BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011279
(489 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum
tuberosum GN=MPP PE=1 SV=1
Length = 504
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/510 (69%), Positives = 417/510 (81%), Gaps = 27/510 (5%)
Query: 1 MYRNAASRLRALKGHVRCRVPSATRFASSSAVASTSSSSGGLFSWLTGERSSSSPSLDFP 60
MYR A+SRL +LK RV TRF+SS+AVA+ SGGLFSW+TG+ SSS LDFP
Sbjct: 1 MYRCASSRLSSLKARQGNRV--LTRFSSSAAVAT--KPSGGLFSWITGDTSSSVTPLDFP 56
Query: 61 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGT 120
L V L P LPDYVEP KT+I+TL NG+K+ASE SV+P ASI LYV CGSIYE+P S+G
Sbjct: 57 LNDVKLSPPLPDYVEPAKTQITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGA 116
Query: 121 THLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM------ 174
THLLERMAF+ST NRSHLRIVRE+EAIGGNV ASASRE M Y++DALKTYVP+M
Sbjct: 117 THLLERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLAD 176
Query: 175 ---------------LTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINR 219
L KVK+EISE S NPQ LLLEA+HSAGY+G N L+A E+ INR
Sbjct: 177 CVRNPAFLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHSAGYAGPYGNSLMATEATINR 236
Query: 220 LNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY 279
LNST+LEEFVAENYT PRMVLAASGVEH++ + VAEPLLSDLP + EEPK VY GGDY
Sbjct: 237 LNSTVLEEFVAENYTAPRMVLAASGVEHEEFLKVAEPLLSDLPKVATIEEPKPVYVGGDY 296
Query: 280 RCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 339
RCQAD+ ++THF LAFE+PGGW +K++MTLTVLQML+GGGGSFSAGGPGKGMYSRLY
Sbjct: 297 RCQADA--EMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYL 354
Query: 340 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQ 399
RVLN++PQ+ +FSAFS+IYN++G+FGIQGTT SDF +A+D+A +ELI+VA P EVDQVQ
Sbjct: 355 RVLNQYPQIHAFSAFSSIYNNTGLFGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQVQ 414
Query: 400 LDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQK 459
L+RAKQ+TKSAILMNLESRMV SEDIGRQ+LTYGER PVEHFLK ++ V+AKDIASV QK
Sbjct: 415 LNRAKQATKSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQK 474
Query: 460 LLSSPLTMASYGDVINVPSYDAVSSKFKSK 489
L+SSPLTMASYGDV+++PSYDAVSS+F+SK
Sbjct: 475 LISSPLTMASYGDVLSLPSYDAVSSRFRSK 504
>sp|Q9ZU25|MPPA1_ARATH Probable mitochondrial-processing peptidase subunit alpha-1
OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1
Length = 503
Score = 596 bits (1537), Expect = e-169, Method: Compositional matrix adjust.
Identities = 316/508 (62%), Positives = 387/508 (76%), Gaps = 26/508 (5%)
Query: 1 MYRNAASRLRALKGHVRCRVPSATRFASSSAVASTSSSSGGLFSWLTGERSSSSPSLDFP 60
MYR AASR RALKG V R R+ASSSAVA TSSS+ SWL+G ++ SLD P
Sbjct: 1 MYRTAASRARALKG-VLTRSLRPARYASSSAVAETSSSTPAYLSWLSGGSRAALTSLDMP 59
Query: 61 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGT 120
L GVSLPP L D VEP K +I+TLPNG+KIASET+ +P ASI LYV CGSIYE+P G
Sbjct: 60 LQGVSLPPPLADKVEPSKLQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGA 119
Query: 121 THLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM------ 174
THLLERMAF+ST NR+H R+VRE+EAIGGN ASASREQM Y+ DALKTYVPEM
Sbjct: 120 THLLERMAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLID 179
Query: 175 ---------------LTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINR 219
L K+K EI+E++ NP LLEAIHSAGYSG LA+PL APESA++R
Sbjct: 180 SVRNPAFLDWEVNEELRKMKVEIAELAKNPMGFLLEAIHSAGYSGPLASPLYAPESALDR 239
Query: 220 LNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY 279
LN LLEEF+ EN+T RMVLAASGVEH++L+ VAEPL SDLP++ P+ PKS Y GGD+
Sbjct: 240 LNGELLEEFMTENFTAARMVLAASGVEHEELLKVAEPLTSDLPNVPPQLAPKSQYVGGDF 299
Query: 280 RCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 339
R +G + THF +AFE+P GW+ +K+A+T TVLQML+GGGGSFSAGGPGKGM+S LYR
Sbjct: 300 RQH--TGGEATHFAVAFEVP-GWNNEKEAVTATVLQMLMGGGGSFSAGGPGKGMHSWLYR 356
Query: 340 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQ 399
RVLNE+ +VQS +AF++I+N +G+FGI G + F +KAI+LAA+EL VA G+V+Q
Sbjct: 357 RVLNEYQEVQSCTAFTSIFNDTGLFGIYGCSSPQFAAKAIELAAKELKDVAG-GKVNQAH 415
Query: 400 LDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQK 459
LDRAK +TKSA+LMNLESRM+ +EDIGRQ+LTYGERKPV+ FLK+V+ +T KDIA K
Sbjct: 416 LDRAKAATKSAVLMNLESRMIAAEDIGRQILTYGERKPVDQFLKSVDQLTLKDIADFTSK 475
Query: 460 LLSSPLTMASYGDVINVPSYDAVSSKFK 487
++S PLTM S+GDV+ VPSYD +SSKF+
Sbjct: 476 VISKPLTMGSFGDVLAVPSYDTISSKFR 503
>sp|O04308|MPPA2_ARATH Probable mitochondrial-processing peptidase subunit alpha-2
OS=Arabidopsis thaliana GN=MPPA2 PE=1 SV=1
Length = 499
Score = 541 bits (1395), Expect = e-153, Method: Compositional matrix adjust.
Identities = 311/508 (61%), Positives = 382/508 (75%), Gaps = 30/508 (5%)
Query: 1 MYRNAASRLRALKGHVRCRVPSATRFASSSAVASTSSSSGGLFSWLTGERSSSSPSLDFP 60
MYR AASR +ALKG + A+R+ASSSAVA++SSSS SWL+G SSS PS++ P
Sbjct: 1 MYRTAASRAKALKGILNHNF-RASRYASSSAVATSSSSS----SWLSGGYSSSLPSMNIP 55
Query: 61 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGT 120
L GVSLPP L D+VEP K K +TLPNG+ IA+E S +P ASI LYV CGSIYE+P G
Sbjct: 56 LAGVSLPPPLSDHVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGA 115
Query: 121 THLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM------ 174
THLLERMAF+ST NRSH R+VRE+EAIGGN ASASREQMGY+ DALKTYVPEM
Sbjct: 116 THLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLID 175
Query: 175 ---------------LTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINR 219
L KVK EI E + NP LLEA+HSAGYSGALANPL APESAI
Sbjct: 176 SVRNPAFLDWEVNEELRKVKVEIGEFATNPMGFLLEAVHSAGYSGALANPLYAPESAITG 235
Query: 220 LNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY 279
L +LE FV ENYT RMVLAASGV+H++L+ V EPLLSDLP++ EPKS Y GGD+
Sbjct: 236 LTGEVLENFVFENYTASRMVLAASGVDHEELLKVVEPLLSDLPNVPRPAEPKSQYVGGDF 295
Query: 280 RCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 339
R +G + THF LAFE+P GW+ +K+A+ TVLQML+GGGGSFSAGGPGKGM+S LY
Sbjct: 296 RQH--TGGEATHFALAFEVP-GWNNEKEAIIATVLQMLMGGGGSFSAGGPGKGMHSWLYL 352
Query: 340 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQ 399
R+LN+ Q QS +AF++++N++G+FGI G T +F S+ I+L A E+ +VA G+V+Q
Sbjct: 353 RLLNQHQQFQSCTAFTSVFNNTGLFGIYGCTSPEFASQGIELVASEMNAVAD-GKVNQKH 411
Query: 400 LDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQK 459
LDRAK +TKSAILMNLESRM+ +EDIGRQ+LTYGERKPV+ FLKTV+ +T KDIA K
Sbjct: 412 LDRAKAATKSAILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTSK 471
Query: 460 LLSSPLTMASYGDVINVPSYDAVSSKFK 487
+++ PLTMA++GDV+NVPSYD+VS +F+
Sbjct: 472 VITKPLTMATFGDVLNVPSYDSVSKRFR 499
>sp|P11914|MPPA_YEAST Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS2 PE=1
SV=1
Length = 482
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 151/444 (34%), Positives = 234/444 (52%), Gaps = 51/444 (11%)
Query: 80 KISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLR 139
K+S+L NG+K+A+ + +++ LY+ GS +E G TH+L+R+AF+ST +
Sbjct: 20 KLSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEGRA 79
Query: 140 IVREVEAIGGNVQASASREQMGYSFDALKTYVPEMLT---------------------KV 178
+ +E +GGN Q ++SRE + Y V +ML
Sbjct: 80 MAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSETVRFPKITEQELQEQKLSA 139
Query: 179 KSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPR 237
+ EI EV P+ +L E +H+A YSG L +PL+ P I ++ L ++ + YT
Sbjct: 140 EYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRELIPSISKYYLLDYRNKFYTPEN 199
Query: 238 MVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPK-SVYTGGDYRCQADS---GD--QLTH 291
V A GV H++ + + E L D S HP K + YTGG+ C + G+ +L H
Sbjct: 200 TVAAFVGVPHEKALELTEKYLGDWQSTHPPITKKVAQYTGGE-SCIPPAPVFGNLPELFH 258
Query: 292 FVLAFE-LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQS 350
+ FE LP D L LQ LLGGGGSFSAGGPGKGMYSRLY VLN++ V++
Sbjct: 259 IQIGFEGLP---IDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYFVEN 315
Query: 351 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGE--VDQVQLDRAKQSTK 408
AF++ Y+ SG+FGI + +A+++ A+++ + + + + ++ RAK K
Sbjct: 316 CVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLK 375
Query: 409 SAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMA 468
S++LMNLES++V ED+GRQVL +G + PV + +E + DI+ VA+ + + + A
Sbjct: 376 SSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVAEMIFTGNVNNA 435
Query: 469 ----------------SYGDVINV 476
S+GDV NV
Sbjct: 436 GNGKGRATVVMQGDRGSFGDVENV 459
>sp|Q5R513|MPPA_PONAB Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii
GN=PMPCA PE=2 SV=2
Length = 525
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 230/471 (48%), Gaps = 45/471 (9%)
Query: 60 PLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISF 118
PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 47 PLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLS 106
Query: 119 GTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDA----LKTYV-- 171
G H LE++AF ST R S I+ +E GG SR+ Y+ A L T V
Sbjct: 107 GIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGL 166
Query: 172 -----------------PEMLTKVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAP 213
M + + E + +P+ LL E IH A Y + P
Sbjct: 167 LADVVLQPRLTDEEVEMTRMTVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCP 226
Query: 214 ESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSV 273
I ++N +L ++ YT RMVLA GVEH+ LV A L + E +
Sbjct: 227 TENIAKINREVLHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGIQPAWGSAEAVDI 286
Query: 274 ------YTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVLQMLL 318
YTGG + + D + +LTH ++ E ++D + VL M++
Sbjct: 287 DRSVAQYTGGIAKRERDMSNVSLGPTPIPELTHIMVGLE--SCSFLEEDFIPFAVLNMMM 344
Query: 319 GGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKA 378
GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I + V +
Sbjct: 345 GGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREM 404
Query: 379 IDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPV 438
+++ +E I ++ G VD V+L+RAK S ++MNLESR V+ ED+GRQVL RK
Sbjct: 405 VEIITKEFILMS--GTVDAVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLP 462
Query: 439 EHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAVSSKFKSK 489
+ V +D+ VA K+L +A+ GD+ ++P+Y+ + + SK
Sbjct: 463 HELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSK 513
>sp|Q10713|MPPA_HUMAN Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens
GN=PMPCA PE=1 SV=2
Length = 525
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 154/471 (32%), Positives = 237/471 (50%), Gaps = 45/471 (9%)
Query: 60 PLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISF 118
PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 47 PLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLS 106
Query: 119 GTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDA----LKTYVPE 173
G H LE++AF ST R S I+ +E GG SR+ Y+ A L T V
Sbjct: 107 GIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVAL 166
Query: 174 M--------LTKVKSEISEVS-----------NNPQSLLLEAIHSAGY-SGALANPLLAP 213
+ LT + E++ ++ +P+ LL E IH A Y + P
Sbjct: 167 LADVVLQPRLTDEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCP 226
Query: 214 ESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEP-LLSDLPSIHPREE--- 269
+ ++N +L ++ YT RMVLA GVEH+ LV A LL P+ E
Sbjct: 227 TENVAKINREVLHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDI 286
Query: 270 PKSV--YTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVLQMLL 318
+SV YTGG + + D + +LTH ++ E ++D + VL M++
Sbjct: 287 DRSVAQYTGGIAKLERDMSNVSLGPTPIPELTHIMVGLE--SCSFLEEDFIPFAVLNMMM 344
Query: 319 GGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKA 378
GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I + V +
Sbjct: 345 GGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREM 404
Query: 379 IDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPV 438
+++ +E I + G VD V+L+RAK S ++MNLESR V+ ED+GRQVL RK
Sbjct: 405 VEIITKEFILMG--GTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLP 462
Query: 439 EHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAVSSKFKSK 489
+ V +D+ VA K+L +A+ GD+ ++P+Y+ + + SK
Sbjct: 463 HELCTLIRNVKPEDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSK 513
>sp|Q0P5M8|MPPA_BOVIN Mitochondrial-processing peptidase subunit alpha OS=Bos taurus
GN=PMPCA PE=2 SV=1
Length = 525
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/472 (31%), Positives = 232/472 (49%), Gaps = 47/472 (9%)
Query: 60 PLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISF 118
PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 47 PLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLS 106
Query: 119 GTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDA----LKTYV-- 171
G H LE++AF ST R S I+ +E GG SR+ Y+ A L T V
Sbjct: 107 GIAHFLEKLAFSSTERFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGL 166
Query: 172 -----------------PEMLTKVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAP 213
M + + E + +P+ LL E +H A Y + P
Sbjct: 167 LADVVLHPRLTDEEIEMARMAVQFELEDLNMRPDPEPLLTEMVHEAAYRENTVGLHRFCP 226
Query: 214 ESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEP-LLSDLPS------IHP 266
+ +++ +L ++ YT RMVLA GVEH QLV A LL P+ +H
Sbjct: 227 AENVGKMDRDVLHAYLRNYYTPDRMVLAGVGVEHAQLVECARKYLLGTCPAWGTGAAVHV 286
Query: 267 REEPKSVYTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVLQML 317
+ + YTGG + + D + +LTH ++ E + D + VL M+
Sbjct: 287 -DRSVAQYTGGIVKLERDMSNVSLGPTPFPELTHIMIGLE--SCSFLEGDFIPFAVLNMM 343
Query: 318 LGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSK 377
+GGGGSFSAGGPGKGM++RLY VLN + + +++ + Y +G+ I + V +
Sbjct: 344 MGGGGSFSAGGPGKGMFTRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVRE 403
Query: 378 AIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKP 437
+++ RE + +A G VD V+L+RAK S ++MNLE+R V+ ED+GRQVL RK
Sbjct: 404 MVEIVTREFVLMA--GTVDVVELERAKTQLTSMLMMNLEARPVIFEDVGRQVLATRSRKL 461
Query: 438 VEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAVSSKFKSK 489
+ V +DI VA K+L +A+ GD+ +P+Y+ V + S+
Sbjct: 462 PHELCALIRDVKPEDIKRVASKMLRGKPAVAALGDLSELPAYEHVQAALASR 513
>sp|P22695|QCR2_HUMAN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens
GN=UQCRC2 PE=1 SV=3
Length = 453
Score = 185 bits (470), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 203/426 (47%), Gaps = 38/426 (8%)
Query: 80 KISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLR 139
+ + LPNG+ IAS + SPV+ I L++ GS YE + GTTHLL + +T+ S +
Sbjct: 39 EFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFK 98
Query: 140 IVREVEAIGGNVQASASREQMGYSFDALK-------------TYVPE--------MLTKV 178
I R +EA+GG + +A+RE M Y+ + L+ T PE + ++
Sbjct: 99 ITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQL 158
Query: 179 KSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRM 238
K + + NPQ+ ++E +H+A Y ALANPL P+ I ++ S L FV ++T RM
Sbjct: 159 KIDKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRIGKVTSEELHYFVQNHFTSARM 218
Query: 239 VLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLAFEL 298
L GV H L VAE L+ + K+ Y GG+ R Q +GD L H AF
Sbjct: 219 ALIGLGVSHPVLKQVAEQFLNMRGGL-GLSGAKANYRGGEIREQ--NGDSLVH--AAFVA 273
Query: 299 PGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIY 358
+A +VLQ +LG G G S L++ V Q SAF+ Y
Sbjct: 274 ESAVAGSAEANAFSVLQHVLGAGPHVK---RGSNTTSHLHQAVAKATQQPFDVSAFNASY 330
Query: 359 NHSGMFGI----QGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMN 414
+ SG+FGI Q T D + AA + G + + AK K+ LM+
Sbjct: 331 SDSGLFGIYTISQATAAGDVIK-----AAYNQVKTIAQGNLSNTDVQAAKNKLKAGYLMS 385
Query: 415 LESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVI 474
+ES E++G Q L G P L+ ++ V DI + A+K +S +MA+ G++
Sbjct: 386 VESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQKSMAASGNLG 445
Query: 475 NVPSYD 480
+ P D
Sbjct: 446 HTPFVD 451
>sp|P97997|MPPA_BLAEM Mitochondrial-processing peptidase subunit alpha OS=Blastocladiella
emersonii PE=3 SV=1
Length = 474
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/431 (31%), Positives = 227/431 (52%), Gaps = 44/431 (10%)
Query: 79 TKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
T ++ LP+G+++A+ S S A++ +YV G IYE+ I G +H + +AF+ST +
Sbjct: 15 TCMTRLPSGIRVATAPSNSHFAAVGVYVDAGPIYETSIDRGVSHFVSSLAFKSTHGATES 74
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVP---------------------EMLTK 177
++++ + +GGN+ +A+RE + Y L +P E
Sbjct: 75 QVLKTMAGLGGNLFCTATRESILYQGSVLHHDLPRTVQLLADTTLRPALTEEEIAERRAT 134
Query: 178 VKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLA-PESAINRLNSTLLEEFVAENYTG 235
+ E ++ + P + + E +H+ + G L N + P+ A N + T+ E F Y
Sbjct: 135 IAFEAEDLHSRPDAFIGEMMHAVAFGGRGLGNSIFCEPQRARNMTSDTIREYFA--TYLH 192
Query: 236 P-RMVLAASGVEHDQLVSVAE----PLLSDLPSIHPREEPKSVYTGGDYR--------CQ 282
P RMV+A +GV H +LV + P + PS + ++ Y GG ++
Sbjct: 193 PSRMVVAGTGVAHAELVDLVSKAFVPSSTRAPSSVTHSDIETAYVGGSHQLVIPKPPPTH 252
Query: 283 ADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVL 342
+ LTH +AF +P H D ++ LQ+L+GGGG+FSAGGPGKGMYSRLY VL
Sbjct: 253 PNYEQTLTHVQVAFPVPPFTHPDM--FPVSTLQVLMGGGGAFSAGGPGKGMYSRLYTNVL 310
Query: 343 NEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDR 402
N + ++S +AF + Y+ + +FGI + F ++ A E + +A + ++ R
Sbjct: 311 NRYRWMESCAAFQHAYSSTSLFGISASCVPSFNPHLCNVLAGEFVHMAR--NLSDEEVAR 368
Query: 403 AKQSTKSAILMNLESRMVVSEDIGRQVLTYGER-KPVEHFLKTVEGVTAKDIASVAQKLL 461
AK KS++LMNLES+++ EDIGRQVL +R +P+E + + VT D+ VA+ L+
Sbjct: 369 AKNQLKSSLLMNLESQVITVEDIGRQVLAQNQRLEPLE-LVNNISAVTRDDLVRVAEALV 427
Query: 462 SSPLTMASYGD 472
+ P TM + G+
Sbjct: 428 AKPPTMVAVGE 438
>sp|Q9DC61|MPPA_MOUSE Mitochondrial-processing peptidase subunit alpha OS=Mus musculus
GN=Pmpca PE=1 SV=1
Length = 524
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 227/471 (48%), Gaps = 45/471 (9%)
Query: 60 PLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISF 118
PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 46 PLPGVPKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLS 105
Query: 119 GTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDA----LKTYVP- 172
G H LE++AF ST R S I+ +E GG SR+ Y+ A L T V
Sbjct: 106 GIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDL 165
Query: 173 ------------------EMLTKVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAP 213
M + + E + +P+ LL E IH A + + P
Sbjct: 166 LADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCP 225
Query: 214 ESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDL------PSIHPR 267
I +++ +L ++ YT RMVLA GVEH+ LV A L P
Sbjct: 226 VENIAKIDREVLHSYLKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDV 285
Query: 268 EEPKSVYTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVLQMLL 318
+ + YTGG + + D + +LTH ++ E + D + VL M++
Sbjct: 286 DRSVAQYTGGIIKVERDMSNVSLGPTPIPELTHIMVGLE--SCSFLEDDFIPFAVLNMMM 343
Query: 319 GGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKA 378
GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I + V +
Sbjct: 344 GGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREM 403
Query: 379 IDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPV 438
+++ +E I + VD V+L+RAK S ++MNLESR V+ ED+GRQVL RK
Sbjct: 404 VEIITKEFILMGR--TVDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLP 461
Query: 439 EHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAVSSKFKSK 489
+ V +DI VA K+L +A+ GD+ ++P+Y+ + + S+
Sbjct: 462 HELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHIQAALSSR 512
>sp|Q3SZ71|MPPB_BOVIN Mitochondrial-processing peptidase subunit beta OS=Bos taurus
GN=PMPCB PE=2 SV=1
Length = 490
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 214/439 (48%), Gaps = 39/439 (8%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 58 ETRVTCLENGLRVASEDSGLATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 117
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVP---EMLTKVKS-------------- 180
L + E+E +G ++ A SREQ Y A +P E+L +
Sbjct: 118 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 177
Query: 181 ----EISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 235
E+ EV N Q ++ + +H+ Y AL +L P I +N L +++ +Y G
Sbjct: 178 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKG 237
Query: 236 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 291
PR+VLAA+ GV HD+L+ +A+ + S H E P +TG + R + D L H
Sbjct: 238 PRIVLAAAGGVSHDELLELAKFHFGESLSTHKGEIPALPPCKFTGSEIRVRDDKM-PLAH 296
Query: 292 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 350
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 297 LAVAVEAVGWAH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 350
Query: 351 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 410
F +F+ Y +G++GI V+ + + +E + + T V + ++ RAK K+
Sbjct: 351 FQSFNTSYTDTGLWGIYMVCEPATVADMLHVVQKEWMRLCTS--VTESEVARAKNLLKTN 408
Query: 411 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL--SSPLTMA 468
+L+ L+ + EDIGRQ+L Y R P+ ++ V A+ I V K + SP +A
Sbjct: 409 MLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAEIIREVCTKYIYDKSP-AVA 467
Query: 469 SYGDVINVPSYDAVSSKFK 487
+ G + +P ++ + S +
Sbjct: 468 AVGPIEQLPDFNQICSNMR 486
>sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta
OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2
Length = 531
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 221/444 (49%), Gaps = 46/444 (10%)
Query: 78 KTKISTLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
+T+++TLPNG+++A+E+++S A++ +++ GS +ES + GT H LE M F+ T R+
Sbjct: 96 ETRVTTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKGTDRRT 155
Query: 137 HLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMLTKVKS---------------- 180
+ E+E IGG++ A SREQ Y L + V + L +
Sbjct: 156 VRALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQRINRER 215
Query: 181 -----EISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 234
E+ EV ++L+ +H+ + L +L P + + L+ ++ +YT
Sbjct: 216 DVILREMQEVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSITREDLQNYIKTHYT 275
Query: 235 GPRMVLAASG-VEHDQLVSVAEPLLSDL---PSIHPR---EEPKSVYTGGDYRCQADSGD 287
RMV+AA+G V+H+++V + L + L P+ + EP S +TG + R D
Sbjct: 276 ASRMVIAAAGAVKHEEVVEQVKKLFTKLSSDPTTTSQLVANEPAS-FTGSEVRM-IDDDL 333
Query: 288 QLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRV-LNEFP 346
L F +AFE G D D++ L V+Q +LG GG G S L +RV +NE
Sbjct: 334 PLAQFAVAFE--GASWTDPDSVALMVMQTMLGSWNKNVGGGKHVG--SDLTQRVAINEI- 388
Query: 347 QVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQS 406
+S AF+ Y +G+FG+ +D + E+ +A V + RA+
Sbjct: 389 -AESIMAFNTNYKDTGLFGVYAVAKADCLDDLSYAIMYEVTKLAY--RVSDADVTRARNQ 445
Query: 407 TKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQK-LLSSPL 465
KS++L++++ ++EDIGRQ+LTYG R P ++ V A + VA K + +
Sbjct: 446 LKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDI 505
Query: 466 TMASYGDVINVPSYDAVSSKFKSK 489
+++ G + ++P Y+ KF+ +
Sbjct: 506 AISAIGPIQDLPDYN----KFRRR 525
>sp|P32551|QCR2_RAT Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus
norvegicus GN=Uqcrc2 PE=1 SV=2
Length = 452
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 212/442 (47%), Gaps = 32/442 (7%)
Query: 60 PLPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFG 119
P S P +P ++P + + + LPNG+ IAS + +P++ I L++ GS YE+ G
Sbjct: 20 PKLKTSAPGGVP--LQPQELEFTKLPNGLVIASLENYAPLSRIGLFIKAGSRYENYNYLG 77
Query: 120 TTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALK----------- 168
T+HLL + +T+ S +I R +EA+GG + +A+RE M Y+ + ++
Sbjct: 78 TSHLLRLASTLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEILMEFLL 137
Query: 169 --TYVPE--------MLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAIN 218
T PE + +++K + + NPQ+ ++E +H Y ALANPL P+ +
Sbjct: 138 NVTTAPEFRRWEVAALRSQLKIDKAVAFQNPQTRIIENLHDVAYKNALANPLYCPDYRMG 197
Query: 219 RLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGD 278
++ S L FV ++T RM L GV H L VAE L+ + K+ Y GG+
Sbjct: 198 KITSEELHYFVQNHFTSARMALVGLGVSHSILKEVAEQFLNIRGGL-GLAGAKAKYRGGE 256
Query: 279 YRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLY 338
R Q +GD L H + E + + +A +VLQ LLG G G S L
Sbjct: 257 IREQ--NGDNLVHAAIVAESAAIGNAEANA--FSVLQHLLGAGPHIK---RGNNTTSLLS 309
Query: 339 RRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQV 398
+ V Q SAF+ Y+ SG+FGI + + I+ A ++ +VA G +
Sbjct: 310 QSVAKGSQQPFDVSAFNASYSDSGLFGIYTVSQAAAAGDVINAAYNQVKAVAQ-GNLSSA 368
Query: 399 QLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQ 458
+ AK K+ LM++E+ +IG Q L G P L+ ++ V D+ A+
Sbjct: 369 DVQAAKNKLKAGYLMSVETSEGFLSEIGSQALATGSYMPPPTVLQQIDAVADADVVKAAK 428
Query: 459 KLLSSPLTMASYGDVINVPSYD 480
K +S +M + G++ + P D
Sbjct: 429 KFVSGKKSMTASGNLGHTPFLD 450
>sp|Q9DB77|QCR2_MOUSE Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus
GN=Uqcrc2 PE=1 SV=1
Length = 453
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/435 (29%), Positives = 210/435 (48%), Gaps = 32/435 (7%)
Query: 67 PPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLER 126
P +P ++P + + LPNG+ IAS + +P++ I L+V GS YE + GT+HLL
Sbjct: 28 PGGVP--LQPQDLEFTKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRL 85
Query: 127 MAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALK-------------TYVPE 173
+ +T+ S +I R +EA+GG + +A+RE M Y+ + ++ T PE
Sbjct: 86 ASSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPE 145
Query: 174 --------MLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLL 225
+ +++K + + N Q+ ++E +H Y ALANPL P+ + ++ S L
Sbjct: 146 FRRWEVAALRSQLKIDKAVAFQNSQTRIIENLHDVAYKNALANPLYCPDYRMGKITSEEL 205
Query: 226 EEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADS 285
FV ++T RM L GV H L VAE L ++ K+ Y GG+ R Q +
Sbjct: 206 HYFVQNHFTSARMALVGLGVSHSVLKQVAEQFL-NMRGGLGLAGAKAKYRGGEIREQ--N 262
Query: 286 GDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 345
GD L H + E + + +A +VLQ LLG G G S L + V
Sbjct: 263 GDNLVHAAIVAESAAIGNAEANA--FSVLQHLLGAGPHIK---RGNNTTSLLSQSVAKGS 317
Query: 346 PQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQ 405
Q SAF+ Y+ SG+FGI + + + I+ A ++ +VA G + + AK
Sbjct: 318 HQPFDVSAFNASYSDSGLFGIYTISQAAAAGEVINAAYNQVKAVAQ-GNLSSADVQAAKN 376
Query: 406 STKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPL 465
K+ LM++E+ +IG Q L G P L+ ++ V D+ A+K +S
Sbjct: 377 KLKAGYLMSVETSEGFLSEIGSQALAAGSYMPPSTVLQQIDSVADADVVKAAKKFVSGKK 436
Query: 466 TMASYGDVINVPSYD 480
+MA+ G++ + P D
Sbjct: 437 SMAASGNLGHTPFLD 451
>sp|O75439|MPPB_HUMAN Mitochondrial-processing peptidase subunit beta OS=Homo sapiens
GN=PMPCB PE=1 SV=2
Length = 489
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 212/438 (48%), Gaps = 39/438 (8%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L +G+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVP---EMLTKVKS-------------- 180
L + E+E +G ++ A SREQ Y A +P E+L +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 181 ----EISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 235
E+ EV N Q ++ + +H+ Y AL +L P I ++ L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 236 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 291
PR+VLAA+ GV HD+L+ +A+ D H E P +TG + R + D L H
Sbjct: 237 PRIVLAAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKM-PLAH 295
Query: 292 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 350
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 296 LAIAVEAVGWAH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 349
Query: 351 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 410
F +F+ Y +G++G+ S V+ + + +E + + T V + ++ RA+ K+
Sbjct: 350 FQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTS--VTESEVARARNLLKTN 407
Query: 411 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL--SSPLTMA 468
+L+ L+ + EDIGRQ+L Y R P+ ++ V A+ I V K + SP +A
Sbjct: 408 MLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIA 466
Query: 469 SYGDVINVPSYDAVSSKF 486
+ G + +P + + S
Sbjct: 467 AVGPIKQLPDFKQIRSNM 484
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit beta OS=Pongo abelii
GN=PMPCB PE=2 SV=1
Length = 489
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 211/438 (48%), Gaps = 39/438 (8%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L +G+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVP---EMLTKVKS-------------- 180
L + E+E +G ++ A SREQ Y A +P E+L +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 181 ----EISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 235
E+ EV N Q ++ + +H+ Y AL +L P I ++ L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 236 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 291
PR+VLAA+ GV HD+L+ +A+ D H E P +TG + R + D L H
Sbjct: 237 PRIVLAAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKM-PLAH 295
Query: 292 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 350
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 296 LAIAVEAVGWAH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 349
Query: 351 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 410
F +F+ Y +G++G+ V+ + + +E + + T V + ++ RA+ K+
Sbjct: 350 FQSFNTSYTDTGLWGLYMVCEPSTVADMLHVVQKEWMRLCTS--VTESEVARARNLLKTN 407
Query: 411 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL--SSPLTMA 468
+L+ L+ + EDIGRQ+L Y R P+ ++ V A+ I V K + SP +A
Sbjct: 408 MLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP-AIA 466
Query: 469 SYGDVINVPSYDAVSSKF 486
+ G + +P + + S
Sbjct: 467 AVGPIEQLPDFKQICSNM 484
>sp|Q03346|MPPB_RAT Mitochondrial-processing peptidase subunit beta OS=Rattus
norvegicus GN=Pmpcb PE=1 SV=3
Length = 489
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 212/439 (48%), Gaps = 39/439 (8%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVP---EMLTKVKS-------------- 180
L + E+E +G ++ A SREQ Y A +P E+L +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 181 ----EISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 235
E+ EV N Q ++ + +H+ Y AL +L P I ++ L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 236 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 291
PR+VLAA+ GV H++L+ +A+ D H + P +TG + R + D L H
Sbjct: 237 PRIVLAAAGGVCHNELLELAKFHFGDSLCAHKGDVPALPPCKFTGSEIRVRDDKM-PLAH 295
Query: 292 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 350
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 296 LAVAIEAVGWTH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 349
Query: 351 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 410
F +F+ Y +G++G+ V+ + +E + + T V + ++ RAK K+
Sbjct: 350 FQSFNTSYTDTGLWGLYMVCEQATVADMLHAVQKEWMRLCTA--VSESEVARAKNLLKTN 407
Query: 411 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL--SSPLTMA 468
+L+ L+ + EDIGRQ+L Y R P+ ++ V A+ + V K + SP +A
Sbjct: 408 MLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAEMVREVCTKYIYGKSP-AIA 466
Query: 469 SYGDVINVPSYDAVSSKFK 487
+ G + +P ++ + S +
Sbjct: 467 ALGPIERLPDFNQICSNMR 485
>sp|Q9CXT8|MPPB_MOUSE Mitochondrial-processing peptidase subunit beta OS=Mus musculus
GN=Pmpcb PE=2 SV=1
Length = 489
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 214/443 (48%), Gaps = 47/443 (10%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETQVTCLENGLRVASENSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVP---EMLTKVKS-------------- 180
L + E+E +G ++ A SREQ Y A +P E+L +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 181 ----EISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 235
E+ EV N Q ++ + +H+ Y AL +L P I +N L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKG 236
Query: 236 PRMVLAAS-GVEHDQLVSVAEPLLSD--------LPSIHPREEPKSVYTGGDYRCQADSG 286
PR+VLAA+ GV H++L+ +A+ D +P++ P +TG + R + D
Sbjct: 237 PRIVLAAAGGVCHNELLELAKFHFGDSLCSHKGAIPAL-----PPCKFTGSEIRVRDDKM 291
Query: 287 DQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFP 346
L H +A E G H D + L V L+G S GG G + S+L + +
Sbjct: 292 -PLAHLAIAVEAVGWAH--PDTICLMVANTLIGNWDR-SFGG-GMNLSSKLAQLTCHG-N 345
Query: 347 QVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQS 406
SF +F+ Y +G++G+ V+ + + E + T +V + ++ RAK
Sbjct: 346 LCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHVVQNEWKRLCT--DVTESEVARAKNL 403
Query: 407 TKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL--SSP 464
K+ +L+ L+ + EDIGRQ+L Y R P+ ++ V A+ + V K + SP
Sbjct: 404 LKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAETVRRVCTKYIHDKSP 463
Query: 465 LTMASYGDVINVPSYDAVSSKFK 487
+A+ G + +P ++ + S +
Sbjct: 464 -AIAALGPIERLPDFNQICSNMR 485
>sp|P20069|MPPA_RAT Mitochondrial-processing peptidase subunit alpha OS=Rattus
norvegicus GN=Pmpca PE=1 SV=1
Length = 524
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 229/478 (47%), Gaps = 59/478 (12%)
Query: 60 PLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISF 118
PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 46 PLPGVPKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTLGILINSGSRYEAKYLS 105
Query: 119 GTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDA----LKTYV-- 171
G H LE++AF ST R S I+ +E GG SR+ Y+ A L T V
Sbjct: 106 GIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGL 165
Query: 172 -----------------PEMLTKVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAP 213
M + + E + +P+ LL E IH A + + P
Sbjct: 166 LADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCP 225
Query: 214 ESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEP-LLSDLPSIHPREEPKS 272
I +++ +L ++ YT RMVLA GVEH+ LV A LL P+ P +
Sbjct: 226 VENIGKIDREVLHSYLKNYYTPDRMVLAGVGVEHEHLVECARKYLLGVQPAW---GAPGA 282
Query: 273 VYT---------GGDYR----CQADSGD----QLTHFVLAFELPGGWHK----DKDAMTL 311
V+ GG R CQ + Q +H GG + ++D +
Sbjct: 283 VWMLTAQWHSTRGGSSRWRETCQMSALRPPRFQSSHIY------GGARELLLLEEDFIPF 336
Query: 312 TVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTG 371
VL M++GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I +
Sbjct: 337 AVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASAD 396
Query: 372 SDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLT 431
V + +++ +E I + VD V+L+RAK S ++MNLESR V+ ED+GRQVL
Sbjct: 397 PRQVREMVEIITKEFILMGR--TVDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLA 454
Query: 432 YGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAVSSKFKSK 489
RK + V +DI VA K+L +A+ GD+ ++P+Y+ + + S+
Sbjct: 455 THSRKLPHELCTLIRNVKPEDIKRVASKMLRGKPAVAALGDLTDLPTYEHIQAALSSR 512
>sp|Q4W6B5|MPPB_DICDI Mitochondrial-processing peptidase subunit beta OS=Dictyostelium
discoideum GN=mppB PE=1 SV=1
Length = 469
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/446 (30%), Positives = 213/446 (47%), Gaps = 45/446 (10%)
Query: 71 PDYVEPG-KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAF 129
P Y++ +TKI+TL NG+++A+E + VAS+ ++V GS+YE+ + G H LE M F
Sbjct: 26 PSYLKISPETKITTLSNGIRVATEQTYGEVASVGVWVDSGSVYETDKNNGVAHFLEHMIF 85
Query: 130 RSTRNR-SHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVP-------EMLTKVKSE 181
+ T R + I E+E +GG++ A SRE Y LK VP ++L K E
Sbjct: 86 KGTAKRPTPQSIETEIENMGGSLNAFTSREHSAYYMKVLKDNVPNAVDILSDILQNSKFE 145
Query: 182 ISEVSNNPQSLL--------------LEAIHSAGYSG-ALANPLLAPESAINRLNSTLLE 226
S + ++L + +H+A + G AL +L P I + ++
Sbjct: 146 TSLIEQERDTILSENDYIQSKEDEVVFDQLHAAAFQGSALGRTILGPVENIKSITREQIQ 205
Query: 227 EFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSV-----YTGGDYR 280
EF+ ENYTG R+V++A+G V H+QLV + +++ ++ K + G + R
Sbjct: 206 EFINENYTGDRLVISAAGAVNHEQLVEQVKEKFANVKMSQVSKDVKRAAITNDFIGSELR 265
Query: 281 CQADSGDQLTHFVLAFE-LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 339
+ D L HF +A LP W D D L ++Q ++G A GK + S L
Sbjct: 266 VRDDE-QPLIHFAVAVRALP--W-TDPDYFVLELIQTMIGNWNRGIAA--GKNIASNLGE 319
Query: 340 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQ 399
V E +S+S F Y +G+FG G + V + +E +AT ++V+
Sbjct: 320 IVATE-DLAESYSTFFTCYQDTGLFGNYGVCQPERVDDLVAEMLKEWQRIATSCNKNEVE 378
Query: 400 LDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGER-KPVEHFLKTVEGVTAKDIASVAQ 458
R KQ + LM + V E IGRQ+LT G R P E + + E +T D+ VA
Sbjct: 379 --RNKQKLLATTLMQYDGTSKVCEGIGRQILTLGRRLSPFEVYTRINE-ITVADVQRVAS 435
Query: 459 KLLS--SPLTMASYGDVINVPSYDAV 482
LL SP A G + N P Y+ V
Sbjct: 436 TLLRDVSPAVTA-IGPIANYPDYNFV 460
>sp|P43264|QCR1_EUGGR Ubiquinol-cytochrome-c reductase complex core protein I,
mitochondrial OS=Euglena gracilis PE=2 SV=1
Length = 494
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 203/425 (47%), Gaps = 54/425 (12%)
Query: 82 STLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIV 141
+ LPNG +IASE+ ++ +++ GS +E+ + G H LE M F+ T RS I
Sbjct: 30 NALPNGFRIASESKDGDTCTVGVWIDAGSRWETEKNNGVAHFLEHMNFKGTGKRSRQDIE 89
Query: 142 REVEAIGGNVQASASREQMGYSFDALKTYVPEML---------------------TKVKS 180
+E +G ++ A SRE Y K VPE + +
Sbjct: 90 FGMEKMGAHLNAYTSREHTCYYVKCFKKDVPEAVDILADILLNSKRTEQDLDAERQTIVQ 149
Query: 181 EISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINR-LNSTLLEEFVAENYTGPRM 238
E +V +L++ +HSA + G+ L +L P I + + ++++FV +YTGPRM
Sbjct: 150 EKEDVEARIDEVLMDHLHSAAFEGSGLGLSILGPLENIQKSITKGMIDDFVKTHYTGPRM 209
Query: 239 VLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLAFE 297
L SG V+H QL +A LP+ P+ + + GGD R + + + LTH +AF+
Sbjct: 210 ALVGSGAVDHGQLCDLASKYFGALPTGQPKPSGFTRFLGGDKR-ETNQLNPLTHVAVAFQ 268
Query: 298 LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF--PQV------- 348
PG H DA+ + VL+ LL GS+S G+ YS R ++ +F P+V
Sbjct: 269 TPGISH--PDAIKIKVLEQLL---GSYSR-DKGEAAYSCFARAIVMDFYDPKVGQFFRPN 322
Query: 349 -------QSFSAFSNIYNHSGMFGIQ-----GTTGSDFVSKAIDLAARELISVATPGEVD 396
S +AF Y+ G+ G G + + A RELI V+ +
Sbjct: 323 KAGHNPIHSLNAFWAPYSDVGLLGFYAIAEPGKSYGHEWENILHYAMRELIRVSR--NIS 380
Query: 397 QVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASV 456
+ + +RAK K ++ L+ +++DIGRQVL++G R P+ F + ++ ++ +D+ V
Sbjct: 381 EEEFERAKNQLKLQTMLQLDGTTNIADDIGRQVLSFGARVPLASFFEQLDAISREDLIRV 440
Query: 457 AQKLL 461
++L
Sbjct: 441 GPRVL 445
>sp|P23004|QCR2_BOVIN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus
GN=UQCRC2 PE=1 SV=2
Length = 453
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 209/435 (48%), Gaps = 32/435 (7%)
Query: 67 PPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLER 126
P +P + P + + LPNG+ IAS + +P + I L++ GS YE+ + GT+HLL
Sbjct: 28 PAGVPPH--PQDLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRL 85
Query: 127 MAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVP---EMLTKVKS--- 180
+ +T+ S +I R +EA+GG + +++RE M Y+ + L+ V E L V +
Sbjct: 86 ASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPE 145
Query: 181 ----EISEVS-----------NNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLL 225
E++ + NPQ+ ++E +H+A Y ALAN L P+ I ++ L
Sbjct: 146 FRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAYRNALANSLYCPDYRIGKVTPVEL 205
Query: 226 EEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADS 285
++V ++T RM L GV H L VAE L+ + K+ Y GG+ R Q +
Sbjct: 206 HDYVQNHFTSARMALIGLGVSHPVLKQVAEQFLNIRGGL-GLSGAKAKYHGGEIREQ--N 262
Query: 286 GDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 345
GD L H L E + +A +VLQ +LG G G S LY+ V
Sbjct: 263 GDSLVHAALVAESAAIGSAEANA--FSVLQHVLGAGPHVKRGSNAT---SSLYQAVAKGV 317
Query: 346 PQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQ 405
Q SAF+ Y+ SG+FG + + I A ++ ++A G + + AK
Sbjct: 318 HQPFDVSAFNASYSDSGLFGFYTISQAASAGDVIKAAYNQVKTIAQ-GNLSNPDVQAAKN 376
Query: 406 STKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPL 465
K+ LM++ES +++G Q L G P L+ ++ V D+ + A+K +S
Sbjct: 377 KLKAGYLMSVESSEGFLDEVGSQALAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRK 436
Query: 466 TMASYGDVINVPSYD 480
+MA+ G++ + P D
Sbjct: 437 SMAASGNLGHTPFID 451
>sp|Q68FY0|QCR1_RAT Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus
norvegicus GN=Uqcrc1 PE=1 SV=1
Length = 480
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 211/440 (47%), Gaps = 46/440 (10%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T++S L NG+++ASE S P ++ +++ GS YE+ + G + LE +AF+ T+NR
Sbjct: 47 ETQVSVLDNGLRVASEQSSHPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPG 106
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVP---EMLTKVKSEIS----------- 183
+ +EVE+IG ++ A ++RE Y AL +P E+L + IS
Sbjct: 107 NALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNISLEDSQIEKERD 166
Query: 184 ----EVSNNP---QSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 235
E+ N Q+++ + +H+ + G LA + P + RL+ T L ++++ +Y
Sbjct: 167 VILREMQENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLSRHYKA 226
Query: 236 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPKSV----YTGGDYRCQADSGDQLT 290
PRMVLAA+ GV+H QL+ +A+ S + ++ + S+ +TG + R D L
Sbjct: 227 PRMVLAAAGGVKHQQLLDLAQDHFSSVSQVYEEDAVPSITPCRFTGSEIR-HRDDALPLA 285
Query: 291 HFVLAFELPGGWHKDKDAMTLTVLQMLLGG-----GGSFSAGGPGKGMYSRLYRRVLNEF 345
H +A E P GW + D + L V ++G GG P + V N+
Sbjct: 286 HVAIAVEGP-GW-ANPDNVALQVANAIIGHYDCTYGGGVHLSSPLASV------AVANKL 337
Query: 346 PQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQ 405
QSF F+ Y+ +G+ G + + I + + + T +V R K
Sbjct: 338 --CQSFQTFNISYSETGLLGAHFVCDAMSIDDMIFFLQGQWMRLCTSATESEVT--RGKN 393
Query: 406 STKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPL 465
++A++ +L+ V EDIGR +LTYG R P+ + +E V A+ + V K
Sbjct: 394 ILRNALISHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIEEVDAQMVREVCSKYFYDQC 453
Query: 466 -TMASYGDVINVPSYDAVSS 484
+A YG + + Y+ + S
Sbjct: 454 PAVAGYGPIEQLSDYNRIRS 473
>sp|O94745|MPPA_SCHPO Probable mitochondrial-processing peptidase subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mas2 PE=3 SV=2
Length = 502
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 207/422 (49%), Gaps = 39/422 (9%)
Query: 75 EPGKTKIST--LPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRST 132
+P ++ T L NGV + + + +YV GS YE+ G +H ++R+AF++T
Sbjct: 48 DPALNEVRTEKLKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQAT 107
Query: 133 RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM-----------------L 175
+ ++E +GGN S SRE M Y V M L
Sbjct: 108 ERTPVGEMKAKLENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKIQEDDL 167
Query: 176 TKVKSEI----SEVSNNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVA 230
+ I SE+ P +LL E H + + L N LL +N + +T + E++
Sbjct: 168 VHYRDSIIYENSELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVNGITATSIREYLK 227
Query: 231 ENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPS--IHPREEPKSVYTGGDYRCQADSG-- 286
Y + LA +G+ + + + L LPS + P E S YTGG +
Sbjct: 228 YFYRPEHLTLAYAGIPQEIAKEITKELYGHLPSSSLPPLEAIPSHYTGGFMGIKKSEAPP 287
Query: 287 ----DQLTHFVLAFE-LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRV 341
+ TH V+A E LP D D L LQ LLGGGGSFSAGGPGKGMYSRLY V
Sbjct: 288 VPYQQEFTHVVIAMEGLPV---TDPDIYALACLQFLLGGGGSFSAGGPGKGMYSRLYLNV 344
Query: 342 LNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLD 401
LN++P V++ AF++ Y SG+FG+ T D A L REL + V + +
Sbjct: 345 LNQYPWVETCMAFNHSYTDSGLFGMFVTILDDAAHLAAPLIIRELCNTVL--SVTSEETE 402
Query: 402 RAKQSTKSAILMNLESRMVVSEDIGRQVLTY-GERKPVEHFLKTVEGVTAKDIASVAQKL 460
RAK KS++LMNLESRM+ ED+GRQ+ T G + ++ ++ +T D++ VA+++
Sbjct: 403 RAKNQLKSSLLMNLESRMISLEDLGRQIQTQNGLYITPKEMIEKIDALTPSDLSRVARRV 462
Query: 461 LS 462
L+
Sbjct: 463 LT 464
>sp|Q9CZ13|QCR1_MOUSE Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus
GN=Uqcrc1 PE=1 SV=2
Length = 480
Score = 161 bits (408), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 210/440 (47%), Gaps = 46/440 (10%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T++S L NG+++ASE S ++ +++ GS YE+ + G + LE +AF+ T+NR
Sbjct: 47 ETQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPG 106
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVP---EMLTKVKS-------------- 180
+ +EVE+IG ++ A ++RE Y AL +P E+L +
Sbjct: 107 NALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSLEDSQIEKERD 166
Query: 181 ----EISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 235
E+ E + Q+++ + +H+ + G LA + P + RL+ T L +++ +Y
Sbjct: 167 VILREMQENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLNRHYKA 226
Query: 236 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPKSV----YTGGDYRCQADSGDQLT 290
PRMVLAA+ GVEH QL+ +A+ LS + ++ + + +TG + R D L
Sbjct: 227 PRMVLAAAGGVEHQQLLDLAQKHLSSVSRVYEEDAVPGLTPCRFTGSEIR-HRDDALPLA 285
Query: 291 HFVLAFELPGGWHKDKDAMTLTVLQMLLGG-----GGSFSAGGPGKGMYSRLYRRVLNEF 345
H +A E P GW + D +TL V ++G GG P + V N+
Sbjct: 286 HVAIAVEGP-GW-ANPDNVTLQVANAIIGHYDCTYGGGVHLSSPLASV------AVANKL 337
Query: 346 PQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQ 405
QSF F+ Y+ +G+ G + + + + + + T +V R K
Sbjct: 338 --CQSFQTFNISYSDTGLLGAHFVCDAMSIDDMVFFLQGQWMRLCTSATESEVT--RGKN 393
Query: 406 STKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPL 465
++A++ +L+ V EDIGR +LTYG R P+ + ++ V A+ + + K
Sbjct: 394 ILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIQEVDAQMLRDICSKYFYDQC 453
Query: 466 -TMASYGDVINVPSYDAVSS 484
+A YG + +P Y+ + S
Sbjct: 454 PAVAGYGPIEQLPDYNRIRS 473
>sp|P11913|MPPB_NEUCR Mitochondrial-processing peptidase subunit beta OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=pep PE=1 SV=1
Length = 476
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 208/434 (47%), Gaps = 40/434 (9%)
Query: 78 KTKISTLPNGVKIASETS-VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
KT+ +TL NG+ +AS+ S + +++ +++ GS E+ + GT H LE +AF+ T R+
Sbjct: 39 KTQTTTLKNGLTVASQYSPYAQTSTVGMWIDAGSRAETDETNGTAHFLEHLAFKGTTKRT 98
Query: 137 HLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMLTKVKS---------------- 180
++ E+E +G ++ A SRE Y AL VP+ + ++
Sbjct: 99 QQQLELEIENMGAHLNAYTSRENTVYFAKALNEDVPKCVDILQDILQNSKLEESAIERER 158
Query: 181 -----EISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 234
E EV + ++ + +H+ Y L +L P I + T L ++ NYT
Sbjct: 159 DVILRESEEVEKQLEEVVFDHLHATAYQHQPLGRTILGPRENIRDITRTELVNYIKNNYT 218
Query: 235 GPRMVL-AASGVEHDQLVSVAEPLLSDLPSIHP------REEPKSVYTGGDYRCQADSGD 287
RMVL A GV H+QLV +A+ S LP+ P + K + G D R + D+
Sbjct: 219 ADRMVLVGAGGVPHEQLVEMADKYFSKLPATAPVSSASILSKKKPDFIGSDIRIRDDT-- 276
Query: 288 QLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQ 347
+ +A + G D D T V Q ++G P +G S+L V ++
Sbjct: 277 -IPTANIAIAVEGVSWSDDDYFTGLVTQAIVGNYDKALGNAPHQG--SKLSGFV-HKHDL 332
Query: 348 VQSFSAFSNIYNHSGMFGIQGTTGS-DFVSKAIDLAARELISVATPGEVDQVQLDRAKQS 406
SF +FS Y+ +G++GI T D V + + RE + + V + +++RAK
Sbjct: 333 ATSFMSFSTSYSDTGLWGIYLVTDKLDRVDDLVHFSLREWTRLCS--NVSEAEVERAKAQ 390
Query: 407 TKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVA-QKLLSSPL 465
K++IL++L+ V+EDIGRQ++T G R + ++ V+AKD+ A +K+ +
Sbjct: 391 LKASILLSLDGTTAVAEDIGRQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKIWDQDI 450
Query: 466 TMASYGDVINVPSY 479
+++ G + + Y
Sbjct: 451 AISAVGSIEGLFDY 464
>sp|P31800|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus
GN=UQCRC1 PE=1 SV=2
Length = 480
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 202/440 (45%), Gaps = 46/440 (10%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T++S L NG+++ASE S P ++ +++ GS YES + G + +E +AF+ T+NR
Sbjct: 47 ETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPG 106
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVP---EMLTKVK--------------- 179
+ +EVE++G ++ A ++RE Y AL +P E+L +
Sbjct: 107 NALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERD 166
Query: 180 ---SEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 235
E+ E + + ++ +H+ + G LA + P + +L+ L E+++ +Y
Sbjct: 167 VILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKA 226
Query: 236 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPKSV----YTGGDYRCQADSGDQLT 290
PRMVLAA+ G+EH QL+ +A+ S L + + ++ +TG C + G L
Sbjct: 227 PRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQI-CHREDGLPLA 285
Query: 291 HFVLAFELPGGWHKDKDAMTLTV-----LQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 345
H +A E PG H D A+ + GGG S+ ++L
Sbjct: 286 HVAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKL-------- 337
Query: 346 PQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQ 405
QSF F+ Y +G+ G + + + + + + T +V R K
Sbjct: 338 --CQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCTSATESEVL--RGKN 393
Query: 406 STKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPL 465
++A++ +L+ V EDIGR +LTYG R P+ + + V A+ + V K
Sbjct: 394 LLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYFYDQC 453
Query: 466 -TMASYGDVINVPSYDAVSS 484
+A +G + +P Y+ + S
Sbjct: 454 PAVAGFGPIEQLPDYNRIRS 473
>sp|P31930|QCR1_HUMAN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens
GN=UQCRC1 PE=1 SV=3
Length = 480
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 205/441 (46%), Gaps = 48/441 (10%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T++S L NG+++ASE S P ++ +++ GS +E+ + G + LE +AF+ T+NR
Sbjct: 47 ETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPG 106
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVP---EMLTKVKSEIS----------- 183
+ +EVE++G ++ A ++RE Y AL +P E+L + S
Sbjct: 107 SALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKERD 166
Query: 184 ----EVSNNPQSL---LLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 235
E+ N S+ + +H+ + G LA + P + +L+ L E+++ +Y
Sbjct: 167 VILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKA 226
Query: 236 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPKSV----YTGGDYRCQADSGDQLT 290
PRMVLAA+ GVEH QL+ +A+ L +P + + ++ +TG + R D
Sbjct: 227 PRMVLAAAGGVEHQQLLDLAQKHLGGIPWTYAEDAVPTLTPCRFTGSEIR-HRDDALPFA 285
Query: 291 HFVLAFELPGGWHKDKDAMTLTVLQMLLG------GGGSFSAGGPGKGMYSRLYRRVLNE 344
H +A E P GW D + L V ++G GGG + G V N+
Sbjct: 286 HVAIAVEGP-GW-ASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGA-------VANK 336
Query: 345 FPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAK 404
QSF FS Y +G+ G + + + + + + T +V R K
Sbjct: 337 L--CQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVA--RGK 392
Query: 405 QSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSP 464
++A++ +L+ V EDIGR +LTYG R P+ + + V A + + K +
Sbjct: 393 NILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYDQ 452
Query: 465 L-TMASYGDVINVPSYDAVSS 484
+A YG + +P Y+ + S
Sbjct: 453 CPAVAGYGPIEQLPDYNRIRS 473
>sp|P10507|MPPB_YEAST Mitochondrial-processing peptidase subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS1 PE=1
SV=1
Length = 462
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 208/446 (46%), Gaps = 44/446 (9%)
Query: 76 PGKTKISTLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRN 134
PG T+ S LPNG+ IA+E + A++ ++V GS E+ + GT H LE +AF+ T+N
Sbjct: 24 PG-TRTSKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGTQN 82
Query: 135 RSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVP-------EMLTK---------- 177
RS I E+E IG ++ A SRE Y +L+ +P ++LTK
Sbjct: 83 RSQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVLDNSAIER 142
Query: 178 ----VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAEN 232
+ E EV ++ + +H Y L +L P I + T L++++ +N
Sbjct: 143 ERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKN 202
Query: 233 YTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIH-------PREEPKSVYTGGDYRCQAD 284
Y G RMVLA +G V+H++LV A+ +P PR P V+ G+ R +
Sbjct: 203 YKGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPR-GPLPVFCRGE-RFIKE 260
Query: 285 SGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNE 344
+ TH +A E G D Q ++G A G G S L
Sbjct: 261 NTLPTTHIAIALE--GVSWSAPDYFVALATQAIVGNWD--RAIGTGTNSPSPLAVAASQN 316
Query: 345 FPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISV---ATPGEVDQVQLD 401
S+ +FS Y SG++G+ T S+ + L E++ G++ +++
Sbjct: 317 GSLANSYMSFSTSYADSGLWGMYIVTDSN--EHNVQLIVNEILKEWKRIKSGKISDAEVN 374
Query: 402 RAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQ-KL 460
RAK K+A+L++L+ + EDIGRQV+T G+R E + V+ +T DI A +L
Sbjct: 375 RAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRL 434
Query: 461 LSSPLTMASYGDVINVPSYDAVSSKF 486
+ P++M + G+ VP+ + K
Sbjct: 435 QNKPVSMVALGNTSTVPNVSYIEEKL 460
>sp|Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes
GN=mppB PE=3 SV=1
Length = 466
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 211/447 (47%), Gaps = 49/447 (10%)
Query: 79 TKISTLPNGVKIASETS-VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
T+ISTL NG+ +A+E+ + A++ +++ GS E+ + GT H LE MAF+ T RS
Sbjct: 29 TEISTLSNGLTVATESQPHAQTATVGVWIDAGSRAETDKTNGTAHFLEHMAFKGTGRRSQ 88
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVP-------EMLTKVK----------- 179
+ EVE IG ++ A SREQ Y + VP ++L K
Sbjct: 89 HALELEVENIGAHLNAYTSREQTVYYAKSFSKDVPVAVDIISDILQNSKLESGAIERERD 148
Query: 180 ---SEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 235
E EV + ++ + +H+ + G L +L P++ I + L ++ NYT
Sbjct: 149 VILREQQEVDKQLEEVVFDHLHAVAFQGQPLGRTILGPKNNILSIQRDDLASYIQTNYTA 208
Query: 236 PRMVLAASG-VEHDQLVSVAEPLLSDLP-SIHP------REEPKSVYTGGDYRCQADSGD 287
RMVL +G V+H LV +AE S LP S +P E K + G + R + D
Sbjct: 209 DRMVLVGTGGVDHQSLVKLAEKHFSSLPVSANPLALGRLSSERKPTFVGSEARIR---DD 265
Query: 288 QLTHFVLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFP 346
+L +A + G GW D + V+Q + G ++ + S +++
Sbjct: 266 ELPTAHVAIAVEGVGW-SSPDYFPMMVMQSIFG---NWDRSLGASSLLSSRLSHIISSNS 321
Query: 347 QVQSFSAFSNIYNHSGMFGIQGTTGSDF-VSKAIDLAAREL--ISVA-TPGEVDQVQLDR 402
SF +FS Y+ +G++GI + + + + +E +S+A T GEV+ R
Sbjct: 322 LANSFMSFSTSYSDTGLWGIYLVSENLMNLDDTLHFTLKEWTRMSIAPTEGEVE-----R 376
Query: 403 AKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQK-LL 461
AK K+ +L++L+ V+EDIGRQ++T G+R V+ V+ DI VAQK L
Sbjct: 377 AKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRVAQKYLW 436
Query: 462 SSPLTMASYGDVINVPSYDAVSSKFKS 488
+A++G++ + Y + + S
Sbjct: 437 DKDFALAAFGNIDGLKDYGRIRNDMSS 463
>sp|Q00302|MPPB_BLAEM Mitochondrial-processing peptidase subunit beta OS=Blastocladiella
emersonii GN=MPP1 PE=3 SV=1
Length = 465
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 212/435 (48%), Gaps = 38/435 (8%)
Query: 78 KTKISTLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
KT+++ LPNG+ +A+E++ + A++ +++ GS E+ + G H LE ++F+ T+ R+
Sbjct: 34 KTQVTRLPNGLTVATESNPALATATVGVWIDSGSRAETKANNGVAHFLEHISFKGTKQRT 93
Query: 137 HLRIVREVEAIGGNVQASASREQMGY-----SFDALK------------TYVPEMLTKVK 179
+ E+E +GG++ A SREQ Y S D K T P + + +
Sbjct: 94 QSGLEIEIENMGGHLNAYTSREQTVYYAKLFSQDVAKGVNILGDILQNSTLDPGAIDRER 153
Query: 180 S----EISEVSNNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVAENYT 234
+ E EV + ++ + +H+A + AL +L P+ I L+ L+ ++ NYT
Sbjct: 154 AVILREAEEVDKQVEEVVFDHLHAAAFPENALGYTILGPKENIQTLSQADLQAYIKNNYT 213
Query: 235 GPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREE-PKSVYTGGDYRCQADSGDQLT-H 291
RMV+ +G V+H +L +AE LP + + + +TG D R + D D T H
Sbjct: 214 ADRMVVVGAGNVDHAELCKLAETNFGKLPQGSGKAKFVRPAFTGSDVRIRVD--DMPTAH 271
Query: 292 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSF 351
LA E G D L V ++ GS+ G S +++ + SF
Sbjct: 272 IALAVE--GASWTSADHWPLLVASAMI---GSYDRAA-GNAHPSSKLAQIVAKHNLANSF 325
Query: 352 SAFSNIYNHSGMFGIQ-GTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 410
++F+ Y+ +G++GI + D + RE + +AT +V + AKQ K++
Sbjct: 326 TSFNTTYSDTGLWGIYIQSNNRDNLDDLAHFTVREWMRLATAPSEGEVAI--AKQQLKTS 383
Query: 411 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL-SSPLTMAS 469
+L+ L+ V+E+IGRQ+L YG R + V+ VT +D+ VA + + L + +
Sbjct: 384 LLLALDGTTPVAEEIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANEFIYDRDLAIVA 443
Query: 470 YGDVINVPSYDAVSS 484
G V +P Y+ + S
Sbjct: 444 VGPVECLPDYNRIRS 458
>sp|Q54F93|MPPA2_DICDI Mitochondrial-processing peptidase subunit alpha-2 OS=Dictyostelium
discoideum GN=mppA2 PE=1 SV=1
Length = 445
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 210/435 (48%), Gaps = 44/435 (10%)
Query: 82 STLPNGVKIASETS--VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLR 139
+TL NG+K+ S P S+ LY+ GS E+ + G +L+ +AF S N+ +
Sbjct: 25 TTLSNGLKVVSLVGGYTGPAVSLGLYIKTGSRNETQETAGLNQVLKGLAFESNTNKLGIE 84
Query: 140 IVREVEAIGGNVQASASREQMGYSFDALKTYVPEMLTKVKS------------EISEV-- 185
+ R++E G A ASR+ + + L +ML + + +++E+
Sbjct: 85 VQRDIEVSGSTAFAQASRDNLLIALQTLPNRSLQMLNNLANITKPTLPYHEVRDVTEIIV 144
Query: 186 ------SNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRM 238
+++ S + E++H + G L PL+AP + + + +V Y M
Sbjct: 145 KESEAYNHDSYSSIFESVHQTAFRGKTLGRPLVAPICNLGNITKDAVTNWVNSTYKPSNM 204
Query: 239 VLAASGVEHDQLVSVAEPLL--SDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLAF 296
+L G+ H++L+ AE + +D S E Y GG+ + SG+ + VLAF
Sbjct: 205 ILVGVGLSHNELIEEAEKVTFGNDESSTSISNETAQ-YIGGE-SLKYSSGN--SKVVLAF 260
Query: 297 ELPGGWHKD-KDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 355
E G + KD +VLQ +LG G +A PG G SRL+ N V S AF+
Sbjct: 261 E--GTAQSNIKDVAAFSVLQSILGNGCPKTA--PGHGRTSRLFSLTKNNSNIVNS-EAFN 315
Query: 356 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVA-TPGEVDQVQLDRAKQSTKSAILMN 414
Y SG+FG+ V K + L E+++ + T G+ +L+RAK TKS++L
Sbjct: 316 LTYGDSGLFGVVAEVEGATVGKTVSLITSEIVAASKTAGQ----ELERAKAVTKSSVLEQ 371
Query: 415 LESRMVVSEDIGRQVLTYGER--KPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGD 472
ESR E IG+Q + Y ++ P E F + + VT++DI VA+K+ S T+ GD
Sbjct: 372 AESRTSALEFIGKQAI-YTDKVLTPAE-FAEEISKVTSEDIKRVAKKMTSKKPTLVVVGD 429
Query: 473 VINVPSYDAVSSKFK 487
V + P+ ++V S+ K
Sbjct: 430 VSDAPTIESVQSQLK 444
>sp|Q9P7X1|MPPB_SCHPO Probable mitochondrial-processing peptidase subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr1 PE=2 SV=1
Length = 457
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 214/445 (48%), Gaps = 53/445 (11%)
Query: 78 KTKISTLPNGVKIASETS-VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
KT+ +TL NG+ +A+E + A++ + V GS E+ + G H LE +AF+ T+NRS
Sbjct: 21 KTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKNRS 80
Query: 137 HLRIVREVEAIGGNVQASASREQMGYSFDALKTYVP-------EMLTK------------ 177
+ E E G ++ A SREQ Y A K VP ++LT
Sbjct: 81 QKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSISASAVERER 140
Query: 178 --VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 234
+ E EV ++ + +H+ Y G L +L P+ I L L +++ +NY
Sbjct: 141 QVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPKENIESLTREDLLQYIKDNYR 200
Query: 235 GPRMVLAASG-VEHDQLVSVAEPLLSDL-PSIH------PRE-EPKSVYTGGDYRCQADS 285
RM+++++G + H++LV +AE L PS PR +P+ + G + R + D
Sbjct: 201 SDRMIISSAGSISHEELVKLAEKYFGHLEPSAEQLSLGAPRGLKPR--FVGSEIRARDDD 258
Query: 286 GDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 345
+A + G K D T V+Q ++G A G + SRL ++ +
Sbjct: 259 SPTAN---IAIAVEGMSWKHPDYFTALVMQAIIGNWDR--AMGASPHLSSRL-STIVQQH 312
Query: 346 PQVQSFSAFSNIYNHSGMFGIQGTTGS-----DFVSKAIDLAARELISVATPGEVDQVQL 400
SF +FS Y+ +G++GI T + D V + AR ++VAT EV+
Sbjct: 313 QLANSFMSFSTSYSDTGLWGIYLVTENLGRIDDLVHFTLQNWAR--LTVATRAEVE---- 366
Query: 401 DRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKL 460
RAK ++++L++L+S ++EDIGRQ+LT G R + + +T KD+A VA ++
Sbjct: 367 -RAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARVASEM 425
Query: 461 L-SSPLTMASYGDVINVPSYDAVSS 484
+ + +++ G + + Y+ + S
Sbjct: 426 IWDKDIAVSAVGSIEGLLDYNRIRS 450
>sp|Q4UML9|Y338_RICFE Uncharacterized zinc protease RF_0338 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0338 PE=3 SV=1
Length = 412
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 188/418 (44%), Gaps = 46/418 (11%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
IS L NG+ + + V VA I+L GS YE+ G +H LE MAF+ T R+
Sbjct: 7 ISKLKNGLTVLTYNMPYVDSVA-INLITKVGSRYENSEEEGISHFLEHMAFKGTTTRTAK 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALK-----------------TYVPEMLTK---- 177
+I E + IGG+ A E+ Y L + E + K
Sbjct: 66 QIAEEFDEIGGHFNAYTGHEKTIYYARVLSENCDKALNILADIIQNSIFAEEEIAKEYQV 125
Query: 178 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 236
+ EI+ +NP L+ E +S+ Y L P+L ++ F+ ++Y
Sbjct: 126 ILQEIAHSQDNPDDLIYEKFYSSVYKDQPLGKPILGASKTLSSFTKEHFLSFIDKHYNAG 185
Query: 237 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 295
+ L+ +G V+HD++VS AE L S L + Y GG+ D + T +L
Sbjct: 186 NLYLSVAGNVDHDKIVSSAERLFSSLKQGEKSNFLPAKYIGGNSFINKDL--EQTTLILG 243
Query: 296 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 355
FE G + + + + T L ++ GGG M SRL++ + + + +++
Sbjct: 244 FE--GTPYINLERLYRTQLLAIIFGGG----------MSSRLFQHIREKLGLAYAVGSYN 291
Query: 356 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATP--GEVDQVQLDRAKQSTKSAILM 413
+ Y+ SG+F I +T D ++L +EL + T +V++ ++ RAK +S +LM
Sbjct: 292 STYSDSGVFTIYASTAHD----KLELLYKELKTEITKMTEKVNEEEMIRAKTQLRSNLLM 347
Query: 414 NLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 471
E SE+IG+ +G+ P E ++ + + A DI + A K+ SS T A G
Sbjct: 348 AQEKVAYKSEEIGKNYAAFGKYIPPEEIMEIITNIKADDIINTANKIFSSITTSAIIG 405
>sp|O86835|Y5738_STRCO Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=SCO5738 PE=3
SV=1
Length = 459
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 185/420 (44%), Gaps = 53/420 (12%)
Query: 77 GKTKISTLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNR 135
G + +TLP G++I +ET S A+ ++ GS E+P G TH LE + F+ TR R
Sbjct: 33 GTVRRTTLPGGLRIVTETLPSVRSATFGIWAHVGSRDETPALNGATHYLEHLLFKGTRKR 92
Query: 136 SHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVP-------EMLT------------ 176
S L I ++A+GG + A ++E Y L T +P +MLT
Sbjct: 93 SALDISSAIDAVGGEMNAFTAKEYTCYYARVLDTDLPLAIDVVCDMLTGSLIQEEDVDVE 152
Query: 177 --KVKSEISEVSNNPQSLLLEAI-HSAGYSGALANPLLAPESAINRLNSTLLEEFVAENY 233
+ EI+ ++P + + H+ AL P+L +N L + + F ++Y
Sbjct: 153 RGAILEEIAMTEDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIRRFYRKHY 212
Query: 234 TGPRMVLAASG-VEHDQLV-----------SVAEPLLSDLPSIHPREEPKSVYTGGDYRC 281
+V+AA+G V+H+++V ++ +P L PR ++V G
Sbjct: 213 DPTHLVVAAAGNVDHNKVVRQVRAAFEKSGALKDPAAQPLA---PRAGRRTVRAAGRVEL 269
Query: 282 QADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRV 341
+Q H +L +PG D+ + VL LGG GM SRL++ V
Sbjct: 270 IGRKTEQ-AHVILG--MPGLARTDERRWAMGVLNTALGG-----------GMSSRLFQEV 315
Query: 342 LNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLD 401
+ S ++++ + G+FG+ V + + EL VA G D ++
Sbjct: 316 REKRGLAYSVYSYTSGFADCGLFGVYAGCRPSQVHDVLKICRDELDHVAEHGLTDD-EIG 374
Query: 402 RAKQSTKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL 461
RA + + ++ LE + IG+ L +GE+ V+ L + VT D+ +VA+ +L
Sbjct: 375 RAVGQLQGSTVLGLEDTGALMNRIGKSELCWGEQMSVDDMLARIASVTPDDVRAVARDVL 434
>sp|Q1RJ61|Y522_RICBR Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain
RML369-C) GN=RBE_0522 PE=3 SV=1
Length = 412
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 183/418 (43%), Gaps = 46/418 (11%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
+S L NG+ I + V+ VA I+L GS YE+P G H LE MAF+ T+ R+
Sbjct: 7 VSKLKNGLTILTYNMPYVNSVA-INLIAKVGSRYENPGEEGIAHFLEHMAFKGTKTRTAK 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDAL-----------------KTYVPEMLTK---- 177
+I E ++IGG+ A E+ Y L + E + K
Sbjct: 66 QIAEEFDSIGGHFNAYTGHEKTVYYSRVLSENCNKALAIIADIVQNSAFAEEEIAKEYQV 125
Query: 178 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 236
+ EI+ +NP L+ E +++ + L P+L I N +F ++Y
Sbjct: 126 ILQEIAHAQDNPDDLVYEKFYNSVFKDQPLGKPILGTSKTIETFNRDHFLKFTGKHYNAE 185
Query: 237 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 295
L+ +G V+H+++V AE L S L + Y GG D + T +L
Sbjct: 186 NFYLSIAGNVDHEEIVKEAERLFSSLTQGEKSNFSPAKYIGGHSFINKDL--EQTTLILG 243
Query: 296 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 355
FE G + + + + T L ++ GG GM SRL++ + + + +++
Sbjct: 244 FE--GTSYINLERLYQTQLLAIIFGG----------GMSSRLFQHIREKLGLAYAVGSYN 291
Query: 356 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVAT--PGEVDQVQLDRAKQSTKSAILM 413
+ Y SG+F I +T D ++L A EL + +V Q +++RA+ +S + M
Sbjct: 292 SPYFDSGVFTIYASTAHD----KLELLAAELKNEIKRMAEQVKQEEIERARTQIRSNLQM 347
Query: 414 NLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 471
E SE+IG+ +G+ E ++ + + A DI A ++ SS T A G
Sbjct: 348 AQEKVAYKSEEIGKNYAVFGKYISPEEIMEIIMNIKAADIIQTANRIFSSSATSAVIG 405
>sp|P0A5S9|Y2805_MYCBO Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2805c PE=3 SV=1
Length = 438
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 187/421 (44%), Gaps = 48/421 (11%)
Query: 82 STLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
+TLP G+++ +E AS+ ++VG GS E G H LE + F+ST RS + I
Sbjct: 18 TTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDI 77
Query: 141 VREVEAIGGNVQASASREQMGYSFDALKTYVPEMLTKVKS-------------------- 180
+ ++A+GG + A ++E Y L + +P + V
Sbjct: 78 AQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVL 137
Query: 181 -EISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGPRM 238
EI+ ++P+ L + +A + + P++ +++ + L+ F YT RM
Sbjct: 138 EEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERM 197
Query: 239 VLAASG-VEHDQLVSVAEP-----LLSDLPSIHPREEPKSVYTGGDYRCQADSGD-QLTH 291
V+AA+G V+HD LV++ L+ + PR+ V G R S D + TH
Sbjct: 198 VVAAAGNVDHDGLVALVREHFGSRLVRGRRPVAPRKGTGRV--NGSPRLTLVSRDAEQTH 255
Query: 292 FVLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQS 350
L PG GW + L+VL LGG G+ SRL++ V S
Sbjct: 256 VSLGIRTPGRGW---EHRWALSVLHTALGG-----------GLSSRLFQEVRETRGLAYS 301
Query: 351 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 410
+ +++ SG + + + + + A L SVA G + + + AK S +
Sbjct: 302 VYSALDLFADSGALSVYAACLPERFADVMRVTADVLESVARDG-ITEAECGIAKGSLRGG 360
Query: 411 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASY 470
+++ LE +GR L YG+ + +EH L+ +E VT +++ +VA+ LLS A
Sbjct: 361 LVLGLEDSSSRMSRLGRSELNYGKHRSIEHTLRQIEQVTVEEVNAVARHLLSRRYGAAVL 420
Query: 471 G 471
G
Sbjct: 421 G 421
>sp|P0A5S8|Y2782_MYCTU Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium
tuberculosis GN=Rv2782c PE=3 SV=1
Length = 438
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 187/421 (44%), Gaps = 48/421 (11%)
Query: 82 STLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
+TLP G+++ +E AS+ ++VG GS E G H LE + F+ST RS + I
Sbjct: 18 TTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDI 77
Query: 141 VREVEAIGGNVQASASREQMGYSFDALKTYVPEMLTKVKS-------------------- 180
+ ++A+GG + A ++E Y L + +P + V
Sbjct: 78 AQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDVVL 137
Query: 181 -EISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGPRM 238
EI+ ++P+ L + +A + + P++ +++ + L+ F YT RM
Sbjct: 138 EEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPERM 197
Query: 239 VLAASG-VEHDQLVSVAEP-----LLSDLPSIHPREEPKSVYTGGDYRCQADSGD-QLTH 291
V+AA+G V+HD LV++ L+ + PR+ V G R S D + TH
Sbjct: 198 VVAAAGNVDHDGLVALVREHFGSRLVRGRRPVAPRKGTGRV--NGSPRLTLVSRDAEQTH 255
Query: 292 FVLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQS 350
L PG GW + L+VL LGG G+ SRL++ V S
Sbjct: 256 VSLGIRTPGRGW---EHRWALSVLHTALGG-----------GLSSRLFQEVRETRGLAYS 301
Query: 351 FSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSA 410
+ +++ SG + + + + + A L SVA G + + + AK S +
Sbjct: 302 VYSALDLFADSGALSVYAACLPERFADVMRVTADVLESVARDG-ITEAECGIAKGSLRGG 360
Query: 411 ILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASY 470
+++ LE +GR L YG+ + +EH L+ +E VT +++ +VA+ LLS A
Sbjct: 361 LVLGLEDSSSRMSRLGRSELNYGKHRSIEHTLRQIEQVTVEEVNAVARHLLSRRYGAAVL 420
Query: 471 G 471
G
Sbjct: 421 G 421
>sp|P98080|UCR1_CAEEL Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis
elegans GN=ucr-1 PE=3 SV=2
Length = 471
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 212/465 (45%), Gaps = 50/465 (10%)
Query: 51 SSSSPSLDFPLPGVSLPPSLPDYVEPG-KTKISTLPNGVKIASETSVSPVASISLYVGCG 109
S+ P+L+ + S S+ D + + +++TL NG ++ +E + S A++ +++ G
Sbjct: 9 SALRPALNSQVRNASSAVSVKDVLASAPQAEVTTLKNGFRVVTEDNGSATATVGVWIETG 68
Query: 110 SIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDA--- 166
S +E+ + G H LER+ + T R+ + E+ AIG + + R+Q A
Sbjct: 69 SRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGAKLNSFTERDQTAVFVQAGAQ 128
Query: 167 ----LKTYVPEMLTKVKSEIS-------------EVSNNPQSLLL-EAIHSAGYSGA-LA 207
+ + ++L K E S E S++ L+L + +H+AG+ G LA
Sbjct: 129 DVEKVVDILADVLRNSKLEASTIDTERVNLLKELEASDDYHQLVLFDMLHAAGFQGTPLA 188
Query: 208 NPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPR 267
+L +I +++ L+E+ ++Y RMVL+A G + S+A+ DL + +PR
Sbjct: 189 LSVLGTSESIPNISAQQLKEWQEDHYRPVRMVLSAVGGGVSNVSSLADKYFGDLSNEYPR 248
Query: 268 EEPK---SVYTGGDYRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSF 324
+ P+ + +TG +YR + D + H AF + G + KDA+ L + +G
Sbjct: 249 KVPQVDGTRFTGSEYRYR---NDNVPHMYAAFAVEGVGYAHKDALALQIANQFIGQWDVT 305
Query: 325 SAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDL--- 381
A + SRL +++ ++ V + F+ Y +G+FGI FV+ A DL
Sbjct: 306 HA--TSRTAASRLVQKIGHDHG-VHNLQHFNINYKDTGLFGIY------FVADAHDLNDT 356
Query: 382 ------AARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSEDIGRQVLTYGER 435
A E +A+ ++V + AK ++ + NLE+ + +++L G
Sbjct: 357 SGIMKSVAHEWKHLASAATEEEVAM--AKNQFRTNLYQNLETNTQKAGFNAKELLYTGNL 414
Query: 436 KPVEHFLKTVEGVTAKDI-ASVAQKLLSSPLTMASYGDVINVPSY 479
+ + ++ V A + ++++ + L G P+Y
Sbjct: 415 RQLSELEAQIQKVDAGAVREAISRHVYDRDLAAVGVGRTEAFPNY 459
>sp|O32965|Y855_MYCLE Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae
(strain TN) GN=ML0855 PE=3 SV=1
Length = 445
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 184/420 (43%), Gaps = 46/420 (10%)
Query: 82 STLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
+TLP G+++ +E AS+ ++VG GS E G H LE + F+ST R+ + I
Sbjct: 25 TTLPGGLRVVTEHLPAVRSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTSTRTAMDI 84
Query: 141 VREVEAIGGNVQASASREQMGYSFDALKT-------YVPEMLTK--------------VK 179
+ ++A+GG + A ++E Y L + V +++ V
Sbjct: 85 AQAIDAVGGELNAFTAKEHTCYYAHVLDSDLELAVDLVADVVLNGRCAVDDVELERDVVL 144
Query: 180 SEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGPRM 238
EI+ ++P+ L + +A + + P++ +++ + T L F YT RM
Sbjct: 145 EEIAMRDDDPEDALGDMFLAALFGDHPVGRPVIGTMESVSAMTRTQLHSFHVRRYTPERM 204
Query: 239 VLAASG-VEHDQLVSVAEP-----LLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHF 292
V+A +G V+HD++V++ L+ S PR+ + GG + TH
Sbjct: 205 VVAVAGNVDHDEMVALVREHFGSRLIRGRQSAPPRKSTGRI-NGGPALTLGKRDAEQTHV 263
Query: 293 VLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSF 351
+L PG W + L+VL LGG G+ SRL++ + S
Sbjct: 264 LLGVRTPGRSW---EHRWALSVLHTALGG-----------GLSSRLFQEIRETRGLAYSV 309
Query: 352 SAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAI 411
+ +I+ SG + + + + + L SVA G + + + AK S + I
Sbjct: 310 YSALDIFADSGALSVYAACLPGRFADVMQVISEVLASVAGDG-ITEAECRIAKGSLRGGI 368
Query: 412 LMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 471
++ LE +GR L YG+ + +EH L+ ++ VT + + ++A +LL+ A G
Sbjct: 369 ILGLEDSNSWMSRLGRSELNYGKYRGIEHTLQQIDEVTVEQVNALAHQLLNKRYGAAVLG 428
>sp|P23955|MPPA_NEUCR Mitochondrial-processing peptidase subunit alpha OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=mpp PE=1 SV=2
Length = 577
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 289 LTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQV 348
TH LAFE G D D L LQ LLGGGGSFSAGGPGKGMYSRLY VLN+ V
Sbjct: 356 FTHIQLAFE--GLAISDDDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTNVLNQHGWV 413
Query: 349 QSFSAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATP---GEVDQVQLDRAKQ 405
+S AF++ Y SG+FGI + + + REL ++ T + ++++ RAK
Sbjct: 414 ESCVAFNHSYTDSGLFGIAASCYPGRTLPMLQVMCRELHALTTDHGYSALGELEVSRAKN 473
Query: 406 STKSAILMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLL 461
+S++LMNLESRMV ED+GRQV +G + PV + + +T KD+ VA++++
Sbjct: 474 QLRSSLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRVAKRVV 529
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 112/206 (54%), Gaps = 22/206 (10%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+ I+TL NGV++ASE + + +Y+ GS YE+ G +H+++R+AF+ST R+
Sbjct: 51 RDNITTLSNGVRVASEDLPDAFSGVGVYIDAGSRYENDYVRGASHIMDRLAFKSTSTRTA 110
Query: 138 LRIVREVEAIGGNVQASASREQMGY---SFD-ALKTYVPEMLTKVKS------------- 180
++ VE +GGN+Q ++SRE M Y +F+ A+ T V M ++
Sbjct: 111 DEMLETVEKLGGNIQCASSRESMMYQAATFNKAIPTAVELMAETIRDPKLTDEELEGQIM 170
Query: 181 ----EISEVSNNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVAENYTG 235
E++E+ + + +L E +H A + L NPLL P+ ++ +N +++ + Y
Sbjct: 171 TAQYEVNEIWSKAELILPELVHMAAFKDNTLGNPLLCPKERLDYINRDVIQTYRDAFYRP 230
Query: 236 PRMVLAASGVEHDQLVSVAEPLLSDL 261
R+V+A +GV H++ V +AE D+
Sbjct: 231 ERLVVAFAGVPHERAVKLAEKYFGDM 256
>sp|Q92IX7|Y293_RICCN Uncharacterized zinc protease RC0293 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=RC0293 PE=3 SV=1
Length = 412
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 179/418 (42%), Gaps = 46/418 (11%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
+S L NG+ I + V+ VA I+L G+ YE+ G +H LE MAF+ T+ R+
Sbjct: 7 VSKLKNGLTILTYNMPYVNSVA-INLIAKVGARYENAEEDGISHFLEHMAFKGTKTRTAK 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDAL-----------------KTYVPEMLTK---- 177
+I +AIGG+ A E Y L + E + K
Sbjct: 66 QIAEAFDAIGGHFNAYTGHENTVYYARVLSENCDKALNILADIIQNSIFSDEEIAKEYQV 125
Query: 178 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 236
+ EI+ +NP L+ E ++ Y L +L + F+ + Y
Sbjct: 126 IMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILGTAKTLATFTKEHFFNFIDKYYNAA 185
Query: 237 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 295
+ L+ +G ++HD++V +AE L S L + Y GG+ + + T VL
Sbjct: 186 NLYLSIAGNIDHDKIVIIAEQLFSSLKQGVKSSFIPAKYIGGNGFINKEL--EQTSLVLG 243
Query: 296 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 355
FE G + + + + T L ++ GG GM SRL++ + + + +++
Sbjct: 244 FE--GTSYINLEKLYQTHLLSIIFGG----------GMSSRLFQSIREKLGLAYAVGSYN 291
Query: 356 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELIS--VATPGEVDQVQLDRAKQSTKSAILM 413
+ Y SG+F I +T D ++L +E+ + + +V ++ RAK +S + M
Sbjct: 292 SAYFDSGVFTIYASTAHD----KLELLYKEIKNEIIKMTEQVSTEEILRAKTQLRSNLQM 347
Query: 414 NLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 471
E SE+IG+ +G+ E ++ + + A DI + A K+ S T A G
Sbjct: 348 AQEKNTYKSEEIGKNYSVFGQYISPEEIMEIIMSIKADDIINTANKIFSGTTTSAIIG 405
>sp|Q86A84|MPPA1_DICDI Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium
discoideum GN=mppA1 PE=1 SV=1
Length = 654
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 112/235 (47%), Gaps = 29/235 (12%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
K +ISTLPNG+++ S+ + V +I LY+ G+ YESP G +LLE+M F+ T+N S
Sbjct: 143 KAEISTLPNGIRVVSKQTHEGVCAIGLYINAGTKYESPQDRGVFNLLEKMTFKETKNNST 202
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMLTKVKSEIS-------------- 183
I++E+E I N AS+SRE + S + L+ + +L+ + +I
Sbjct: 203 SEIIKELEEISMNAMASSSREMINVSLEVLRKDLEFVLSILSDQIKSPTYSEEELREQIE 262
Query: 184 ------EVSNNPQS--LLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 234
E+ N S L+ E + + A L N ++A + L + + + Y
Sbjct: 263 VCIRNYEMITNSSSDQLMTEILMGVAFGDAGLGNLVIATPEQYQNITREKLFDALRKYYV 322
Query: 235 GPRMVLAASGVEHDQLVSVAEPLLSDLPSIH---PREEPKS---VYTGGDYRCQA 283
G +V++ +G EH Q++ + + D+P P E+ Y GG C A
Sbjct: 323 GKNIVISVTGAEHSQVIELVDKYFGDIPFTQKDTPSEDSIDSTITYKGGTDACVA 377
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
Query: 304 KDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGM 363
++KD + VLQ LLGGG S+S GGPGKGM SRL V+ +V++ AF ++N +
Sbjct: 463 ENKDIINGLVLQSLLGGGSSYSTGGPGKGMQSRLNLNVVYSSHRVKNCHAFLFVFNKVSL 522
Query: 364 FGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMVVSE 423
FGI TT S F+ I+L +EL+ + + + Q +L+RAK+S KS IL NLE R V +
Sbjct: 523 FGISLTTQSGFLQDGIELVLQELLMLRSS--MTQQELERAKRSQKSQILQNLEMRSVQCD 580
Query: 424 DIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSS 463
D+ R +L++G K E K ++ VT DI + KL S
Sbjct: 581 DMARHILSFGSYKSPEQICKLIDSVTLDDIKKLISKLAQS 620
>sp|O05945|Y219_RICPR Uncharacterized zinc protease RP219 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP219 PE=3 SV=1
Length = 412
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 176/418 (42%), Gaps = 46/418 (11%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
+S L NG+ I + V VA I+L G+ YE+ G +H LE MAF+ T+ R+
Sbjct: 7 VSKLKNGLTILTYNMPYVHSVA-INLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQ 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDAL-----------------KTYVPEMLTK---- 177
+I E ++IGG A E Y L + E + K
Sbjct: 66 QIAEEFDSIGGYFNAYTGHENTVYYARVLSENCHKALNILADIIQNSIFADEEIAKEYQI 125
Query: 178 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 236
+ EI+ +NP L+ E ++ Y G L +L + F+ ++Y
Sbjct: 126 IMQEIAHHHDNPDDLIYETFYNTVYKGQPLGKSILGTTKTLVTFTKEHFLNFIGKHYNAE 185
Query: 237 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 295
+ L+ +G +EH+++V +AE L + L + Y GG + + T VL
Sbjct: 186 NLYLSIAGNIEHNKIVMIAEELFASLKQGVKSSFIPAKYIGGKGFIHKEL--EQTSLVLG 243
Query: 296 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 355
FE + + T +L ++ GG GM SRL++ + + +++
Sbjct: 244 FECTSYINLGQLYQTY-LLSIIFGG-----------GMSSRLFQSIREKLGLAYVVGSYN 291
Query: 356 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELIS--VATPGEVDQVQLDRAKQSTKSAILM 413
+ Y SG+F I +T + ++L RE+ + + V ++ RAK +S + M
Sbjct: 292 SAYFDSGVFTIYASTAHN----KLELLYREIKNEIIKITETVSTEEIIRAKMQLRSNLQM 347
Query: 414 NLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 471
E SE+IG+ +G+ E ++ + + A DI + A K+ S T+A G
Sbjct: 348 AQEQNTYKSEEIGKNYSVFGKYILPEEIIEIITNIRADDIINTANKIFSGTTTLAIIG 405
>sp|Q68XF0|Y210_RICTY Uncharacterized zinc protease RT0210 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0210 PE=3 SV=1
Length = 412
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 174/416 (41%), Gaps = 42/416 (10%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
IS L NG+ I + V VA I+L G+ YE+ G +H LE MAF+ T+ R+
Sbjct: 7 ISKLKNGLTILTYNMPYVHSVA-INLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQ 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDAL-----------------KTYVPEMLTK---- 177
+I E ++IGG A E Y L + E ++K
Sbjct: 66 QIAEEFDSIGGYFNAYTGYENTVYYVRVLSENCHKALNILADIIQNSIFADEEISKEYQI 125
Query: 178 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 236
+ EI+ +NP L+ E ++ Y L +L + + F+ ++Y
Sbjct: 126 IMQEIAHHHDNPDDLIYETFYNTVYKDQPLGKSILGTAKTLVKFTQEHFLNFIGKHYNAE 185
Query: 237 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 295
+ L+ +G +EH+++V +AE L + L + Y GG + + T VL
Sbjct: 186 NLYLSIAGNIEHNKIVIIAEELFASLKQGVTSSFIPAKYIGGKGFIHKEL--EQTSLVLG 243
Query: 296 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 355
FE + +K T +L ++ GGG S SRL++ + + +++
Sbjct: 244 FECTSYINLEKLYQTY-LLSIIFGGGVS-----------SRLFQSIREKLGLAYVVGSYN 291
Query: 356 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNL 415
+ Y SG+F I +T + + E+I + V +L RAK +S + M
Sbjct: 292 SAYFDSGVFTIYASTAHEKLELLYSEIKNEIIKITET--VSTEELMRAKIQLRSNLQMAQ 349
Query: 416 ESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 471
E SE+IG+ +G+ E ++ + + A DI + A K+ S +A G
Sbjct: 350 EQNSYKSEEIGKNYSVFGKYILPEEIIEIITNIKADDIINTANKIFSGTTALAIIG 405
>sp|Q04805|YMXG_BACSU Uncharacterized zinc protease YmxG OS=Bacillus subtilis (strain
168) GN=ymxG PE=3 SV=3
Length = 409
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 184/427 (43%), Gaps = 54/427 (12%)
Query: 83 TLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
T NGV+I E +V VA I +++G GS +E+P G +H LE M F+ T +S I
Sbjct: 6 TCQNGVRIVLENNPTVRSVA-IGVWIGTGSRHETPEINGISHFLEHMFFKGTSTKSAREI 64
Query: 141 VREVEAIGGNVQASASR-----------EQMGYSFDAL------KTYVPEMLTKVKS--- 180
+ IGG V A S+ E Y+ D L T+ L K K+
Sbjct: 65 AESFDRIGGQVNAFTSKEYTCYYAKVLDEHANYALDVLADMFFHSTFDENELKKEKNVVY 124
Query: 181 -EISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRM 238
EI + P ++ + + A Y +L P+L E + N L +++ + YT R+
Sbjct: 125 EEIKMYEDAPDDIVHDLLSKATYGNHSLGYPILGTEETLASFNGDSLRQYMHDYYTPDRV 184
Query: 239 VLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY------RCQADSGDQLTHF 292
V++ +G ++++ + D+ E K TG + + + H
Sbjct: 185 VISVAG-------NISDSFIKDVEKWFGSYEAKGKATGLEKPEFHTEKLTRKKETEQAHL 237
Query: 293 VLAFE-LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSF 351
L F+ L G + D L VL +LGG M SRL++ V + S
Sbjct: 238 CLGFKGLEVGHERIYD---LIVLNNVLGG-----------SMSSRLFQDVREDKGLAYSV 283
Query: 352 SAFSNIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAI 411
++ + Y SGM I G TG++ + + + L ++ G + +L+ +K+ K ++
Sbjct: 284 YSYHSSYEDSGMLTIYGGTGANQLQQLSETIQETLATLKRDG-ITSKELENSKEQMKGSL 342
Query: 412 LMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 471
+++LES G+ L G+ K ++ + + V + + +A++L + +A
Sbjct: 343 MLSLESTNSKMSRNGKNELLLGKHKTLDEIINELNAVNLERVNGLARQLFTEDYALALIS 402
Query: 472 DVINVPS 478
N+PS
Sbjct: 403 PSGNMPS 409
>sp|O60044|QCR2_NEUCR Cytochrome b-c1 complex subunit 2, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=qcr-2 PE=2 SV=2
Length = 454
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 178/417 (42%), Gaps = 43/417 (10%)
Query: 87 GVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEA 146
GVK+AS P +++ G+ YE P+ G T LE AF++T R+ LRI RE E
Sbjct: 46 GVKVASRDDSGPTTRLAVVAKAGTRYE-PLP-GLTVGLEEFAFKNTNKRTALRITRESEL 103
Query: 147 IGGNVQASASREQMGYSFDALKT---YVPEMLTKVKSEISEVSNNPQSLL---------- 193
+GG +QA +RE + L+ Y E+L +V SE ++ L+
Sbjct: 104 LGGQLQAYHTREAVVLQASFLREDLPYFTELLAEVISETKYTTHEFHELVENCIHEKQAK 163
Query: 194 -------LEAIHSAGYSGALANPLL----APESAINRLNSTLLEEFVAENYTGPRMVLAA 242
L+A H+ + L +PL P S+ LN + F Y + + A
Sbjct: 164 LDSAAIALDAAHNVAFHSGLGSPLYPTVDTPTSSY--LNENSVAAFANLAYNKANIAVVA 221
Query: 243 SGVEHDQLVSVAEPLLSDLPSIHP--REEPKSVYTGGDYRCQADSGDQLTHFVLAFELPG 300
G L EP +P+ S Y GG+ R + + + V+AF PG
Sbjct: 222 DGASQAGLEKWVEPFFKGVPATSSGNLNTAASKYFGGEQRVAKNGKNAI---VIAF--PG 276
Query: 301 GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNH 360
T +VL LLGG + PG +S L + P ++F A + Y+
Sbjct: 277 ASLGVPHPET-SVLVGLLGGVSNIK-WSPG---FSLLAKATAAN-PGAEAF-AHNYAYSD 329
Query: 361 SGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAILMNLESRMV 420
+G+ IQ T V K A + L ++A G V + L +A K +L E
Sbjct: 330 AGLLAIQITGKGAAVGKVAVEAVKGLKAIAAGG-VSKEDLTKAIAKAKFNLLSASEVSGT 388
Query: 421 VSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVP 477
G +L G+ V LK +EGVTA+ + + A+KLL ++++ GD+ +P
Sbjct: 389 GLVHAGANLLAGGKPIQVAETLKALEGVTAEKLQAAAKKLLEGKASVSAVGDLHVLP 445
>sp|P78761|QCR2_SCHPO Cytochrome b-c1 complex subunit 2, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr2 PE=2 SV=2
Length = 426
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 168/429 (39%), Gaps = 69/429 (16%)
Query: 87 GVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEA 146
GV A + + S+S+ + GS Y+ G +HLLE+ AF++T RS LRI RE E
Sbjct: 30 GVSFAGRETPTATGSLSVVINAGSRYQPDA--GVSHLLEKFAFKTTEERSALRITRESEL 87
Query: 147 IGGNVQASASREQ------------------MGYSFDALKTYVPEMLT-------KVKSE 181
+GG + +RE + DA K ++P LT +++SE
Sbjct: 88 LGGQLSTQITREHIILTARFLNEYLEYYARLLAEVVDATK-FLPFQLTEEVLPTARIESE 146
Query: 182 ISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLA 241
+ + + + +H + + N + P SA ++ +++F ++ Y +
Sbjct: 147 L--FREDILRVAMAKLHEKAFHRGIGNEVYLPASASPSISE--IKDFASKAYVKSNFSVI 202
Query: 242 ASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLAFELPGG 301
+SG + + + + +P P + + + G+ R + + +F L F P
Sbjct: 203 SSGPDVQKASDLCAKYFAVIPDGSPLKSAPTKISSGESRVYSKGTN---YFCLGFPAPAA 259
Query: 302 WHKDKDAMTLTVLQMLLGGGGS--FSAG----GPGKGMYSRLYRRVLNEFPQVQSFSAFS 355
+ L VL +LGG + +S G G S + + S S
Sbjct: 260 ------SPELFVLSSILGGDAAVKWSHGNTLLAKAAGTASEYKATAVADLTPYSDASLLS 313
Query: 356 NIYNHSGMFGIQGTTGSDFVSKAIDLAARELISVATPGEVDQVQLDRAKQSTKSAI---- 411
+ + S I+ T F A + +S P +V + + AK SA
Sbjct: 314 VVISGSCPKAIKATASESF-------KALKSLSSNIPNDVVKSGIAMAKTKYLSAFEPVT 366
Query: 412 LMNLESRMVVSEDIGRQVLTYGERKPVEHFLKTVEGVTAKDIASVAQKLLSSPLTMASYG 471
L + + +VS G + F+ + VT I+ V LL+ P + + G
Sbjct: 367 LNAISASSLVSASKGS-----------DAFISGFDKVTPASISKVVSSLLAKPASTVAVG 415
Query: 472 DVINVPSYD 480
++ +P YD
Sbjct: 416 NLDVLPYYD 424
>sp|P83782|QCR2_CANAL Cytochrome b-c1 complex subunit 2, mitochondrial OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=QCR2 PE=1
SV=2
Length = 374
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 32/227 (14%)
Query: 82 STLPNGVKIASETSVSPVASISLYVG-CGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
S++PN VKIA++ S + + +S+ + GS G +HLL + F + +S LR
Sbjct: 11 SSIPNSVKIAAKESATDLTKLSVIINNAGSKTGKS---GVSHLLSKFTFLNNGAKSALRF 67
Query: 141 VREVEAIGGNVQASASREQMGYSFDALKTYVP---EMLTKVKS-------EISEV----- 185
RE E +GG ++ +R+ + + LK +P E L V S E +E+
Sbjct: 68 TRESELLGGTFESKVTRDALILNTTFLKQDLPYYVEALGNVVSNTQFAPHEFNEIVLPTA 127
Query: 186 -------SNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRM 238
+ NP +E +H + L NPL ES +L + +F E ++G +
Sbjct: 128 NAETKLANANPAFKGVEKLHEITFRRGLGNPLFYNESTPIKLEE--VAQFSKEQFSGENI 185
Query: 239 VLAASGVEHDQLVS-VAEPLLSDLPSIH---PREEPKSVYTGGDYRC 281
+ A G + L V+E LPS + P + +TG + R
Sbjct: 186 SIVAEGANEEDLTKFVSESAFCYLPSSSSNGAKALPTNTFTGQEARV 232
>sp|Q75CW5|QCR2_ASHGO Cytochrome b-c1 complex subunit 2, mitochondrial OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=QCR2 PE=3 SV=2
Length = 366
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 27/197 (13%)
Query: 90 IASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGG 149
+A++ V+++S+ V GS Y + G HLL R F +T N+S LR+VRE E +GG
Sbjct: 18 VAAKDGSGKVSTLSVQVQGGSRYATKD--GVAHLLSRFNFHNTGNKSALRLVRESELLGG 75
Query: 150 NVQASASREQMGYSFDALKTYVPEMLTKVKSEISEVSNNPQSL----------------- 192
Q++ RE + S LK +P + + + + S P L
Sbjct: 76 RFQSTVDREHITLSATFLKEDLPYFVNALADVLYKTSFRPHELAESVLPAATRDAAVARA 135
Query: 193 -----LLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGV-E 246
EA++S Y L P+L + ++ ++ + + YT + + G+ E
Sbjct: 136 CPVAAAEEALYSVTYRHGLGKPVL--YDGVEKVTLEDIKAYADKVYTKENVTVLGQGINE 193
Query: 247 HDQLVSVAEPLLSDLPS 263
D V + LL+ LPS
Sbjct: 194 ADLKRFVNDSLLASLPS 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,841,441
Number of Sequences: 539616
Number of extensions: 7300397
Number of successful extensions: 20358
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 19965
Number of HSP's gapped (non-prelim): 240
length of query: 489
length of database: 191,569,459
effective HSP length: 122
effective length of query: 367
effective length of database: 125,736,307
effective search space: 46145224669
effective search space used: 46145224669
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)