... + ...++ +.++
T Consensus 38 ~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~--~-~~~ll-~~gl 113 (417)
T COG2223 38 VFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYP--S-TWQLL-VIGL 113 (417)
T ss_pred hhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCC--c-hHHHH-HHHH
Confidence 334455666665444444 444555567799999999999988887777776666655543321 1 11222 2222
Q ss_pred HHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CchhHHHHHHHHHHHH---
Q 011275 390 LMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG---PQLLYSIFGTFCLMAV--- 463 (489)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~--- 463 (489)
++ +..-+...+...++++-||+|++|.+.|+.. .+|+|..+..++.+.+....+ +..+..++.+..++..
T Consensus 114 l~---G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~ 189 (417)
T COG2223 114 LL---GLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLA 189 (417)
T ss_pred HH---hcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2222223344557899999999999999988 999999999988888877777 5544444444433332
Q ss_pred HHHHhhcccC
Q 011275 464 AFVKRNVVET 473 (489)
Q Consensus 464 ~~~~~~~pet 473 (489)
.+.....||.
T Consensus 190 ~~~~~d~p~~ 199 (417)
T COG2223 190 WLGMNDVPEH 199 (417)
T ss_pred HHHhCCChhh
Confidence 3333446663
No 225
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.42 E-value=2.8e-06 Score=87.53 Aligned_cols=136 Identities=18% Similarity=0.176 Sum_probs=93.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHH-hcCccc
Q 011275 324 GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTF-ALGAGP 402 (489)
Q Consensus 324 ~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 402 (489)
.+......+|..+|+++.|.++||+|||+++..+.+...++.+......+ ...+ ..+-+..++ ..+...
T Consensus 121 ~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~------~~~~----~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 121 ALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN------YWMF----LIFRFLSGFFGSGPLT 190 (521)
T ss_pred HHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc------HHHH----HHHHHHHHhhccchhH
Confidence 34567778999999999999999999999998888877776655443321 1111 122222222 223345
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccC
Q 011275 403 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVET 473 (489)
Q Consensus 403 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet 473 (489)
+.+.+..|+++++.|+.+..+ ....+.++.+.+.....+.. +|++.+.+.........++ .+..||.
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 677788999999999999999 77778888777776666655 5666666666555555443 4445576
No 226
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.41 E-value=1.3e-05 Score=79.77 Aligned_cols=157 Identities=18% Similarity=0.137 Sum_probs=95.2
Q ss_pred hHHHHHHhcCCCcchHHHHHH-HHHHHHHHHHHHHHhhc-----CCch-hHHHhhHHHHHHHHHHHHHhhccCCCchhhH
Q 011275 311 FSSSVFKSAGLSSGLANVFVG-IANLLGSVVAMVLMDKL-----GRKA-LLQWSFFSMAVSMAIQVAASSSYIPGSASLY 383 (489)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~-i~~~~g~~~~g~l~dr~-----grr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (489)
-.|.++++.|.+.....+... ..-.+..++.|+++||+ |||+ .+..+....+++...+.... .....+
T Consensus 21 ~~~~~l~~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~-----~~~~~~ 95 (402)
T PRK11902 21 TLQAWMTVEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCP-----PHAALW 95 (402)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcC-----ccchHH
Confidence 345666777776543222111 11257778999999999 8876 45555555555444433221 111111
Q ss_pred HHHHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHH
Q 011275 384 LSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ-LGPQLLYSIFGTFCLMA 462 (489)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~ 462 (489)
......++.. .+.....|....+.+|.+|+++|+++.++......++..+++.+...+.+. .||...|.+.+++.++.
T Consensus 96 ~l~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~ 174 (402)
T PRK11902 96 PLAGLAVLVA-FLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAG 174 (402)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHH
Confidence 1111111111 223334456667899999999999999999988788888888776666664 48888888877776655
Q ss_pred HHHHHhhcccCC
Q 011275 463 VAFVKRNVVETK 474 (489)
Q Consensus 463 ~~~~~~~~pet~ 474 (489)
.+. ....||++
T Consensus 175 ~l~-~~~~~e~~ 185 (402)
T PRK11902 175 ALT-TLWAPEPE 185 (402)
T ss_pred HHH-HHhcCCCc
Confidence 443 34566664
No 227
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.39 E-value=4e-06 Score=84.10 Aligned_cols=136 Identities=15% Similarity=0.119 Sum_probs=103.6
Q ss_pred HHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc
Q 011275 59 SSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT 138 (489)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~ 138 (489)
..++........+...+.+.++. ...++ ..+.......++..++.+++++++||+|||+++..+.++.+++.++..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~y~~~~v-l~~~~-~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~ 310 (428)
T PF13347_consen 233 AFFLQWLAFALMNTFLPYYFTYV-LGNEG-LISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFL 310 (428)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHH-hcCch-hhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHH
Confidence 33444444444555555555543 33232 34667778888999999999999999999999999999999999988877
Q ss_pred c--hHHHHHHHHHHHhhhcccccccccchhcccCCcc-------cchhhhhHHHHHHHHHHHHHHHh
Q 011275 139 R--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF-------VRGTYGAFIQIATCLGLMGSLLI 196 (489)
Q Consensus 139 ~--~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~-------~Rg~~~~~~~~~~~~G~~~~~~~ 196 (489)
+ |.+.+++.-++.|++.|...+....+++|..+.+ +.|...+..+...-+|..++..+
T Consensus 311 ~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i 377 (428)
T PF13347_consen 311 GPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAI 377 (428)
T ss_pred HhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHH
Confidence 6 9999999999999999999999999999999743 34677777777777765555444
No 228
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.38 E-value=5.3e-06 Score=86.87 Aligned_cols=121 Identities=19% Similarity=0.055 Sum_probs=82.1
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhc---cCC---------------------
Q 011275 322 SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSS---YIP--------------------- 377 (489)
Q Consensus 322 ~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~---~~~--------------------- 377 (489)
..|+......++..++.++.+++.||.|||+.+.++.++++++.++....... +..
T Consensus 69 ~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~ 148 (633)
T TIGR00805 69 SSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMEN 148 (633)
T ss_pred cceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCC
Confidence 35666777889999999999999999999999988888888887766543200 000
Q ss_pred -----------------C--chhhHHHHHHHHHHHHHHhc-CccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHH
Q 011275 378 -----------------G--SASLYLSVGGMLMFVLTFAL-GAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGL 437 (489)
Q Consensus 378 -----------------~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~ 437 (489)
. .....+.+.+ -+..+.+. ...++...++.|.+|++.|+...++......++..+++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~l 226 (633)
T TIGR00805 149 LTQALRPTQCPSECQKQHKESLMWLLFLVS--QLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYL 226 (633)
T ss_pred CCCCccccccccccccccCCCceehhhHHH--HHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHH
Confidence 0 0011111111 11222221 223566779999999999999999999998888888877
Q ss_pred HHHHHHH
Q 011275 438 LFLRLLE 444 (489)
Q Consensus 438 ~~~~~~~ 444 (489)
+.+.+.+
T Consensus 227 lgg~l~~ 233 (633)
T TIGR00805 227 LGSFCLQ 233 (633)
T ss_pred HHHHHHh
Confidence 7665553
No 229
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.36 E-value=3.8e-06 Score=85.41 Aligned_cols=107 Identities=8% Similarity=0.047 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHh-----cchHHHHHHHHHHHhhhcccccccccc
Q 011275 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-----TRNLIGMLLGRFVVGTGMGLGPTVAAL 164 (489)
Q Consensus 90 ~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~-----~~~~~~l~~~R~l~G~g~g~~~~~~~~ 164 (489)
.++..+...++..++.+++++++||+|||+.+..+.++.+++.+.... ..+.+.+++.-++.|++.+...+...+
T Consensus 268 ~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~a 347 (473)
T PRK10429 268 FPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVI 347 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666788899999999999999999998888776666555432 345566667778889998888888888
Q ss_pred hhcccCCc-------ccchhhhhHHHHHHHHHHHHHHHh
Q 011275 165 YVTEVSPP-------FVRGTYGAFIQIATCLGLMGSLLI 196 (489)
Q Consensus 165 ~i~e~~p~-------~~Rg~~~~~~~~~~~~G~~~~~~~ 196 (489)
+++|..+. +..|...+......-+|..+++.+
T Consensus 348 m~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i 386 (473)
T PRK10429 348 MVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFF 386 (473)
T ss_pred HHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999662 333457777777666665555444
No 230
>PRK09669 putative symporter YagG; Provisional
Probab=98.35 E-value=5.7e-06 Score=83.45 Aligned_cols=108 Identities=16% Similarity=0.072 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHh--cchHHHHHHHHHHHhhhcccccccccchhcc
Q 011275 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (489)
Q Consensus 91 ~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~--~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e 168 (489)
+.......+...++.+++++++||+|||+.+..+.++.+++.....+ ..+.+.+++.-++.|++.+...+.....++|
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455566777788999999999999999998887766654433222 3567677888899999999999999999999
Q ss_pred cCCcc-------cchhhhhHHHHHHHHHHHHHHHhhc
Q 011275 169 VSPPF-------VRGTYGAFIQIATCLGLMGSLLIGI 198 (489)
Q Consensus 169 ~~p~~-------~Rg~~~~~~~~~~~~G~~~~~~~~~ 198 (489)
..+.+ ..|...+..+....+|..+|+.+++
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g 383 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVG 383 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 88632 2355667777666777666655543
No 231
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.29 E-value=6e-05 Score=74.15 Aligned_cols=131 Identities=15% Similarity=0.102 Sum_probs=89.4
Q ss_pred HhHHHHHHhcCCC----cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHH
Q 011275 310 YFSSSVFKSAGLS----SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLS 385 (489)
Q Consensus 310 ~~~~~~~~~~~~~----~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (489)
+..+.+.++.|++ .+........+..+..+.+|++.||+|-|+++..+.+.-.+...+..+..+. ...
T Consensus 47 ~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl--------~~L 118 (511)
T TIGR00806 47 FITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSV--------WHM 118 (511)
T ss_pred HHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH--------HHH
Confidence 3344555555554 3456667778899999999999999999999888777666666555443211 111
Q ss_pred HHHHHHHHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Q 011275 386 VGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLL 451 (489)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 451 (489)
...-++++++-+. ....+.++...+|++.|+++.|+..+...+|.++++.+... ....||...
T Consensus 119 ~i~R~llGvaEA~--~~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y 181 (511)
T TIGR00806 119 QLMEVFYSVTMAA--RIAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISY 181 (511)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhH
Confidence 1112222222222 22455688899999999999999999999999999988766 556777543
No 232
>PRK10133 L-fucose transporter; Provisional
Probab=98.27 E-value=7.9e-06 Score=82.07 Aligned_cols=131 Identities=15% Similarity=0.055 Sum_probs=94.0
Q ss_pred hhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccc
Q 011275 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLG 158 (489)
Q Consensus 79 ~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~ 158 (489)
+.+|.+ +.+.++....+.++..+|.++.+++.||+|||+++..+.++.+++..+..+.++.. .+..=.+.|++.+..
T Consensus 288 ~~~g~s--~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i 364 (438)
T PRK10133 288 EIPGMT--AGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQ 364 (438)
T ss_pred hcCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHH
Confidence 345665 44568888999999999999999999999999999888877777666665655542 345567899999999
Q ss_pred cccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCchhHHHHHHH
Q 011275 159 PTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (489)
Q Consensus 159 ~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~ 214 (489)
+|.......|..|++ .+...++..+....|.+++++.| .+.+..+.-|..|++.
T Consensus 365 ~P~~~s~a~~~~~~~-~~~as~l~~~~~~g~~~~~~i~G-~l~~~~g~~~~~~~v~ 418 (438)
T PRK10133 365 YPTIFSLGIKNLGQD-TKYGSSFIVMTIIGGGIVTPVMG-FVSDAAGNIPTAELIP 418 (438)
T ss_pred HHHHHHHHHcccchh-hccchhHHhHHhccchHHHHHHH-HHHHhccchHHHHHHH
Confidence 999999999987764 56777777654433344444444 4444443236666653
No 233
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.24 E-value=1.7e-05 Score=77.94 Aligned_cols=92 Identities=16% Similarity=0.260 Sum_probs=79.0
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcc--hHHHHHHHHHHHhhhccc
Q 011275 80 DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGMGL 157 (489)
Q Consensus 80 ~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~--~~~~l~~~R~l~G~g~g~ 157 (489)
++.++.++....+.......+..++.+++.++++|+|+|+++.++.++.+++..+.-+.+ +...+++..++.++|.+.
T Consensus 264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~ 343 (467)
T COG2211 264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGI 343 (467)
T ss_pred EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhc
Confidence 455666676666677777778888899999999999999999999999999998887765 778888899999999999
Q ss_pred ccccccchhcccCC
Q 011275 158 GPTVAALYVTEVSP 171 (489)
Q Consensus 158 ~~~~~~~~i~e~~p 171 (489)
..+...+.++|...
T Consensus 344 ~~~l~wam~~d~vD 357 (467)
T COG2211 344 ANPLPWAMVADTVD 357 (467)
T ss_pred cccccHHHhcchhh
Confidence 99999999998875
No 234
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.17 E-value=4.3e-06 Score=81.22 Aligned_cols=132 Identities=15% Similarity=0.091 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhccc
Q 011275 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (489)
Q Consensus 90 ~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~ 169 (489)
.|...+...+.-++.-.+..++.+|+|.|+.++++..++++=.+++++++|.+.+.+.+.+.|+-.+........|+++.
T Consensus 261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~ 340 (412)
T PF01306_consen 261 YGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAH 340 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56777777777778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccchhhhhH-HHHHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHH
Q 011275 170 SPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (489)
Q Consensus 170 ~p~~~Rg~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~ 222 (489)
+|++..+....+ .+.+..+|..+....++.+.+..| .+..|++.+...+...
T Consensus 341 fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~ 393 (412)
T PF01306_consen 341 FDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFT 393 (412)
T ss_dssp S-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHH
Confidence 999887665555 356777777666666666666655 4666665444444333
No 235
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.13 E-value=3.8e-05 Score=69.21 Aligned_cols=134 Identities=21% Similarity=0.142 Sum_probs=92.7
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHH-HHHHHHhcchHHHHHHHHHHHhhh
Q 011275 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII-GASISATTRNLIGMLLGRFVVGTG 154 (489)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i-~~~l~~~~~~~~~l~~~R~l~G~g 154 (489)
-+++.+|+|..+ .+.+.+....-.++.+++.|.++||+||+-..+.+..+..+ +.....++ ++.=..+-.+.|++
T Consensus 290 fF~~rfGlS~~~--a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 290 FFQKRFGLSAVS--AGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLS 365 (459)
T ss_pred HHHHhhCCChhh--ccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhh
Confidence 367888887543 35566666566678889999999999999888766544333 33322222 22223445677777
Q ss_pred cccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCch--hHHHHHH
Q 011275 155 MGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW--WRICFWV 213 (489)
Q Consensus 155 ~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~--wr~~f~~ 213 (489)
.........-.++-+.|.++-|.+.++.+...++|..+-+++.+.+.+..+. |--.|.+
T Consensus 366 ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl 426 (459)
T KOG4686|consen 366 YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFL 426 (459)
T ss_pred HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHH
Confidence 6665554555678888999999999999999999998888888887776653 4444443
No 236
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.10 E-value=0.0011 Score=69.46 Aligned_cols=142 Identities=15% Similarity=0.156 Sum_probs=97.3
Q ss_pred hhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhh-cchhhHHHHHhHHHHHHHHHHHHhcch--------HHHHHHHH
Q 011275 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-GVGRRRAFQLCALPMIIGASISATTRN--------LIGMLLGR 148 (489)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~D-r~GRr~~~~~~~~~~~i~~~l~~~~~~--------~~~l~~~R 148 (489)
.+.+|.+.+. ...+...+..-.-+.++++|.++| ++||++.+.++.++..+|.++.+++.. ....+++-
T Consensus 15 ~~~lg~~~~~--A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gL 92 (654)
T TIGR00926 15 LNFLGFSEST--STVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGL 92 (654)
T ss_pred HHHcCCcHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHH
Confidence 3345665433 334455555555577889999999 599999999999999999888776421 12355677
Q ss_pred HHHhhhcccccccccchhcccCCccc---chhhhhHHHHHHHHHHHHHHHhhcccccC-------CchhHHHHHHHHHHH
Q 011275 149 FVVGTGMGLGPTVAALYVTEVSPPFV---RGTYGAFIQIATCLGLMGSLLIGIPVKEI-------AGWWRICFWVSIVPA 218 (489)
Q Consensus 149 ~l~G~g~g~~~~~~~~~i~e~~p~~~---Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~-------~~~wr~~f~~~~~~~ 218 (489)
.+..+|.|+.-+...+...|.+++++ |..+..++..+.++|.++++++...+.+. .+ |...|.+..+..
T Consensus 93 aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~-~~~aF~i~~i~m 171 (654)
T TIGR00926 93 ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDC-YPLAFGVPAILM 171 (654)
T ss_pred HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcc-hHHHHHHHHHHH
Confidence 88888999999999999999998654 44566666777777877776665444321 23 677777654444
Q ss_pred HHHH
Q 011275 219 AILC 222 (489)
Q Consensus 219 ~~~~ 222 (489)
++.+
T Consensus 172 ~ia~ 175 (654)
T TIGR00926 172 ILAL 175 (654)
T ss_pred HHHH
Confidence 4433
No 237
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.00 E-value=2.4e-05 Score=57.45 Aligned_cols=75 Identities=17% Similarity=0.176 Sum_probs=67.0
Q ss_pred eeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHH
Q 011275 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGML 145 (489)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~ 145 (489)
.+++.+|.+.+|.++|.+ +.|++.+..++||.+|++...++.++..+++.+..+.+...+....+++.+++..+.
T Consensus 10 ayTplLP~M~~~~~ls~~--~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSLS--QAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHhHhHHHHHhcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 467789999999988755 568999999999999999999999999999999999999999999999998877543
No 238
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.00 E-value=3.6e-05 Score=77.95 Aligned_cols=148 Identities=12% Similarity=0.065 Sum_probs=108.7
Q ss_pred hcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc----------chHHHHHHHHH
Q 011275 80 DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT----------RNLIGMLLGRF 149 (489)
Q Consensus 80 ~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~----------~~~~~l~~~R~ 149 (489)
++|.+.+ +.|.......++..+|....+++.+|++.|+++.++.++.+++....... ++.......-+
T Consensus 282 ~lG~s~~--~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 282 CLPGGPS--FSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cCCCCcc--hhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 4566544 55777777888999999999999999999999999999988877554311 33334556678
Q ss_pred HHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccccCCc--------hhHHHHHHHHHHHHHH
Q 011275 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG--------WWRICFWVSIVPAAIL 221 (489)
Q Consensus 150 l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~--------~wr~~f~~~~~~~~~~ 221 (489)
+++++.+........++.+.+|++.+|...++++...++|..+++.+++.+.+..| -|..+.. ..++.++.
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i-~~~~~l~~ 438 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILG-HSLAPLLP 438 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHH-HHHHHHHH
Confidence 88998888888889999999999999999999999999998888887765543322 1333222 33444444
Q ss_pred HHHhhcccC
Q 011275 222 CLAMVFCAE 230 (489)
Q Consensus 222 ~~~~~~~pE 230 (489)
+.+.+++|+
T Consensus 439 l~~~~llP~ 447 (468)
T TIGR00788 439 LPLLHLLPR 447 (468)
T ss_pred HHHHHhCCC
Confidence 444457775
No 239
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.00 E-value=6.9e-05 Score=62.80 Aligned_cols=104 Identities=17% Similarity=0.091 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCc
Q 011275 93 VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP 172 (489)
Q Consensus 93 ~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~ 172 (489)
..++......+..++.+.+.+++|.|+.+.++.+++.+-... -+-++.+.++.+-.+.|++.+..+.....|+.+...+
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 455556667788899999999999999999999998864443 3567788899999999999999999999999999999
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHhh
Q 011275 173 FVRGTYGAFIQIATCLGLMGSLLIG 197 (489)
Q Consensus 173 ~~Rg~~~~~~~~~~~~G~~~~~~~~ 197 (489)
+.|++..+++-.....+.++|.+..
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999998887666666666665543
No 240
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.97 E-value=0.00033 Score=66.77 Aligned_cols=157 Identities=17% Similarity=0.128 Sum_probs=103.8
Q ss_pred HHhcCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHH
Q 011275 316 FKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLT 395 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (489)
++....++++.......+.+.+++..+++.+|+|.|+-++.++.++++++.+..-..... ... ......|..+
T Consensus 43 f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~---~y~----~FL~~lFila 115 (422)
T COG0738 43 FDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK---SYG----FFLVALFILA 115 (422)
T ss_pred hCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh---hHH----HHHHHHHHHH
Confidence 333344466777888899999999999999999999999999999888887765332211 111 1112223333
Q ss_pred HhcCc-cccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------hCCchhHHHH
Q 011275 396 FALGA-GPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ-------------------LGPQLLYSIF 455 (489)
Q Consensus 396 ~~~~~-~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~g~~~~~~~~ 455 (489)
.+.+. -.....|+..+.|++..+.-+.+...++.+|+.++|.+...+..+ ..+...|..+
T Consensus 116 ~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~ 195 (422)
T COG0738 116 SGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLIL 195 (422)
T ss_pred hhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHH
Confidence 33321 122334788888988889999999999999999999887766542 1245677777
Q ss_pred HHHHHHHHHHH-HhhcccCCCCCHH
Q 011275 456 GTFCLMAVAFV-KRNVVETKGKSLQ 479 (489)
Q Consensus 456 ~~~~~~~~~~~-~~~~pet~~~~~~ 479 (489)
+..+++..+.. ....||.+-.+.+
T Consensus 196 ~~~lvll~v~~~~~k~p~~~~~~~~ 220 (422)
T COG0738 196 AGLLVLLAVLILLSKLPDLQVAAPS 220 (422)
T ss_pred HHHHHHHHHHHHhccCCcCCccccc
Confidence 76665554433 3445666544433
No 241
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.96 E-value=0.00025 Score=71.12 Aligned_cols=153 Identities=20% Similarity=0.149 Sum_probs=100.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccc
Q 011275 323 SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGP 402 (489)
Q Consensus 323 ~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (489)
.++.....+.|.+++.+.++++.||+|-|+++..+.++.++..++.=..... + .+..+..-++.+++.+. ..|
T Consensus 75 k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~---~---~~~~~~~R~lqGl~~g~-~~p 147 (466)
T KOG2532|consen 75 KGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI---G---FYLLLVLRFLQGLGQGV-LFP 147 (466)
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh---c---chhhHHHHHHhHHHHhH-HHh
Confidence 3566777889999999999999999999999888776666555443221111 0 01111111222222221 235
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCchhHHHHHHHHHHHHHH-HHhh--cccC-CCCC
Q 011275 403 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQ-LGPQLLYSIFGTFCLMAVAF-VKRN--VVET-KGKS 477 (489)
Q Consensus 403 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~-~~~~--~pet-~~~~ 477 (489)
....+.+.-.|++.|++..++..+...++.++.-.+.+.+-++ .||...|.+.|++.++..++ .++. -|+. +..+
T Consensus 148 a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is 227 (466)
T KOG2532|consen 148 AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNIS 227 (466)
T ss_pred hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCC
Confidence 6666788899999999999999998888777666566667676 89999999998887666432 2222 2443 4455
Q ss_pred HHHHH
Q 011275 478 LQEIE 482 (489)
Q Consensus 478 ~~e~~ 482 (489)
.+|.+
T Consensus 228 ~~El~ 232 (466)
T KOG2532|consen 228 EKELK 232 (466)
T ss_pred HHHHH
Confidence 56643
No 242
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.94 E-value=0.00034 Score=63.66 Aligned_cols=134 Identities=16% Similarity=0.173 Sum_probs=84.0
Q ss_pred HHHHHhHHHHHHhcCCCcchHHH---HHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhh
Q 011275 306 NAIFYFSSSVFKSAGLSSGLANV---FVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASL 382 (489)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (489)
+....|.+++.+..+.+....+. ...++..+| ++.|.+.|++|.+.++.++.....++..++........+....+
T Consensus 19 Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~ 97 (250)
T PF06813_consen 19 YTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVW 97 (250)
T ss_pred cchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchH
Confidence 34456888888888887654333 334565554 78899999999999999998888888777665554433222211
Q ss_pred HHHHHHHHHHHHHHhcCc-cccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 383 YLSVGGMLMFVLTFALGA-GPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE 444 (489)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (489)
.+. +..+..+.+... ....-....+.|| +.||++.|+.-+..-+.+.+...+...+..
T Consensus 98 ~~~---~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 98 LMC---LFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHH---HHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 111 111111111111 1111123458898 579999999999888888777776655443
No 243
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.93 E-value=0.00026 Score=66.51 Aligned_cols=146 Identities=16% Similarity=0.161 Sum_probs=107.3
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhc-chhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHH
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr-~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R 148 (489)
+-.-+|.+..|-|+|.. +.|+..+...+.....++....+++| -.+|+.......++.+|.+...+.+.-..+.. -
T Consensus 227 ~~~WLP~ili~~G~sa~--~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~ 303 (395)
T COG2807 227 VIGWLPAILIDRGLSAA--EAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-A 303 (395)
T ss_pred HHHHHHHHHHHcCCCHH--HhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-H
Confidence 33457999999998754 56899999999999999999999994 66788888888888777776666665444444 3
Q ss_pred HHHhhhcccccccccchhcccCCcccc-hhhhhHHHHHHHHH---HHHHHHhhcccccCCchhHHHHHHHHHHHHHH
Q 011275 149 FVVGTGMGLGPTVAALYVTEVSPPFVR-GTYGAFIQIATCLG---LMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (489)
Q Consensus 149 ~l~G~g~g~~~~~~~~~i~e~~p~~~R-g~~~~~~~~~~~~G---~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~ 221 (489)
++.|+|.|+.++.+...+.+-.++.++ ++.++ +.+.+| ...||.+.+.+.|..|.|+...+......++.
T Consensus 304 ~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSg---maQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m 377 (395)
T COG2807 304 LLLGLGQGGAFPLALTLILLRSSDAAIAAALSG---MAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLM 377 (395)
T ss_pred HHHhCccchHHHHHHHHHHhhcCChHHHHHHHH---HhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHH
Confidence 999999999999999998888765443 44444 444555 34567777777777777888877644444433
No 244
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.89 E-value=0.013 Score=57.99 Aligned_cols=117 Identities=23% Similarity=0.258 Sum_probs=65.5
Q ss_pred HhcCCCcchH---HHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCC--chhhHHHHHHHHH
Q 011275 317 KSAGLSSGLA---NVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPG--SASLYLSVGGMLM 391 (489)
Q Consensus 317 ~~~~~~~~~~---~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 391 (489)
...|++.... -....+.++.|+++..++.+|+|..+.=.++.....++..+..........+ .......+.++..
T Consensus 286 ~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~ 365 (432)
T PF06963_consen 286 KSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIAL 365 (432)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHH
Confidence 4446665433 3344567788899999999999987765555444443332222111111111 1122222222222
Q ss_pred HHHHHhcCccccccccccccCCchhhhhHHHHHHHHHHHHHHH
Q 011275 392 FVLTFALGAGPVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFF 434 (489)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~ 434 (489)
--++ -++......-+..|..|++.|++..|+-.+.+++.-.+
T Consensus 366 SR~G-LW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll 407 (432)
T PF06963_consen 366 SRIG-LWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELL 407 (432)
T ss_pred HHHH-HHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHH
Confidence 1111 12223333447789999999999999999998876543
No 245
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.87 E-value=9.9e-05 Score=65.96 Aligned_cols=75 Identities=23% Similarity=0.294 Sum_probs=53.7
Q ss_pred HHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccc-hhcccCCcccchhhh
Q 011275 102 FIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAAL-YVTEVSPPFVRGTYG 179 (489)
Q Consensus 102 ~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~-~i~e~~p~~~Rg~~~ 179 (489)
.+...+.|.|+||-|||+..+.-.+.+++++ +.-.+++|-.++++|.+.|++.+..+..--. ++.|.- ++|+.-.
T Consensus 86 mLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn--ekr~Feq 161 (454)
T KOG4332|consen 86 MLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN--EKRGFEQ 161 (454)
T ss_pred HHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh--hccCChH
Confidence 3555777899999999998776666555533 4457889999999999999998876654333 456654 4566433
No 246
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.84 E-value=0.0002 Score=71.48 Aligned_cols=139 Identities=15% Similarity=0.131 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCcccccccccc
Q 011275 330 VGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLP 409 (489)
Q Consensus 330 ~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (489)
.++..++.+..-|.++||+|||..+........+......... .|+.+ +....+...........+.+
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~---------~~~~~---~~~l~g~~~~~~s~~~a~va 138 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG---------YWFFL---LLGLSGGFSAIFSVGFAYVA 138 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH---------HHHhh---hcccccchhhhhhhhhhhee
Confidence 4567778888889999999999988777665555444433322 11110 00001111111223455899
Q ss_pred ccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCCHHH
Q 011275 410 EIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSLQE 480 (489)
Q Consensus 410 e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~~e 480 (489)
+....+.|...+|+.+..-..+..++|..........+....+.+-.+..++..++....+||+..++.++
T Consensus 139 dis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~ 209 (463)
T KOG2816|consen 139 DISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERS 209 (463)
T ss_pred eccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccc
Confidence 99999999999999999888888888888777777777777777777778888888888999998776554
No 247
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.83 E-value=0.0001 Score=72.26 Aligned_cols=126 Identities=16% Similarity=0.218 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHhh-cCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCC
Q 011275 335 LLGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFP 413 (489)
Q Consensus 335 ~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 413 (489)
-+..+++||++|| +|+|+.+..+.+++.++.+++.... .......++. +.+ +....-..=|+.+....|+||
T Consensus 75 Y~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~---~~~~~gl~i~---L~~-I~iG~Gl~K~NiS~llg~ly~ 147 (498)
T COG3104 75 YLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS---VSGPGGLYIG---LAL-IIVGTGLFKPNISSLLGELYP 147 (498)
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc---cccccHHHHH---HHH-HHhccccccccHHHHHHHhcC
Confidence 3566889999999 5999999999888888877765432 0111222222 111 122222234778888999997
Q ss_pred chh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Q 011275 414 SRI--RAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 467 (489)
Q Consensus 414 ~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 467 (489)
++. |..+.++.....++|+++.|.+.+.+-+..|+...|...++-..++.+..+
T Consensus 148 ~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~ 203 (498)
T COG3104 148 KDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFL 203 (498)
T ss_pred CCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 543 777777777788899999999888888888888888888887777765443
No 248
>PRK11462 putative transporter; Provisional
Probab=97.76 E-value=0.00049 Score=69.65 Aligned_cols=152 Identities=13% Similarity=0.180 Sum_probs=85.5
Q ss_pred hcCCCcchHHH---HHHHHHHHHHHHHHHHHhh----cCCchhHH-HhhHHHHHHHHHHHHHhhccCCCch-hhHHHHHH
Q 011275 318 SAGLSSGLANV---FVGIANLLGSVVAMVLMDK----LGRKALLQ-WSFFSMAVSMAIQVAASSSYIPGSA-SLYLSVGG 388 (489)
Q Consensus 318 ~~~~~~~~~~~---~~~i~~~~g~~~~g~l~dr----~grr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 388 (489)
..|.+...+.. ..-+...+.-++.|.++|| +|||+..+ ++.+.++++..++...+ . ..... ..++.+ .
T Consensus 39 ~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p-~-~s~~~~~~y~~~-~ 115 (460)
T PRK11462 39 IFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTP-D-LSMNGKMIYAAI-T 115 (460)
T ss_pred hhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCC-C-CCcchHHHHHHH-H
Confidence 35565554444 3445555677788999996 58876554 45555666554443222 1 11111 223322 2
Q ss_pred HHHHHHHHhcCccccccccccccCC-chhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CchhHHHHHHHHH
Q 011275 389 MLMFVLTFALGAGPVPSLLLPEIFP-SRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG-------PQLLYSIFGTFCL 460 (489)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~e~~p-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~ 460 (489)
.+++..++....-|- .++.+|+.+ ++.|++..++-...+.++..+++.+..++....| +.....+++++.+
T Consensus 116 ~~~~~~~~t~~~ipy-~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~ 194 (460)
T PRK11462 116 YTLLTLLYTVVNIPY-CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAF 194 (460)
T ss_pred HHHHHHHHHHHhccH-HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 233344444433332 236677775 7889999999999888888888777666555443 2233344555554
Q ss_pred HHHHHHHhhcccC
Q 011275 461 MAVAFVKRNVVET 473 (489)
Q Consensus 461 ~~~~~~~~~~pet 473 (489)
++........+|.
T Consensus 195 i~~~i~~~~~kE~ 207 (460)
T PRK11462 195 MMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHHhcceec
Confidence 5544444445664
No 249
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.67 E-value=0.0015 Score=60.85 Aligned_cols=243 Identities=12% Similarity=0.082 Sum_probs=139.8
Q ss_pred HHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhh
Q 011275 100 GAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYG 179 (489)
Q Consensus 100 g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~ 179 (489)
.+.++-++.=.+.|..--||+++.-.+...+...+.-+.++.+.+=+.-++.|...+... +.++|+-+..+++++.++.
T Consensus 54 SYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEI-AYysYIYs~Vd~~~Yqrvt 132 (433)
T KOG3810|consen 54 SYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEI-AYYSYIYSKVDPEMYKRVT 132 (433)
T ss_pred HHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHH-hhhheeeeecCHHHHHHHH
Confidence 344444566678999989999999888888888888899999999999999998766554 5678899999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhcccccCCch-hHHHHHHHHHHHHHHHHHhhcccCChHHHHhcCCHHHHH-HHHHHHhCCCch
Q 011275 180 AFIQIATCLGLMGSLLIGIPVKEIAGW-WRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAE-AEFEKLLGGSHV 257 (489)
Q Consensus 180 ~~~~~~~~~G~~~~~~~~~~~~~~~~~-wr~~f~~~~~~~~~~~~~~~~~pEsp~~l~~~~~~~~~~-~~l~~~~~~~~~ 257 (489)
+.--.+...|...|...+-.+.+...+ ....-.++.....+..+...++|.-+|-++.+.++++.. .+.+........
T Consensus 133 ~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~~ 212 (433)
T KOG3810|consen 133 GYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEMNPQASY 212 (433)
T ss_pred HHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccchhcCccchh
Confidence 998888888877777776554433211 233334443334444555667777665554443333211 111111000000
Q ss_pred hHHHHHHHhhccCCCCcchhHHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCC-C----cchHHHHHHH
Q 011275 258 KSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL-S----SGLANVFVGI 332 (489)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~i 332 (489)
.+.+++... .-...+.+..++++ ...+.+++....++++-..+|.+..-+...- + .|..-....+
T Consensus 213 ~~~l~~~~~------~l~~~l~~~y~np~----ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tl 282 (433)
T KOG3810|consen 213 MSYLRGAFV------LLWRDLQECYSNPR----LLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTL 282 (433)
T ss_pred hHHHHHHHH------HHHHHHHHHhcCch----hhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHH
Confidence 000000000 00001112222222 2223344444445556666676666555421 1 2333344555
Q ss_pred HHHHHHHHHHHHHhhcCCchh
Q 011275 333 ANLLGSVVAMVLMDKLGRKAL 353 (489)
Q Consensus 333 ~~~~g~~~~g~l~dr~grr~~ 353 (489)
.+.++.+..|.+.-++.|+.-
T Consensus 283 LGa~~~~~~g~l~i~w~r~g~ 303 (433)
T KOG3810|consen 283 LGAIAALAAGYLNINWNRWGD 303 (433)
T ss_pred HHHHHHHHHHheeeccchhhH
Confidence 666777888888666666543
No 250
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.67 E-value=2.9e-05 Score=76.22 Aligned_cols=144 Identities=23% Similarity=0.165 Sum_probs=112.2
Q ss_pred hhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhccc
Q 011275 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGL 157 (489)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~ 157 (489)
.+|.+ ..+...|.....-..|-++.-++.+++.+|+|+-+++.+++.++.+=-+.....+|.|..+-.-+++|+..+.
T Consensus 398 led~~--~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~al 475 (618)
T KOG3762|consen 398 LEDLG--GIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHAL 475 (618)
T ss_pred HhhcC--CcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHH
Confidence 34544 2333446555555667777778889999999999999999999988888888999999999999999999999
Q ss_pred ccccccchhcccCCcccchhhhhHHH-HHHHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHH
Q 011275 158 GPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (489)
Q Consensus 158 ~~~~~~~~i~e~~p~~~Rg~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 224 (489)
.+.....|+++..||+.|..+.++.+ ....+|--.|.++|+.+....+ -|..|...++..++.+++
T Consensus 476 iWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg-~~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 476 IWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG-ARTTFRIFGIACLVTLAL 542 (618)
T ss_pred HHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-hHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988875 4445566677777777666555 377777665554444433
No 251
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.45 E-value=0.16 Score=51.06 Aligned_cols=111 Identities=6% Similarity=-0.080 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHH-HHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc----ch------------------------
Q 011275 90 EGLVVSMCLGGAFIG-STLSGWIADGVGRRRAFQLCALPMIIGASISATT----RN------------------------ 140 (489)
Q Consensus 90 ~~~~~s~~~~g~~ig-~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~----~~------------------------ 140 (489)
..++-+...+...+. .++.+++++|++|++++......+...-.+.++. ++
T Consensus 45 i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~ 124 (472)
T TIGR00769 45 IPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIA 124 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHH
Confidence 345555555555444 8889999999999999988877776665555443 11
Q ss_pred ---HHHHHHHHHHHhhhcccccc-cccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhccc
Q 011275 141 ---LIGMLLGRFVVGTGMGLGPT-VAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (489)
Q Consensus 141 ---~~~l~~~R~l~G~g~g~~~~-~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~ 200 (489)
.|...+.-...-+-...... .-..+++|.++.+|-.|..++++++.++|.++++.+...+
T Consensus 125 ~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 125 ILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111122222222233333 5667899999999999999999999999988777664443
No 252
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.43 E-value=0.018 Score=56.00 Aligned_cols=125 Identities=14% Similarity=0.096 Sum_probs=74.8
Q ss_pred HHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhh
Q 011275 100 GAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYG 179 (489)
Q Consensus 100 g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~ 179 (489)
-..+-.++..+..+|+.-+.=...+..+.+++.++.++++|.+.-+++-.+.+++.|.....--.+ +..+++. ..
T Consensus 71 P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~~----~l 145 (402)
T PF02487_consen 71 PSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGKS----SL 145 (402)
T ss_pred HHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCcc----cc
Confidence 444555667778887653333445566778888888999999988999999999988877665555 4455543 34
Q ss_pred hHHHHHHHHHHHHHHHhhcccccCCch-hHHHHHHH-HHHHHHHHHHhhcccC
Q 011275 180 AFIQIATCLGLMGSLLIGIPVKEIAGW-WRICFWVS-IVPAAILCLAMVFCAE 230 (489)
Q Consensus 180 ~~~~~~~~~G~~~~~~~~~~~~~~~~~-wr~~f~~~-~~~~~~~~~~~~~~pE 230 (489)
+.+..+...+.++|...-..+.+ .++ -|..+... .+|.+..+..++.+|+
T Consensus 146 ~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 146 SAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred ccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 55555555555555554333333 222 25455443 3443333333334443
No 253
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.35 E-value=0.042 Score=52.29 Aligned_cols=143 Identities=12% Similarity=0.085 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhh-----cchhhHHHHHhH
Q 011275 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-----GVGRRRAFQLCA 125 (489)
Q Consensus 51 ~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~D-----r~GRr~~~~~~~ 125 (489)
..+.++.+-..+.|...+... ++|.+.+.-|.|.++. + +.+....-+ .--++|.|+.| |+|||+..+.-.
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~--a-~fS~ay~P~-sLKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQ--A-IFSFAYWPF-SLKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhh--h-hhhhhhhHH-HHHHHHHhhhHHHHHHhhccccceeeeh
Confidence 344455555566777777777 8898887666665432 1 223322222 23578999999 999999864322
Q ss_pred -HHHHHHHHHHH-----------hcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHH
Q 011275 126 -LPMIIGASISA-----------TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGS 193 (489)
Q Consensus 126 -~~~~i~~~l~~-----------~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~ 193 (489)
.+.+....+.+ -.++...+...-++.=+..+..-.+.-...-.+-.+++-|.++.-..++...|.+++
T Consensus 106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 12122222211 122333332233333344444444455566667788889999999888888888777
Q ss_pred HHhhc
Q 011275 194 LLIGI 198 (489)
Q Consensus 194 ~~~~~ 198 (489)
..+-.
T Consensus 186 ~~ifL 190 (510)
T KOG3574|consen 186 NVVFL 190 (510)
T ss_pred cceee
Confidence 66543
No 254
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.31 E-value=0.0041 Score=59.91 Aligned_cols=119 Identities=17% Similarity=0.218 Sum_probs=94.6
Q ss_pred hhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhh-cchhhHHHHHhHHHHHHHHHH---HHhcchHHHHHHHHHHHhhh
Q 011275 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-GVGRRRAFQLCALPMIIGASI---SATTRNLIGMLLGRFVVGTG 154 (489)
Q Consensus 79 ~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~D-r~GRr~~~~~~~~~~~i~~~l---~~~~~~~~~l~~~R~l~G~g 154 (489)
+-||++..+ .....+....|..+|-...|++.. |.++|+.-.+++....++-.+ ++...+.+.+...-++.|++
T Consensus 237 ~Vfgmsv~e--TT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g 314 (403)
T PF03209_consen 237 EVFGMSVGE--TTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLG 314 (403)
T ss_pred HHcCCCHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHh
Confidence 445676554 356778888888999999998777 788887777776666555443 45567788888999999999
Q ss_pred cccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcc
Q 011275 155 MGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (489)
Q Consensus 155 ~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~ 199 (489)
.|.........+-|+.++++-|.+++.++..+.++..++.++|+.
T Consensus 315 ~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~ 359 (403)
T PF03209_consen 315 NGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGA 359 (403)
T ss_pred hhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888899999999999999999999999987777777654
No 255
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.31 E-value=0.0025 Score=61.79 Aligned_cols=97 Identities=15% Similarity=0.207 Sum_probs=69.3
Q ss_pred HHHHHhhhhhhh----cchhhHHHHHhHHH-HHHHHHHHHhcchHHHHH------------HHHHHHh-----hhccccc
Q 011275 102 FIGSTLSGWIAD----GVGRRRAFQLCALP-MIIGASISATTRNLIGML------------LGRFVVG-----TGMGLGP 159 (489)
Q Consensus 102 ~ig~~~~g~l~D----r~GRr~~~~~~~~~-~~i~~~l~~~~~~~~~l~------------~~R~l~G-----~g~g~~~ 159 (489)
.+.+++.|..+| ||||||.++.+... .+++.++.+.+.++..++ +.-++.| ++.-...
T Consensus 81 ~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~q 160 (498)
T KOG0637|consen 81 LLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQ 160 (498)
T ss_pred ceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhh
Confidence 467899999999 59998888766444 455666677766554432 2233333 4444566
Q ss_pred ccccchhcccCCcccchh-hhhHHHHHHHHHHHHHHHhhc
Q 011275 160 TVAALYVTEVSPPFVRGT-YGAFIQIATCLGLMGSLLIGI 198 (489)
Q Consensus 160 ~~~~~~i~e~~p~~~Rg~-~~~~~~~~~~~G~~~~~~~~~ 198 (489)
..+-++.+|.+..+++.+ +++++.....+|..+|-.+|.
T Consensus 161 gp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 161 GPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 678889999997766666 999999999999887777764
No 256
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.31 E-value=0.0023 Score=64.57 Aligned_cols=143 Identities=17% Similarity=0.133 Sum_probs=95.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCcccc
Q 011275 324 GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 403 (489)
Q Consensus 324 ~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (489)
+.......++.+++.+.++.+.||++-.+.+....+.-++..++.....+ ...+ ++.-++.++.-+ +..|.
T Consensus 84 ~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s------~~~~--ialr~llGl~es-~~wP~ 154 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHS------FPGL--IALRFLLGLFES-GGWPG 154 (495)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhh------hHHH--HHHHHHHHHHhc-ccchH
Confidence 45667778899999999999999999555433322222221111111111 1111 111222233333 33466
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH------HhCCchhHHHHHHHHHHHHHHHHhhcccCCC
Q 011275 404 PSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE------QLGPQLLYSIFGTFCLMAVAFVKRNVVETKG 475 (489)
Q Consensus 404 ~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~~pet~~ 475 (489)
...+++.-|.++.|+.-+|+-++...+++.+++.+...+.. ..||++.|++-|++.+...+++.+.+|+-.-
T Consensus 155 ~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 155 VVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 66688999999999999999999999999998887655432 3578999999999999998888878776544
No 257
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.27 E-value=0.00073 Score=49.22 Aligned_cols=61 Identities=26% Similarity=0.353 Sum_probs=49.5
Q ss_pred cceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHH
Q 011275 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (489)
Q Consensus 66 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~ 128 (489)
..+.+.|.+|...++.|++. .+.|.+.+...+...++++++|.++||+||++..+....++
T Consensus 15 ~~g~~~Pfl~~~~~~~Gl~~--~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 15 ALGCLYPFLPLYLKQLGLSP--SQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHhhhhHhhhhcCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34556777888888878764 46689999999999999999999999999999987765543
No 258
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.14 E-value=0.0059 Score=59.28 Aligned_cols=117 Identities=17% Similarity=0.135 Sum_probs=72.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCcccc
Q 011275 324 GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPV 403 (489)
Q Consensus 324 ~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (489)
.+.+++..+..++-.+.+.|+.||+|-|.....+....+++..+=........++.....+...+-.+-......-.+ +
T Consensus 82 ~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~-l 160 (480)
T KOG2563|consen 82 DWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILG-L 160 (480)
T ss_pred HHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhc-c
Confidence 467788888889999999999999999999988888887777654443332222222211222222222222111111 1
Q ss_pred ccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 404 PSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRL 442 (489)
Q Consensus 404 ~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (489)
+.=...--||+++|+++..+..+.+.+|..++.. .+++
T Consensus 161 PskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l-lppi 198 (480)
T KOG2563|consen 161 PSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL-LPPI 198 (480)
T ss_pred ccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh-ccce
Confidence 2223445589999999999999888887765554 3443
No 259
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.00 E-value=0.025 Score=59.44 Aligned_cols=130 Identities=13% Similarity=0.142 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHhh-cCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCC
Q 011275 335 LLGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFP 413 (489)
Q Consensus 335 ~~g~~~~g~l~dr-~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 413 (489)
-+..+++|+++|+ +||++.+.++.+...++..++...................++. .+....-+.-|...+...|.++
T Consensus 37 yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLa-Lia~G~GgiKp~vsaf~gdqf~ 115 (654)
T TIGR00926 37 YLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLA-LIALGTGGIKPCVSAFGGDQFE 115 (654)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHH-HHHhhccccccCchhhhHhhcC
Confidence 3555778899997 6999988888777777665554322111111111111111111 1112222233667777888886
Q ss_pred ch---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCchhHHHHHHHHHHHHHH
Q 011275 414 SR---IRAKAMAVCMSVHWVINFFVGLLFLRLLEQL-------GPQLLYSIFGTFCLMAVAF 465 (489)
Q Consensus 414 ~~---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~ 465 (489)
.+ .|.....+.....++|+.+++.+.+.+.+.. ++...|.+.+++.+++.+.
T Consensus 116 ~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 116 ERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 43 4778888888889999988888777665333 3556777666666655443
No 260
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.94 E-value=0.0064 Score=60.28 Aligned_cols=79 Identities=22% Similarity=0.261 Sum_probs=58.6
Q ss_pred HHHhhhhccceeeccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHH-HhHHHHHHHHHHHH
Q 011275 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ-LCALPMIIGASISA 136 (489)
Q Consensus 58 l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~-~~~~~~~i~~~l~~ 136 (489)
+..+.++...+.+.+.++.+.+++|++.+ +.|.+..+--+-.+++.+++|+++||+-+|+.++ .+.+....++++..
T Consensus 18 ~f~~~~~~~~g~l~pll~vy~kQLGl~p~--~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~ 95 (618)
T KOG3762|consen 18 LFYLFFGARFGSLFPLLAVYFKQLGLNPA--VVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLV 95 (618)
T ss_pred eeeeeeeecccccchHHHHHHHHcCCCHH--HhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhee
Confidence 34455566677788889999999998765 4577777777777899999999999998766555 45555566666655
Q ss_pred hc
Q 011275 137 TT 138 (489)
Q Consensus 137 ~~ 138 (489)
+.
T Consensus 96 fv 97 (618)
T KOG3762|consen 96 FV 97 (618)
T ss_pred ec
Confidence 43
No 261
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.71 E-value=0.21 Score=47.63 Aligned_cols=154 Identities=15% Similarity=0.100 Sum_probs=76.5
Q ss_pred HHHHhcCCCcc---hHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHH
Q 011275 314 SVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGML 390 (489)
Q Consensus 314 ~~~~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (489)
..+++.++... ..+........+...+.|.+.||+|||+.-+.-.+...++++..- .+..... +.+-+
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~------~~~~~~L---~~GRv 129 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH------SSNYPVL---LLGRV 129 (354)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh------ccccHHH---HHHHH
Confidence 34566777643 344444455666667778999999999976555555554443211 1111111 11111
Q ss_pred HHHHHHhcCcc----ccccccccccCCchhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHh--CCchhHHHHHHHHHHHH
Q 011275 391 MFVLTFALGAG----PVPSLLLPEIFPSRIRAKAMAVCMSV-HWVINFFVGLLFLRLLEQL--GPQLLYSIFGTFCLMAV 463 (489)
Q Consensus 391 ~~~~~~~~~~~----~~~~~~~~e~~p~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~ 463 (489)
+.++..++-.. =+....-..=+|.+..+...+..... +.+.+.+++.+...+.+.. |+..+|..-.++.+++.
T Consensus 130 lgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~ 209 (354)
T PF05631_consen 130 LGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAA 209 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 11111110000 00011112235666666666655433 3334555555544455544 44677777666666666
Q ss_pred HHHHhhcccCCCC
Q 011275 464 AFVKRNVVETKGK 476 (489)
Q Consensus 464 ~~~~~~~pet~~~ 476 (489)
+++...=+|..|.
T Consensus 210 ~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 210 VLILKTWPENYGD 222 (354)
T ss_pred HHHHhcccccCCC
Confidence 6665555676554
No 262
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.69 E-value=0.043 Score=55.02 Aligned_cols=155 Identities=21% Similarity=0.216 Sum_probs=84.9
Q ss_pred HHhcCCCcchHHHHHHHHHH--HHHHHHHHHHhhcC----Cc-hhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHH
Q 011275 316 FKSAGLSSGLANVFVGIANL--LGSVVAMVLMDKLG----RK-ALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGG 388 (489)
Q Consensus 316 ~~~~~~~~~~~~~~~~i~~~--~g~~~~g~l~dr~g----rr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (489)
.+..+.+.........+..+ ...++.|.++|-+. || +-+.++.++..++...+....... ...... ...
T Consensus 17 ~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~--~s~~~~--~~~ 92 (433)
T PF03092_consen 17 KDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE--SSAAIA--VVL 92 (433)
T ss_pred HHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc--chhhhH--HHH
Confidence 34566666555444444444 44578899999872 44 444455544433333333222111 111111 111
Q ss_pred HHHHHHHHhcCccccccccccccC---CchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Q 011275 389 MLMFVLTFALGAGPVPSLLLPEIF---PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAF 465 (489)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~e~~---p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 465 (489)
+++...+..+. ..+.-....|.. |.+ |+.-++.+..+..+|+.++..+.+++.+..++...|.+.+.+..+..+.
T Consensus 93 l~la~~g~a~~-DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 93 LFLASFGYAFA-DVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred HHHHHHHHHHH-HHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHH
Confidence 11111111111 112223444544 555 8888889988888888888888888888888888887777776666555
Q ss_pred HHhhcccCCCC
Q 011275 466 VKRNVVETKGK 476 (489)
Q Consensus 466 ~~~~~pet~~~ 476 (489)
.....+|.+.+
T Consensus 171 ~~~~~~e~~~~ 181 (433)
T PF03092_consen 171 ALFLLEERKVR 181 (433)
T ss_pred HHHhhhhcccc
Confidence 55566664433
No 263
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.28 E-value=0.023 Score=55.35 Aligned_cols=107 Identities=20% Similarity=0.188 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHH-----HHHHHHhcchHHHHHHHHHHHhhhcccccccccc
Q 011275 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII-----GASISATTRNLIGMLLGRFVVGTGMGLGPTVAAL 164 (489)
Q Consensus 90 ~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i-----~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~ 164 (489)
.-+....|.+|-.++---...+ |+ |++.+.+.+-..- ...+.-+.++.+.+++.-+..|+-.|..+.....
T Consensus 283 Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~ 358 (402)
T PF02487_consen 283 YRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFY 358 (402)
T ss_pred HHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 3455555666644442221111 33 4454444333322 2222335688898889999999999999999999
Q ss_pred hhcccCCcccchhhhhHHHHHHHHHHHHHHHhhccc
Q 011275 165 YVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (489)
Q Consensus 165 ~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~ 200 (489)
.+.|-.|+++|...++..+++..+|..++.+++.++
T Consensus 359 ~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 359 RISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999998887654
No 264
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.14 E-value=0.02 Score=56.23 Aligned_cols=105 Identities=11% Similarity=0.157 Sum_probs=78.2
Q ss_pred HHHHHhHHHHHHHHHHHHhc---ch------HHHHHHHHHHHhhhcccccccccchhcccCCcc---cchhhhhHHHHHH
Q 011275 119 RAFQLCALPMIIGASISATT---RN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF---VRGTYGAFIQIAT 186 (489)
Q Consensus 119 ~~~~~~~~~~~i~~~l~~~~---~~------~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~---~Rg~~~~~~~~~~ 186 (489)
+++.++.+++.+|.++..++ .+ ...+.++-++.++|.|+.=+....+.+|.++++ +|..+..++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 45677788888888873332 22 256888899999999999999999999999876 3556778889999
Q ss_pred HHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHH
Q 011275 187 CLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (489)
Q Consensus 187 ~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 224 (489)
++|.+++......+.+..+ |.+.|.+..+..++.++.
T Consensus 82 n~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccc-hhhhhhHHHHHHHHHHHH
Confidence 9999999888887777777 688888765544444333
No 265
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.06 E-value=1.2 Score=45.16 Aligned_cols=101 Identities=11% Similarity=0.033 Sum_probs=63.9
Q ss_pred HHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc---------ch----------------------HHHHHHHH
Q 011275 100 GAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT---------RN----------------------LIGMLLGR 148 (489)
Q Consensus 100 g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~---------~~----------------------~~~l~~~R 148 (489)
...+...+..+++++++|.+++......+...-.+.++. ++ .|...+.-
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfY 150 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFY 150 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 445666778999999999999988877776655554432 11 01111111
Q ss_pred HHHhhhcccccc-cccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhccc
Q 011275 149 FVVGTGMGLGPT-VAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (489)
Q Consensus 149 ~l~G~g~g~~~~-~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~ 200 (489)
++.-+-...... .-..+.+|.++.+|-.|..++++.+.++|.+++......+
T Consensus 151 v~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 151 VMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111112222 3467889999999999999999999999977665554333
No 266
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.99 E-value=0.1 Score=52.11 Aligned_cols=144 Identities=15% Similarity=0.148 Sum_probs=85.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCC-chhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccc
Q 011275 324 GLANVFVGIANLLGSVVAMVLMDKLGR-KALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGP 402 (489)
Q Consensus 324 ~~~~~~~~i~~~~g~~~~g~l~dr~gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (489)
|++.....++..+++++.++...|.+. |++++.+.+.+.++.++..... +.++. ..++...+- +..+.+.+...
T Consensus 74 G~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~--~~~~~-~~y~mL~~R--~l~Gvg~~n~a 148 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALA--YVPNG-VKYLMLVAR--ILTGVGVGNFA 148 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHH--hcccc-hHHHHHHHH--HHcCcCcccHH
Confidence 566667889999999999999999985 6666778887887777653322 12222 233222222 22233334445
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------CchhHHHHHHHHHHHHHHHHh
Q 011275 403 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLG--------------PQLLYSIFGTFCLMAVAFVKR 468 (489)
Q Consensus 403 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~~~~~~~~ 468 (489)
....|.++..-.+.|.++++......-++..++|.+ ...+..++ +..+-.+++++.++..+++..
T Consensus 149 ~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~-q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~ 227 (488)
T KOG2325|consen 149 VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTI-QLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILF 227 (488)
T ss_pred HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHH-HHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHh
Confidence 566788887777888888888776544555555543 22222221 122334556666666666665
Q ss_pred hcccC
Q 011275 469 NVVET 473 (489)
Q Consensus 469 ~~pet 473 (489)
..+|-
T Consensus 228 ~f~E~ 232 (488)
T KOG2325|consen 228 FFKEV 232 (488)
T ss_pred heeec
Confidence 55554
No 267
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.90 E-value=0.92 Score=45.22 Aligned_cols=139 Identities=16% Similarity=0.106 Sum_probs=71.6
Q ss_pred HHHHhhhhccceeeccchhhhhhh--cCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhh-----cchhhHHHHHhH----
Q 011275 57 TLSSFLFGYHLGVVNEPLESISLD--LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-----GVGRRRAFQLCA---- 125 (489)
Q Consensus 57 ~l~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~D-----r~GRr~~~~~~~---- 125 (489)
.+-.++-|...+.....+|-+.++ -+.+-++. + +.|....-+. --++|.|+.| |+|||+..++-.
T Consensus 6 ~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~--~-~fSla~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 6 VLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQ--A-IFSLASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHcCcccccccccchhhhccccCCCChhHh--e-eeeeeechhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 334466777777766777877776 34443332 2 1222111111 2356666666 899999875432
Q ss_pred --HHHHHHHHH----------HHh-------cchHH--HHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHH
Q 011275 126 --LPMIIGASI----------SAT-------TRNLI--GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQI 184 (489)
Q Consensus 126 --~~~~i~~~l----------~~~-------~~~~~--~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~ 184 (489)
.+..++.-. -.. ..+.. .+...-++.=+-.+-.-.+.-...-.+..++.++.++.-..+
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 222222211 000 00111 111111111111222223344555566678889999998888
Q ss_pred HHHHHHHHHHHhhcc
Q 011275 185 ATCLGLMGSLLIGIP 199 (489)
Q Consensus 185 ~~~~G~~~~~~~~~~ 199 (489)
+...|.+++..+...
T Consensus 162 G~~~Gyfls~tvFla 176 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLA 176 (544)
T ss_pred HhhhhHHHHHHHHHh
Confidence 888888777666443
No 268
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.83 E-value=2 Score=41.88 Aligned_cols=90 Identities=10% Similarity=-0.036 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhh----cccccCCchhHHHHHHHH
Q 011275 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG----IPVKEIAGWWRICFWVSI 215 (489)
Q Consensus 140 ~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~wr~~f~~~~ 215 (489)
.|...++.-.+.+++.|..........++. |++. +..+..+.+++..+..+.. ....+....--..|.++.
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~y----tqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~ 190 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEY----TQAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITST 190 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHH----HHHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHH
Confidence 456666777888888888777777766655 4432 2222233333322222221 111121121234455554
Q ss_pred HHHHHHHHHhhcccCChHH
Q 011275 216 VPAAILCLAMVFCAESPHW 234 (489)
Q Consensus 216 ~~~~~~~~~~~~~pEsp~~ 234 (489)
+..++..+....+|..|-.
T Consensus 191 ~~~llC~i~y~~l~~lpf~ 209 (406)
T KOG1479|consen 191 VILLLCFVLYLVLPKLPFV 209 (406)
T ss_pred HHHHHHHHHHHHhhcchHH
Confidence 4444444444566777643
No 269
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.82 E-value=0.068 Score=38.87 Aligned_cols=49 Identities=20% Similarity=0.352 Sum_probs=35.7
Q ss_pred HHhHHHHHHhcCCCcc---hHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHh
Q 011275 309 FYFSSSVFKSAGLSSG---LANVFVGIANLLGSVVAMVLMDKLGRKALLQWS 357 (489)
Q Consensus 309 ~~~~~~~~~~~~~~~~---~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~ 357 (489)
.-|.+..+++.|++.. ......-+..+++.++.|+++||+++++.....
T Consensus 20 ~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 20 YPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred HhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 3345556677777754 455555678889999999999999999876443
No 270
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=95.71 E-value=0.33 Score=50.20 Aligned_cols=144 Identities=17% Similarity=0.256 Sum_probs=103.4
Q ss_pred eccchhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhh-cchhhHHHHHhHHHHHHHHHHHHhcch--------
Q 011275 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-GVGRRRAFQLCALPMIIGASISATTRN-------- 140 (489)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~D-r~GRr~~~~~~~~~~~i~~~l~~~~~~-------- 140 (489)
..+.+..+..+++.+.. ...-..+.+........+..++++| .+||=+++.++.++..+|.++...+..
T Consensus 57 ~~nlv~ylt~~~~~~~~--~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~ 134 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGG--GAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFM 134 (571)
T ss_pred hhHHHHHHHHHhccchH--HHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 45556667778777653 3345666776677788899999999 589999999999888887554332111
Q ss_pred -----------------HHHHHHHHHHHhhhcccccccccchhcccCC---ccc-ch--hhhhHHHHHHHHHHHHHHHhh
Q 011275 141 -----------------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSP---PFV-RG--TYGAFIQIATCLGLMGSLLIG 197 (489)
Q Consensus 141 -----------------~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p---~~~-Rg--~~~~~~~~~~~~G~~~~~~~~ 197 (489)
...+..+..+..+|.|+.-+....+-+|-++ +++ +. ....++....++|.+++..+-
T Consensus 135 ~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~ 214 (571)
T KOG1237|consen 135 CKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVL 214 (571)
T ss_pred ccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHH
Confidence 1245667777888999988888899999998 322 23 678888899999988887776
Q ss_pred cccccCCchhHHHHHHHHH
Q 011275 198 IPVKEIAGWWRICFWVSIV 216 (489)
Q Consensus 198 ~~~~~~~~~wr~~f~~~~~ 216 (489)
....+..+ |.+-|.+...
T Consensus 215 vyiq~~~~-w~lgf~i~~~ 232 (571)
T KOG1237|consen 215 VYIQDNVG-WKLGFGIPTV 232 (571)
T ss_pred Hhhhhccc-ceeeccHHHH
Confidence 66666666 6777766433
No 271
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.47 E-value=3.2 Score=41.64 Aligned_cols=90 Identities=14% Similarity=0.036 Sum_probs=48.7
Q ss_pred hHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcc----cccCC-chh--HHHHH
Q 011275 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP----VKEIA-GWW--RICFW 212 (489)
Q Consensus 140 ~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~----~~~~~-~~w--r~~f~ 212 (489)
.+...++.-++.|++.|........+.+ .+|++ .+..+..+.+++.+++.++-.. ..+.. ..+ ...|.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~ 179 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFG 179 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHH
Confidence 4666677788899998888877777666 55653 4444445555544433333211 11100 112 23344
Q ss_pred HHHHHHHHHHHHhhcccCChHH
Q 011275 213 VSIVPAAILCLAMVFCAESPHW 234 (489)
Q Consensus 213 ~~~~~~~~~~~~~~~~pEsp~~ 234 (489)
++.+..++.++....++.+|..
T Consensus 180 ~a~~v~l~~i~~~~~l~k~~~~ 201 (437)
T TIGR00939 180 TPCVVQLICIVCYLLLPKLPFA 201 (437)
T ss_pred HHHHHHHHHHHHHHHHhcCHHH
Confidence 4545455555555567777654
No 272
>PRK03612 spermidine synthase; Provisional
Probab=95.33 E-value=0.31 Score=50.01 Aligned_cols=131 Identities=15% Similarity=0.033 Sum_probs=67.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHH-HHH-HHHHHH----HhcchH-HHHHHHHHHHhhhcc
Q 011275 84 NGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL-PMI-IGASIS----ATTRNL-IGMLLGRFVVGTGMG 156 (489)
Q Consensus 84 ~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~-~~~-i~~~l~----~~~~~~-~~l~~~R~l~G~g~g 156 (489)
..+..+++.+.+.++.|.++|+.+.+++.++--|+....-..+ +.+ +...+. +....+ ..+...-++.|+-.|
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G 125 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIG 125 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345566889999999999999999988754433332211111 111 111111 111111 112334556677778
Q ss_pred cccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcc-cccCCchhHHHHHHHH
Q 011275 157 LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP-VKEIAGWWRICFWVSI 215 (489)
Q Consensus 157 ~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~wr~~f~~~~ 215 (489)
+..|....+..+... ++-|+..+-......+|.++|.++..+ +....|-++..+.++.
T Consensus 126 ~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~ 184 (521)
T PRK03612 126 MEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGS 184 (521)
T ss_pred HHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 887776655544322 122344555555666666555555332 2333343555555443
No 273
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.92 E-value=0.97 Score=41.07 Aligned_cols=51 Identities=10% Similarity=0.027 Sum_probs=29.9
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHhhccc---cc-CCchhHHHHHHHHHHHHHHHH
Q 011275 173 FVRGTYGAFIQIATCLGLMGSLLIGIPV---KE-IAGWWRICFWVSIVPAAILCL 223 (489)
Q Consensus 173 ~~Rg~~~~~~~~~~~~G~~~~~~~~~~~---~~-~~~~wr~~f~~~~~~~~~~~~ 223 (489)
++|+..+.+-..+..+|.++..+.-... .+ ....|++++.+.++..++-++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLI 56 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLI 56 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888888888888866554442221 11 112289888775544444333
No 274
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.34 E-value=3.9 Score=40.76 Aligned_cols=138 Identities=13% Similarity=0.055 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHH----HHHHHHHHHHhhccCC---CchhhHHHHHHHHHHHHH---
Q 011275 326 ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM----AVSMAIQVAASSSYIP---GSASLYLSVGGMLMFVLT--- 395 (489)
Q Consensus 326 ~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--- 395 (489)
..+.-.+..++.+..-|...||..|.+......+.. ++++.++......... ..............+...
T Consensus 43 ygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~L 122 (432)
T PF06963_consen 43 YGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERL 122 (432)
T ss_pred HHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHH
Confidence 334455566666677788999999988766553332 2222222221111111 011121111212222221
Q ss_pred HhcCcc-ccccccccccC--CchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Q 011275 396 FALGAG-PVPSLLLPEIF--PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAV 463 (489)
Q Consensus 396 ~~~~~~-~~~~~~~~e~~--p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 463 (489)
.+.+.. .+-.=++..+. +++..+...+...-+--+...++|.+.+.+.+..+......+.++..+++.
T Consensus 123 as~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~ 193 (432)
T PF06963_consen 123 ASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASV 193 (432)
T ss_pred HHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHH
Confidence 111111 01111222233 345556666666666666888899988887776776655555555555443
No 275
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=93.90 E-value=1.6 Score=40.39 Aligned_cols=107 Identities=24% Similarity=0.228 Sum_probs=59.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhc-Cccc
Q 011275 324 GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFAL-GAGP 402 (489)
Q Consensus 324 ~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 402 (489)
+.......+....+.++.|.+.||+|||+....+.....++........ ........+. ... .+... ...+
T Consensus 42 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~--~g~~~~~~~~ 113 (338)
T COG0477 42 GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP-----NVGLALLLIL-RLL--QGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc-----cchHHHHHHH-HHH--HHhhhHHHHH
Confidence 4555566677777779999999999999776665543222211111111 1011111111 111 11111 2345
Q ss_pred cccccccccCCc-hhhhhHHHHHHH-HHHHHHHHHHHH
Q 011275 403 VPSLLLPEIFPS-RIRAKAMAVCMS-VHWVINFFVGLL 438 (489)
Q Consensus 403 ~~~~~~~e~~p~-~~r~~~~~~~~~-~~~~~~~~~~~~ 438 (489)
....+..|.+|. +.|+...+.... ...++..+++.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLL 151 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666788999987 678888888777 355555555543
No 276
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.66 E-value=2.2 Score=42.63 Aligned_cols=97 Identities=15% Similarity=0.164 Sum_probs=72.7
Q ss_pred HHHHHHHHhhhhhhh---cchhhHHHHHhHHHHHHHHHHHHhc------------------chHHHHHHHHHHHhhhccc
Q 011275 99 GGAFIGSTLSGWIAD---GVGRRRAFQLCALPMIIGASISATT------------------RNLIGMLLGRFVVGTGMGL 157 (489)
Q Consensus 99 ~g~~ig~~~~g~l~D---r~GRr~~~~~~~~~~~i~~~l~~~~------------------~~~~~l~~~R~l~G~g~g~ 157 (489)
+|..++....+.+++ ++||++.+..+.++..++.++.-.. +++...++.-++.|++-+.
T Consensus 290 ~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~ 369 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDAC 369 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHH
Confidence 344455566667765 5899999999888887777776432 2455667788999999998
Q ss_pred ccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHh
Q 011275 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI 196 (489)
Q Consensus 158 ~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~ 196 (489)
.......++.+.. +++|..+.+++-.-..++..++...
T Consensus 370 ~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 370 FNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhh
Confidence 8888888999999 6778888888877777776665544
No 277
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.34 E-value=1.2 Score=44.49 Aligned_cols=107 Identities=11% Similarity=0.039 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcchhh--HHHH--HhHHHHHHHHHHHHhc---------chHHHHHHHHHHHhhhccc
Q 011275 91 GLVVSMCLGGAFIGSTLSGWIADGVGRR--RAFQ--LCALPMIIGASISATT---------RNLIGMLLGRFVVGTGMGL 157 (489)
Q Consensus 91 ~~~~s~~~~g~~ig~~~~g~l~Dr~GRr--~~~~--~~~~~~~i~~~l~~~~---------~~~~~l~~~R~l~G~g~g~ 157 (489)
-.....|.+|-.+|-.+..+.. .-++| .++. ++-+++.-.-++|..- ++-+..++.-++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 3566677788888877554321 11222 3332 2333444444455332 4555667778999999999
Q ss_pred ccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhc
Q 011275 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (489)
Q Consensus 158 ~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~ 198 (489)
....+..+..+..+++||..+..+...+..+|...|..++.
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888887754
No 278
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=92.27 E-value=6.1 Score=33.18 Aligned_cols=103 Identities=15% Similarity=0.097 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCcccccc
Q 011275 326 ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPS 405 (489)
Q Consensus 326 ~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (489)
..........+.+++++.+.+++|.|..+.++.+...+-...... +.. +.....-.+.+++.+.-+ ....
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~------~~~---~~l~~~s~l~G~~~a~lW-~aqg 111 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY------PNS---YTLYPASALLGFGAALLW-TAQG 111 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh------hhH---HHHHHHHHHHhhhhHHhh-Hhhh
Confidence 344455667788888899999999999887776554433322211 111 111111122222222211 1223
Q ss_pred ccccccCCchhhhhHHHHHHHHHHHHHHHHHHH
Q 011275 406 LLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLL 438 (489)
Q Consensus 406 ~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~ 438 (489)
.++.+...++.|++-.++...+......+++.+
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~ 144 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLF 144 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 467788888889998888888777665555543
No 279
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=91.77 E-value=14 Score=37.38 Aligned_cols=41 Identities=12% Similarity=-0.119 Sum_probs=36.3
Q ss_pred cccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 403 VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLL 443 (489)
Q Consensus 403 ~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (489)
+.|.+.+|++..+...+-.++....++++..+++.+...+.
T Consensus 149 lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 149 LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999998765544
No 280
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=90.52 E-value=1.3 Score=43.35 Aligned_cols=114 Identities=12% Similarity=0.002 Sum_probs=66.9
Q ss_pred hHHHhhHHHHHHHHHHHHHhhccCC-CchhhHHHHHHHHHHHHHHhcCccccccccccccCCch---hhhhHHHHHHHHH
Q 011275 353 LLQWSFFSMAVSMAIQVAASSSYIP-GSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSR---IRAKAMAVCMSVH 428 (489)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~---~r~~~~~~~~~~~ 428 (489)
.+.++.+...++.+++......... ..........++.+ ......+.=|+...+.+|.|+++ .|.+........-
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~l-ia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLAL-IAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHH-HHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHH-HHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 4556666666666664433322111 11111112222222 12222234467777888999765 4677777788888
Q ss_pred HHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Q 011275 429 WVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVAFVK 467 (489)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 467 (489)
++|+.++....+.+.+..++...|.+.++..+++.+..+
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 889988888777777788888888888877777765443
No 281
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=90.33 E-value=21 Score=35.80 Aligned_cols=111 Identities=9% Similarity=-0.047 Sum_probs=70.7
Q ss_pred HHHHHHHHH-HHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhc---------chH-------------------
Q 011275 91 GLVVSMCLG-GAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT---------RNL------------------- 141 (489)
Q Consensus 91 ~~~~s~~~~-g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~---------~~~------------------- 141 (489)
.++=..+.+ ...+..++.+++.++.-|.+++......+...-+++++. +++
T Consensus 64 ~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~il 143 (509)
T COG3202 64 SFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFIL 143 (509)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeE
Confidence 444444544 566788899999999999999988888887777776653 110
Q ss_pred ----HHHHHHHHHHhhhcccccc-cccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccc
Q 011275 142 ----IGMLLGRFVVGTGMGLGPT-VAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (489)
Q Consensus 142 ----~~l~~~R~l~G~g~g~~~~-~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~ 201 (489)
|...+.-.+.=+=...... .-.....|.+..+|-.|..+++++..+++.+++..+..++.
T Consensus 144 i~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~ 208 (509)
T COG3202 144 IVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLS 208 (509)
T ss_pred eecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111111111111111111 23446789999999999999999999999776666555443
No 282
>PRK03612 spermidine synthase; Provisional
Probab=89.15 E-value=9.2 Score=39.35 Aligned_cols=45 Identities=22% Similarity=0.329 Sum_probs=29.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCchhHHHHHHHHHH
Q 011275 417 RAKAMAVCMSVHWVINFFVGLLFLRLL-EQLGPQLLYSIFGTFCLM 461 (489)
Q Consensus 417 r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~ 461 (489)
-+...|-...++.+|+.+++.+.+.++ ..+|......+.+.+.++
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~ 188 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLL 188 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 356677888888888888888766544 356655454455544433
No 283
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=88.38 E-value=0.11 Score=49.37 Aligned_cols=106 Identities=18% Similarity=0.202 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhc-chhhHHHHH--hHHHHHHHHHHHH----------hcchHHHHHHHHHHHhhhccccc
Q 011275 93 VVSMCLGGAFIGSTLSGWIADG-VGRRRAFQL--CALPMIIGASISA----------TTRNLIGMLLGRFVVGTGMGLGP 159 (489)
Q Consensus 93 ~~s~~~~g~~ig~~~~g~l~Dr-~GRr~~~~~--~~~~~~i~~~l~~----------~~~~~~~l~~~R~l~G~g~g~~~ 159 (489)
....|.+|-.+|-.+.++.--+ -.+|.++.. .-+++.-.-++|. ..+|-+..++.=++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4556778888888877653211 134544433 2233322222331 23344556777889999999999
Q ss_pred ccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhc
Q 011275 160 TVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (489)
Q Consensus 160 ~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~ 198 (489)
.....+..+..++++|..+..+...+..+|...|..++.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp HHHH-----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988999888877754
No 284
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=87.79 E-value=0.13 Score=49.07 Aligned_cols=34 Identities=15% Similarity=0.013 Sum_probs=1.8
Q ss_pred ccccccccccCCchhhhhHHHHHHHHHHHHHHHH
Q 011275 402 PVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFV 435 (489)
Q Consensus 402 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~ 435 (489)
.+...+.++..+++.|-.+..+......+|-.++
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~G 300 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIG 300 (309)
T ss_dssp HHHH------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444567777877777777666555544444333
No 285
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=86.96 E-value=8.8 Score=37.59 Aligned_cols=106 Identities=16% Similarity=0.073 Sum_probs=74.4
Q ss_pred HHHHHH-HHHHHHHHHHhhhhhhhcchhhHHHHHhHH--HHHHHHHH------HHhcchHHHHHHHHHHHhhhccccccc
Q 011275 91 GLVVSM-CLGGAFIGSTLSGWIADGVGRRRAFQLCAL--PMIIGASI------SATTRNLIGMLLGRFVVGTGMGLGPTV 161 (489)
Q Consensus 91 ~~~~s~-~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~--~~~i~~~l------~~~~~~~~~l~~~R~l~G~g~g~~~~~ 161 (489)
.+.... |.+.-.+|.+...++-++= ||.......+ ++.-.-.+ ...-.+-+++++.-.+.|+..|-....
T Consensus 285 ~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl 363 (406)
T KOG1479|consen 285 LLLVFLSFNVFDLIGSILAALLTWPD-PRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSL 363 (406)
T ss_pred HHHHHHHhHHHHHhhhhhhhcccCCC-CceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhh
Confidence 345555 8888888876666665554 3433322211 11111111 123456677888899999999999999
Q ss_pred ccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhh
Q 011275 162 AALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG 197 (489)
Q Consensus 162 ~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~ 197 (489)
...+..+-.|++++-.+..+.......|...|.+++
T Consensus 364 ~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 364 IMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred eehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 999999999999999999999999999988888775
No 286
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=85.91 E-value=7.8 Score=28.65 Aligned_cols=58 Identities=21% Similarity=0.181 Sum_probs=40.9
Q ss_pred HHHHHHhcCCCc---chHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHH
Q 011275 312 SSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 369 (489)
Q Consensus 312 ~~~~~~~~~~~~---~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~ 369 (489)
.|.+.++.+++. ++......++.++|++...++.++..+++.+..+.+...+......
T Consensus 15 LP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 15 LPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMA 75 (85)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 455666666653 4667778899999999999988887777777776665555544433
No 287
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=80.14 E-value=4 Score=38.19 Aligned_cols=77 Identities=14% Similarity=0.091 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHHHHHHhhcccc
Q 011275 125 ALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (489)
Q Consensus 125 ~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~~~~~~~~~~ 201 (489)
.+++.+...+..+.++++..++.-+..|+-+|..+....--+.+-.++++|-.+++....+-..|..++..++.++.
T Consensus 326 Nl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 34455555666788999999999999999999998888777888788899999999999999999988888877653
No 288
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=80.00 E-value=10 Score=35.96 Aligned_cols=71 Identities=13% Similarity=0.138 Sum_probs=53.8
Q ss_pred HHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccccchhcccCC
Q 011275 100 GAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (489)
Q Consensus 100 g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p 171 (489)
..+...++.+.+..++|-|..+.++...+... +..=+=+.+..++-.-...|+|.+..+..--+|+++...
T Consensus 70 ~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 34466677779999999999998877766442 222244677888899999999999999888888877664
No 289
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=79.59 E-value=1.3 Score=43.63 Aligned_cols=67 Identities=18% Similarity=0.108 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccc
Q 011275 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLG 158 (489)
Q Consensus 90 ~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~ 158 (489)
+|+.......| +.+...-++.||+|-|+.+..+...+.++..+.+...+......-|-..|+-.+..
T Consensus 336 ~GL~ins~~lg--i~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~ 402 (498)
T KOG0637|consen 336 LGLMLNSIVLG--IYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPL 402 (498)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecch
Confidence 35555555555 88899999999999777777777778899888888888888887777777444433
No 290
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=75.42 E-value=1.1e+02 Score=31.98 Aligned_cols=133 Identities=14% Similarity=0.110 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHhhc-CCchhHHHhhHHHHHHHHHHHHHhh---ccC------C-----Cc-hhhHHHHHHHHHHHHH
Q 011275 332 IANLLGSVVAMVLMDKL-GRKALLQWSFFSMAVSMAIQVAASS---SYI------P-----GS-ASLYLSVGGMLMFVLT 395 (489)
Q Consensus 332 i~~~~g~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~~---~~~------~-----~~-~~~~~~~~~~~~~~~~ 395 (489)
.......+++++++|-+ ||-+++.++.++..+++.++-.... ... . .. ......+....++...
T Consensus 84 G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia 163 (571)
T KOG1237|consen 84 GTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIA 163 (571)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHhe
Confidence 44455667889999975 8888877776665555443322111 110 0 00 1111111111111111
Q ss_pred -HhcCccccccccccccCCch----hhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Q 011275 396 -FALGAGPVPSLLLPEIFPSR----IRA--KAMAVCMSVHWVINFFVGLLFLRLLEQLGPQLLYSIFGTFCLMAVA 464 (489)
Q Consensus 396 -~~~~~~~~~~~~~~e~~p~~----~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 464 (489)
...|.=|....+-+|-++.. .+. .-..+.....+.+..++-.+..+..+..+|...|.+..++.+++.+
T Consensus 164 ~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~ 239 (571)
T KOG1237|consen 164 LGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAIL 239 (571)
T ss_pred eccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHH
Confidence 12222356666778888722 222 4555555555656666655555555677887777777766555543
No 291
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=73.59 E-value=43 Score=32.69 Aligned_cols=18 Identities=17% Similarity=0.335 Sum_probs=12.9
Q ss_pred HHHHHHHh-----hcCCchhHHH
Q 011275 339 VVAMVLMD-----KLGRKALLQW 356 (489)
Q Consensus 339 ~~~g~l~d-----r~grr~~~~~ 356 (489)
++...+.| |+|||+..+.
T Consensus 81 llWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred HHHHhhhHHHHHHhhccccceee
Confidence 45566777 9999986544
No 292
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=69.86 E-value=1.2e+02 Score=30.07 Aligned_cols=90 Identities=16% Similarity=0.104 Sum_probs=50.0
Q ss_pred HHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHhcCccccccccccccCCchhhhh
Q 011275 340 VAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGMLMFVLTFALGAGPVPSLLLPEIFPSRIRAK 419 (489)
Q Consensus 340 ~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 419 (489)
....+.|.++-|++++.+.+...+...++.+..+. ..+. ..-+.++... +.....+.|+--..|+++-.+
T Consensus 60 ~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv-------~~mq-~~q~~yg~~~--a~evay~sYiys~v~~~~yq~ 129 (412)
T PF01770_consen 60 PVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSV-------LAMQ-LMQFFYGLAT--AAEVAYYSYIYSVVDKEHYQK 129 (412)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcH-------HHHH-HHHHHHHHHH--HHHHHHHHHheeecCHHHHHH
Confidence 44567899999999887766555554444333211 1111 1112222222 122333345555568888888
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 011275 420 AMAVCMSVHWVINFFVGLLF 439 (489)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~ 439 (489)
+.+.+.+..-+|.+++..+.
T Consensus 130 vts~~raa~l~g~~~s~~lg 149 (412)
T PF01770_consen 130 VTSYTRAATLVGRFISSLLG 149 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888877766666666543
No 293
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=66.89 E-value=1.1e+02 Score=32.88 Aligned_cols=154 Identities=18% Similarity=0.080 Sum_probs=87.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhc---------------cCC----------
Q 011275 323 SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSS---------------YIP---------- 377 (489)
Q Consensus 323 ~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~---------------~~~---------- 377 (489)
+|+.....-+++.+...+..+...|.-|-+.+-+|.+.++++.++..+..-. ..+
T Consensus 134 sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~ 213 (735)
T KOG3626|consen 134 SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCN 213 (735)
T ss_pred ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhcc
Confidence 4555555667777777777788888888888888888888877765432100 000
Q ss_pred -----------Cc----hhhHHHHHHHHHHHHHHhcCccc---cccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHH
Q 011275 378 -----------GS----ASLYLSVGGMLMFVLTFALGAGP---VPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLF 439 (489)
Q Consensus 378 -----------~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~ 439 (489)
.. .........+++-.+..++|..| +...|+-|...++.-..-.|+..++.-+|.+++=.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllg 293 (735)
T KOG3626|consen 214 KSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLG 293 (735)
T ss_pred CCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHH
Confidence 00 00000111112222333445444 4556888999888888999998888777665444333
Q ss_pred HHHHH---Hh---------------C-CchhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011275 440 LRLLE---QL---------------G-PQLLYSIFGTFCLMAVAFVKRNVVETKGKS 477 (489)
Q Consensus 440 ~~~~~---~~---------------g-~~~~~~~~~~~~~~~~~~~~~~~pet~~~~ 477 (489)
+.+.. .+ | |+.-|.+.+.+.++..+.+ ++.|+++.++
T Consensus 294 S~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~-f~fPk~lp~~ 349 (735)
T KOG3626|consen 294 SFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPL-FFFPKELPKS 349 (735)
T ss_pred HHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHH-HhCcccCccc
Confidence 32221 11 1 2345666676666665554 3455554443
No 294
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=60.16 E-value=75 Score=28.06 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHhhhhhh---hcchhhHHHHHhHHH
Q 011275 94 VSMCLGGAFIGSTLSGWIA---DGVGRRRAFQLCALP 127 (489)
Q Consensus 94 ~s~~~~g~~ig~~~~g~l~---Dr~GRr~~~~~~~~~ 127 (489)
......++.+|..+.+.+. ++..+|+.....+.+
T Consensus 52 ~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~ 88 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLL 88 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHH
Confidence 3344556667777777772 233344444443333
No 295
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=59.89 E-value=3 Score=43.03 Aligned_cols=116 Identities=12% Similarity=0.038 Sum_probs=1.2
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHhhHHHHHHHHHHHHHhhccCC------C---------------
Q 011275 320 GLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIP------G--------------- 378 (489)
Q Consensus 320 ~~~~~~~~~~~~i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~------~--------------- 378 (489)
....|+.....-++.++..++..++.+|-.|-+.+.++.++++++.++.....-...+ .
T Consensus 37 S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~ 116 (539)
T PF03137_consen 37 SSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDS 116 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccc
Confidence 3345667777778888888888888888666667777777788777665432110000 0
Q ss_pred -----------------chhhHHHHHHHHHHHHHHhcCcc---ccccccccccCCchhhhhHHHHHHHHHHHHHHHH
Q 011275 379 -----------------SASLYLSVGGMLMFVLTFALGAG---PVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFV 435 (489)
Q Consensus 379 -----------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~ 435 (489)
..........+++-.+..++|.. ++..+|+-|..+++.-+.-.|+..++..+|..++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~G 193 (539)
T PF03137_consen 117 SSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALG 193 (539)
T ss_dssp -----------------------------------SSS---------------------------------------
T ss_pred cccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHH
Confidence 00000011111111222334433 4566789999999999999998888776665443
No 296
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=59.87 E-value=2.1e+02 Score=29.29 Aligned_cols=43 Identities=12% Similarity=-0.130 Sum_probs=37.1
Q ss_pred ccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011275 402 PVPSLLLPEIFPSRIRAKAMAVCMSVHWVINFFVGLLFLRLLE 444 (489)
Q Consensus 402 ~~~~~~~~e~~p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (489)
-+.|.+..|+++.+...+-.++....++++..+++.+...+..
T Consensus 163 lLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 163 LLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999998887655544
No 297
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=59.12 E-value=68 Score=29.72 Aligned_cols=49 Identities=20% Similarity=0.341 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHH--hCCchhHHHHHHHHHHHHHHHHhhcccCCCCCH
Q 011275 430 VINFFVGLLFLRLLEQ--LGPQLLYSIFGTFCLMAVAFVKRNVVETKGKSL 478 (489)
Q Consensus 430 ~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~~ 478 (489)
+.+.+++.....+.+. .|+...|-..+....+++......=-|.-|++.
T Consensus 178 lvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps 228 (454)
T KOG4332|consen 178 LVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPS 228 (454)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChh
Confidence 3455556555555554 466667665555544554444433445555543
No 298
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=56.33 E-value=22 Score=28.93 Aligned_cols=25 Identities=20% Similarity=0.380 Sum_probs=19.4
Q ss_pred ccccCCchhhhhHHHHHHHHHHHHH
Q 011275 408 LPEIFPSRIRAKAMAVCMSVHWVIN 432 (489)
Q Consensus 408 ~~e~~p~~~r~~~~~~~~~~~~~~~ 432 (489)
+.|++|++.|....+..+...+...
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k 84 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVK 84 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 5699999999999888776655433
No 299
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=56.14 E-value=1e+02 Score=31.87 Aligned_cols=72 Identities=13% Similarity=0.180 Sum_probs=31.7
Q ss_pred HHHhhhccchhHHHHHHHHHHHHhhhhHHHHHHhHHHHHHhcCCCcch----HHHHHHHHHHHHHHHHHHHHhhcCC
Q 011275 278 FEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGL----ANVFVGIANLLGSVVAMVLMDKLGR 350 (489)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~g~~~~g~l~dr~gr 350 (489)
-.|+++.+....++.......+|.+........+..... ......|. ......+.+.++...++++...++.
T Consensus 251 hgDVFR~P~~~~lls~lvG~G~Qll~~~~~~~~~a~~g~-~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 251 HGDVFRPPKHPMLLSALVGTGIQLLFMALVTLFFAALGF-LSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred hHHHhcCcCCchHHHhHhcchhhhhHHHHHHHHHHHhhh-ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCC
Confidence 357787776665555444444444332222211111111 11111222 2233445555666666666666654
No 300
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=52.49 E-value=49 Score=30.34 Aligned_cols=99 Identities=12% Similarity=0.092 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhc-chhhHHHH----HhHHHHHHHHHHHH-hc----chHHHHHHHHHHHhhhcccccccc
Q 011275 93 VVSMCLGGAFIGSTLSGWIADG-VGRRRAFQ----LCALPMIIGASISA-TT----RNLIGMLLGRFVVGTGMGLGPTVA 162 (489)
Q Consensus 93 ~~s~~~~g~~ig~~~~g~l~Dr-~GRr~~~~----~~~~~~~i~~~l~~-~~----~~~~~l~~~R~l~G~g~g~~~~~~ 162 (489)
..-.+..|+.+|.+..|+.... +-||+-+. .+++.+.+..+... .. .++..+.+.-++.|+..=+..++.
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~Vi 225 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVI 225 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3445677888898999998885 55555543 22333333333321 11 135557777788887653333332
Q ss_pred cchhcccCCcccchhhhhHHHHHHHHHHHH
Q 011275 163 ALYVTEVSPPFVRGTYGAFIQIATCLGLMG 192 (489)
Q Consensus 163 ~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~~ 192 (489)
.++.+-++...+.+..-.++..+.+|.++
T Consensus 226 -L~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 226 -LNLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred -hcChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 23333344445556666667777777553
No 301
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=49.47 E-value=1.6e+02 Score=28.49 Aligned_cols=94 Identities=19% Similarity=0.197 Sum_probs=59.3
Q ss_pred hhhhhhhcCCCCchhHHHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHhHHHHHHHH-----HHHHhc----chHHHH
Q 011275 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA-----SISATT----RNLIGM 144 (489)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~-----~l~~~~----~~~~~l 144 (489)
+.++...+. ...-.|.+++.+.|.....+|+...-++.|.--.-+-...-.++-.++. .-..++ ++-+.+
T Consensus 30 l~tLatyLl-G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vl 108 (508)
T COG4262 30 LGTLATYLL-GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVL 108 (508)
T ss_pred HHHHHHHhc-CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHH
Confidence 334444443 3445677899999999999999999998886443322222222222221 111222 355677
Q ss_pred HHHHHHHhhhcccccccccchhcc
Q 011275 145 LLGRFVVGTGMGLGPTVAALYVTE 168 (489)
Q Consensus 145 ~~~R~l~G~g~g~~~~~~~~~i~e 168 (489)
.++-++.|.=.|...|....++..
T Consensus 109 y~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 109 YALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHH
Confidence 788899999999999888766544
No 302
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=46.06 E-value=40 Score=27.53 Aligned_cols=23 Identities=17% Similarity=0.167 Sum_probs=18.2
Q ss_pred ccccCCchhhhhHHHHHHHHHHH
Q 011275 408 LPEIFPSRIRAKAMAVCMSVHWV 430 (489)
Q Consensus 408 ~~e~~p~~~r~~~~~~~~~~~~~ 430 (489)
+.|++|+..|.......+...+.
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s~ 80 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTNF 80 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHH
Confidence 56999999999988887765443
No 303
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=44.69 E-value=67 Score=27.75 Aligned_cols=22 Identities=27% Similarity=0.363 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHhhhhhhhcchh
Q 011275 96 MCLGGAFIGSTLSGWIADGVGR 117 (489)
Q Consensus 96 ~~~~g~~ig~~~~g~l~Dr~GR 117 (489)
-|.+|+.+++.+.|+++||.-+
T Consensus 90 GyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 90 GYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hHHHHHHHHHHHHHHHHHhhhc
Confidence 5888999999999999999986
No 304
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.59 E-value=67 Score=24.78 Aligned_cols=29 Identities=14% Similarity=0.153 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHhhhhhhhcc-hhhHHHHHh
Q 011275 96 MCLGGAFIGSTLSGWIADGV-GRRRAFQLC 124 (489)
Q Consensus 96 ~~~~g~~ig~~~~g~l~Dr~-GRr~~~~~~ 124 (489)
.=+++..+-....||+.||| |.+|..++.
T Consensus 50 sefIsGilVGa~iG~llD~~agTsPwglIv 79 (116)
T COG5336 50 SEFISGILVGAGIGWLLDKFAGTSPWGLIV 79 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 33344344445678999985 555554443
No 305
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=41.60 E-value=1.2e+02 Score=23.31 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHhhcCCchhHHHhhHHHHH
Q 011275 332 IANLLGSVVAMVLMDKLGRKALLQWSFFSMAV 363 (489)
Q Consensus 332 i~~~~g~~~~g~l~dr~grr~~~~~~~~~~~~ 363 (489)
+..++|.+++-|+=.+++-++...+.+++.++
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 34455556666666667776654444444443
No 306
>COG3619 Predicted membrane protein [Function unknown]
Probab=41.30 E-value=2.7e+02 Score=25.07 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhhhcchh
Q 011275 87 TLAEGLVVSMCLGGAFIGSTLSGWIADGVGR 117 (489)
Q Consensus 87 ~~~~~~~~s~~~~g~~ig~~~~g~l~Dr~GR 117 (489)
+...........+.+.+|......+..|..|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4444556666677777886666666666665
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.82 E-value=1.8e+02 Score=22.48 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=29.7
Q ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011275 413 PSRIRAKAMAVCMSVHWVINFFVGLLFLRLLEQL 446 (489)
Q Consensus 413 p~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (489)
.++.++.+.++-.+.-.+.+.+.+..++++++.+
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678899999999999999999999999999875
No 308
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=37.82 E-value=2.8e+02 Score=28.35 Aligned_cols=23 Identities=17% Similarity=0.174 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHHHHHHHhhcccC
Q 011275 451 LYSIFGTFCLMAVAFVKRNVVET 473 (489)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~pet 473 (489)
...++|.+.++..+++.+..+|.
T Consensus 202 yl~fwg~~~l~~T~~v~~~k~E~ 224 (544)
T PF13000_consen 202 YLKFWGWVFLIVTILVAFFKKEK 224 (544)
T ss_pred HHHHHHHHHHHHHHHHheEeecc
Confidence 44566777777766666555553
No 309
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=34.14 E-value=1.2e+02 Score=25.28 Aligned_cols=24 Identities=25% Similarity=0.320 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhhhhhhhcchhhH
Q 011275 96 MCLGGAFIGSTLSGWIADGVGRRR 119 (489)
Q Consensus 96 ~~~~g~~ig~~~~g~l~Dr~GRr~ 119 (489)
-|.+|+.+.+.+.|++.+|..|++
T Consensus 61 Gyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 61 GYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred hHHHHHHHHHHHHHHHHHhccccc
Confidence 488899999999999999998864
No 310
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=31.18 E-value=1.5e+02 Score=21.20 Aligned_cols=31 Identities=23% Similarity=0.143 Sum_probs=23.0
Q ss_pred hhhcchhhHHHHHhHHHHHHHHHHHHhcchH
Q 011275 111 IADGVGRRRAFQLCALPMIIGASISATTRNL 141 (489)
Q Consensus 111 l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~ 141 (489)
--|+-.|++-|.+.+.+-..+-++++.....
T Consensus 10 ~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~ 40 (73)
T PF11298_consen 10 SQDQRRRRRRYLIMMGIRIPCFVLAAVVYRL 40 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3467788888988888877777777766654
No 311
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=27.06 E-value=1.9e+02 Score=20.17 Aligned_cols=31 Identities=19% Similarity=0.194 Sum_probs=15.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 011275 447 GPQLLYSIFGTFCLMAVAFVKRNVVETKGKS 477 (489)
Q Consensus 447 g~~~~~~~~~~~~~~~~~~~~~~~pet~~~~ 477 (489)
|+...+.+...+.++++-++-..+||..+..
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~a 59 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQA 59 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhcccC
Confidence 3333333333344444455557789876653
No 312
>COG4769 Predicted membrane protein [Function unknown]
Probab=24.59 E-value=84 Score=26.37 Aligned_cols=46 Identities=28% Similarity=0.181 Sum_probs=33.8
Q ss_pred HHHHHhhhhhhhcchhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhh
Q 011275 102 FIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (489)
Q Consensus 102 ~ig~~~~g~l~Dr~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~ 153 (489)
++.+...-++..++|+|.+-.++.. ...++.+|..++.+.+++.|-
T Consensus 87 ~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 87 AILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhc
Confidence 4556666778889998877444433 345678999999999999874
No 313
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=24.48 E-value=3.7e+02 Score=22.47 Aligned_cols=50 Identities=14% Similarity=0.152 Sum_probs=29.2
Q ss_pred chHHHHHHHHHHHhhhcccccccccchhcccCCcccchhhhhHHHHHHHHHHH
Q 011275 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLM 191 (489)
Q Consensus 139 ~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~Rg~~~~~~~~~~~~G~~ 191 (489)
+++..++..-.+.|+|. ..+.+..++-.+.+++-|...++-..-.+++-+
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 34445555555555543 223344556667788788887777666666544
No 314
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=24.31 E-value=2.6e+02 Score=21.71 Aligned_cols=25 Identities=20% Similarity=0.137 Sum_probs=14.7
Q ss_pred HHHHhhhcccccccccchhcccCCc
Q 011275 148 RFVVGTGMGLGPTVAALYVTEVSPP 172 (489)
Q Consensus 148 R~l~G~g~g~~~~~~~~~i~e~~p~ 172 (489)
|.+.+.|.-+.+..-.++..|...-
T Consensus 56 ~~~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 56 YAILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHHHhhHccccccHHHHHHHHHHH
Confidence 4444555445556666777777754
No 315
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=23.87 E-value=1.9e+02 Score=27.61 Aligned_cols=61 Identities=18% Similarity=0.159 Sum_probs=42.5
Q ss_pred HHHHHHHhhhhhhhc--chhhHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHhhhcccccccc
Q 011275 100 GAFIGSTLSGWIADG--VGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVA 162 (489)
Q Consensus 100 g~~ig~~~~g~l~Dr--~GRr~~~~~~~~~~~i~~~l~~~~~~~~~l~~~R~l~G~g~g~~~~~~ 162 (489)
-..+..+......|| ||.|-.+ ..++.+.+-++.+++++.++=+.+-.+..++.|.....-
T Consensus 74 PsL~iKl~~Pff~~rfpf~~Ri~~--~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTF 136 (409)
T KOG3880|consen 74 PSLAIKLTAPFFIHRFPFGFRIAL--VVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITF 136 (409)
T ss_pred HHHHHHHhchhhhhhcccchHHHH--HHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeeh
Confidence 334555666777776 5666443 445566677778899999988888888888877666443
No 316
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=21.94 E-value=2.6e+02 Score=18.83 Aligned_cols=45 Identities=7% Similarity=0.029 Sum_probs=20.9
Q ss_pred HHHHHHHHHHhhcccccCCchhHHHHHHHHHHHHHHHHHhhcccCC
Q 011275 186 TCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (489)
Q Consensus 186 ~~~G~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~pEs 231 (489)
..+|..++.+.+.......+ .+....++.+.+++...+....|++
T Consensus 11 ~il~~vvgyI~ssL~~~~~n-~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGVTYN-FTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHhCCCCC-hHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 33444444444332222233 4555666656666555554444443
No 317
>PRK10263 DNA translocase FtsK; Provisional
Probab=21.00 E-value=9.6e+02 Score=28.00 Aligned_cols=18 Identities=22% Similarity=0.337 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHhhcC
Q 011275 332 IANLLGSVVAMVLMDKLG 349 (489)
Q Consensus 332 i~~~~g~~~~g~l~dr~g 349 (489)
.++.+|..++..+..-+|
T Consensus 63 l~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 63 LGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccchHHHHHHHHHHHHHh
Confidence 334444444444444444
No 318
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=20.85 E-value=3.6e+02 Score=20.67 Aligned_cols=20 Identities=15% Similarity=0.235 Sum_probs=9.9
Q ss_pred hhhhcchhhHHHHHhHHHHH
Q 011275 110 WIADGVGRRRAFQLCALPMI 129 (489)
Q Consensus 110 ~l~Dr~GRr~~~~~~~~~~~ 129 (489)
||=.++|-++.+.+..++.+
T Consensus 65 WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 65 WLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHhhcCCCcHHHHHHHHHH
Confidence 33335776665544444433
Done!