BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011285
(489 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZQE4|T194A_MOUSE Transmembrane protein 194A OS=Mus musculus GN=Tmem194a PE=1 SV=2
Length = 437
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 129/314 (41%), Gaps = 67/314 (21%)
Query: 166 FILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSS 225
F+LG+ L LS+S +FYY + M+VGI+ +L+V+F K +P +Y
Sbjct: 165 FLLGLTLFFCGDLLSRSQIFYYSTGMSVGIVASLLIVIFMISKFMPKRSP------IYVI 218
Query: 226 LIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTE 285
L+G SF L YL L+ L EI + +L+++++ G ++ F V K
Sbjct: 219 LVGGWSFSL-YLIQLVFKNLQEI------WRSYWHYLLSYILTVG-FMSFAVCYKY---- 266
Query: 286 DGSIDISTS-NFVAWSIRILAVIMILQSSLDPLLAAEALVSGVL----------VSSILR 334
G ++ S N + W++++L + ++ S P +A +V + + S R
Sbjct: 267 -GPLENERSINLLTWTLQLLGLGLMYSSIQIPHVAFALIVIALCTKNLEYPIHWLCSTYR 325
Query: 335 NFTKL-------RLLRRARKKFKIVKNFFRHSQLPDLSPFQNSCDEYMYKSPEDKFVWRW 387
K RLL ++++I L +L F N SPE W+
Sbjct: 326 RMCKASGKPVPPRLL--TEEEYRIQGEVETQKALQELREFCN--------SPECS-AWKT 374
Query: 388 SKRFSLSSCNSPLQGHSGSSPRKLSDSEIYPSAFHSTPERRKFSKEEW---ERFTRDSTE 444
R SP++ +D +FH TP ++E+ FT+D
Sbjct: 375 ISRI--------------QSPKRFAD--FVEGSFHLTPNEVSVHEQEYGLGSIFTQDEEL 418
Query: 445 RALEGLVSSPDFSK 458
+ E P F++
Sbjct: 419 SSEEEGSEYPTFTQ 432
>sp|Q8CB65|T194B_MOUSE Transmembrane protein 194B OS=Mus musculus GN=Tmem194b PE=2 SV=3
Length = 421
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 131 SPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRI-VFFILGIILMTLASSLSKSLVFYYGS 189
SP+ + L P VS+ +++ + F+ GI L A +LS+S VFYY S
Sbjct: 121 SPYGETVCFSVKPVGRLLPYIVSVSRNIVDFKLFLVFVTGIFLFLYAKTLSQSPVFYYSS 180
Query: 190 AMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSSLIGLGSFLLRYLPGLLRSILTEIG 249
+GI++ ++ VL K +P + ++ M IG F Y+ L L +
Sbjct: 181 GTVLGILMTLVFVLLMAKKHIP--KYSTFGALM----IGCW-FASVYVLCQLMEDLKWLW 233
Query: 250 IGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTEDGSIDISTSNFVAWSIRILAVIMI 309
G MY ++ +VV+ G L ++GS D+ + W++R+ ++ ++
Sbjct: 234 YGNRMY------ILGYVVVVGLCSFAACYSHGPLADEGSRDL-----LMWTLRLFSLALV 282
Query: 310 LQSSLDPLLAAEALVSGVLVSS-----ILRNFTKLRLLRR 344
P A L+ VL+ S +LR F+ LR R
Sbjct: 283 YTGVAAPQFAYAVLI--VLLFSWSLHYLLRAFSYLRWKMR 320
>sp|A7MBC7|T194A_BOVIN Transmembrane protein 194A OS=Bos taurus GN=TMEM194A PE=2 SV=1
Length = 445
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 18/161 (11%)
Query: 164 VFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMY 223
+ F+LG+ L LS+S +FYY + M+VGI+ +L+++F K +P +K+ + I
Sbjct: 165 LIFLLGLTLFFCGDLLSRSQIFYYSTGMSVGIVASLLIIIFIVSKFMP--KKSPIYII-- 220
Query: 224 SSLIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVL 283
L+G SF L YL L+ L EI + +L+++ VLA ++ F V K
Sbjct: 221 --LVGGWSFSL-YLIQLVFKNLQEI------WRCYWQYLLSY-VLAVGFMSFAVCYKYGP 270
Query: 284 TEDGSIDISTSNFVAWSIRILAVIMILQSSLDPLLAAEALV 324
E+ + N + W++++L + + S P +A +V
Sbjct: 271 LENE----RSINLLTWTLQLLGLCFMYSSIQIPHIALAIVV 307
>sp|Q5RDB4|T194A_PONAB Transmembrane protein 194A OS=Pongo abelii GN=TMEM194A PE=2 SV=1
Length = 444
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 78/145 (53%), Gaps = 20/145 (13%)
Query: 166 FILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSS 225
F+LG++L LS+S +FYY + M+VGI+ +L+++F K +P +K+ + Y
Sbjct: 167 FLLGLMLFFCGDLLSRSQIFYYSTGMSVGIVASLLIIIFILSKFMP--KKSPI----YVI 220
Query: 226 LIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKL-VLT 284
L+G SF L YL L+ L EI + +L+++++ G ++ F V K L
Sbjct: 221 LVGGWSFSL-YLIQLVFKNLQEI------WRCYWQYLLSYILTVG-FMSFAVCYKYGPLE 272
Query: 285 EDGSIDISTSNFVAWSIRILAVIMI 309
+ SID+ T W+++++ + +
Sbjct: 273 NERSIDLLT-----WTLQLMGLCFM 292
>sp|O14524|T194A_HUMAN Transmembrane protein 194A OS=Homo sapiens GN=TMEM194A PE=1 SV=2
Length = 444
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 18/144 (12%)
Query: 166 FILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSS 225
F+LG++L LS+S +FYY + M VGI+ +L+++F K +P +K+ + Y
Sbjct: 167 FLLGLMLFFCGDLLSRSQIFYYSTGMTVGIVASLLIIIFILSKFMP--KKSPI----YVI 220
Query: 226 LIGLGSFLLRYLPGLLRSILTEIGIGEDMYNPLAIFLVAFVVLAGAWLGFWVVRKLVLTE 285
L+G SF L YL L+ L EI + +L+++V+ G ++ F V K E
Sbjct: 221 LVGGWSFSL-YLIQLVFKNLQEI------WRCYWQYLLSYVLTVG-FMSFAVCYKYGPLE 272
Query: 286 DGSIDISTSNFVAWSIRILAVIMI 309
+ + N + W+++++ + +
Sbjct: 273 NE----RSINLLTWTLQLMGLCFM 292
>sp|Q28EH9|T194A_XENTR Transmembrane protein 194A OS=Xenopus tropicalis GN=tmem194a PE=2
SV=1
Length = 431
Score = 39.3 bits (90), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 166 FILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLP 211
F+ G++L +LS+S +FYY + + VG++ +L+++F KL+P
Sbjct: 157 FLCGLLLFFYGDTLSRSQIFYYSTGITVGMLASMLILVFMLSKLMP 202
>sp|P0C8N6|T194B_RAT Transmembrane protein 194B OS=Rattus norvegicus GN=Tmem194b PE=4
SV=1
Length = 421
Score = 38.9 bits (89), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 131 SPFDHKILDIRTTTSPLEPLEVSIEEEFFFYRI-VFFILGIILMTLASSLSKSLVFYYGS 189
SP+ + L VS+ +R+ + F GI L A +LS+S VFYY S
Sbjct: 121 SPYGETVCFSVKPVGSLLTYAVSVNRNVVDFRLFLVFATGIFLFFYAKTLSQSPVFYYSS 180
Query: 190 AMAVGIILVILMVLFQGMKLLP 211
+GI++ ++ VL K +P
Sbjct: 181 GTVLGILMTLVFVLLMTKKHIP 202
>sp|A6NFY4|T194B_HUMAN Transmembrane protein 194B OS=Homo sapiens GN=TMEM194B PE=2 SV=3
Length = 417
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 74/163 (45%), Gaps = 26/163 (15%)
Query: 166 FILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLPTGRKNSLAIFMYSS 225
F+ G+ L A +LS+S FYY S +G+++ ++ VL + +P YS+
Sbjct: 158 FVAGVFLFFYARTLSQSPTFYYSSGTVLGVLMTLVFVLLLVKRFIPK----------YST 207
Query: 226 LIGLGSFLLRYLPGLLRSILTEIGIGED---MYNPLAIFLVAFVVLAGAWLGFWVVRKLV 282
L + S+ + ED ++ I+++ +V++ G + F +V
Sbjct: 208 FWAL------MVGCWFASVYIVCQLMEDLKWLWYENRIYVLGYVLIVG-FFSF-----VV 255
Query: 283 LTEDGSI-DISTSNFVAWSIRILAVIMILQSSLDPLLAAEALV 324
+ G + D + + + W +R+L+++++ P A A++
Sbjct: 256 CYKHGPLADDRSRSLLMWMLRLLSLVLVYAGVAVPQFAYAAII 298
>sp|A1L3G9|T194A_XENLA Transmembrane protein 194A OS=Xenopus laevis GN=tmem194a PE=2 SV=1
Length = 434
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 31/46 (67%)
Query: 166 FILGIILMTLASSLSKSLVFYYGSAMAVGIILVILMVLFQGMKLLP 211
F+ G++L +LS+S +F+Y + + VG++ +L+++F KL+P
Sbjct: 157 FLCGLLLFFYGDTLSRSQLFFYSTGITVGMLASMLILVFMLSKLMP 202
>sp|O94278|THI5_SCHPO Thiamine repressible genes regulatory protein thi5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=thi5 PE=4 SV=1
Length = 857
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 261 FLVAFVVLAGAWLGFWVVRKLVLT-EDGSIDISTSNFVA---------WSIRILAVIMIL 310
FL A ++LGF + L E GS D ST N V+ WS+R+LA + +
Sbjct: 443 FLTGNFKCAYSYLGFAIHSAHTLGLEHGSTDNSTLNEVSTEETSIRICWSLRVLASFLYI 502
Query: 311 QSSLDPLL 318
QS + P++
Sbjct: 503 QSGITPII 510
>sp|Q2PP52|RHBL6_TOXGO Rhomboid-like protease 6 OS=Toxoplasma gondii GN=ROM6 PE=2 SV=1
Length = 531
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 351 IVKNFFRHSQLPDLSPFQNSCDEYMYKSPED 381
+ KNFFRH+ L SPF++SC ++ D
Sbjct: 57 LSKNFFRHAHLTGFSPFRSSCRRLFAQNGSD 87
>sp|Q797B3|LTAS1_BACSU Lipoteichoic acid synthase 1 OS=Bacillus subtilis (strain 168)
GN=ltaS1 PE=1 SV=1
Length = 639
Score = 32.7 bits (73), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 156 EEFFFYRIVFFILGIILMTLASSLSKSLVFYYGSAMAVGIILVIL-----MVLFQGMKLL 210
++ F Y++ FF+L +IL + LS F G IL+I V F G+ LL
Sbjct: 2 KKLFSYKLSFFVLAVILFWAKTYLSYKTEFNLGVKGTTQEILLIFNPFSSAVFFLGLALL 61
Query: 211 PTGRKNSLAIFM 222
GRK+++ + +
Sbjct: 62 AKGRKSAIIMLI 73
>sp|A9BC43|APT_PROM4 Adenine phosphoribosyltransferase OS=Prochlorococcus marinus
(strain MIT 9211) GN=apt PE=3 SV=1
Length = 172
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 25/103 (24%)
Query: 17 FSISQLVVSADDRSLVVGQYTTLRLSPGLAVENSPGIKPGAKVFCERVSIHGFSRLRDLR 76
F S +VS D R + G +++LS + V PG PG +
Sbjct: 49 FESSDAIVSIDARGFIFGTAISMKLSKPMIVARKPGKLPGELI----------------- 91
Query: 77 KFAHSLKVKVSQNSSSLRRSNVE------VCFHRNASLGVGMC 113
HS +++ QNS S+++ +E + A+ G MC
Sbjct: 92 --THSYELEYGQNSLSIQKKAIENYQSFVIVDDLLATGGTAMC 132
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,595,023
Number of Sequences: 539616
Number of extensions: 6571319
Number of successful extensions: 23750
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 23731
Number of HSP's gapped (non-prelim): 42
length of query: 489
length of database: 191,569,459
effective HSP length: 122
effective length of query: 367
effective length of database: 125,736,307
effective search space: 46145224669
effective search space used: 46145224669
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)