BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011283
(489 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NZT|A Chain A, Crystal Structure Of Human Hexokinase Ii
pdb|2NZT|B Chain B, Crystal Structure Of Human Hexokinase Ii
Length = 902
Score = 274 bits (700), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 162/411 (39%), Positives = 231/411 (56%), Gaps = 19/411 (4%)
Query: 50 LRNVADAMTADMRAGLV--VDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L V M +M GL +KM+ +YV A P G E+G F ALDLGGTNFRVL V
Sbjct: 470 LLEVKRRMKVEMERGLSKETHASAPVKMLPTYVCATPDGTEKGDFLALDLGGTNFRVLLV 529
Query: 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167
++ + + +IPQE+M GT +ELFD I +A F E K G +
Sbjct: 530 RVRNGKWGGVEMHNKIYAIPQEVMHGTGDELFDHIVQCIADFLEYMGMK-----GVSLPL 584
Query: 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMER-QGLDMRVSALVNDT 226
GFTFSFP +Q S+D +L+KWTKGF SG G+DVV L EA+ R + D+ V A+VNDT
Sbjct: 585 GFTFSFPCQQNSLDESILLKWTKGFKASGCEGEDVVTLLKEAIHRREEFDLDVVAVVNDT 644
Query: 227 VGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKG 286
VGT+ + D V +I+GTG+NACY+E+M + ++G + GR +N EWGAF
Sbjct: 645 VGTMMTCGFEDPHCEVGLIVGTGSNACYMEEMRNVELVEGEE---GRMCVNMEWGAFGDN 701
Query: 287 LPL----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEK 342
L TEFD +D S+NPG+Q +EK ISGMYLGEIVR +L+ + G LF + E+
Sbjct: 702 GCLDDFRTEFDVAVDELSLNPGKQRFEKMISGMYLGEIVRNILIDFTKRGLLFRGRISER 761
Query: 343 LSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRL 402
L + T + ++ D LQ + G+ES+ +V EVC + +R +L
Sbjct: 762 LKTRGIFETKFLSQIESDCLALLQV--RAILQHLGLESTCDDSIIVKEVCTVVARRAAQL 819
Query: 403 AGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
GAG+ +++ +I E N + + V +DG LY+ + + + +HE V +L
Sbjct: 820 CGAGMAAVVDRIRE--NRGLDALKVTVGVDGTLYKLHPHFAKVMHETVKDL 868
Score = 258 bits (659), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 231/389 (59%), Gaps = 21/389 (5%)
Query: 73 LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEERVQATEFEQ--VSIPQEL 130
+KM+ ++V + P G E G F ALDLGGTNFRVL V++ + +Q E E +IP+++
Sbjct: 47 VKMLPTFVRSTPDGTEHGEFLALDLGGTNFRVLWVKV--TDNGLQKVEMENQIYAIPEDI 104
Query: 131 MCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTK 190
M G+ +LFD IA LA F +K K ++ +GFTFSFP QT +D L+ WTK
Sbjct: 105 MRGSGTQLFDHIAECLANFMDKLQIK-----DKKLPLGFTFSFPCHQTKLDESFLVSWTK 159
Query: 191 GFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTG 249
GF SG G+DVVA + +A++R+G D+ + A+VNDTVGT+ Y D + + +I+GTG
Sbjct: 160 GFKSSGVEGRDVVALIRKAIQRRGDFDIDIVAVVNDTVGTMMTCGYDDHNCEIGLIVGTG 219
Query: 250 TNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLPL----TEFDRDMDAASINPGE 305
+NACY+E+M I ++G++ GR IN EWGAF L TEFD+++D S+NPG+
Sbjct: 220 SNACYMEEMRHIDMVEGDE---GRMCINMEWGAFGDDGSLNDIRTEFDQEIDMGSLNPGK 276
Query: 306 QIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDL 365
Q++EK ISGMY+GE+VR +L+KMA+E LFG + +L T I ++ + + +
Sbjct: 277 QLFEKMISGMYMGELVRLILVKMAKEELLFGGKLSPELLNTGRFETKDISDIEGE-KDGI 335
Query: 366 QAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGK 425
+ L + G++ + + +C + R L A + ++LQ+I E+
Sbjct: 336 RKAREVLMRL-GLDPTQEDCVATHRICQIVSTRSASLCAATLAAVLQRIKENKGEERL-- 392
Query: 426 RTVVAMDGGLYEHYTQYRRYVHEAVTELL 454
R+ + +DG +Y+ + + + +H+ V L+
Sbjct: 393 RSTIGVDGSVYKKHPHFAKRLHKTVRRLV 421
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/410 (39%), Positives = 240/410 (58%), Gaps = 22/410 (5%)
Query: 55 DAMT---ADMRAGLVVDGG--GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQL 109
D MT +M+ GL D +KM+ ++V ++P G+E+G F ALDLGG++FR+LRVQ+
Sbjct: 38 DIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQV 97
Query: 110 GGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169
++ + E E P+ ++ G+ +LFD +A L F EK K ++ +GF
Sbjct: 98 NHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGF 152
Query: 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVNDTVG 228
TFSFP +Q+ ID +LI WTK F SG G DVV LN+A++++G D + A+VNDTVG
Sbjct: 153 TFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVG 212
Query: 229 TLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLP 288
T+ Y D+ V +I+GTGTNACY+E++ I ++G++ GR INTEWGAF
Sbjct: 213 TMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDE---GRMCINTEWGAFGDDGS 269
Query: 289 L----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLS 344
L TEFDR +DA S+NPG+Q++EK +SGMYLGE+VR +L+KMA+EG LF + +L
Sbjct: 270 LEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELL 329
Query: 345 MPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAG 404
T + A++++ E L L + GVE S V VC + R L
Sbjct: 330 TRGKFNTSDVSAIEKN-KEGLHNAKEILTRL-GVEPSDDDCVSVQHVCTIVSFRSANLVA 387
Query: 405 AGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELL 454
A + +IL ++ ++ RT V +DG LY+ + QY R H+ + L+
Sbjct: 388 ATLGAILNRLRDNKGTPRL--RTTVGVDGSLYKTHPQYSRRFHKTLRRLV 435
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/412 (38%), Positives = 231/412 (56%), Gaps = 19/412 (4%)
Query: 49 VLRNVADAMTADMRAGL--VVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLR 106
+L V M A+M GL +KM+ S+V P G E G F ALDLGG NFRVL
Sbjct: 483 MLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGANFRVLL 542
Query: 107 VQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQRE 166
V++ ++R + +IP E+M GT EELFD I + ++ F + K G +
Sbjct: 543 VKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMP 597
Query: 167 IGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME-RQGLDMRVSALVND 225
+GFTFSFP +QTS+D+G+LI WTKGF + G DVV L +A++ R+ D+ V A+VND
Sbjct: 598 LGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVND 657
Query: 226 TVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSK 285
TVGT+ Y + V +I+GTG+NACY+E+M + ++G++ G+ IN EWGAF
Sbjct: 658 TVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQ---GQMCINMEWGAFGD 714
Query: 286 GLPL----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPE 341
L T +DR +D S+N G+Q YEK ISGMYLGEIVR +L+ ++G LF + E
Sbjct: 715 NGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISE 774
Query: 342 KLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGR 401
L + T + ++ D LQ + G+ S+ +V VC + +R +
Sbjct: 775 TLKTRGIFETKFLSQIESDRLALLQV--RAILQQLGLNSTCDDSILVKTVCGVVSRRAAQ 832
Query: 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
L GAG+ +++ KI E N + V +DG LY+ + + R +H+ V EL
Sbjct: 833 LCGAGMAAVVDKIRE--NRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/410 (39%), Positives = 240/410 (58%), Gaps = 22/410 (5%)
Query: 55 DAMT---ADMRAGLVVDGG--GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQL 109
D MT +M+ GL D +KM+ ++V ++P G+E+G F ALDLGG++FR+LRVQ+
Sbjct: 38 DIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQV 97
Query: 110 GGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169
++ + E E P+ ++ G+ +LFD +A L F EK K ++ +GF
Sbjct: 98 NHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGF 152
Query: 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVNDTVG 228
TFSFP +Q+ ID +LI WTK F SG G DVV LN+A++++G D + A+VNDTVG
Sbjct: 153 TFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVG 212
Query: 229 TLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLP 288
T+ Y D+ V +I+GTGTNACY+E++ I ++G++ GR INTEWGAF
Sbjct: 213 TMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDE---GRMCINTEWGAFGDDGS 269
Query: 289 L----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLS 344
L TEFDR +DA S+NPG+Q++EK +SGMYLGE+VR +L+KMA+EG LF + +L
Sbjct: 270 LEDIRTEFDRAIDAYSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELL 329
Query: 345 MPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAG 404
T + A++++ E L L + GVE S V VC + R L
Sbjct: 330 TRGKFNTSDVSAIEKN-KEGLHNAKEILTRL-GVEPSDDDCVSVQHVCTIVSFRSANLVA 387
Query: 405 AGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELL 454
A + +IL ++ ++ RT V +DG LY+ + QY R H+ + L+
Sbjct: 388 ATLGAILNRLRDNKGTPRL--RTTVGVDGSLYKTHPQYSRRFHKTLRRLV 435
Score = 267 bits (683), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 232/412 (56%), Gaps = 19/412 (4%)
Query: 49 VLRNVADAMTADMRAGL--VVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLR 106
+L V M A+M GL +KM+ S+V P G E G F ALDLGGTNFRVL
Sbjct: 483 MLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLL 542
Query: 107 VQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQRE 166
V++ ++R + +IP E+M GT EELFD I + ++ F + K G +
Sbjct: 543 VKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLDYMGIK-----GPRMP 597
Query: 167 IGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME-RQGLDMRVSALVND 225
+GFTFSFP +QTS+D+G+LI WTKGF + G DVV L +A++ R+ D+ V A+VND
Sbjct: 598 LGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVND 657
Query: 226 TVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSK 285
TVGT+ Y + V +I+GTG+NACY+E+M + ++G++ G+ IN EWGAF
Sbjct: 658 TVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQ---GQMCINMEWGAFGD 714
Query: 286 GLPL----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPE 341
L T +DR +D S+N G+Q YEK ISGMYLGEIVR +L+ ++G LF + E
Sbjct: 715 NGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISE 774
Query: 342 KLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGR 401
L + T + ++ D LQ + G+ S+ +V VC + +R +
Sbjct: 775 TLKTRGIFETKFLSQIESDRLALLQV--RAILQQLGLNSTCDDSILVKTVCGVVSRRAAQ 832
Query: 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
L GAG+ +++ KI E N + V +DG LY+ + + R +H+ V EL
Sbjct: 833 LCGAGMAAVVDKIRE--NRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 240/410 (58%), Gaps = 22/410 (5%)
Query: 55 DAMT---ADMRAGLVVDGG--GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQL 109
D MT +M+ GL D +KM+ ++V ++P G+E+G F ALDLGG++FR+LRVQ+
Sbjct: 38 DIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQV 97
Query: 110 GGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169
++ + E E P+ ++ G+ +LFD +A L F EK K ++ +GF
Sbjct: 98 NHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGF 152
Query: 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVNDTVG 228
TFSFP +Q+ ID +LI WTK F SG G DVV LN+A++++G D + A+VNDTVG
Sbjct: 153 TFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVG 212
Query: 229 TLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLP 288
T+ Y D+ V +I+GTGTNACY+E++ I ++G++ GR INTEWGAF
Sbjct: 213 TMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDE---GRMCINTEWGAFGDDGS 269
Query: 289 L----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLS 344
L TEFDR++D S+NPG+Q++EK +SGMYLGE+VR +L+KMA+EG LF + +L
Sbjct: 270 LEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELL 329
Query: 345 MPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAG 404
T + A++++ E L L + GVE S V VC + R L
Sbjct: 330 TRGKFNTSDVSAIEKN-KEGLHNAKEILTRL-GVEPSDDDCVSVQHVCTIVSFRSANLVA 387
Query: 405 AGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELL 454
A + +IL ++ ++ RT V +DG LY+ + QY R H+ + L+
Sbjct: 388 ATLGAILNRLRDNKGTPRL--RTTVGVDGSLYKTHPQYSRRFHKTLRRLV 435
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 233/412 (56%), Gaps = 19/412 (4%)
Query: 49 VLRNVADAMTADMRAGL--VVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLR 106
+L V M A+M GL +KM+ S+V P G E G F ALDLGGTNFRVL
Sbjct: 483 MLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLL 542
Query: 107 VQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQRE 166
V++ ++R + +IP E+M GT EELFD I + ++ F + + +G +
Sbjct: 543 VKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLD-----YMGIKGPRMP 597
Query: 167 IGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME-RQGLDMRVSALVND 225
+GFTFSFP +QTS+D+G+LI WTKGF + G DVV L +A++ R+ D+ V A+VND
Sbjct: 598 LGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVND 657
Query: 226 TVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSK 285
TVGT+ Y + V +I+GTG+NACY+E+M + ++G++ G+ IN EWGAF
Sbjct: 658 TVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQ---GQMCINMEWGAFGD 714
Query: 286 GLPL----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPE 341
L T +DR ++ S+N G+Q YEK ISGMYLGEIVR +L+ ++G LF + E
Sbjct: 715 NGCLDDIRTHYDRLVNEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISE 774
Query: 342 KLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGR 401
L + T + ++ D LQ + G+ S+ +V VC + +R +
Sbjct: 775 TLKTRGIFETKFLSQIESDRLALLQV--RAILQQLGLNSTCDDSILVKTVCGVVSRRAAQ 832
Query: 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
L GAG+ +++ KI E N + V +DG LY+ + + R +H+ V EL
Sbjct: 833 LCGAGMAAVVDKIRE--NRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 240/410 (58%), Gaps = 22/410 (5%)
Query: 55 DAMT---ADMRAGLVVDGG--GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQL 109
D MT +M+ GL D +KM+ ++V ++P G+E+G F ALDLGG++FR+LRVQ+
Sbjct: 38 DIMTRFRKEMKNGLSRDFNPTATVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILRVQV 97
Query: 110 GGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGF 169
++ + E E P+ ++ G+ +LFD +A L F EK K ++ +GF
Sbjct: 98 NHEKNQNVHMESEVYDTPENIVHGSGSQLFDHVAECLGDFMEKRKIK-----DKKLPVGF 152
Query: 170 TFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVNDTVG 228
TFSFP +Q+ ID +LI WTK F SG G DVV LN+A++++G D + A+VNDTVG
Sbjct: 153 TFSFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVG 212
Query: 229 TLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLP 288
T+ Y D+ V +I+GTGTNACY+E++ I ++G++ GR INTEWGAF
Sbjct: 213 TMMTCGYDDQHCEVGLIIGTGTNACYMEELRHIDLVEGDE---GRMCINTEWGAFGDDGS 269
Query: 289 L----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLS 344
L TEFDR++D S+NPG+Q++EK +SGMYLGE+VR +L+KMA+EG LF + +L
Sbjct: 270 LEDIRTEFDREIDRGSLNPGKQLFEKMVSGMYLGELVRLILVKMAKEGLLFEGRITPELL 329
Query: 345 MPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRLAG 404
T + A++++ E L L + GVE S V VC + R L
Sbjct: 330 TRGKFNTSDVSAIEKN-KEGLHNAKEILTRL-GVEPSDDDCVSVQHVCTIVSFRSANLVA 387
Query: 405 AGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELL 454
A + +IL ++ ++ RT V +DG LY+ + QY R H+ + L+
Sbjct: 388 ATLGAILNRLRDNKGTPRL--RTTVGVDGSLYKTHPQYSRRFHKTLRRLV 435
Score = 268 bits (684), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 158/412 (38%), Positives = 233/412 (56%), Gaps = 19/412 (4%)
Query: 49 VLRNVADAMTADMRAGL--VVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLR 106
+L V M A+M GL +KM+ S+V P G E G F ALDLGGTNFRVL
Sbjct: 483 MLLEVKKRMRAEMELGLRKQTHNNAVVKMLPSFVRRTPDGTENGDFLALDLGGTNFRVLL 542
Query: 107 VQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQRE 166
V++ ++R + +IP E+M GT EELFD I + ++ F + + +G +
Sbjct: 543 VKIRSGKKRTVEMHNKIYAIPIEIMQGTGEELFDHIVSCISDFLD-----YMGIKGPRMP 597
Query: 167 IGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME-RQGLDMRVSALVND 225
+GFTFSFP +QTS+D+G+LI WTKGF + G DVV L +A++ R+ D+ V A+VND
Sbjct: 598 LGFTFSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVND 657
Query: 226 TVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSK 285
TVGT+ Y + V +I+GTG+NACY+E+M + ++G++ G+ IN EWGAF
Sbjct: 658 TVGTMMTCAYEEPTCEVGLIVGTGSNACYMEEMKNVEMVEGDQ---GQMCINMEWGAFGD 714
Query: 286 GLPL----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPE 341
L T +DR +D S+N G+Q YEK ISGMYLGEIVR +L+ ++G LF + E
Sbjct: 715 NGCLDDIRTHYDRLVDEYSLNAGKQRYEKMISGMYLGEIVRNILIDFTKKGFLFRGQISE 774
Query: 342 KLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGR 401
L + T + ++ D LQ + G+ S+ +V VC + +R +
Sbjct: 775 TLKTRGIFETKFLSQIESDRLALLQV--RAILQQLGLNSTCDDSILVKTVCGVVSRRAAQ 832
Query: 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
L GAG+ +++ KI E N + V +DG LY+ + + R +H+ V EL
Sbjct: 833 LCGAGMAAVVDKIRE--NRGLDRLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
>pdb|1BG3|A Chain A, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
pdb|1BG3|B Chain B, Rat Brain Hexokinase Type I Complex With Glucose And
Inhibitor Glucose-6-Phosphate
Length = 918
Score = 272 bits (695), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/414 (38%), Positives = 244/414 (58%), Gaps = 21/414 (5%)
Query: 49 VLRNVADAMTADMRAGLVVDGG--GELKMILSYVDALPTGNERGLFYALDLGGTNFRVLR 106
+L ++ +M+ GL D +KM+ ++V ++P G+E+G F ALDLGG++FR+LR
Sbjct: 35 ILIDILTRFKKEMKNGLSRDYNPTASVKMLPTFVRSIPDGSEKGDFIALDLGGSSFRILR 94
Query: 107 VQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFH-LPQGRQR 165
VQ+ ++ + + E E P+ ++ G+ +LFD +A L F EK+ K LP
Sbjct: 95 VQVNHEKNQNVSMESEIYDTPENIVHGSGTQLFDHVADCLGDFMEKKKIKDKKLP----- 149
Query: 166 EIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVN 224
+GFTFSFP +Q+ ID VLI WTK F SG G DVV LN+A++++G D + A+VN
Sbjct: 150 -VGFTFSFPCRQSKIDEAVLITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVN 208
Query: 225 DTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS 284
DTVGT+ Y D+ V +I+GTGTNACY+E++ I ++G++ GR INTEWGAF
Sbjct: 209 DTVGTMMTCGYDDQQCEVGLIIGTGTNACYMEELRHIDLVEGDE---GRMCINTEWGAFG 265
Query: 285 KGLPL----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340
L TEFDR++D S+NPG+Q++EK +SGMY+GE+VR +L+KMA+EG LF +
Sbjct: 266 DDGSLEDIRTEFDRELDRGSLNPGKQLFEKMVSGMYMGELVRLILVKMAKEGLLFEGRIT 325
Query: 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGG 400
+L T + A+++D E +Q L + GVE S V +C + R
Sbjct: 326 PELLTRGKFNTSDVSAIEKD-KEGIQNAKEILTRL-GVEPSDVDCVSVQHICTIVSFRSA 383
Query: 401 RLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELL 454
L A + +IL ++ ++ RT V +DG LY+ + QY R H+ + L+
Sbjct: 384 NLVAATLGAILNRLRDNKGTPRL--RTTVGVDGSLYKMHPQYSRRFHKTLRRLV 435
Score = 268 bits (684), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 233/411 (56%), Gaps = 19/411 (4%)
Query: 50 LRNVADAMTADMRAGLV--VDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L V + +M GL + +KM+ S+V ++P G E G F ALDLGGTNFRVL V
Sbjct: 484 LMEVKKRLRTEMEMGLRKETNSKATVKMLPSFVRSIPDGTEHGDFLALDLGGTNFRVLLV 543
Query: 108 QLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI 167
++ ++R + SIP E+M GT +ELFD I + ++ F + K G + +
Sbjct: 544 KIRSGKKRTVEMHNKIYSIPLEIMQGTGDELFDHIVSCISDFLDYMGIK-----GPRMPL 598
Query: 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAME-RQGLDMRVSALVNDT 226
GFTFSFP QT++D G+LI WTKGF + G DV + L +A++ R+ D+ V A+VNDT
Sbjct: 599 GFTFSFPCHQTNLDCGILISWTKGFKATDCEGHDVASLLRDAVKRREEFDLDVVAVVNDT 658
Query: 227 VGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKG 286
VGT+ Y + + +I+GTGTNACY+E+M + ++GN+ G+ IN EWGAF
Sbjct: 659 VGTMMTCAYEEPTCEIGLIVGTGTNACYMEEMKNVEMVEGNQ---GQMCINMEWGAFGDN 715
Query: 287 LPL----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEK 342
L T+FD+ +D S+N G+Q +EK ISGMYLGEIVR +L+ ++G LF + E
Sbjct: 716 GCLDDIRTDFDKVVDEYSLNSGKQRFEKMISGMYLGEIVRNILIDFTKKGFLFRGQISEP 775
Query: 343 LSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGGRL 402
L + T + ++ D LQ + G+ S+ +V VC + KR +L
Sbjct: 776 LKTRGIFETKFLSQIESDRLALLQV--RAILQQLGLNSTCDDSILVKTVCGVVSKRAAQL 833
Query: 403 AGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
GAG+ ++++KI E N + V +DG LY+ + + R +H+ V EL
Sbjct: 834 CGAGMAAVVEKIRE--NRGLDHLNVTVGVDGTLYKLHPHFSRIMHQTVKEL 882
>pdb|3HM8|A Chain A, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|B Chain B, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|C Chain C, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
pdb|3HM8|D Chain D, Crystal Structure Of The C-Terminal Hexokinase Domain Of
Human Hk3
Length = 445
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 245/424 (57%), Gaps = 24/424 (5%)
Query: 38 KLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGE---LKMILSYVDALPTGNERGLFYA 94
+L +E AP + + A+ A MR + GE L+M+ ++V A P G+ERG F A
Sbjct: 4 RLLEETLAPFRLNHDQLAAVQAQMRKAMAKGLRGEASSLRMLPTFVRATPDGSERGDFLA 63
Query: 95 LDLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEA 154
LDLGGTNFRVL V++ VQ T E SIP+ + G+ ++LFD I + F +K+
Sbjct: 64 LDLGGTNFRVLLVRV---TTGVQITS-EIYSIPETVAQGSGQQLFDHIVDCIVDFQQKQG 119
Query: 155 GKFHLPQGRQREIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAM-ERQ 213
G+ +GFTFSFP +Q +D G+L+ WTKGF S G+DVV+ L EA+ RQ
Sbjct: 120 -----LSGQSLPLGFTFSFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQ 174
Query: 214 GLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGR 273
+++ V A+VNDTVGT+ Y D + +I+GTGTNACY+E++ + + G+ SGR
Sbjct: 175 AVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGTNACYMEELRNVAGVPGD---SGR 231
Query: 274 TIINTEWGAF----SKGLPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMA 329
IN EWGAF S + T FD +D ASINPG+Q +EK ISGMYLGEIVR +LL +
Sbjct: 232 MCINMEWGAFGDDGSLAMLSTRFDASVDQASINPGKQRFEKMISGMYLGEIVRHILLHLT 291
Query: 330 EEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVI 389
G LF ++L + +T + ++ D S L+ V + L D+ G+ + +V+
Sbjct: 292 SLGVLFRGQQIQRLQTRDIFKTKFLSEIESD-SLALRQVRAILEDL-GLPLTSDDALMVL 349
Query: 390 EVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEA 449
EVC + +R +L GAG+ ++++KI E N + V +DG LY+ + ++ V
Sbjct: 350 EVCQAVSQRAAQLCGAGVAAVVEKIRE--NRGLEELAVSVGVDGTLYKLHPRFSSLVAAT 407
Query: 450 VTEL 453
V EL
Sbjct: 408 VREL 411
>pdb|1BDG|A Chain A, Hexokinase From Schistosoma Mansoni Complexed With Glucose
Length = 451
Score = 258 bits (660), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 156/412 (37%), Positives = 225/412 (54%), Gaps = 31/412 (7%)
Query: 53 VADAMTADMRAGL--VVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQL- 109
+ D M MR GL + +KM SYV P G E G F ALDLGGTN+RVL V L
Sbjct: 29 ICDRMGESMRLGLQKSTNEKSSIKMFPSYVTKTPNGTETGNFLALDLGGTNYRVLSVTLE 88
Query: 110 -GGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIG 168
G+ R+Q + IP E M G+ ELF +IA LA F E K ++ ++G
Sbjct: 89 GKGKSPRIQERTY---CIPAEKMSGSGTELFKYIAETLADFLENNGMK-----DKKFDLG 140
Query: 169 FTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVG 228
FTFSFP Q + L++WTKGFS G G +V L ++++ L+++ A+VNDTVG
Sbjct: 141 FTFSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVG 200
Query: 229 TLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFSKGLP 288
TLA D V +I+GTGTN Y+E + + G K P +INTEWGAF +
Sbjct: 201 TLASCALEDPKCAVGLIVGTGTNVAYIEDSSKVELMDGVKEPE--VVINTEWGAFGEKGE 258
Query: 289 L----TEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLS 344
L T+FD+ MD S++PG+Q+YEK +SGMYLGE+VR +++ + E+ LF +PE+L
Sbjct: 259 LDCWRTQFDKSMDIDSLHPGKQLYEKMVSGMYLGELVRHIIVYLVEQKILFRGDLPERLK 318
Query: 345 MPFVLRTPHICAMQQDYSEDLQAVGSTLYD---VAGVESSLKARKVVIEVCDTIVKRGGR 401
+ L T ++ +++D + L L D V VE ++V C+ +VKR
Sbjct: 319 VRNSLLTRYLTDVERDPAHLLYNTHYMLTDDLHVPVVEPI--DNRIVRYACEMVVKRAAY 376
Query: 402 LAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
LAGAGI IL++I+ V +DG LY+ + ++ + + V +L
Sbjct: 377 LAGAGIACILRRINR--------SEVTVGVDGSLYKFHPKFCERMTDMVDKL 420
>pdb|3FR0|A Chain A, Human Glucokinase In Complex With 2-Amino Benzamide
Activator
pdb|3A0I|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
pdb|3GOI|A Chain A, Human Glucokinase In Complex With A Synthetic Activator
Length = 455
Score = 254 bits (649), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 235/413 (56%), Gaps = 21/413 (5%)
Query: 50 LRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L+ V M +M GL ++ E +KM+ +YV + P G+E G F +LDLGGTNFRV+ V
Sbjct: 20 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 79
Query: 108 QLGGQEERVQA--TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR 165
++G EE + T+ + SIP++ M GT+E LFD+I+ ++ F +K H + ++
Sbjct: 80 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 134
Query: 166 EIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVN 224
+GFTFSFPV+ ID G+L+ WTKGF SG G +VV L +A++R+G +M V A+VN
Sbjct: 135 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 194
Query: 225 DTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS 284
DTV T+ Y D V +I+GTG NACY+E+M + ++G++ GR +NTEWGAF
Sbjct: 195 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWGAFG 251
Query: 285 KGLPLTEF----DRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340
L EF DR +D +S NPG+Q+YEK I G Y+GE+VR VLL++ +E LF
Sbjct: 252 DSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEAS 311
Query: 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGG 400
E+L T + ++ D + Q + G+ S +V C+++ R
Sbjct: 312 EQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDCDIVRRACESVSTRAA 369
Query: 401 RLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
+ AG+ ++ ++ E + + R V +DG +Y+ + ++ H +V L
Sbjct: 370 HMCSAGLAGVINRMRESRSEDVM--RITVGVDGSVYKLHPSFKERFHASVRRL 420
>pdb|1V4T|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3H1V|X Chain X, Human Glucokinase In Complex With A Synthetic Activator
Length = 451
Score = 254 bits (649), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 235/413 (56%), Gaps = 21/413 (5%)
Query: 50 LRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L+ V M +M GL ++ E +KM+ +YV + P G+E G F +LDLGGTNFRV+ V
Sbjct: 16 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 75
Query: 108 QLGGQEERVQA--TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR 165
++G EE + T+ + SIP++ M GT+E LFD+I+ ++ F +K H + ++
Sbjct: 76 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 130
Query: 166 EIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVN 224
+GFTFSFPV+ ID G+L+ WTKGF SG G +VV L +A++R+G +M V A+VN
Sbjct: 131 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 190
Query: 225 DTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS 284
DTV T+ Y D V +I+GTG NACY+E+M + ++G++ GR +NTEWGAF
Sbjct: 191 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWGAFG 247
Query: 285 KGLPLTEF----DRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340
L EF DR +D +S NPG+Q+YEK I G Y+GE+VR VLL++ +E LF
Sbjct: 248 DSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEAS 307
Query: 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGG 400
E+L T + ++ D + Q + G+ S +V C+++ R
Sbjct: 308 EQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDCDIVRRACESVSTRAA 365
Query: 401 RLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
+ AG+ ++ ++ E + + R V +DG +Y+ + ++ H +V L
Sbjct: 366 HMCSAGLAGVINRMRESRSEDVM--RITVGVDGSVYKLHPSFKERFHASVRRL 416
>pdb|4DCH|A Chain A, Insights Into Glucokinase Activation Mechanism:
Observation Of Multiple Distinct Protein Conformations
Length = 473
Score = 254 bits (649), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 235/413 (56%), Gaps = 21/413 (5%)
Query: 50 LRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L+ V M +M GL ++ E +KM+ +YV + P G+E G F +LDLGGTNFRV+ V
Sbjct: 30 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 89
Query: 108 QLGGQEERVQA--TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR 165
++G EE + T+ + SIP++ M GT+E LFD+I+ ++ F +K H + ++
Sbjct: 90 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 144
Query: 166 EIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVN 224
+GFTFSFPV+ ID G+L+ WTKGF SG G +VV L +A++R+G +M V A+VN
Sbjct: 145 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 204
Query: 225 DTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS 284
DTV T+ Y D V +I+GTG NACY+E+M + ++G++ GR +NTEWGAF
Sbjct: 205 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWGAFG 261
Query: 285 KGLPLTEF----DRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340
L EF DR +D +S NPG+Q+YEK I G Y+GE+VR VLL++ +E LF
Sbjct: 262 DSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEAS 321
Query: 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGG 400
E+L T + ++ D + Q + G+ S +V C+++ R
Sbjct: 322 EQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDCDIVRRACESVSTRAA 379
Query: 401 RLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
+ AG+ ++ ++ E + + R V +DG +Y+ + ++ H +V L
Sbjct: 380 HMCSAGLAGVINRMRESRSEDVM--RITVGVDGSVYKLHPSFKERFHASVRRL 430
>pdb|1V4S|A Chain A, Crystal Structure Of Human Glucokinase
pdb|3VEY|A Chain A, Glucokinase In Complex With Glucose And Atpgs
Length = 455
Score = 254 bits (649), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 235/413 (56%), Gaps = 21/413 (5%)
Query: 50 LRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L+ V M +M GL ++ E +KM+ +YV + P G+E G F +LDLGGTNFRV+ V
Sbjct: 20 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 79
Query: 108 QLGGQEERVQA--TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR 165
++G EE + T+ + SIP++ M GT+E LFD+I+ ++ F +K H + ++
Sbjct: 80 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 134
Query: 166 EIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVN 224
+GFTFSFPV+ ID G+L+ WTKGF SG G +VV L +A++R+G +M V A+VN
Sbjct: 135 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 194
Query: 225 DTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS 284
DTV T+ Y D V +I+GTG NACY+E+M + ++G++ GR +NTEWGAF
Sbjct: 195 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWGAFG 251
Query: 285 KGLPLTEF----DRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340
L EF DR +D +S NPG+Q+YEK I G Y+GE+VR VLL++ +E LF
Sbjct: 252 DSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEAS 311
Query: 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGG 400
E+L T + ++ D + Q + G+ S +V C+++ R
Sbjct: 312 EQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDCDIVRRACESVSTRAA 369
Query: 401 RLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
+ AG+ ++ ++ E + + R V +DG +Y+ + ++ H +V L
Sbjct: 370 HMCSAGLAGVINRMRESRSEDVM--RITVGVDGSVYKLHPSFKERFHASVRRL 420
>pdb|3IMX|A Chain A, Crystal Structure Of Human Glucokinase In Complex With A
Synthetic Activator
Length = 455
Score = 254 bits (648), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 235/413 (56%), Gaps = 21/413 (5%)
Query: 50 LRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L+ V M +M GL ++ E +KM+ +YV + P G+E G F +LDLGGTNFRV+ V
Sbjct: 20 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 79
Query: 108 QLGGQEERVQA--TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR 165
++G EE + T+ + SIP++ M GT+E LFD+I+ ++ F +K H + ++
Sbjct: 80 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 134
Query: 166 EIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVN 224
+GFTFSFPV+ ID G+L+ WTKGF SG G +VV L +A++R+G +M V A+VN
Sbjct: 135 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 194
Query: 225 DTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS 284
DTV T+ Y D V +I+GTG NACY+E+M + ++G++ GR +NTEWGAF
Sbjct: 195 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWGAFG 251
Query: 285 KGLPLTEF----DRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340
L EF DR +D +S NPG+Q+YEK I G Y+GE+VR VLL++ +E LF
Sbjct: 252 DSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEAS 311
Query: 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGG 400
E+L T + ++ D + Q + G+ S +V C+++ R
Sbjct: 312 EQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDCDIVRRACESVSTRAA 369
Query: 401 RLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
+ AG+ ++ ++ E + + R V +DG +Y+ + ++ H +V L
Sbjct: 370 HMCSAGLAGVINRMRESRSEDVM--RITVGVDGSVYKLHPSFKERFHASVRRL 420
>pdb|3S41|A Chain A, Glucokinase In Complex With Activator And Glucose
pdb|4DHY|A Chain A, Crystal Structure Of Human Glucokinase In Complex With
Glucose And Activator
Length = 469
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 235/413 (56%), Gaps = 21/413 (5%)
Query: 50 LRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L+ V M +M GL ++ E +KM+ +YV + P G+E G F +LDLGGTNFRV+ V
Sbjct: 34 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 93
Query: 108 QLGGQEERVQA--TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR 165
++G EE + T+ + SIP++ M GT+E LFD+I+ ++ F +K H + ++
Sbjct: 94 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 148
Query: 166 EIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVN 224
+GFTFSFPV+ ID G+L+ WTKGF SG G +VV L +A++R+G +M V A+VN
Sbjct: 149 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 208
Query: 225 DTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS 284
DTV T+ Y D V +I+GTG NACY+E+M + ++G++ GR +NTEWGAF
Sbjct: 209 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWGAFG 265
Query: 285 KGLPLTEF----DRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340
L EF DR +D +S NPG+Q+YEK I G Y+GE+VR VLL++ +E LF
Sbjct: 266 DSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEAS 325
Query: 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGG 400
E+L T + ++ D + Q + G+ S +V C+++ R
Sbjct: 326 EQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDCDIVRRACESVSTRAA 383
Query: 401 RLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
+ AG+ ++ ++ E + + R V +DG +Y+ + ++ H +V L
Sbjct: 384 HMCSAGLAGVINRMRESRSEDVM--RITVGVDGSVYKLHPSFKERFHASVRRL 434
>pdb|3F9M|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose And
Activator Showing A Mobile Flap
pdb|3FGU|A Chain A, Catalytic Complex Of Human Glucokinase
pdb|3ID8|A Chain A, Ternary Complex Of Human Pancreatic Glucokinase
Crystallized With Activator, Glucose And Amp-Pnp
pdb|3IDH|A Chain A, Human Pancreatic Glucokinase In Complex With Glucose
pdb|3VEV|A Chain A, Glucokinase In Complex With An Activator And Glucose
pdb|3VF6|A Chain A, Glucokinase In Complex With Glucose And Activator
Length = 470
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 235/413 (56%), Gaps = 21/413 (5%)
Query: 50 LRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L+ V M +M GL ++ E +KM+ +YV + P G+E G F +LDLGGTNFRV+ V
Sbjct: 35 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 94
Query: 108 QLGGQEERVQA--TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR 165
++G EE + T+ + SIP++ M GT+E LFD+I+ ++ F +K H + ++
Sbjct: 95 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 149
Query: 166 EIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVN 224
+GFTFSFPV+ ID G+L+ WTKGF SG G +VV L +A++R+G +M V A+VN
Sbjct: 150 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 209
Query: 225 DTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS 284
DTV T+ Y D V +I+GTG NACY+E+M + ++G++ GR +NTEWGAF
Sbjct: 210 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWGAFG 266
Query: 285 KGLPLTEF----DRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340
L EF DR +D +S NPG+Q+YEK I G Y+GE+VR VLL++ +E LF
Sbjct: 267 DSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEAS 326
Query: 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGG 400
E+L T + ++ D + Q + G+ S +V C+++ R
Sbjct: 327 EQLRTRGAFETRFVSQVESDTGDRKQIY--NILSTLGLRPSTTDCDIVRRACESVSTRAA 384
Query: 401 RLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
+ AG+ ++ ++ E + + R V +DG +Y+ + ++ H +V L
Sbjct: 385 HMCSAGLAGVINRMRESRSEDVM--RITVGVDGSVYKLHPSFKERFHASVRRL 435
>pdb|3QIC|A Chain A, The Structure Of Human Glucokinase E339k Mutation
Length = 470
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/413 (36%), Positives = 235/413 (56%), Gaps = 21/413 (5%)
Query: 50 LRNVADAMTADMRAGLVVDGGGE--LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRV 107
L+ V M +M GL ++ E +KM+ +YV + P G+E G F +LDLGGTNFRV+ V
Sbjct: 35 LKKVMRRMQKEMDRGLRLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLV 94
Query: 108 QLGGQEERVQA--TEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQR 165
++G EE + T+ + SIP++ M GT+E LFD+I+ ++ F +K H + ++
Sbjct: 95 KVGEGEEGQWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDK-----HQMKHKKL 149
Query: 166 EIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQG-LDMRVSALVN 224
+GFTFSFPV+ ID G+L+ WTKGF SG G +VV L +A++R+G +M V A+VN
Sbjct: 150 PLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVN 209
Query: 225 DTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKSPSGRTIINTEWGAFS 284
DTV T+ Y D V +I+GTG NACY+E+M + ++G++ GR +NTEWGAF
Sbjct: 210 DTVATMISCYYEDHQCEVGMIVGTGCNACYMEEMQNVELVEGDE---GRMCVNTEWGAFG 266
Query: 285 KGLPLTEF----DRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340
L EF DR +D +S NPG+Q+YEK I G Y+GE+VR VLL++ +E LF
Sbjct: 267 DSGELDEFLLEYDRLVDESSANPGQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEAS 326
Query: 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGG 400
E+L T + ++ D + Q + G+ S +V C+++ R
Sbjct: 327 EQLRTRGAFETRFVSQVKSDTGDRKQIY--NILSTLGLRPSTTDCDIVRRACESVSTRAA 384
Query: 401 RLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTEL 453
+ AG+ ++ ++ E + + R V +DG +Y+ + ++ H +V L
Sbjct: 385 HMCSAGLAGVINRMRESRSEDVM--RITVGVDGXVYKLHPSFKERFHASVRRL 435
>pdb|1IG8|A Chain A, Crystal Structure Of Yeast Hexokinase Pii With The Correct
Amino Acid Sequence
Length = 486
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 222/430 (51%), Gaps = 26/430 (6%)
Query: 36 LTKLQKECAAPLPVLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYAL 95
+ +K P L+ V +++ GL GG + MI +V PTG E G F A+
Sbjct: 27 IENFEKIFTVPTETLQAVTKHFISELEKGLS-KKGGNIPMIPGWVMDFPTGKESGDFLAI 85
Query: 96 DLGGTNFRVLRVQLGGQEERVQATEFEQVSIPQEL-MCGTSEELFDFIATGLAKFAEKEA 154
DLGGTN RV+ V+LGG +R T + +P + +EL++FIA L F +++
Sbjct: 86 DLGGTNLRVVLVKLGG--DRTFDTTQSKYRLPDAMRTTQNPDELWEFIADSLKAFIDEQ- 142
Query: 155 GKFHLPQGRQREI--GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMER 212
PQG I GFTFSFP Q I+ G+L +WTKGF + DVV L + + +
Sbjct: 143 ----FPQGISEPIPLGFTFSFPASQNKINEGILQRWTKGFDIPNIENHDVVPMLQKQITK 198
Query: 213 QGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQGNKS--- 269
+ + + V AL+NDT GTL + Y D + + VI GTG N Y + I KLQG S
Sbjct: 199 RNIPIEVVALINDTTGTLVASYYTDPETKMGVIFGTGVNGAYYDVCSDIEKLQGKLSDDI 258
Query: 270 -PSGRTIINTEWGAFSKG---LPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVL 325
PS IN E+G+F LP T++D +D S PG+Q +EK SG YLGEI+R L
Sbjct: 259 PPSAPMAINCEYGSFDNEHVVLPRTKYDITIDEESPRPGQQTFEKMSSGYYLGEILRLAL 318
Query: 326 LKMAEEGALFGNSVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKAR 385
+ M ++G +F N K PFV+ T + +++D E+L+ + G+ ++++ R
Sbjct: 319 MDMYKQGFIFKNQDLSKFDKPFVMDTSYPARIEEDPFENLEDTDDLFQNEFGINTTVQER 378
Query: 386 KVVIEVCDTIVKRGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRY 445
K++ + + I R RL+ GI +I QK G G +A DG +Y Y ++
Sbjct: 379 KLIRRLSELIGARAARLSVCGIAAICQK-----RGYKTGH---IAADGSVYNRYPGFKEK 430
Query: 446 VHEAVTELLG 455
A+ ++ G
Sbjct: 431 AANALKDIYG 440
>pdb|3O08|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O08|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form I
pdb|3O1B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Ii
pdb|3O1W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O1W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iii
pdb|3O4W|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O4W|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Iv
pdb|3O5B|A Chain A, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O5B|B Chain B, Crystal Structure Of Dimeric Klhxk1 In Crystal Form Vii
With Glucose Bound (Open State)
pdb|3O6W|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O6W|B Chain B, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Viii
(Open State)
pdb|3O80|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Ix
(Open State)
pdb|3O8M|A Chain A, Crystal Structure Of Monomeric Klhxk1 In Crystal Form Xi
With Glucose Bound (Closed State)
Length = 485
Score = 238 bits (608), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 222/421 (52%), Gaps = 27/421 (6%)
Query: 50 LRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQL 109
+R++ +++ GL GG + MI +V PTG E G F ALDLGGTN RV+ V+L
Sbjct: 41 MRSIVKHFISELDKGLS-KKGGNIPMIPGWVVEYPTGKETGDFLALDLGGTNLRVVLVKL 99
Query: 110 GGQEERVQATEFEQVSIPQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREI-- 167
GG + T + +P L GTSE+L+ FIA L +F ++ P G +
Sbjct: 100 GGNHDF--DTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDE-----WYPDGVSEPLPL 152
Query: 168 GFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTV 227
GFTFS+P Q I+SGVL +WTKGF + G G DVV L E +E+ + + V AL+NDT
Sbjct: 153 GFTFSYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLNIPINVVALINDTT 212
Query: 228 GTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQG----NKSPSGRTIINTEWGAF 283
GTL + Y D + +I+GTG N Y + + I KL+G + P IN E+G+F
Sbjct: 213 GTLVASLYTDPQTKMGIIIGTGVNGAYYDVVSGIEKLEGLLPEDIGPDSPMAINCEYGSF 272
Query: 284 SKG---LPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGNSVP 340
LP T++D +D S PG+Q +EK SG YLGEI+R VLL + + G +F +
Sbjct: 273 DNEHLVLPRTKYDVIIDEESPRPGQQAFEKMTSGYYLGEIMRLVLLDLYDSGFIFKDQDI 332
Query: 341 EKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVKRGG 400
KL +V+ T + ++ D E+L+ +E+++ RK++ ++ + + R
Sbjct: 333 SKLKEAYVMDTSYPSKIEDDPFENLEDTDDLFKTNLNIETTVVERKLIRKLAELVGTRAA 392
Query: 401 RLAGAGIVSILQKIDEDSNGAIFGKRTV-VAMDGGLYEHYTQYRRYVHEAVTELLGTEIS 459
RL G+ +I K G +T +A DG ++ Y Y+ +A+ ++ ++
Sbjct: 393 RLTVCGVSAICDK---------RGYKTAHIAADGSVFNRYPGYKEKAAQALKDIYNWDVE 443
Query: 460 K 460
K
Sbjct: 444 K 444
>pdb|3B8A|X Chain X, Crystal Structure Of Yeast Hexokinase Pi In Complex With
Glucose
Length = 485
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 218/418 (52%), Gaps = 28/418 (6%)
Query: 49 VLRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQ 108
LR V ++ GL GG + MI +V PTG E G + A+DLGGTN RV+ V+
Sbjct: 40 TLRKVVKHFIDELNKGLT-KKGGNIPMIPGWVMEFPTGKESGNYLAIDLGGTNLRVVLVK 98
Query: 109 LGGQEERVQATEFEQVSIPQEL-MCGTSEELFDFIATGLAKF-AEKE--AGKFHLPQGRQ 164
L G T + +P ++ EEL+ FIA L F E+E K LP
Sbjct: 99 LSGN--HTFDTTQSKYKLPHDMRTTKHQEELWSFIADSLKDFMVEQELLNTKDTLP---- 152
Query: 165 REIGFTFSFPVKQTSIDSGVLIKWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVN 224
+GFTFS+P Q I+ G+L +WTKGF + G DVV L + ++ L + + AL+N
Sbjct: 153 --LGFTFSYPASQNKINEGILQRWTKGFDIPNVEGHDVVPLLQNEISKRELPIEIVALIN 210
Query: 225 DTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQG---NKSPSGRTI-INTEW 280
DTVGTL + Y D + + VI GTG N + + + I KL+G + PS + IN E+
Sbjct: 211 DTVGTLIASYYTDPETKMGVIFGTGVNGAFYDVVSDIEKLEGKLADDIPSNSPMAINCEY 270
Query: 281 GAFSKG---LPLTEFDRDMDAASINPGEQIYEKTISGMYLGEIVRRVLLKMAEEGALFGN 337
G+F LP T++D +D S PG+Q +EK SG YLGE++R VLL++ E+G + +
Sbjct: 271 GSFDNEHLVLPRTKYDVAVDEQSPRPGQQAFEKMTSGYYLGELLRLVLLELNEKGLMLKD 330
Query: 338 SVPEKLSMPFVLRTPHICAMQQDYSEDLQAVGSTLYDVAGVESSLKARKVVIEVCDTIVK 397
KL P+++ T + ++ D E+L+ GV+++L RK++ +C+ I
Sbjct: 331 QDLSKLKQPYIMDTSYPARIEDDPFENLEDTDDIFQKDFGVKTTLPERKLIRRLCELIGT 390
Query: 398 RGGRLAGAGIVSILQKIDEDSNGAIFGKRTVVAMDGGLYEHYTQYRRYVHEAVTELLG 455
R RLA GI +I QK G G +A DG +Y Y ++ + + ++ G
Sbjct: 391 RAARLAVCGIAAICQK-----RGYKTGH---IAADGSVYNKYPGFKEAAAKGLRDIYG 440
>pdb|2YHX|A Chain A, Sequencing A Protein By X-Ray Crystallography. Ii.
Refinement Of Yeast Hexokinase B Co-Ordinates And
Sequence At 2.1 Angstroms Resolution
Length = 457
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 20/188 (10%)
Query: 73 LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEE------RVQATEFEQVSI 126
+ M+ +V +G + G F A+ +GG + V+ + L G++E R A +I
Sbjct: 44 IPMVPGWVLKQVSGAQAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAI 103
Query: 127 PQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLI 186
P +L + E + +P +GFTF + + G +
Sbjct: 104 PSDLWGNXAXS------NAAFSSXEFSSXAGSVP------LGFTFXEAGAKEXVIKGQIT 151
Query: 187 KWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVIL 246
FS++ +++ + A G A + D+ G L Y D + + +I
Sbjct: 152 XQAXAFSLAXL--XKLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTDAXIKMGIIF 209
Query: 247 GTGTNACY 254
G+G NA Y
Sbjct: 210 GSGVNAAY 217
>pdb|1HKG|A Chain A, Structural Dynamics Of Yeast Hexokinase During Catalysis
Length = 457
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 20/188 (10%)
Query: 73 LKMILSYVDALPTGNERGLFYALDLGGTNFRVLRVQLGGQEE------RVQATEFEQVSI 126
+ M+ +V G++ G F A+ +GG + V+ + L G +E R A +I
Sbjct: 44 IPMVPGWVLKQVXGSQAGSFLAIVMGGGDLEVILIXLAGYQESSIXASRSLAASMXTTAI 103
Query: 127 PQELMCGTSEELFDFIATGLAKFAEKEAGKFHLPQGRQREIGFTFSFPVKQTSIDSGVLI 186
P +L + + E + +P +GFTF + + G +
Sbjct: 104 PSDLWGNXAX------SNAAFSSXEFSSXAGSVP------LGFTFXEAGAKEXVIKGQIT 151
Query: 187 KWTKGFSVSGTAGKDVVACLNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVIL 246
FS++ +++ + A G A + D+ G L Y D + + +I
Sbjct: 152 XQAXAFSLAXL--XKLISAMXNAXFPAGDXXXXVADIXDSHGILXXVNYTDAXIKMGIIF 209
Query: 247 GTGTNACY 254
G+G NA Y
Sbjct: 210 GSGVNAAY 217
>pdb|2VUG|A Chain A, The Structure Of An Archaeal Homodimeric Rna Ligase
pdb|2VUG|B Chain B, The Structure Of An Archaeal Homodimeric Rna Ligase
Length = 389
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 50 LRNVADAMTADMRAGLVVDGGGELKMILSYVDALPTGNERGL----FYALDLGGTNFRVL 105
L + + ++ + R G+++ ++K I+ YV N+ + FY L G R+
Sbjct: 221 LYQLIERLSKEGREGIIMKSP-DMKKIVKYVTPYANINDIKIGARVFYELPPGYFTSRIS 279
Query: 106 RVQLGGQEERVQATEFEQVS--IPQELMCGTSEELFD 140
R+ E+R++ EFE+V+ + L+ E +FD
Sbjct: 280 RLAFYLAEKRIKGEEFERVAKELGSALLQPFVESIFD 316
>pdb|2P0Y|A Chain A, Crystal Structure Of Q88yi3_lacpl From Lactobacillus
Plantarum. Northeast Structural Genomics Consortium
Target Lpr6
Length = 341
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 47 LPVLRNVADAMTADMRAGLVV-DGGGELKMILSYVDALPTGNERGLFYAL 95
LPV+ N D+ A + V D GG +I +YV+ +P G+ R + AL
Sbjct: 22 LPVVLNGLRKQAVDITAVVTVADDGGSSGIIRNYVNVVPPGDIRNVXVAL 71
>pdb|1DUP|A Chain A, Deoxyuridine 5'-Triphosphate Nucleotido Hydrolase
(D-Utpase)
pdb|1EU5|A Chain A, Structure Of E. Coli Dutpase At 1.45 A
pdb|1RN8|A Chain A, Crystal Structure Of Dutpase Complexed With Substrate
Analogue Imido-Dutp
pdb|1SEH|A Chain A, Crystal Structure Of E. Coli Dutpase Complexed With The
Product Dump
pdb|1DUD|A Chain A, Deoxyuridine 5'-triphosphate Nucleotide Hydrolase
(d-utpase) Complexed With The Substrate Analogue
Deoxyuridine 5'-diphosphate (d-udp)
pdb|2HR6|A Chain A, Crystal Structure Of Dutpase In Complex With Substrate
Analogue Dudp And Manganese
pdb|2HRM|A Chain A, Crystal Structure Of Dutpase Complexed With Substrate
Analogue Methylene-Dutp
Length = 152
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 192 FSVSGTAGKDVVACLNEAME 211
++ SG+AG D+ ACLN+A+E
Sbjct: 23 YATSGSAGLDLRACLNDAVE 42
>pdb|1RNJ|A Chain A, Crystal Structure Of Inactive Mutant Dutpase Complexed
With Substrate Analogue Imido-Dutp
pdb|1SYL|A Chain A, Crystal Structure Of Inactive Mutant Dutpase Complexed
With Substrate Dutp
Length = 152
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 192 FSVSGTAGKDVVACLNEAME 211
++ SG+AG D+ ACLN+A+E
Sbjct: 23 YATSGSAGLDLRACLNDAVE 42
>pdb|1EUW|A Chain A, Atomic Resolution Structure Of E. Coli Dutpase
Length = 152
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 192 FSVSGTAGKDVVACLNEAME 211
++ SG+AG D+ ACLN+A+E
Sbjct: 23 YATSGSAGLDLRACLNDAVE 42
>pdb|1U4O|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
2,6- Naphthalenedicarboxylic Acid
pdb|1U4S|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
2,6- Naphthalenedisulphonic Acid
pdb|1U5A|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
3,5- Dihydroxy-2-Naphthoic Acid
pdb|1U5C|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
3,7- Dihydroxynaphthalene-2-Carboxylic Acid And Nad+
pdb|2A94|A Chain A, Structure Of Plasmodium Falciparum Lactate Dehydrogenase
Complexed To Apadh
Length = 321
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 311 TISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSM------PFVLRTPHICAMQQDYSED 364
T+ G+ L E + L+ AE A+F +V L + P+V I M + Y +D
Sbjct: 193 TVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKD 252
Query: 365 LQAV 368
L+ V
Sbjct: 253 LKKV 256
>pdb|1XIV|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
2-({4-
Chloro-[hydroxy(Methoxy)methyl]cyclohexyl}amino)ethane-
1,1,2-Triol
Length = 323
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 311 TISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSM------PFVLRTPHICAMQQDYSED 364
T+ G+ L E + L+ AE A+F +V L + P+V I M + Y +D
Sbjct: 193 TVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKD 252
Query: 365 LQAV 368
L+ V
Sbjct: 253 LKKV 256
>pdb|1CEQ|A Chain A, Chloroquine Binds In The Cofactor Binding Site Of
Plasmodium Falciparum Lactate Dehydrogenase
Length = 316
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 311 TISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSM------PFVLRTPHICAMQQDYSED 364
T+ G+ L E + L+ AE A+F +V L + P+V I M + Y +D
Sbjct: 194 TVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKD 253
Query: 365 LQAV 368
L+ V
Sbjct: 254 LKKV 257
>pdb|1T24|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
Nad+ And 4- Hydroxy-1,2,5-Oxadiazole-3-Carboxylic Acid
pdb|1T25|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
Nadh And 3- Hydroxyisoxazole-4-Carboxylic Acid
pdb|1T26|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
Nadh And 4- Hydroxy-1,2,5-Thiadiazole-3-Carboxylic Acid
pdb|1T2C|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
Nadh
pdb|1T2D|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With
Nad+ And Oxalate
pdb|2X8L|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Apo Structure
pdb|4B7U|A Chain A, Plasmodium Falciparum L-Lactate Dehydrogenase Complexed
With Bicine
pdb|4B7U|B Chain B, Plasmodium Falciparum L-Lactate Dehydrogenase Complexed
With Bicine
pdb|4B7U|C Chain C, Plasmodium Falciparum L-Lactate Dehydrogenase Complexed
With Bicine
pdb|4B7U|D Chain D, Plasmodium Falciparum L-Lactate Dehydrogenase Complexed
With Bicine
Length = 322
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 311 TISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSM------PFVLRTPHICAMQQDYSED 364
T+ G+ L E + L+ AE A+F +V L + P+V I M + Y +D
Sbjct: 194 TVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKD 253
Query: 365 LQAV 368
L+ V
Sbjct: 254 LKKV 257
>pdb|1CET|A Chain A, Chloroquine Binds In The Cofactor Binding Site Of
Plasmodium Falciparum Lactate Dehydrogenase.
pdb|1LDG|A Chain A, Plasmodium Falciparum L-lactate Dehydrogenase Complexed
With Nadh And Oxamate
Length = 316
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 311 TISGMYLGEIVRRVLLKMAEEGALFGNSVPEKLSM------PFVLRTPHICAMQQDYSED 364
T+ G+ L E + L+ AE A+F +V L + P+V I M + Y +D
Sbjct: 194 TVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKD 253
Query: 365 LQAV 368
L+ V
Sbjct: 254 LKKV 257
>pdb|3R77|A Chain A, Crystal Structure Of The D38a Mutant Of Isochorismatase
Phzd From Pseudomonas Fluorescens 2-79 In Complex With
2-Amino-2- Desoxyisochorismate Adic
pdb|3R77|B Chain B, Crystal Structure Of The D38a Mutant Of Isochorismatase
Phzd From Pseudomonas Fluorescens 2-79 In Complex With
2-Amino-2- Desoxyisochorismate Adic
Length = 209
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 20/121 (16%)
Query: 206 LNEAMERQGLDMRVSALVNDTVGTLAGARYWDEDVMVAVILGTGTNACYVEQMDAIPKLQ 265
L AM+R L AL + VG A R W D G Y Q
Sbjct: 37 LVHAMQRYFLRPLPDALRDQVVGNAARIRQWAAD--------NGVPVAYTAQ-------P 81
Query: 266 GNKSPSGRTIINTEWGAFSKGLPLTEFDRD-MDAASINPGEQIYEKT-ISGMYLGEIVRR 323
G+ + R ++ WG K P DR+ +DA + PG+ + K S + ++++R
Sbjct: 82 GSMNEEQRGLLKDFWGPGMKASPT---DREVVDALAPQPGDWLLTKWRYSAFFNSDLLQR 138
Query: 324 V 324
+
Sbjct: 139 L 139
>pdb|4ECD|A Chain A, 2.5 Angstrom Resolution Crystal Structure Of
Bifidobacterium Longum Chorismate Synthase
pdb|4ECD|B Chain B, 2.5 Angstrom Resolution Crystal Structure Of
Bifidobacterium Longum Chorismate Synthase
Length = 398
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 221 ALVNDTVGTLAGARYWDEDVMVAVI---LGTGTNACYVEQMDAIPKLQGNK------SPS 271
ALV G AG R +D++ A+ LG G A + D + L G + SP
Sbjct: 17 ALVAMIEGLPAGVRISTDDIVSALARRRLGYGRGARMKFEQDKVRLLTGVRHGLTLGSPV 76
Query: 272 GRTIINTEWGAFSKGLPLTEFDRDM 296
I NTEW +++ + D D+
Sbjct: 77 AIEIANTEWPKWTEVMSADALDHDL 101
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,991,838
Number of Sequences: 62578
Number of extensions: 598251
Number of successful extensions: 1603
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1436
Number of HSP's gapped (non-prelim): 44
length of query: 489
length of database: 14,973,337
effective HSP length: 103
effective length of query: 386
effective length of database: 8,527,803
effective search space: 3291731958
effective search space used: 3291731958
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)