Query 011287
Match_columns 489
No_of_seqs 395 out of 2650
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 23:40:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011287.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011287hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0592 3-phosphoinositide-dep 100.0 6E-105 1E-109 799.1 32.6 439 40-487 68-537 (604)
2 KOG0598 Ribosomal protein S6 k 100.0 3.6E-68 7.8E-73 515.2 25.2 284 40-334 20-305 (357)
3 KOG0616 cAMP-dependent protein 100.0 3E-67 6.5E-72 493.2 23.5 273 40-325 39-311 (355)
4 KOG0605 NDR and related serine 100.0 4.9E-65 1.1E-69 511.9 25.1 294 32-328 128-462 (550)
5 KOG0694 Serine/threonine prote 100.0 8.7E-63 1.9E-67 508.0 26.1 284 40-334 363-648 (694)
6 KOG0575 Polo-like serine/threo 100.0 1.3E-60 2.8E-65 486.9 26.6 260 45-319 18-278 (592)
7 KOG0610 Putative serine/threon 100.0 8.1E-61 1.8E-65 467.8 23.5 293 38-331 70-412 (459)
8 KOG0615 Serine/threonine prote 100.0 2E-60 4.4E-65 464.3 18.4 261 43-319 170-445 (475)
9 KOG0690 Serine/threonine prote 100.0 5.4E-60 1.2E-64 448.1 14.7 290 36-335 159-449 (516)
10 KOG0581 Mitogen-activated prot 100.0 4E-56 8.6E-61 431.4 23.8 260 40-318 74-342 (364)
11 KOG0583 Serine/threonine prote 100.0 1.2E-54 2.5E-59 442.3 26.6 261 41-316 13-280 (370)
12 KOG0986 G protein-coupled rece 100.0 1.9E-55 4.2E-60 433.0 16.0 287 40-337 180-473 (591)
13 KOG0696 Serine/threonine prote 100.0 2.6E-55 5.7E-60 427.1 16.6 284 40-333 344-629 (683)
14 PTZ00263 protein kinase A cata 100.0 3.7E-53 8.1E-58 428.1 30.7 274 39-325 12-285 (329)
15 KOG0595 Serine/threonine-prote 100.0 4.5E-54 9.7E-59 420.5 23.0 257 43-316 8-273 (429)
16 KOG0588 Serine/threonine prote 100.0 3.2E-54 7E-59 441.4 22.7 265 43-323 10-275 (786)
17 KOG0612 Rho-associated, coiled 100.0 2.3E-55 5.1E-60 471.0 13.0 278 41-330 71-357 (1317)
18 KOG0580 Serine/threonine prote 100.0 1.5E-54 3.2E-59 396.8 14.5 262 38-316 15-278 (281)
19 cd05612 STKc_PRKX_like Catalyt 100.0 2E-52 4.4E-57 415.3 26.7 267 45-324 1-267 (291)
20 KOG0593 Predicted protein kina 100.0 6.5E-54 1.4E-58 403.9 14.3 258 44-318 1-291 (396)
21 cd05571 STKc_PKB Catalytic dom 100.0 9E-52 2E-56 416.9 30.2 264 51-324 1-264 (323)
22 PTZ00426 cAMP-dependent protei 100.0 7.4E-52 1.6E-56 420.6 29.4 273 40-325 25-298 (340)
23 KOG0591 NIMA (never in mitosis 100.0 1.8E-54 3.9E-59 404.0 8.9 250 40-300 14-275 (375)
24 KOG0661 MAPK related serine/th 100.0 1.3E-53 2.8E-58 423.2 14.1 257 41-316 6-296 (538)
25 KOG0614 cGMP-dependent protein 100.0 2.1E-54 4.6E-59 430.0 8.0 290 33-333 408-700 (732)
26 cd05628 STKc_NDR1 Catalytic do 100.0 4.2E-51 9.1E-56 418.7 30.0 279 45-326 1-308 (363)
27 cd05587 STKc_cPKC Catalytic do 100.0 7.1E-51 1.5E-55 410.4 30.6 270 46-325 1-271 (324)
28 cd05616 STKc_cPKC_beta Catalyt 100.0 7.1E-51 1.5E-55 410.3 29.6 270 46-325 1-271 (323)
29 cd05631 STKc_GRK4 Catalytic do 100.0 6.5E-51 1.4E-55 403.1 27.9 276 46-332 1-283 (285)
30 cd05599 STKc_NDR_like Catalyti 100.0 6.5E-51 1.4E-55 417.1 28.3 281 45-328 1-313 (364)
31 KOG0597 Serine-threonine prote 100.0 1.4E-52 3.1E-57 421.6 15.4 256 44-316 1-256 (808)
32 KOG0600 Cdc2-related protein k 100.0 1.5E-51 3.2E-56 411.2 21.9 259 41-315 113-404 (560)
33 cd05615 STKc_cPKC_alpha Cataly 100.0 2.1E-50 4.5E-55 407.0 29.2 270 46-325 1-271 (323)
34 cd05593 STKc_PKB_gamma Catalyt 100.0 1.9E-50 4E-55 408.3 28.8 264 51-324 1-264 (328)
35 cd05629 STKc_NDR_like_fungal C 100.0 1.3E-50 2.7E-55 417.2 28.0 282 45-329 1-323 (377)
36 cd05590 STKc_nPKC_eta Catalyti 100.0 3.6E-50 7.8E-55 404.8 30.6 264 51-324 1-266 (320)
37 cd05626 STKc_LATS2 Catalytic d 100.0 2.8E-50 6.1E-55 415.3 30.1 280 45-329 1-323 (381)
38 cd05585 STKc_YPK1_like Catalyt 100.0 2.7E-50 5.8E-55 404.1 29.1 260 53-324 1-260 (312)
39 cd05627 STKc_NDR2 Catalytic do 100.0 1.6E-50 3.4E-55 413.9 27.7 278 45-325 1-307 (360)
40 PTZ00267 NIMA-related protein 100.0 8.6E-50 1.9E-54 423.3 34.2 393 44-487 66-476 (478)
41 cd05589 STKc_PKN Catalytic dom 100.0 5.3E-50 1.2E-54 404.1 30.0 267 47-324 1-270 (324)
42 cd05595 STKc_PKB_beta Catalyti 100.0 3.2E-50 6.9E-55 405.7 27.7 264 51-324 1-264 (323)
43 cd05625 STKc_LATS1 Catalytic d 100.0 5.2E-50 1.1E-54 413.3 29.2 280 45-327 1-321 (382)
44 cd05594 STKc_PKB_alpha Catalyt 100.0 8E-50 1.7E-54 403.0 29.2 264 51-324 1-265 (325)
45 KOG0608 Warts/lats-like serine 100.0 1.5E-51 3.3E-56 417.9 16.6 296 32-330 616-947 (1034)
46 KOG0585 Ca2+/calmodulin-depend 100.0 5.1E-51 1.1E-55 404.2 19.7 269 37-316 89-377 (576)
47 KOG0695 Serine/threonine prote 100.0 2.5E-51 5.3E-56 390.5 16.6 284 40-333 245-539 (593)
48 cd05591 STKc_nPKC_epsilon Cata 100.0 7.3E-50 1.6E-54 402.6 28.2 264 51-324 1-267 (321)
49 cd05598 STKc_LATS Catalytic do 100.0 9.4E-50 2E-54 410.4 29.2 277 45-324 1-314 (376)
50 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.5E-50 9.7E-55 408.2 26.3 278 45-328 1-302 (350)
51 cd05588 STKc_aPKC Catalytic do 100.0 9.4E-50 2E-54 403.3 28.4 264 51-324 1-275 (329)
52 KOG0033 Ca2+/calmodulin-depend 100.0 1.2E-52 2.7E-57 384.7 6.6 256 44-316 10-272 (355)
53 cd05575 STKc_SGK Catalytic dom 100.0 2.3E-49 5.1E-54 399.2 30.1 263 51-324 1-264 (323)
54 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.3E-49 4.9E-54 400.9 29.6 266 45-328 1-274 (333)
55 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-49 3.2E-54 401.6 28.1 269 45-328 1-280 (330)
56 cd05618 STKc_aPKC_iota Catalyt 100.0 1.9E-49 4E-54 401.2 28.7 264 51-324 1-275 (329)
57 cd05592 STKc_nPKC_theta_delta 100.0 2.1E-49 4.6E-54 398.5 28.5 261 51-325 1-262 (316)
58 cd05620 STKc_nPKC_delta Cataly 100.0 3.3E-49 7.2E-54 397.0 29.8 260 51-324 1-261 (316)
59 cd05570 STKc_PKC Catalytic dom 100.0 5.5E-49 1.2E-53 395.8 30.5 264 51-324 1-265 (318)
60 cd05617 STKc_aPKC_zeta Catalyt 100.0 4.8E-49 1E-53 397.8 30.0 265 51-325 1-274 (327)
61 cd05604 STKc_SGK3 Catalytic do 100.0 4.3E-49 9.3E-54 397.6 29.4 264 51-325 1-265 (325)
62 KOG0611 Predicted serine/threo 100.0 7.5E-51 1.6E-55 395.2 15.0 257 41-314 49-306 (668)
63 cd05603 STKc_SGK2 Catalytic do 100.0 8.6E-49 1.9E-53 394.7 30.5 263 51-324 1-264 (321)
64 cd05614 STKc_MSK2_N N-terminal 100.0 7E-49 1.5E-53 397.0 29.9 270 46-324 1-280 (332)
65 KOG0198 MEKK and related serin 100.0 3.4E-50 7.4E-55 395.4 19.6 259 44-317 16-282 (313)
66 cd05584 STKc_p70S6K Catalytic 100.0 9.4E-49 2E-53 394.9 30.0 265 50-324 1-269 (323)
67 KOG0032 Ca2+/calmodulin-depend 100.0 2.6E-49 5.6E-54 403.1 26.0 258 43-317 33-299 (382)
68 cd05602 STKc_SGK1 Catalytic do 100.0 5.1E-49 1.1E-53 397.1 27.8 264 51-325 1-265 (325)
69 KOG0659 Cdk activating kinase 100.0 1.1E-49 2.3E-54 369.7 20.4 255 45-316 2-286 (318)
70 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-48 2.4E-53 393.3 28.1 260 51-324 1-261 (316)
71 PTZ00283 serine/threonine prot 100.0 4E-49 8.6E-54 419.3 26.1 265 38-316 25-302 (496)
72 cd05582 STKc_RSK_N N-terminal 100.0 5.3E-49 1.2E-53 395.6 25.2 264 50-324 1-267 (318)
73 cd05596 STKc_ROCK Catalytic do 100.0 8.8E-49 1.9E-53 402.6 27.2 267 40-321 38-314 (370)
74 KOG0663 Protein kinase PITSLRE 100.0 1.7E-49 3.8E-54 378.5 20.3 259 42-317 73-367 (419)
75 cd05597 STKc_DMPK_like Catalyt 100.0 4.6E-48 1E-52 391.3 31.6 270 45-328 1-283 (331)
76 cd05608 STKc_GRK1 Catalytic do 100.0 9.9E-49 2.1E-53 386.5 25.9 262 53-324 1-270 (280)
77 cd05621 STKc_ROCK2 Catalytic d 100.0 1.6E-48 3.5E-53 400.6 28.3 266 41-321 39-314 (370)
78 cd05624 STKc_MRCK_beta Catalyt 100.0 3E-48 6.4E-53 392.7 29.6 273 45-329 1-284 (331)
79 cd05623 STKc_MRCK_alpha Cataly 100.0 3.7E-48 7.9E-53 392.1 30.0 271 45-329 1-284 (332)
80 cd05605 STKc_GRK4_like Catalyt 100.0 3.3E-48 7.3E-53 383.7 28.6 268 46-324 1-274 (285)
81 cd05586 STKc_Sck1_like Catalyt 100.0 1.9E-48 4E-53 393.7 26.7 262 53-325 1-267 (330)
82 KOG0582 Ste20-like serine/thre 100.0 3.3E-48 7.1E-53 382.1 26.4 266 41-319 22-301 (516)
83 cd05622 STKc_ROCK1 Catalytic d 100.0 6.3E-48 1.4E-52 396.4 28.8 268 40-320 38-313 (371)
84 KOG4717 Serine/threonine prote 100.0 2.2E-49 4.8E-54 394.4 17.1 259 45-320 18-279 (864)
85 KOG0660 Mitogen-activated prot 100.0 8.1E-49 1.8E-53 379.0 20.5 259 45-318 22-317 (359)
86 KOG0599 Phosphorylase kinase g 100.0 4.2E-50 9.1E-55 373.1 10.7 258 44-317 16-289 (411)
87 KOG0578 p21-activated serine/t 100.0 8.2E-49 1.8E-53 397.5 18.2 252 45-315 273-527 (550)
88 cd05580 STKc_PKA Catalytic dom 100.0 8.3E-47 1.8E-51 374.4 30.4 267 45-324 1-267 (290)
89 cd07848 STKc_CDKL5 Catalytic d 100.0 2.1E-47 4.6E-52 377.4 25.8 255 45-314 1-287 (287)
90 cd05630 STKc_GRK6 Catalytic do 100.0 5.4E-47 1.2E-51 375.2 27.9 276 46-332 1-283 (285)
91 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.4E-47 9.5E-52 378.9 25.9 258 44-319 4-296 (303)
92 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.8E-47 1E-51 376.0 26.0 254 43-314 3-288 (288)
93 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-47 2.9E-52 371.5 21.1 258 44-318 10-309 (323)
94 cd05607 STKc_GRK7 Catalytic do 100.0 7.6E-47 1.6E-51 372.5 26.3 262 53-326 1-269 (277)
95 cd05632 STKc_GRK5 Catalytic do 100.0 2E-46 4.4E-51 371.0 28.9 275 46-331 1-282 (285)
96 cd05574 STKc_phototropin_like 100.0 2.5E-46 5.4E-51 375.3 28.5 285 45-330 1-308 (316)
97 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.8E-46 3.9E-51 379.4 26.9 260 46-319 1-298 (338)
98 KOG0658 Glycogen synthase kina 100.0 2.6E-47 5.7E-52 369.2 17.9 251 44-318 23-313 (364)
99 KOG0589 Serine/threonine prote 100.0 4.1E-47 8.9E-52 382.9 17.5 257 43-315 2-262 (426)
100 PLN00034 mitogen-activated pro 100.0 6.8E-46 1.5E-50 378.7 26.1 259 38-317 67-334 (353)
101 cd06649 PKc_MEK2 Catalytic dom 100.0 1.4E-45 3E-50 373.1 28.1 258 42-318 2-308 (331)
102 PTZ00036 glycogen synthase kin 100.0 8.6E-46 1.9E-50 388.6 26.7 254 42-319 63-359 (440)
103 KOG0586 Serine/threonine prote 100.0 1.8E-46 4E-51 383.4 20.4 260 40-316 51-311 (596)
104 KOG0667 Dual-specificity tyros 100.0 5.9E-46 1.3E-50 383.2 23.5 250 46-318 187-509 (586)
105 PHA03212 serine/threonine kina 100.0 1.6E-45 3.5E-50 380.9 25.7 252 42-317 89-382 (391)
106 cd05633 STKc_GRK3 Catalytic do 100.0 4.2E-45 9.2E-50 360.5 27.4 262 52-325 1-269 (279)
107 KOG0607 MAP kinase-interacting 100.0 8.7E-47 1.9E-51 357.7 14.4 260 50-320 83-370 (463)
108 KOG0201 Serine/threonine prote 100.0 8.5E-48 1.8E-52 379.0 7.4 256 45-317 13-269 (467)
109 PTZ00284 protein kinase; Provi 100.0 3.6E-45 7.8E-50 387.1 27.6 251 44-317 128-444 (467)
110 cd07862 STKc_CDK6 Catalytic do 100.0 4E-45 8.6E-50 361.7 26.1 252 45-314 1-290 (290)
111 cd07853 STKc_NLK Catalytic dom 100.0 2E-45 4.3E-50 377.9 24.6 258 46-319 1-296 (372)
112 cd05609 STKc_MAST Catalytic do 100.0 1.9E-44 4.2E-49 360.1 30.3 280 45-326 1-288 (305)
113 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.4E-45 1.2E-49 364.8 25.4 257 43-317 4-292 (309)
114 cd06625 STKc_MEKK3_like Cataly 100.0 1.1E-44 2.4E-49 352.7 26.9 258 45-314 2-263 (263)
115 cd07876 STKc_JNK2 Catalytic do 100.0 1.1E-44 2.3E-49 370.6 27.8 254 43-316 19-320 (359)
116 cd05577 STKc_GRK Catalytic dom 100.0 6.7E-45 1.5E-49 358.1 25.2 261 53-324 1-267 (277)
117 cd05572 STKc_cGK_PKG Catalytic 100.0 1.1E-44 2.4E-49 353.1 25.9 257 53-320 1-261 (262)
118 cd07863 STKc_CDK4 Catalytic do 100.0 1.4E-44 2.9E-49 357.3 26.1 251 46-314 1-288 (288)
119 cd05606 STKc_beta_ARK Catalyti 100.0 2.6E-44 5.7E-49 354.5 27.4 264 52-327 1-271 (278)
120 cd07875 STKc_JNK1 Catalytic do 100.0 1.9E-44 4.2E-49 369.4 27.0 254 43-316 22-323 (364)
121 cd06650 PKc_MEK1 Catalytic dom 100.0 2.2E-44 4.7E-49 364.8 25.9 256 43-317 3-305 (333)
122 PHA03207 serine/threonine kina 100.0 3.1E-44 6.7E-49 371.7 27.4 258 44-323 91-387 (392)
123 cd07874 STKc_JNK3 Catalytic do 100.0 3.5E-44 7.6E-49 366.1 26.8 254 43-316 15-316 (355)
124 PF00069 Pkinase: Protein kina 100.0 4.9E-45 1.1E-49 354.0 19.4 252 47-314 1-260 (260)
125 KOG0192 Tyrosine kinase specif 100.0 2E-44 4.3E-49 364.4 24.5 251 38-301 34-294 (362)
126 cd05611 STKc_Rim15_like Cataly 100.0 3.4E-44 7.4E-49 349.2 25.1 254 51-320 2-260 (260)
127 cd05581 STKc_PDK1 Catalytic do 100.0 2.9E-44 6.3E-49 352.5 24.7 269 45-314 1-280 (280)
128 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.4E-44 5.2E-49 365.5 23.6 253 44-317 14-304 (343)
129 cd07873 STKc_PCTAIRE1 Catalyti 100.0 8E-44 1.7E-48 354.8 26.7 258 43-318 4-293 (301)
130 KOG0604 MAP kinase-activated p 100.0 2.3E-45 4.9E-50 345.6 14.5 251 43-317 59-328 (400)
131 cd08223 STKc_Nek4 Catalytic do 100.0 1.6E-43 3.5E-48 343.3 27.9 253 46-314 1-257 (257)
132 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.1E-43 2.3E-48 346.9 26.8 260 46-314 1-267 (267)
133 cd05578 STKc_Yank1 Catalytic d 100.0 5.8E-44 1.3E-48 347.1 23.8 255 46-314 1-258 (258)
134 cd06644 STKc_STK10_LOK Catalyt 100.0 8.6E-44 1.9E-48 352.9 24.5 261 45-323 12-281 (292)
135 cd05579 STKc_MAST_like Catalyt 100.0 1.1E-43 2.3E-48 345.0 24.6 263 53-319 1-265 (265)
136 cd05102 PTKc_VEGFR3 Catalytic 100.0 6.1E-44 1.3E-48 361.7 23.8 249 42-300 4-324 (338)
137 cd06615 PKc_MEK Catalytic doma 100.0 2.2E-43 4.9E-48 353.2 26.9 253 45-316 1-292 (308)
138 cd05613 STKc_MSK1_N N-terminal 100.0 3.7E-43 8.1E-48 347.8 27.8 270 46-324 1-281 (290)
139 cd06645 STKc_MAP4K3 Catalytic 100.0 1E-43 2.2E-48 347.2 22.7 253 43-313 7-267 (267)
140 cd08529 STKc_FA2-like Catalyti 100.0 6.5E-43 1.4E-47 338.6 27.8 253 46-314 1-256 (256)
141 cd06611 STKc_SLK_like Catalyti 100.0 1.9E-43 4.2E-48 347.9 23.9 257 44-318 4-269 (280)
142 PHA02988 hypothetical protein; 100.0 2.4E-43 5.1E-48 349.1 24.6 244 42-300 15-269 (283)
143 cd06631 STKc_YSK4 Catalytic do 100.0 4.8E-43 1E-47 342.0 26.2 259 46-314 1-265 (265)
144 cd08227 PK_STRAD_alpha Pseudok 100.0 2.3E-43 5.1E-48 356.0 24.6 262 48-318 1-314 (327)
145 cd07861 STKc_CDK1_euk Catalyti 100.0 4.3E-43 9.3E-48 345.8 25.8 252 46-314 1-285 (285)
146 cd06652 STKc_MEKK2 Catalytic d 100.0 9.2E-43 2E-47 340.3 27.9 259 44-315 1-265 (265)
147 cd07868 STKc_CDK8 Catalytic do 100.0 2.8E-43 6.1E-48 353.3 24.4 247 50-314 6-317 (317)
148 cd06651 STKc_MEKK3 Catalytic d 100.0 8E-43 1.7E-47 341.1 26.9 258 45-315 2-265 (266)
149 cd06646 STKc_MAP4K5 Catalytic 100.0 3.3E-43 7.1E-48 343.6 24.1 253 43-313 7-267 (267)
150 cd06630 STKc_MEKK1 Catalytic d 100.0 3.2E-43 6.9E-48 343.4 24.0 259 46-315 1-268 (268)
151 KOG1989 ARK protein kinase fam 100.0 3E-44 6.5E-49 381.3 17.8 252 43-302 35-303 (738)
152 cd05610 STKc_MASTL Catalytic d 100.0 9E-43 2E-47 382.7 29.8 152 43-194 2-153 (669)
153 cd06643 STKc_SLK Catalytic dom 100.0 6.3E-43 1.4E-47 344.8 25.7 252 47-316 7-267 (282)
154 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.1E-42 2.3E-47 343.0 27.3 254 45-314 1-286 (286)
155 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.1E-42 2.5E-47 338.8 26.7 257 45-314 1-267 (267)
156 cd06654 STKc_PAK1 Catalytic do 100.0 1.1E-42 2.3E-47 346.4 26.8 254 44-316 19-275 (296)
157 cd06619 PKc_MKK5 Catalytic dom 100.0 9.1E-43 2E-47 343.5 26.0 251 45-318 1-260 (279)
158 cd06655 STKc_PAK2 Catalytic do 100.0 1E-42 2.2E-47 346.5 26.6 254 45-317 19-275 (296)
159 cd05583 STKc_MSK_N N-terminal 100.0 9.1E-43 2E-47 344.7 25.8 269 46-325 1-280 (288)
160 cd06609 STKc_MST3_like Catalyt 100.0 6.5E-43 1.4E-47 343.0 24.5 256 45-318 1-258 (274)
161 PHA03209 serine/threonine kina 100.0 3.5E-43 7.5E-48 359.4 23.2 250 42-317 63-357 (357)
162 cd05061 PTKc_InsR Catalytic do 100.0 1.3E-42 2.8E-47 344.0 26.4 266 43-319 4-288 (288)
163 KOG0579 Ste20-like serine/thre 100.0 6.8E-45 1.5E-49 369.2 10.2 257 46-320 33-298 (1187)
164 cd08218 STKc_Nek1 Catalytic do 100.0 2.1E-42 4.5E-47 335.6 27.0 253 46-314 1-256 (256)
165 cd06613 STKc_MAP4K3_like Catal 100.0 1.8E-42 3.9E-47 336.7 26.5 252 44-313 2-262 (262)
166 PTZ00266 NIMA-related protein 100.0 1.1E-42 2.4E-47 383.6 27.2 262 41-319 9-303 (1021)
167 cd07839 STKc_CDK5 Catalytic do 100.0 4.3E-43 9.4E-48 345.9 21.4 252 46-314 1-284 (284)
168 cd08221 STKc_Nek9 Catalytic do 100.0 4.5E-42 9.7E-47 333.3 27.9 253 46-314 1-256 (256)
169 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 9.2E-43 2E-47 344.1 23.3 254 45-317 1-268 (286)
170 cd06656 STKc_PAK3 Catalytic do 100.0 1.1E-42 2.4E-47 346.4 24.0 254 44-316 18-274 (297)
171 cd08219 STKc_Nek3 Catalytic do 100.0 3.5E-42 7.7E-47 334.0 26.9 248 46-310 1-251 (255)
172 cd07845 STKc_CDK10 Catalytic d 100.0 3.9E-42 8.4E-47 344.0 27.5 258 43-317 5-296 (309)
173 cd07832 STKc_CCRK Catalytic do 100.0 3.2E-42 6.9E-47 339.6 26.2 254 46-315 1-286 (286)
174 cd05048 PTKc_Ror Catalytic Dom 100.0 1.5E-42 3.3E-47 341.9 23.8 254 42-310 2-278 (283)
175 cd07841 STKc_CDK7 Catalytic do 100.0 2.8E-42 6.1E-47 342.7 25.3 255 46-316 1-287 (298)
176 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.9E-42 8.4E-47 336.6 25.8 248 42-300 2-255 (266)
177 cd08217 STKc_Nek2 Catalytic do 100.0 5.6E-42 1.2E-46 332.9 26.7 253 46-314 1-265 (265)
178 cd06637 STKc_TNIK Catalytic do 100.0 2.7E-42 5.9E-47 337.8 24.6 251 45-314 6-272 (272)
179 PHA03390 pk1 serine/threonine- 100.0 2.7E-42 5.9E-47 338.3 24.4 246 45-316 14-267 (267)
180 PHA03211 serine/threonine kina 100.0 2.4E-42 5.2E-47 362.8 25.5 250 44-316 168-460 (461)
181 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.6E-42 3.5E-47 341.9 22.7 254 45-314 1-286 (286)
182 cd06639 STKc_myosinIIIB Cataly 100.0 8.5E-42 1.9E-46 338.2 27.9 253 44-315 21-291 (291)
183 cd06623 PKc_MAPKK_plant_like C 100.0 6.5E-42 1.4E-46 332.9 26.6 257 45-318 1-263 (264)
184 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.8E-42 1.5E-46 335.2 26.7 256 46-314 2-272 (272)
185 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.3E-41 2.7E-46 332.3 28.5 257 45-314 2-264 (264)
186 cd06612 STKc_MST1_2 Catalytic 100.0 3.4E-42 7.3E-47 333.6 23.9 251 44-314 2-256 (256)
187 cd06632 STKc_MEKK1_plant Catal 100.0 7.5E-42 1.6E-46 331.3 26.3 253 46-314 1-258 (258)
188 cd05106 PTKc_CSF-1R Catalytic 100.0 1.8E-42 3.9E-47 356.3 23.0 250 42-301 35-363 (374)
189 cd08220 STKc_Nek8 Catalytic do 100.0 1.1E-41 2.4E-46 330.0 27.2 252 46-314 1-256 (256)
190 cd06608 STKc_myosinIII_like Ca 100.0 6.2E-42 1.3E-46 334.8 25.3 252 44-314 5-275 (275)
191 KOG0596 Dual specificity; seri 100.0 7.5E-43 1.6E-47 351.4 18.8 258 42-316 358-632 (677)
192 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.7E-42 8.1E-47 339.8 23.4 256 42-316 2-271 (284)
193 cd05096 PTKc_DDR1 Catalytic do 100.0 7.3E-42 1.6E-46 341.2 25.7 249 42-300 2-295 (304)
194 cd07850 STKc_JNK Catalytic dom 100.0 8.4E-42 1.8E-46 348.4 26.5 253 44-316 15-316 (353)
195 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.2E-41 2.6E-46 335.2 26.6 256 45-319 1-269 (283)
196 cd06638 STKc_myosinIIIA Cataly 100.0 8.9E-42 1.9E-46 336.8 25.7 253 43-314 16-286 (286)
197 cd07833 STKc_CDKL Catalytic do 100.0 7.5E-42 1.6E-46 337.3 25.1 255 45-314 1-288 (288)
198 cd05123 STKc_AGC Catalytic dom 100.0 8.1E-42 1.8E-46 329.8 24.8 250 53-314 1-250 (250)
199 cd07867 STKc_CDC2L6 Catalytic 100.0 3.8E-42 8.1E-47 344.8 23.2 248 49-314 5-317 (317)
200 cd05052 PTKc_Abl Catalytic dom 100.0 1.3E-41 2.9E-46 331.9 26.1 246 42-300 3-252 (263)
201 cd06640 STKc_MST4 Catalytic do 100.0 5E-42 1.1E-46 337.7 23.2 256 45-318 4-260 (277)
202 cd05104 PTKc_Kit Catalytic dom 100.0 3.8E-42 8.3E-47 354.0 23.4 253 43-310 33-369 (375)
203 cd05093 PTKc_TrkB Catalytic do 100.0 1.1E-41 2.3E-46 337.4 25.7 249 42-301 2-270 (288)
204 cd07844 STKc_PCTAIRE_like Cata 100.0 1.4E-41 3E-46 336.5 26.3 254 43-314 3-291 (291)
205 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.1E-41 2.3E-46 335.9 25.1 252 44-314 15-282 (282)
206 cd06626 STKc_MEKK4 Catalytic d 100.0 2.8E-41 6E-46 328.7 27.7 257 46-314 1-264 (264)
207 KOG4236 Serine/threonine prote 100.0 2.8E-43 6.1E-48 351.6 13.7 254 50-323 569-832 (888)
208 cd05088 PTKc_Tie2 Catalytic do 100.0 9E-42 2E-46 340.8 24.7 252 41-310 3-275 (303)
209 cd06627 STKc_Cdc7_like Catalyt 100.0 4.2E-41 9E-46 325.0 28.2 253 46-314 1-254 (254)
210 cd07860 STKc_CDK2_3 Catalytic 100.0 7.9E-42 1.7E-46 336.9 23.4 252 46-314 1-284 (284)
211 cd05090 PTKc_Ror1 Catalytic do 100.0 1.6E-41 3.5E-46 334.9 25.5 254 42-310 2-278 (283)
212 cd06605 PKc_MAPKK Catalytic do 100.0 4.7E-42 1E-46 334.6 21.0 253 45-316 1-262 (265)
213 PHA03210 serine/threonine kina 100.0 4.4E-42 9.5E-47 366.0 22.6 264 44-322 147-465 (501)
214 cd07843 STKc_CDC2L1 Catalytic 100.0 1.1E-41 2.4E-46 337.8 24.0 255 43-314 3-293 (293)
215 cd07865 STKc_CDK9 Catalytic do 100.0 2.6E-41 5.6E-46 337.0 26.5 258 44-314 11-310 (310)
216 cd06648 STKc_PAK_II Catalytic 100.0 3.8E-41 8.2E-46 333.3 27.5 253 46-317 20-275 (285)
217 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.2E-41 4.8E-46 328.8 25.0 248 43-309 2-252 (256)
218 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-41 2.3E-46 344.9 23.5 260 45-317 5-300 (334)
219 cd06658 STKc_PAK5 Catalytic do 100.0 6E-42 1.3E-46 340.4 21.2 253 45-316 22-277 (292)
220 cd06641 STKc_MST3 Catalytic do 100.0 2.4E-41 5.2E-46 332.8 25.2 253 46-316 5-258 (277)
221 KOG4279 Serine/threonine prote 100.0 2E-42 4.4E-47 354.4 18.0 249 51-317 581-838 (1226)
222 cd07831 STKc_MOK Catalytic dom 100.0 2.7E-41 5.9E-46 332.2 25.4 248 47-314 1-282 (282)
223 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.8E-41 8.3E-46 333.6 26.6 253 44-314 4-291 (291)
224 cd05049 PTKc_Trk Catalytic dom 100.0 1.4E-41 3E-46 334.3 23.1 248 43-300 3-271 (280)
225 cd07837 STKc_CdkB_plant Cataly 100.0 3.9E-41 8.4E-46 333.8 26.1 254 45-315 1-295 (295)
226 PLN00009 cyclin-dependent kina 100.0 2.3E-41 5E-46 335.7 24.3 258 44-318 1-291 (294)
227 cd06624 STKc_ASK Catalytic dom 100.0 6.1E-41 1.3E-45 328.0 26.7 253 44-314 7-268 (268)
228 cd08225 STKc_Nek5 Catalytic do 100.0 3.4E-41 7.4E-46 326.8 24.6 253 46-314 1-257 (257)
229 cd08228 STKc_Nek6 Catalytic do 100.0 4.2E-41 9E-46 328.5 25.2 252 44-310 1-260 (267)
230 cd06659 STKc_PAK6 Catalytic do 100.0 1.7E-41 3.6E-46 338.0 22.8 254 45-317 21-277 (297)
231 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.7E-41 1E-45 341.7 26.5 253 44-317 14-304 (343)
232 cd07836 STKc_Pho85 Catalytic d 100.0 3.7E-41 7.9E-46 331.9 24.9 251 46-314 1-284 (284)
233 KOG0577 Serine/threonine prote 100.0 7.4E-43 1.6E-47 352.7 13.0 251 46-316 27-283 (948)
234 cd07849 STKc_ERK1_2_like Catal 100.0 4.3E-41 9.4E-46 340.7 26.1 258 44-317 4-298 (336)
235 cd05032 PTKc_InsR_like Catalyt 100.0 5E-41 1.1E-45 329.7 25.7 253 42-309 3-272 (277)
236 KOG0603 Ribosomal protein S6 k 100.0 1.4E-42 3E-47 356.7 15.2 244 43-314 320-566 (612)
237 cd06606 STKc_MAPKKK Catalytic 100.0 1E-40 2.2E-45 322.1 27.4 255 46-314 1-260 (260)
238 cd08215 STKc_Nek Catalytic dom 100.0 9.9E-41 2.1E-45 322.5 27.3 253 46-314 1-258 (258)
239 PRK13184 pknD serine/threonine 100.0 5.1E-41 1.1E-45 369.0 28.2 258 44-301 1-280 (932)
240 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.3E-41 7.2E-46 341.8 24.6 257 44-317 4-297 (337)
241 cd06607 STKc_TAO Catalytic dom 100.0 6E-41 1.3E-45 335.2 25.9 252 45-316 15-272 (307)
242 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.2E-42 9.2E-47 338.0 17.3 256 45-318 4-260 (277)
243 cd05072 PTKc_Lyn Catalytic dom 100.0 6.1E-41 1.3E-45 326.4 25.1 245 42-300 3-251 (261)
244 cd05084 PTKc_Fes Catalytic dom 100.0 4.4E-41 9.5E-46 325.8 23.9 240 51-300 1-243 (252)
245 cd07842 STKc_CDK8_like Catalyt 100.0 4.1E-41 8.9E-46 336.7 24.3 256 46-314 1-316 (316)
246 cd05033 PTKc_EphR Catalytic do 100.0 8.8E-41 1.9E-45 326.5 26.0 253 43-310 2-260 (266)
247 KOG0574 STE20-like serine/thre 100.0 2.9E-44 6.3E-49 337.9 0.9 255 45-319 33-291 (502)
248 cd05062 PTKc_IGF-1R Catalytic 100.0 6.7E-41 1.4E-45 329.5 24.8 253 43-310 4-273 (277)
249 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.8E-41 1.5E-45 329.6 24.8 255 42-311 3-274 (277)
250 cd06616 PKc_MKK4 Catalytic dom 100.0 2.1E-41 4.6E-46 334.7 21.2 260 43-321 2-277 (288)
251 cd06614 STKc_PAK Catalytic dom 100.0 7.2E-41 1.6E-45 330.8 25.0 258 44-320 18-279 (286)
252 cd05576 STKc_RPK118_like Catal 100.0 2.1E-41 4.6E-46 326.0 20.6 234 56-314 4-237 (237)
253 KOG0197 Tyrosine kinases [Sign 100.0 1.2E-41 2.5E-46 344.5 19.4 244 43-300 204-451 (468)
254 cd06647 STKc_PAK_I Catalytic d 100.0 3.5E-41 7.5E-46 335.0 22.5 255 44-317 18-275 (293)
255 cd00192 PTKc Catalytic domain 100.0 9.9E-41 2.2E-45 323.3 25.1 246 51-311 1-260 (262)
256 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2E-40 4.4E-45 328.1 27.8 255 45-318 1-273 (287)
257 cd06635 STKc_TAO1 Catalytic do 100.0 1.4E-40 3.1E-45 334.3 26.8 252 45-316 25-282 (317)
258 KOG0662 Cyclin-dependent kinas 100.0 5.5E-42 1.2E-46 301.6 14.3 256 45-317 2-289 (292)
259 cd06917 STKc_NAK1_like Catalyt 100.0 6.9E-41 1.5E-45 329.0 23.8 255 46-318 2-262 (277)
260 cd05059 PTKc_Tec_like Catalyti 100.0 7.1E-41 1.5E-45 325.5 23.6 248 44-310 3-253 (256)
261 cd05091 PTKc_Ror2 Catalytic do 100.0 4.1E-41 8.9E-46 331.8 22.2 254 42-310 2-278 (283)
262 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.6E-40 5.6E-45 322.4 27.4 246 45-300 2-255 (267)
263 cd07834 STKc_MAPK Catalytic do 100.0 2.9E-41 6.2E-46 340.7 21.4 258 46-317 1-295 (330)
264 cd05094 PTKc_TrkC Catalytic do 100.0 1.2E-40 2.7E-45 330.3 25.5 250 42-302 2-274 (291)
265 cd05092 PTKc_TrkA Catalytic do 100.0 1E-40 2.2E-45 329.0 24.7 248 42-300 2-271 (280)
266 cd05148 PTKc_Srm_Brk Catalytic 100.0 5E-41 1.1E-45 326.8 22.0 243 44-300 5-251 (261)
267 cd08229 STKc_Nek7 Catalytic do 100.0 6.1E-41 1.3E-45 327.3 22.6 247 44-300 1-255 (267)
268 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-40 2.4E-45 338.7 25.3 256 45-317 5-306 (342)
269 cd07835 STKc_CDK1_like Catalyt 100.0 8.2E-41 1.8E-45 329.5 23.5 251 47-314 1-283 (283)
270 cd05116 PTKc_Syk Catalytic dom 100.0 1.5E-40 3.2E-45 323.5 24.9 240 52-300 2-245 (257)
271 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.6E-40 3.4E-45 323.4 25.0 249 43-310 2-253 (256)
272 cd05054 PTKc_VEGFR Catalytic d 100.0 4.6E-41 1E-45 341.0 22.1 252 44-310 6-328 (337)
273 cd05068 PTKc_Frk_like Catalyti 100.0 2.5E-40 5.4E-45 322.4 26.3 245 42-300 3-251 (261)
274 cd05089 PTKc_Tie1 Catalytic do 100.0 1.5E-40 3.3E-45 330.7 25.2 244 45-301 2-266 (297)
275 cd05108 PTKc_EGFR Catalytic do 100.0 1.4E-40 3E-45 334.1 25.1 254 42-311 4-264 (316)
276 cd05051 PTKc_DDR Catalytic dom 100.0 1.4E-40 3E-45 330.0 24.7 249 42-300 2-287 (296)
277 cd05035 PTKc_Axl_like Catalyti 100.0 1.6E-40 3.5E-45 324.9 24.7 250 47-310 1-267 (273)
278 cd07866 STKc_BUR1 Catalytic do 100.0 1.2E-40 2.6E-45 332.3 24.2 264 44-314 7-311 (311)
279 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.9E-41 2.2E-45 345.8 24.4 250 42-301 34-388 (400)
280 cd05075 PTKc_Axl Catalytic dom 100.0 1.3E-40 2.9E-45 325.9 24.0 245 47-300 1-261 (272)
281 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.8E-40 3.8E-45 331.8 25.4 249 43-301 16-290 (307)
282 cd05053 PTKc_FGFR Catalytic do 100.0 1.9E-40 4E-45 328.8 25.3 256 40-310 7-286 (293)
283 cd05055 PTKc_PDGFR Catalytic d 100.0 1.8E-40 4E-45 331.3 25.4 251 40-300 30-291 (302)
284 cd05122 PKc_STE Catalytic doma 100.0 5.3E-40 1.2E-44 315.8 27.6 249 46-313 1-253 (253)
285 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.5E-40 3.3E-45 323.7 24.0 243 43-300 4-250 (260)
286 cd05109 PTKc_HER2 Catalytic do 100.0 3.4E-40 7.4E-45 324.8 26.3 253 41-309 3-262 (279)
287 cd05071 PTKc_Src Catalytic dom 100.0 2.5E-40 5.4E-45 323.1 24.8 243 43-300 4-250 (262)
288 cd05082 PTKc_Csk Catalytic dom 100.0 2.7E-40 5.8E-45 321.2 24.8 239 42-300 3-246 (256)
289 cd06633 STKc_TAO3 Catalytic do 100.0 5.7E-40 1.2E-44 329.4 27.8 251 47-317 23-279 (313)
290 cd07879 STKc_p38delta_MAPK13 C 100.0 2.4E-40 5.2E-45 336.3 25.2 253 45-319 15-305 (342)
291 cd07838 STKc_CDK4_6_like Catal 100.0 3.8E-40 8.3E-45 324.7 25.9 250 47-314 1-287 (287)
292 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.7E-40 5.8E-45 336.4 25.5 252 44-316 16-305 (345)
293 cd05066 PTKc_EphR_A Catalytic 100.0 3.7E-40 8E-45 322.5 25.5 249 43-300 2-256 (267)
294 KOG4645 MAPKKK (MAP kinase kin 100.0 5.6E-43 1.2E-47 380.2 6.1 258 46-315 1236-1498(1509)
295 cd08226 PK_STRAD_beta Pseudoki 100.0 7.4E-41 1.6E-45 337.9 21.1 258 51-317 4-314 (328)
296 cd08530 STKc_CNK2-like Catalyt 100.0 3.5E-40 7.6E-45 319.2 24.9 251 46-314 1-256 (256)
297 PTZ00024 cyclin-dependent prot 100.0 2.4E-40 5.2E-45 334.9 24.5 267 45-317 8-319 (335)
298 cd05034 PTKc_Src_like Catalyti 100.0 4.5E-40 9.7E-45 320.1 25.4 245 42-300 3-251 (261)
299 cd05060 PTKc_Syk_like Catalyti 100.0 4.8E-40 1E-44 319.6 25.5 240 51-300 1-245 (257)
300 KOG0666 Cyclin C-dependent kin 100.0 4.5E-42 9.8E-47 324.7 10.8 260 44-317 23-343 (438)
301 cd05039 PTKc_Csk_like Catalyti 100.0 5.4E-40 1.2E-44 318.9 25.2 240 42-300 3-246 (256)
302 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.3E-40 1.4E-44 329.0 26.5 250 42-301 9-284 (314)
303 cd07840 STKc_CDK9_like Catalyt 100.0 3.8E-40 8.1E-45 324.4 24.1 252 47-314 1-287 (287)
304 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.8E-40 1.2E-44 319.6 25.1 243 43-300 4-250 (260)
305 cd06657 STKc_PAK4 Catalytic do 100.0 2.7E-40 5.8E-45 328.6 23.1 251 47-316 22-275 (292)
306 cd07851 STKc_p38 Catalytic dom 100.0 2.3E-40 4.9E-45 336.6 22.8 252 44-316 14-303 (343)
307 cd07864 STKc_CDK12 Catalytic d 100.0 4.7E-40 1E-44 327.1 24.2 256 43-314 5-302 (302)
308 cd05065 PTKc_EphR_B Catalytic 100.0 1E-39 2.2E-44 319.5 25.7 251 43-300 2-258 (269)
309 cd06634 STKc_TAO2 Catalytic do 100.0 6.7E-40 1.4E-44 328.1 24.8 252 45-316 15-272 (308)
310 cd05046 PTK_CCK4 Pseudokinase 100.0 6.9E-40 1.5E-44 321.5 24.4 252 43-310 3-271 (275)
311 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-39 2.7E-44 318.4 26.0 250 42-300 2-257 (268)
312 cd07857 STKc_MPK1 Catalytic do 100.0 1.1E-39 2.4E-44 329.8 26.5 258 46-316 1-297 (332)
313 cd05069 PTKc_Yes Catalytic dom 100.0 1E-39 2.2E-44 318.1 25.2 242 44-300 5-250 (260)
314 cd05101 PTKc_FGFR2 Catalytic d 100.0 9.1E-40 2E-44 326.1 25.4 251 40-300 10-286 (304)
315 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1E-39 2.2E-44 329.9 25.8 253 43-316 8-293 (328)
316 KOG0983 Mitogen-activated prot 100.0 6E-41 1.3E-45 312.3 15.3 259 40-317 87-355 (391)
317 cd05050 PTKc_Musk Catalytic do 100.0 9.6E-40 2.1E-44 323.1 24.9 248 43-300 3-279 (288)
318 cd08216 PK_STRAD Pseudokinase 100.0 4E-40 8.7E-45 329.8 22.2 258 52-318 5-302 (314)
319 cd08222 STKc_Nek11 Catalytic d 100.0 4.2E-40 9.1E-45 320.4 21.6 253 46-314 1-260 (260)
320 cd05118 STKc_CMGC Catalytic do 100.0 5.7E-40 1.2E-44 322.8 22.2 251 47-314 1-283 (283)
321 cd07829 STKc_CDK_like Catalyti 100.0 6.5E-40 1.4E-44 322.2 22.6 251 47-314 1-282 (282)
322 cd07852 STKc_MAPK15 Catalytic 100.0 7.3E-40 1.6E-44 331.8 23.6 262 43-317 5-301 (337)
323 cd05111 PTK_HER3 Pseudokinase 100.0 1.7E-39 3.7E-44 320.3 25.6 248 42-300 4-258 (279)
324 cd05097 PTKc_DDR_like Catalyti 100.0 9.8E-40 2.1E-44 324.5 24.0 248 43-300 3-286 (295)
325 cd05112 PTKc_Itk Catalytic dom 100.0 2E-39 4.4E-44 314.6 25.6 248 44-310 3-253 (256)
326 cd05040 PTKc_Ack_like Catalyti 100.0 1.6E-39 3.4E-44 315.6 24.5 240 51-300 1-248 (257)
327 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.4E-39 3.1E-44 329.3 25.0 259 38-311 5-289 (334)
328 cd05045 PTKc_RET Catalytic dom 100.0 1.5E-39 3.3E-44 322.1 24.6 246 46-301 1-277 (290)
329 cd05057 PTKc_EGFR_like Catalyt 100.0 3E-39 6.5E-44 318.1 26.5 249 42-301 4-259 (279)
330 cd05073 PTKc_Hck Catalytic dom 100.0 3.8E-39 8.2E-44 314.0 26.7 244 42-300 3-250 (260)
331 cd05095 PTKc_DDR2 Catalytic do 100.0 2.1E-39 4.6E-44 322.2 25.3 247 44-300 4-287 (296)
332 cd05041 PTKc_Fes_like Catalyti 100.0 2.7E-39 5.8E-44 312.9 24.9 244 51-310 1-247 (251)
333 cd05115 PTKc_Zap-70 Catalytic 100.0 2.6E-39 5.7E-44 315.1 24.9 240 52-301 2-246 (257)
334 KOG2345 Serine/threonine prote 100.0 2.3E-41 5E-46 311.4 9.8 261 41-310 17-295 (302)
335 KOG0671 LAMMER dual specificit 100.0 4.4E-41 9.5E-46 326.5 12.1 251 44-317 88-412 (415)
336 KOG0584 Serine/threonine prote 100.0 9.7E-41 2.1E-45 341.9 15.0 251 48-317 43-302 (632)
337 cd06618 PKc_MKK7 Catalytic dom 100.0 3.1E-39 6.8E-44 321.0 25.4 260 38-316 8-278 (296)
338 cd05056 PTKc_FAK Catalytic dom 100.0 3.8E-39 8.3E-44 315.6 25.5 246 43-300 4-255 (270)
339 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.2E-39 2.7E-44 337.6 23.2 254 42-310 34-394 (401)
340 cd05047 PTKc_Tie Catalytic dom 100.0 2.9E-39 6.4E-44 316.8 24.6 237 51-300 1-258 (270)
341 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.1E-39 2.5E-44 331.5 22.4 255 42-311 4-335 (343)
342 cd05043 PTK_Ryk Pseudokinase d 100.0 4.6E-39 9.9E-44 316.7 26.0 250 42-301 3-267 (280)
343 cd05085 PTKc_Fer Catalytic dom 100.0 5E-39 1.1E-43 310.8 25.7 238 51-300 1-241 (250)
344 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.6E-39 9.9E-44 317.4 25.8 246 45-300 3-271 (283)
345 smart00219 TyrKc Tyrosine kina 100.0 4.3E-39 9.4E-44 311.7 25.1 248 47-310 1-256 (258)
346 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6.2E-40 1.3E-44 319.4 19.2 237 51-310 1-255 (258)
347 KOG1035 eIF-2alpha kinase GCN2 100.0 2.5E-40 5.4E-45 358.2 16.7 262 44-315 478-875 (1351)
348 cd07830 STKc_MAK_like Catalyti 100.0 3.1E-39 6.6E-44 318.1 23.1 249 47-314 1-283 (283)
349 cd05083 PTKc_Chk Catalytic dom 100.0 4.9E-39 1.1E-43 312.0 23.9 237 43-300 4-244 (254)
350 cd05044 PTKc_c-ros Catalytic d 100.0 4.9E-39 1.1E-43 314.2 22.0 240 51-300 1-260 (269)
351 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.2E-38 2.7E-43 314.3 24.7 247 44-300 3-273 (284)
352 PF07714 Pkinase_Tyr: Protein 100.0 3.1E-39 6.6E-44 315.3 20.0 247 48-309 2-256 (259)
353 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 9.4E-39 2E-43 312.2 23.4 237 51-310 1-259 (262)
354 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 9.8E-39 2.1E-43 315.4 23.7 252 45-310 4-278 (284)
355 cd05110 PTKc_HER4 Catalytic do 100.0 1.5E-38 3.3E-43 317.4 24.6 248 42-300 4-258 (303)
356 cd05058 PTKc_Met_Ron Catalytic 100.0 1.9E-38 4.2E-43 308.8 24.5 242 51-300 1-249 (262)
357 KOG4721 Serine/threonine prote 100.0 4.1E-40 8.9E-45 331.6 12.9 236 48-311 127-364 (904)
358 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 9.8E-39 2.1E-43 314.3 21.7 236 52-310 2-271 (274)
359 cd05042 PTKc_Aatyk Catalytic d 100.0 3.1E-38 6.7E-43 309.0 24.5 239 51-300 1-260 (269)
360 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.2E-38 4.8E-43 310.3 23.3 245 47-300 1-262 (273)
361 KOG0194 Protein tyrosine kinas 100.0 6.2E-39 1.3E-43 329.3 19.7 250 42-301 154-411 (474)
362 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.5E-38 9.7E-43 308.0 25.0 239 51-300 1-260 (269)
363 PHA02882 putative serine/threo 100.0 5.5E-38 1.2E-42 312.3 25.9 260 40-309 7-290 (294)
364 KOG0669 Cyclin T-dependent kin 100.0 5.1E-41 1.1E-45 309.5 3.7 259 44-315 16-319 (376)
365 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.9E-38 4.1E-43 307.9 21.9 230 51-300 1-251 (259)
366 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.2E-38 7E-43 310.5 23.3 249 43-300 2-273 (284)
367 cd08528 STKc_Nek10 Catalytic d 100.0 8.1E-38 1.8E-42 305.8 23.9 244 46-300 1-260 (269)
368 KOG1151 Tousled-like protein k 100.0 1.5E-39 3.2E-44 319.5 10.2 265 43-315 461-745 (775)
369 cd05086 PTKc_Aatyk2 Catalytic 100.0 2E-37 4.3E-42 303.6 24.5 239 51-300 1-259 (268)
370 KOG0668 Casein kinase II, alph 100.0 5.9E-39 1.3E-43 292.1 11.7 250 43-317 36-328 (338)
371 PLN03225 Serine/threonine-prot 100.0 1.5E-37 3.3E-42 334.0 24.4 259 40-321 127-460 (566)
372 KOG0193 Serine/threonine prote 100.0 1.9E-38 4.1E-43 323.2 14.4 245 43-300 390-643 (678)
373 KOG0670 U4/U6-associated splic 100.0 7.6E-39 1.7E-43 319.9 10.3 252 43-316 430-751 (752)
374 KOG4250 TANK binding protein k 100.0 2.9E-38 6.3E-43 327.3 14.9 242 45-299 13-297 (732)
375 KOG1187 Serine/threonine prote 100.0 4.2E-37 9E-42 312.7 21.7 244 45-302 75-344 (361)
376 KOG0587 Traf2- and Nck-interac 100.0 5.3E-37 1.2E-41 323.4 20.9 254 44-316 18-287 (953)
377 KOG1026 Nerve growth factor re 100.0 2.4E-37 5.3E-42 327.4 17.7 252 40-301 481-753 (774)
378 KOG0665 Jun-N-terminal kinase 100.0 1.8E-37 3.9E-42 295.1 13.0 253 44-319 16-316 (369)
379 smart00220 S_TKc Serine/Threon 100.0 6.3E-36 1.4E-40 285.2 23.4 240 57-314 1-244 (244)
380 KOG1095 Protein tyrosine kinas 100.0 2.6E-36 5.5E-41 330.1 23.0 254 42-310 689-956 (1025)
381 PLN03224 probable serine/threo 100.0 3E-35 6.5E-40 309.6 25.8 263 40-316 140-505 (507)
382 PF14593 PH_3: PH domain; PDB: 100.0 2.7E-36 5.9E-41 247.8 11.8 100 386-488 1-100 (104)
383 KOG1006 Mitogen-activated prot 100.0 2.1E-37 4.5E-42 287.7 5.4 258 40-316 59-332 (361)
384 KOG1027 Serine/threonine prote 100.0 1E-36 2.2E-41 320.0 11.0 245 47-314 511-770 (903)
385 KOG0664 Nemo-like MAPK-related 100.0 4.4E-37 9.5E-42 286.2 4.9 260 44-319 52-351 (449)
386 KOG1290 Serine/threonine prote 100.0 6.9E-35 1.5E-39 290.3 19.9 134 41-179 74-222 (590)
387 KOG1152 Signal transduction se 100.0 1.1E-35 2.4E-40 300.7 12.1 218 28-257 544-771 (772)
388 KOG4257 Focal adhesion tyrosin 100.0 2.6E-35 5.7E-40 299.7 14.7 269 46-326 390-679 (974)
389 KOG1094 Discoidin domain recep 100.0 3.9E-34 8.5E-39 289.6 18.0 250 40-300 533-794 (807)
390 KOG0199 ACK and related non-re 100.0 4E-34 8.7E-39 294.3 15.9 247 44-300 109-362 (1039)
391 PLN00113 leucine-rich repeat r 100.0 6.5E-34 1.4E-38 326.5 19.0 230 46-300 691-941 (968)
392 cd01262 PH_PDK1 3-Phosphoinosi 100.0 8.5E-34 1.9E-38 222.3 10.7 89 398-488 1-89 (89)
393 KOG0603 Ribosomal protein S6 k 100.0 4.2E-35 9E-40 301.7 4.3 260 52-332 1-265 (612)
394 KOG1167 Serine/threonine prote 100.0 8.3E-34 1.8E-38 279.3 12.6 265 41-318 32-388 (418)
395 KOG4278 Protein tyrosine kinas 100.0 3.6E-33 7.8E-38 283.7 17.1 244 45-301 267-514 (1157)
396 KOG0576 Mitogen-activated prot 100.0 1.5E-34 3.3E-39 296.7 7.0 255 44-316 14-276 (829)
397 KOG0196 Tyrosine kinase, EPH ( 100.0 1.2E-33 2.6E-38 294.3 12.4 254 37-301 621-882 (996)
398 KOG0984 Mitogen-activated prot 100.0 1.3E-32 2.8E-37 247.4 12.9 213 43-270 44-268 (282)
399 smart00221 STYKc Protein kinas 100.0 1.5E-30 3.3E-35 246.0 22.9 216 47-273 1-220 (225)
400 cd00180 PKc Catalytic domain o 100.0 1.8E-30 3.9E-35 241.1 22.3 212 53-312 1-215 (215)
401 KOG3653 Transforming growth fa 100.0 8.7E-32 1.9E-36 267.7 13.4 241 44-301 209-494 (534)
402 KOG0200 Fibroblast/platelet-de 100.0 1.7E-30 3.7E-35 282.0 23.1 244 46-300 297-569 (609)
403 KOG1345 Serine/threonine kinas 100.0 4.3E-31 9.3E-36 246.3 9.1 236 44-297 23-275 (378)
404 KOG2052 Activin A type IB rece 100.0 6E-30 1.3E-34 252.9 16.4 242 44-300 210-493 (513)
405 KOG1025 Epidermal growth facto 100.0 4.1E-30 8.9E-35 268.8 14.4 246 46-302 697-949 (1177)
406 PLN00181 protein SPA1-RELATED; 100.0 1.6E-30 3.4E-35 292.0 10.4 205 102-316 29-270 (793)
407 KOG0606 Microtubule-associated 100.0 4.6E-30 9.9E-35 276.0 11.4 243 43-327 81-331 (1205)
408 COG0515 SPS1 Serine/threonine 100.0 1.3E-26 2.8E-31 228.1 26.0 257 47-315 2-279 (384)
409 smart00750 KIND kinase non-cat 99.9 5E-28 1.1E-32 221.7 11.4 158 130-315 1-169 (176)
410 KOG0590 Checkpoint kinase and 99.9 4.8E-29 1E-33 267.9 3.8 261 48-320 321-594 (601)
411 KOG1164 Casein kinase (serine/ 99.9 1.1E-25 2.3E-30 227.0 24.1 249 46-300 19-287 (322)
412 PRK09188 serine/threonine prot 99.9 1.8E-26 3.8E-31 233.7 18.1 189 38-239 11-210 (365)
413 KOG1163 Casein kinase (serine/ 99.9 2E-26 4.4E-31 211.9 15.4 252 40-300 10-274 (341)
414 KOG1024 Receptor-like protein 99.9 1.4E-26 3.1E-31 225.5 14.8 250 42-301 281-546 (563)
415 KOG1165 Casein kinase (serine/ 99.9 2.3E-25 5E-30 213.4 18.9 247 45-300 28-289 (449)
416 KOG4158 BRPK/PTEN-induced prot 99.9 2.4E-25 5.2E-30 217.5 9.3 268 40-315 152-517 (598)
417 PF14531 Kinase-like: Kinase-l 99.9 3.6E-24 7.8E-29 208.5 14.3 234 46-297 13-288 (288)
418 cd05147 RIO1_euk RIO kinase fa 99.9 4.8E-24 1E-28 198.5 13.0 142 50-195 2-167 (190)
419 PRK10359 lipopolysaccharide co 99.9 1E-23 2.3E-28 199.5 12.8 176 41-249 27-216 (232)
420 cd05145 RIO1_like RIO kinase f 99.9 3.6E-23 7.9E-28 192.8 15.0 144 49-196 1-168 (190)
421 KOG0606 Microtubule-associated 99.9 1.1E-23 2.4E-28 227.1 7.0 287 41-329 800-1110(1205)
422 KOG1240 Protein kinase contain 99.9 1.5E-23 3.2E-28 226.3 6.9 234 46-301 24-286 (1431)
423 PRK12274 serine/threonine prot 99.9 5.4E-22 1.2E-26 184.3 14.3 201 47-260 4-212 (218)
424 PRK10345 hypothetical protein; 99.9 6.1E-21 1.3E-25 179.7 15.0 136 48-192 5-156 (210)
425 KOG1166 Mitotic checkpoint ser 99.8 3.7E-21 8.1E-26 211.4 12.2 225 41-291 694-934 (974)
426 smart00090 RIO RIO-like kinase 99.8 1.3E-20 2.8E-25 181.4 11.7 145 46-195 29-198 (237)
427 KOG1033 eIF-2alpha kinase PEK/ 99.8 7.5E-22 1.6E-26 200.5 3.2 170 119-300 330-506 (516)
428 KOG0590 Checkpoint kinase and 99.8 1.8E-21 3.8E-26 209.6 0.4 260 44-316 19-291 (601)
429 PRK14879 serine/threonine prot 99.8 8.3E-19 1.8E-23 165.6 16.6 138 50-194 1-143 (211)
430 KOG0195 Integrin-linked kinase 99.8 1.5E-19 3.3E-24 169.2 7.3 240 42-301 187-437 (448)
431 cd05144 RIO2_C RIO kinase fami 99.8 1.3E-18 2.9E-23 163.0 11.4 141 47-198 17-178 (198)
432 TIGR03724 arch_bud32 Kae1-asso 99.8 2.1E-18 4.6E-23 161.4 12.4 133 52-194 1-138 (199)
433 cd05119 RIO RIO kinase family, 99.8 2.8E-18 6.2E-23 158.8 10.7 141 49-197 1-166 (187)
434 PRK09605 bifunctional UGMP fam 99.7 1E-17 2.2E-22 180.3 14.3 139 45-194 333-476 (535)
435 PRK01723 3-deoxy-D-manno-octul 99.7 2.2E-16 4.8E-21 152.2 14.3 138 50-194 36-191 (239)
436 cd01251 PH_centaurin_alpha Cen 99.7 1.2E-16 2.5E-21 133.4 7.4 89 400-488 1-101 (103)
437 cd05120 APH_ChoK_like Aminogly 99.7 5.2E-16 1.1E-20 136.9 11.5 132 49-194 2-138 (155)
438 KOG1023 Natriuretic peptide re 99.6 1.5E-15 3.2E-20 157.4 13.6 196 99-302 1-216 (484)
439 KOG0601 Cyclin-dependent kinas 99.6 4E-16 8.7E-21 161.7 6.2 263 42-318 111-386 (524)
440 PRK04750 ubiB putative ubiquin 99.6 1.1E-16 2.3E-21 169.6 1.5 188 2-198 73-317 (537)
441 cd01264 PH_melted Melted pleck 99.6 9.6E-16 2.1E-20 125.7 6.8 88 400-487 2-101 (101)
442 cd01233 Unc104 Unc-104 pleckst 99.6 5.1E-15 1.1E-19 122.9 7.4 86 398-487 2-98 (100)
443 KOG1243 Protein kinase [Genera 99.5 7.4E-14 1.6E-18 146.3 15.6 229 54-316 21-251 (690)
444 cd01265 PH_PARIS-1 PARIS-1 ple 99.5 2.1E-14 4.6E-19 117.9 7.0 85 401-487 2-94 (95)
445 TIGR01982 UbiB 2-polyprenylphe 99.5 8.2E-14 1.8E-18 145.8 13.0 142 50-197 122-309 (437)
446 cd01238 PH_Tec Tec pleckstrin 99.5 4.7E-14 1E-18 118.3 7.4 85 399-486 1-106 (106)
447 cd01257 PH_IRS Insulin recepto 99.5 9.1E-14 2E-18 114.7 8.4 87 398-486 2-101 (101)
448 cd01247 PH_GPBP Goodpasture an 99.5 7.2E-14 1.6E-18 113.7 7.5 83 401-485 2-90 (91)
449 cd05146 RIO3_euk RIO kinase fa 99.5 5.4E-13 1.2E-17 123.8 13.6 142 50-196 2-175 (197)
450 cd01236 PH_outspread Outspread 99.5 7.6E-14 1.7E-18 115.6 6.4 86 400-485 1-102 (104)
451 KOG0601 Cyclin-dependent kinas 99.5 3.4E-14 7.5E-19 147.4 5.4 251 42-314 262-517 (524)
452 cd01235 PH_SETbf Set binding f 99.4 3.2E-13 7E-18 112.3 8.5 84 401-487 2-101 (101)
453 cd05151 ChoK Choline Kinase (C 99.4 4.6E-13 9.9E-18 121.6 9.4 127 50-193 3-135 (170)
454 cd01266 PH_Gab Gab (Grb2-assoc 99.4 3.3E-13 7.2E-18 113.7 7.7 83 401-486 2-107 (108)
455 cd01260 PH_CNK Connector enhan 99.4 2.3E-13 4.9E-18 112.2 6.3 86 400-485 2-95 (96)
456 cd01241 PH_Akt Akt pleckstrin 99.4 5.5E-13 1.2E-17 111.1 6.7 89 398-487 1-102 (102)
457 KOG1266 Protein kinase [Signal 99.4 6.8E-14 1.5E-18 134.9 -0.4 270 33-320 55-340 (458)
458 cd01244 PH_RasGAP_CG9209 RAS_G 99.4 1.4E-12 3E-17 107.1 6.9 87 399-486 8-98 (98)
459 KOG2137 Protein kinase [Signal 99.3 9.2E-13 2E-17 138.6 5.3 166 152-323 106-277 (700)
460 cd01252 PH_cytohesin Cytohesin 99.3 5.3E-12 1.2E-16 109.3 7.2 87 400-488 2-114 (125)
461 cd01245 PH_RasGAP_CG5898 RAS G 99.3 1.1E-11 2.3E-16 101.5 6.7 85 400-485 1-97 (98)
462 COG3642 Mn2+-dependent serine/ 99.2 4.6E-11 1E-15 107.8 10.8 134 51-194 2-140 (204)
463 cd01246 PH_oxysterol_bp Oxyste 99.2 5.1E-11 1.1E-15 96.8 7.6 85 400-486 1-91 (91)
464 cd01254 PH_PLD Phospholipase D 99.2 5.3E-11 1.1E-15 102.2 7.9 72 412-486 33-121 (121)
465 cd05154 ACAD10_11_like Acyl-Co 99.2 1.1E-10 2.3E-15 110.5 10.7 140 51-194 4-206 (223)
466 KOG3087 Serine/threonine prote 99.2 3E-10 6.6E-15 102.1 12.0 144 49-194 11-165 (229)
467 cd01250 PH_centaurin Centaurin 99.1 1.8E-10 3.9E-15 94.1 5.7 84 400-485 1-93 (94)
468 KOG3741 Poly(A) ribonuclease s 99.1 2.9E-09 6.4E-14 109.0 15.1 202 58-296 289-512 (655)
469 PRK15123 lipopolysaccharide co 99.0 7.1E-09 1.5E-13 101.4 16.0 134 58-193 35-193 (268)
470 PF01163 RIO1: RIO1 family; I 99.0 3.4E-09 7.5E-14 98.0 11.2 129 60-196 1-157 (188)
471 PF15409 PH_8: Pleckstrin homo 99.0 2.2E-09 4.7E-14 85.7 8.2 82 402-486 1-88 (89)
472 PF00169 PH: PH domain; Inter 98.9 5.4E-09 1.2E-13 86.1 8.8 86 398-487 1-103 (104)
473 cd01219 PH_FGD FGD (faciogenit 98.9 7E-09 1.5E-13 86.2 8.9 87 398-488 2-100 (101)
474 COG0478 RIO-like serine/threon 98.9 2.4E-08 5.1E-13 95.6 11.7 138 47-194 93-251 (304)
475 PF06293 Kdo: Lipopolysacchari 98.8 3.9E-08 8.5E-13 92.7 12.8 126 69-194 31-170 (206)
476 KOG0930 Guanine nucleotide exc 98.8 7.7E-09 1.7E-13 97.2 7.1 96 387-488 253-376 (395)
477 COG4248 Uncharacterized protei 98.8 9.7E-08 2.1E-12 95.8 12.7 233 48-302 14-292 (637)
478 cd01263 PH_anillin Anillin Ple 98.7 3.8E-08 8.2E-13 83.9 5.9 74 412-486 19-122 (122)
479 PRK09902 hypothetical protein; 98.7 3.4E-07 7.4E-12 85.6 12.6 137 54-193 27-178 (216)
480 cd01220 PH_CDEP Chondrocyte-de 98.6 2.1E-07 4.6E-12 76.8 9.7 87 398-488 2-98 (99)
481 PF15413 PH_11: Pleckstrin hom 98.6 4.9E-08 1.1E-12 82.6 5.9 87 400-486 1-112 (112)
482 cd01237 Unc112 Unc-112 pleckst 98.6 4.7E-08 1E-12 80.3 5.5 74 412-485 20-101 (106)
483 PF06176 WaaY: Lipopolysacchar 98.6 4.3E-07 9.3E-12 85.2 12.1 142 41-193 27-182 (229)
484 KOG1035 eIF-2alpha kinase GCN2 98.6 7E-07 1.5E-11 99.6 13.4 203 89-316 226-439 (1351)
485 COG0661 AarF Predicted unusual 98.5 1.8E-07 3.8E-12 99.2 8.3 142 51-197 131-317 (517)
486 KOG0576 Mitogen-activated prot 98.5 9E-09 2E-13 107.8 -3.0 242 44-318 241-491 (829)
487 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 2E-06 4.4E-11 82.3 12.9 133 51-193 7-181 (226)
488 COG1718 RIO1 Serine/threonine 98.4 2.7E-06 5.8E-11 80.8 12.0 140 50-196 53-217 (268)
489 KOG1090 Predicted dual-specifi 98.4 1.1E-07 2.3E-12 102.5 1.6 101 387-487 1622-1731(1732)
490 smart00233 PH Pleckstrin homol 98.4 1E-06 2.2E-11 71.4 6.8 87 399-487 2-101 (102)
491 PF01636 APH: Phosphotransfera 98.3 9E-06 2E-10 77.1 13.9 137 50-193 2-196 (239)
492 cd01253 PH_beta_spectrin Beta- 98.3 1.9E-06 4.1E-11 71.9 7.9 76 410-485 21-103 (104)
493 PF13095 FTA2: Kinetochore Sim 98.2 4.5E-05 9.7E-10 70.9 14.9 128 45-192 37-206 (207)
494 cd05150 APH Aminoglycoside 3'- 98.2 1.8E-05 4E-10 76.3 11.6 134 52-193 5-192 (244)
495 KOG1235 Predicted unusual prot 98.1 1.4E-05 3.1E-10 84.6 11.0 140 50-197 166-357 (538)
496 COG2112 Predicted Ser/Thr prot 98.1 2E-05 4.4E-10 71.1 9.6 129 48-194 25-155 (201)
497 cd01218 PH_phafin2 Phafin2 Pl 98.1 2.8E-05 6.1E-10 64.5 9.6 88 395-487 1-98 (104)
498 cd00821 PH Pleckstrin homology 98.1 9.8E-06 2.1E-10 64.8 6.8 83 401-485 2-95 (96)
499 cd01256 PH_dynamin Dynamin ple 98.1 1.9E-05 4.2E-10 63.1 7.9 84 398-485 1-103 (110)
500 KOG1826 Ras GTPase activating 98.0 2.9E-07 6.2E-12 104.4 -4.0 250 43-315 1227-1496(2724)
No 1
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-105 Score=799.11 Aligned_cols=439 Identities=48% Similarity=0.779 Sum_probs=386.5
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCC
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTF 118 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 118 (489)
++++..||.|++.||+|+|++|++|++++++++||||++.|+++.++.++.++.+|+++|.+| +||+|++||.+|+|+.
T Consensus 68 ~kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~ 147 (604)
T KOG0592|consen 68 EKKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE 147 (604)
T ss_pred ccCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc
Confidence 388999999999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.+|||+||+++|+|+++|++.|.|++.++++|++||+.||+|||++|||||||||||||||.|||++|+|||.|+.+.+.
T Consensus 148 sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999775
Q ss_pred ccccc---CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCC
Q 011287 199 RITVL---PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFP 275 (489)
Q Consensus 199 ~~~~~---~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p 275 (489)
..... .......+..+||||+.|++||+|.+...++.+||||||||||||++|.+||++.+++.+|++|+..++.||
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp 307 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP 307 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC
Confidence 43311 111122334689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCC
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQTPPKLASEPMVQSGEGDDVHDSSWNPSHIG 355 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (489)
+++++.++|||+++|..||++|+|+ .+|++||||.+++|++++.++||++.++.+..+...++.....|.....+
T Consensus 308 ~~fp~~a~dLv~KLLv~dp~~Rlt~-----~qIk~HpFF~~Vdw~nlw~~~PP~l~py~p~~~~s~e~~s~~~~~~~~~~ 382 (604)
T KOG0592|consen 308 EGFPEDARDLIKKLLVRDPSDRLTS-----QQIKAHPFFEGVDWENLWQQTPPKLQPYKPATSISPEYYSAYTPLEPGLD 382 (604)
T ss_pred CCCCHHHHHHHHHHHccCccccccH-----HHHhhCcccccCChhhhhhcCCCcccCCCCcccCCcccCcccccccCCcc
Confidence 9999999999999999999999999 88999999999999999999999999998877665554433322111111
Q ss_pred C-------------------------ccccccCCCCCCCCCCCcccccccc--cccCcccccccCCCceEEEEEeeehhh
Q 011287 356 D-------------------------ISAKINDGNGGASSSEGSITRLASI--DSFDSKWQQFLDPGESVLMISMVKKLQ 408 (489)
Q Consensus 356 ~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~g~~~k~~ 408 (489)
. ..++...+++.++.......|+.++ ++.++.||+|++ |++|+++|.|.|++
T Consensus 383 ~~~~~~~~~~~S~s~~~psn~~~~~~~~~~~~~~~~~~s~~~~~~~R~q~le~~~~~~~w~~f~~-~~~i~k~~~l~k~~ 461 (604)
T KOG0592|consen 383 ERALFQVPSSASQSSALPSNVTHNGDKVAQPVAPSASSSESKNDTARLQSLESQSKDNPWHQFLE-GSLILKEGALEKRQ 461 (604)
T ss_pred ccccccccccccccccCCCcccccccchhhccccccccccCcchhhhhhhccccccCccHHHhhh-hhhHHhHHHHHhhh
Confidence 1 0011001111111111122334333 447889999998 99999999999999
Q ss_pred hhhccceeEEEecCCeEEEECCCCCeeeeeeeccCCCCceEEEEcCCCcEEEEcCCceEEEEcCCccHHHHHHHHHHhc
Q 011287 409 KLTSKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQVSSPSHFKIVTPKKVLSFEDAKQRASQWKKAIEALQ 487 (489)
Q Consensus 409 g~~~k~r~~~lt~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~~~~~~~f~i~~p~r~y~~~d~~~~~~~W~~~i~~~~ 487 (489)
|+|.|||+|+||++||++|+||.++++||||||+++ +.++.+++++|+|+||+|+|++.|+++.|..||++|+++.
T Consensus 462 ~lf~rkr~lllTn~~rll~~~~~~~~lk~eip~~~~---~~~e~~n~~~~~i~TP~k~~~l~d~~~~as~w~~ai~~~~ 537 (604)
T KOG0592|consen 462 GLFARKRMLLLTNGPRLLYVDPQNLVLKGEIPWSPD---LRVELKNSSTFFIHTPNKVYYLEDPEQRASVWCKAIETVR 537 (604)
T ss_pred hhhhceeEEEecCCCeEEEEecccceeccccccCcc---cceeeccCcceEEECCccceeccCcccchhHHHHhhhhhh
Confidence 999999999999999999999999999999999996 9999999999999999999999999999999999999874
No 2
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-68 Score=515.22 Aligned_cols=284 Identities=42% Similarity=0.758 Sum_probs=263.4
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
+...++||+++++||+|+||+||.++.++|++.||+|+++|..+.+......+..|+.+|..++||+||+++..||+...
T Consensus 20 ~~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~k 99 (357)
T KOG0598|consen 20 EMVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEK 99 (357)
T ss_pred ccCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCe
Confidence 35778999999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+|+|+||+.||+|+.+|++++.|+|..+++|+++|+.||.|||++|||||||||||||+|.+||++|+|||+++....
T Consensus 100 LylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~-- 177 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK-- 177 (357)
T ss_pred EEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhccc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999985422
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC-CCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR-FPNYF 278 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~-~p~~~ 278 (489)
......++|||+.|||||++.+.+|+.++|+||||+++|+|++|.+||.+.+...++++|..+... .|..+
T Consensus 178 --------~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~l 249 (357)
T KOG0598|consen 178 --------DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYL 249 (357)
T ss_pred --------CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccC
Confidence 235667899999999999999999999999999999999999999999999999999999999954 45559
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC-CCCCCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG-QTPPKLASEP 334 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~-~~~p~~~~~~ 334 (489)
+.++++||+++|..||++|++ ...+.+++++||||.+++|+.+.. ...|++.|..
T Consensus 250 s~~ardll~~LL~rdp~~RLg-~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~ 305 (357)
T KOG0598|consen 250 SEEARDLLKKLLKRDPRQRLG-GPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNV 305 (357)
T ss_pred CHHHHHHHHHHhccCHHHhcC-CCCChHHhhcCcccccCCHHHHHhcCCCCCeecCC
Confidence 999999999999999999998 345789999999999999999865 4556555443
No 3
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-67 Score=493.19 Aligned_cols=273 Identities=42% Similarity=0.763 Sum_probs=263.6
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
...+++||++++.||.|+||.|.+++++.+|..||+|++++..+.+....+.+.+|+.+|+.+.||++++++++|.|...
T Consensus 39 ~~~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ 118 (355)
T KOG0616|consen 39 NPYSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSN 118 (355)
T ss_pred CCcchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCe
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+|+||||.+||+|+.++++.++|++..+++|++||+.||+|||+++|++|||||||||||.+|++||+|||+|+...
T Consensus 119 lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred EEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999753
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~ 279 (489)
.+..+.||||.|+|||++..++|+.++|+|||||++|||++|.+||.+.++..++++|+.+++.||..++
T Consensus 196 ----------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs 265 (355)
T KOG0616|consen 196 ----------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFS 265 (355)
T ss_pred ----------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccC
Confidence 3466889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
++++|||.++|+.|-.+|.+.-..|..+|++||||++++|..+..+
T Consensus 266 ~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r 311 (355)
T KOG0616|consen 266 SDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQR 311 (355)
T ss_pred HHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhc
Confidence 9999999999999999999887778999999999999999998664
No 4
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.9e-65 Score=511.87 Aligned_cols=294 Identities=41% Similarity=0.722 Sum_probs=264.9
Q ss_pred cccccCCCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEE
Q 011287 32 SFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLF 111 (489)
Q Consensus 32 s~~~~~~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~ 111 (489)
+..++..+.+++.+||+++++||+|+||.||+|+.+.||..||+|+++|....+.+.+..+..|+.+|...++|+||+||
T Consensus 128 te~lR~~R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLy 207 (550)
T KOG0605|consen 128 TEYLRLRRTRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLY 207 (550)
T ss_pred HHHHHhccccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEE
Confidence 34566777789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccC
Q 011287 112 FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGS 191 (489)
Q Consensus 112 ~~~~~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~ 191 (489)
..|+|..++|+||||++|||+..+|.+.+.|++..+++|+++++.|++.||++|+|||||||+|+|||.+||+||+|||+
T Consensus 208 YsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGL 287 (550)
T KOG0605|consen 208 YSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGL 287 (550)
T ss_pred EEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccccc---------------cCCCC----------------------CCCCccceecCCcCCChhhhcCCCCCC
Q 011287 192 VKPMQDSRITV---------------LPNAA----------------------SDDKACTFVGTAAYVPPEVLNSSPATF 234 (489)
Q Consensus 192 a~~~~~~~~~~---------------~~~~~----------------------~~~~~~~~~gt~~Y~aPE~l~~~~~~~ 234 (489)
+.-+....... .+... ......+.+|||.|+|||++.+..|+.
T Consensus 288 s~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~ 367 (550)
T KOG0605|consen 288 STGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGK 367 (550)
T ss_pred cchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCc
Confidence 86543211000 00000 011235689999999999999999999
Q ss_pred CCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--CCCCC--CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 235 GNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD--IRFPN--YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 235 ~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~--~~~p~--~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
.+|+||||||+||||.|.+||.+.++.+++++|.... +.||. .++++++|||.+||+ ||++|+++ .|++||+.
T Consensus 368 ~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~--~G~~EIK~ 444 (550)
T KOG0605|consen 368 ECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGS--KGAEEIKK 444 (550)
T ss_pred cccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCc--ccHHHHhc
Confidence 9999999999999999999999999999999999865 67776 478999999999999 99999995 58999999
Q ss_pred CCCCCCCCcccccCCCCC
Q 011287 311 HPFFKGIDWKNIRGQTPP 328 (489)
Q Consensus 311 hpff~~i~~~~~~~~~~p 328 (489)
||||++++|+.++...||
T Consensus 445 HPfF~~v~W~~l~~~~ap 462 (550)
T KOG0605|consen 445 HPFFKGVDWDHLREMPAP 462 (550)
T ss_pred CCccccCCcchhhcCCCC
Confidence 999999999999976644
No 5
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-63 Score=507.97 Aligned_cols=284 Identities=36% Similarity=0.650 Sum_probs=266.1
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCC
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTF 118 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~ 118 (489)
.++++++|.++++||+|+||+|++|..+.+++.||||+++|..+...+.++.+..|+.|+.... ||+++.|++.|+.+.
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 3889999999999999999999999999999999999999999999999999999999998885 999999999999999
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
++|+||||+.||++ .++++.+.|++..+++|+++++.||.|||++||||||||.+|||+|.+||+||+|||+++...
T Consensus 443 ~l~fvmey~~Ggdm-~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m-- 519 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDL-MHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM-- 519 (694)
T ss_pred eEEEEEEecCCCcE-EEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC--
Confidence 99999999999994 445556789999999999999999999999999999999999999999999999999998532
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~ 278 (489)
....++++|||||.|+|||+|.+..|+.++|+|||||+|||||.|..||.+.++.+++..|+..++.+|..+
T Consensus 520 --------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~l 591 (694)
T KOG0694|consen 520 --------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL 591 (694)
T ss_pred --------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcc
Confidence 345688899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC-CCCCCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG-QTPPKLASEP 334 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~-~~~p~~~~~~ 334 (489)
+.++.++++++|.+||++|+++.+.+..+|+.||||+.|+|+.|.. +..|++.|..
T Consensus 592 s~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i 648 (694)
T KOG0694|consen 592 SKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTI 648 (694)
T ss_pred cHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCccc
Confidence 9999999999999999999999998999999999999999999865 4566555543
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-60 Score=486.87 Aligned_cols=260 Identities=35% Similarity=0.695 Sum_probs=249.9
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
.+|..++.||+|||+.||.+++.++|..||+|++.|..+.+....+.+.+|+++.+.|+|||||++|.+|+|.+++|+|+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
|+|..++|..++++.+.++|.++++|+.||+.||.|||+++|+|||||..|+|++++++|||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~------ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD------ 171 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARD 284 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 284 (489)
.++..++||||.|.|||++....++..+||||+|||+|.||.|+|||+..+-.+++.+|...++.+|..++.+|++
T Consensus 172 ----~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~d 247 (592)
T KOG0575|consen 172 ----GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKD 247 (592)
T ss_pred ----ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHH
Confidence 3677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCC-CCCCc
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFF-KGIDW 319 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff-~~i~~ 319 (489)
||.+||++||.+||++ .+++.|+|| ++.--
T Consensus 248 LI~~lL~~~P~~Rpsl-----~~vL~h~Ff~~g~~p 278 (592)
T KOG0575|consen 248 LIRKLLRPNPSERPSL-----DEVLDHPFFKSGFTP 278 (592)
T ss_pred HHHHHhcCCcccCCCH-----HHHhcCHhhhCCCcC
Confidence 9999999999999999 899999999 55443
No 7
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.1e-61 Score=467.81 Aligned_cols=293 Identities=36% Similarity=0.625 Sum_probs=264.6
Q ss_pred CCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 38 ~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
+...+.+++|++++.||.|.-|+||+|+.+.++..+|+|+|+|..+...++...+..|.+||+.++||++..||..|+.+
T Consensus 70 ~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~ 149 (459)
T KOG0610|consen 70 KDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD 149 (459)
T ss_pred CCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc
Confidence 44678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCcccc
Q 011287 118 FSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPM 195 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~ 195 (489)
...|+|||||+||+|..+++++ +.|+++.+++|+++++.||+|||-.|||+||||||||||.++|||.|+||.++...
T Consensus 150 ~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred ceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 9999999999999999999876 56999999999999999999999999999999999999999999999999987654
Q ss_pred CCcccc-----------------------------c-c----------------CCCCCCCCccceecCCcCCChhhhcC
Q 011287 196 QDSRIT-----------------------------V-L----------------PNAASDDKACTFVGTAAYVPPEVLNS 229 (489)
Q Consensus 196 ~~~~~~-----------------------------~-~----------------~~~~~~~~~~~~~gt~~Y~aPE~l~~ 229 (489)
.....- . . ..+....+.++||||-+|+|||++.+
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 211000 0 0 00223456778999999999999999
Q ss_pred CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHhhccCCCCCCCCCCCCHHH
Q 011287 230 SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN--YFSDAARDLIDRLLDVDPSGRPGAGPGGYAV 307 (489)
Q Consensus 230 ~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~ 307 (489)
...+.++|+|+||+.+||||.|..||.|.+..+++.+|+...+.||. .++.+++|||+++|.+||++|++.. .|.++
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~-rGA~e 388 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSK-RGAAE 388 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccc-cchHH
Confidence 99999999999999999999999999999999999999999999997 4689999999999999999999964 46799
Q ss_pred HhcCCCCCCCCcccccCCCCCCCC
Q 011287 308 LKMHPFFKGIDWKNIRGQTPPKLA 331 (489)
Q Consensus 308 l~~hpff~~i~~~~~~~~~~p~~~ 331 (489)
|++||||+|++|.-++...||.++
T Consensus 389 IK~HpFF~gVnWaLir~~~PP~iP 412 (459)
T KOG0610|consen 389 IKRHPFFEGVNWALIRCARPPEIP 412 (459)
T ss_pred hhcCccccCCChhheeccCCCcCC
Confidence 999999999999977777777653
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-60 Score=464.33 Aligned_cols=261 Identities=38% Similarity=0.577 Sum_probs=236.0
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccc----hhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK----ENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF 118 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 118 (489)
..+-|.+.+.||.|+||.|-+|.++.||+.||||++.+..... ......+.+|+++|++|+|||||+++++|....
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4577999999999999999999999999999999999877665 335566889999999999999999999999999
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC---CCEEEeeccCcccc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD---GHIKIADFGSVKPM 195 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~---g~ikL~DFG~a~~~ 195 (489)
..|+||||++||+|++.+-.++.+.+...+.+++|++.||.|||++||+||||||+|||++.+ ..+||+|||+|+..
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~ 329 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS 329 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999877 68999999999976
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcCCC---CCCCCcchhhhHHHHHHhhCCCCCCCCCHHH-HHHHHHhcC
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP---ATFGNDLWALGCTLYQMLSGTSPFKDTSEWL-IFQRIIARD 271 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~---~~~~sDiwSLG~ilyelltG~~PF~~~~~~~-~~~~i~~~~ 271 (489)
.. .....++|||+.|+|||++.... +..++|+|||||+||-+|+|.+||.+..... ..+.|..+.
T Consensus 330 g~-----------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~ 398 (475)
T KOG0615|consen 330 GE-----------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGR 398 (475)
T ss_pred cc-----------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCc
Confidence 43 34567999999999999998765 3457899999999999999999998766555 778899998
Q ss_pred CCCC----CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCc
Q 011287 272 IRFP----NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDW 319 (489)
Q Consensus 272 ~~~p----~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~ 319 (489)
+.|- ..++.++.+||.+||..||++||++ +++++||||+.++.
T Consensus 399 y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~-----~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 399 YAFGPLQWDRISEEALDLINWMLVVDPENRPSA-----DEALNHPWFKDAPC 445 (475)
T ss_pred ccccChhhhhhhHHHHHHHHHhhEeCcccCcCH-----HHHhcChhhhcccc
Confidence 8764 3589999999999999999999999 89999999997653
No 9
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-60 Score=448.12 Aligned_cols=290 Identities=36% Similarity=0.644 Sum_probs=271.7
Q ss_pred cCCCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEE
Q 011287 36 RAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQ 115 (489)
Q Consensus 36 ~~~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 115 (489)
.....+.+++||.++++||+|.||.|.+++.+.+|+.||||+++|..+.....+.....|-.+|+..+||++..|...|+
T Consensus 159 ~~~~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQ 238 (516)
T KOG0690|consen 159 AKRKNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQ 238 (516)
T ss_pred ccccceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhc
Confidence 34456779999999999999999999999999999999999999999998888888899999999999999999999999
Q ss_pred cCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCcccc
Q 011287 116 DTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPM 195 (489)
Q Consensus 116 ~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~ 195 (489)
..+.+++||||+.||+|+-++.+...|++..+++|.++|+.||.|||+++||+||||.+|+|+|.|||+||+|||+++.-
T Consensus 239 t~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 239 TQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred cCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence 99999999999999999999999989999999999999999999999999999999999999999999999999999842
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCC
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFP 275 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p 275 (489)
- .......+|||||.|+|||+|.+..|+.++|+|.+||++|||++|++||...+...++..|+..++.||
T Consensus 319 I----------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFP 388 (516)
T KOG0690|consen 319 I----------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFP 388 (516)
T ss_pred c----------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCC
Confidence 2 224567799999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccc-cCCCCCCCCCCCc
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNI-RGQTPPKLASEPM 335 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~-~~~~~p~~~~~~~ 335 (489)
..++++++.|+..+|.+||.+|++.+..+..++..|+||.+++|+.. ++..+|++.|...
T Consensus 389 r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVt 449 (516)
T KOG0690|consen 389 RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVT 449 (516)
T ss_pred ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCcc
Confidence 99999999999999999999999999888999999999999999986 4566777766543
No 10
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4e-56 Score=431.43 Aligned_cols=260 Identities=30% Similarity=0.505 Sum_probs=239.2
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC-
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF- 118 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~- 118 (489)
..++.+|.+.++.||+|+.|+||+|+++.|++.+|+|++.- ...+....++.+|+++++.++|||||++|+.|.++.
T Consensus 74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~ 151 (364)
T KOG0581|consen 74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE 151 (364)
T ss_pred cccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc
Confidence 34667799999999999999999999999999999999933 345667788999999999999999999999999998
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
.++++||||+||+|.+++.+.|+++|.....++.+++.||.|||. ++||||||||+||||+..|.|||||||.++.+.+
T Consensus 152 ~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn 231 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN 231 (364)
T ss_pred eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhh
Confidence 499999999999999999998999999999999999999999995 8999999999999999999999999999987653
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCC-----CHHHHHHHHHh-cC
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDT-----SEWLIFQRIIA-RD 271 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~-----~~~~~~~~i~~-~~ 271 (489)
...++|+||..|||||.+.+..|+.++||||||+.+.|+++|+.||... +..+++..|+. ..
T Consensus 232 ------------S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~pp 299 (364)
T KOG0581|consen 232 ------------SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPP 299 (364)
T ss_pred ------------hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCC
Confidence 2567999999999999999999999999999999999999999999875 67788889988 45
Q ss_pred CCCCCC-CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 272 IRFPNY-FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 272 ~~~p~~-~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
+.+|.. +|+++++||..||++||.+|+++ .++++|||++...
T Consensus 300 P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~-----~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 300 PRLPEGEFSPEFRSFVSCCLRKDPSERPSA-----KQLLQHPFIKKFE 342 (364)
T ss_pred CCCCcccCCHHHHHHHHHHhcCCcccCCCH-----HHHhcCHHHhhcc
Confidence 678887 99999999999999999999999 8999999998643
No 11
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-54 Score=442.27 Aligned_cols=261 Identities=39% Similarity=0.705 Sum_probs=241.1
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccch--hHHHHHHHHHHHHHhCC-CCCccEEEEEEEcC
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE--NKTAYVKLERIVLDQLD-HPGVVRLFFTFQDT 117 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~--~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~ 117 (489)
......|.+++.||+|+||.|++|++..+|..||+|++++...... .....+.+|+.+++++. ||||+++++++...
T Consensus 13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~ 92 (370)
T KOG0583|consen 13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATP 92 (370)
T ss_pred ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecC
Confidence 3557899999999999999999999999999999998887643322 35567779999999998 99999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC-CCEEEeeccCccccC
Q 011287 118 FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQ 196 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~-g~ikL~DFG~a~~~~ 196 (489)
..+|+|||||.||+|++++.+.+++.|..++.++.||+.||+|||++||+||||||||||++.+ +++||+|||++....
T Consensus 93 ~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 93 TKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred CeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 999999999998753
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCC-CC-CCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCC
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP-AT-FGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF 274 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~-~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~ 274 (489)
.......++|||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||...+...++.+|..+.+.+
T Consensus 173 ----------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~ 242 (370)
T KOG0583|consen 173 ----------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKI 242 (370)
T ss_pred ----------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccC
Confidence 1234566899999999999999877 74 88999999999999999999999999999999999999999
Q ss_pred CCCC-CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 275 PNYF-SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 275 p~~~-~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
|..+ ++++++||++||+.||.+|+++ .++++||||+.
T Consensus 243 p~~~~S~~~~~Li~~mL~~~P~~R~t~-----~~i~~h~w~~~ 280 (370)
T KOG0583|consen 243 PSYLLSPEARSLIEKMLVPDPSTRITL-----LEILEHPWFQK 280 (370)
T ss_pred CCCcCCHHHHHHHHHHcCCCcccCCCH-----HHHhhChhhcc
Confidence 9999 9999999999999999999998 88999999985
No 12
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-55 Score=433.01 Aligned_cols=287 Identities=32% Similarity=0.592 Sum_probs=263.1
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
.+++.+.|..-++||+|+||.||-++.+.||+.||+|.++|+.+.+........+|..+|.+++.++||.+-..|+..+.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~ 259 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA 259 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence 56789999999999999999999999999999999999999988888888888899999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 120 LYMALESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
+++||..|+||||.-+|.+.| .|++..+++|+++|+.||++||+.+||+|||||+|||+|+.||++|+|+|+|..+..
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999999999998876 699999999999999999999999999999999999999999999999999997654
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH----HHHHHHHHhcCCC
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE----WLIFQRIIARDIR 273 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~----~~~~~~i~~~~~~ 273 (489)
. ......+||.+|||||++.+..|+...|+|||||+||+|+.|+.||+...+ .++-++++.....
T Consensus 340 g-----------~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~e 408 (591)
T KOG0986|consen 340 G-----------KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEE 408 (591)
T ss_pred C-----------CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhh
Confidence 3 233355999999999999999999999999999999999999999987554 3566778888889
Q ss_pred CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC-CCCCCCCCCCccC
Q 011287 274 FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG-QTPPKLASEPMVQ 337 (489)
Q Consensus 274 ~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~-~~~p~~~~~~~~~ 337 (489)
+|+.+|+++++|++.+|.+||++|++....+.+++++||||++++|..+.. ..+|++.|.+...
T Consensus 409 y~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~aV 473 (591)
T KOG0986|consen 409 YSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGAV 473 (591)
T ss_pred cccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCcccc
Confidence 999999999999999999999999999988999999999999999999865 4567677666543
No 13
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-55 Score=427.09 Aligned_cols=284 Identities=35% Similarity=0.631 Sum_probs=265.0
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCC
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTF 118 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~ 118 (489)
..+...||.++.+||+|+||.|.+|..+.|.+.||||+++|..+...+..+-...|..+|.... -|++++|+..|+.-+
T Consensus 344 d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD 423 (683)
T KOG0696|consen 344 DRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD 423 (683)
T ss_pred cceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence 3567889999999999999999999999999999999999999998888888888999998874 679999999999999
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.+|+||||+.||+|..+|++-|+|-|..+.+|+++|+-||-|||++||++||||..|||++.+||+||+|||+++.-
T Consensus 424 RLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn--- 500 (683)
T KOG0696|consen 424 RLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN--- 500 (683)
T ss_pred heeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999842
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~ 278 (489)
........+|||||.|+|||++...+|+.++|+||+||+||||+.|++||.+.++.++++.|...+..+|..+
T Consensus 501 -------i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKsl 573 (683)
T KOG0696|consen 501 -------IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSL 573 (683)
T ss_pred -------ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccc
Confidence 2334567799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC-CCCCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG-QTPPKLASE 333 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~-~~~p~~~~~ 333 (489)
|.++.+++..+|.+.|.+|++++..+-.++..||||+.|||+.+.. +.+|++.|-
T Consensus 574 SkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk 629 (683)
T KOG0696|consen 574 SKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPK 629 (683)
T ss_pred cHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCc
Confidence 9999999999999999999999988889999999999999999855 455555543
No 14
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.7e-53 Score=428.11 Aligned_cols=274 Identities=40% Similarity=0.741 Sum_probs=252.1
Q ss_pred CCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC
Q 011287 39 QEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF 118 (489)
Q Consensus 39 ~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 118 (489)
...+.+++|++.+.||+|+||.||+|+++.+|+.||+|++.+...........+.+|+.+++.++||||+++++++.+..
T Consensus 12 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 91 (329)
T PTZ00263 12 TSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN 91 (329)
T ss_pred cCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC
Confidence 34567899999999999999999999999999999999998765555555667888999999999999999999999999
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.+|+||||+.||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++....
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~- 170 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD- 170 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC-
Confidence 9999999999999999999888999999999999999999999999999999999999999999999999999975432
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~ 278 (489)
...+.+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+....+.+|..+
T Consensus 171 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~ 238 (329)
T PTZ00263 171 ------------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWF 238 (329)
T ss_pred ------------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCC
Confidence 12346899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
+..+++||.+||+.||.+|+++...+++++++||||.+.+|+.+...
T Consensus 239 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~~~ 285 (329)
T PTZ00263 239 DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYAR 285 (329)
T ss_pred CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHHhC
Confidence 99999999999999999999977677899999999999999987543
No 15
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-54 Score=420.45 Aligned_cols=257 Identities=33% Similarity=0.581 Sum_probs=233.2
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
...+|.+.+.||+|+||+||+|+++.++..||||.+.+..+. ...++.+..|+.+|+.++|||||++++.+.+.+++|+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~-~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLN-KKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccC-HHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 468999999999999999999999999999999999887653 3456678889999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC------CCEEEeeccCccccC
Q 011287 123 ALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD------GHIKIADFGSVKPMQ 196 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~------g~ikL~DFG~a~~~~ 196 (489)
|||||.||||.++|++.+.+++..++.++.||+.||++||+++||||||||+||||+.+ -.+||+|||+|+.+.
T Consensus 87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 99999999999999999999999999999999999999999999999999999999875 358999999999876
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC---
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR--- 273 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~--- 273 (489)
+. ....+.||++.|||||++....|+.|+|+||+|+|+|||++|++||...+..+.+..+..+...
T Consensus 167 ~~-----------~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~ 235 (429)
T KOG0595|consen 167 PG-----------SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPV 235 (429)
T ss_pred ch-----------hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCc
Confidence 43 3456889999999999999999999999999999999999999999999999999888766533
Q ss_pred CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 274 FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 274 ~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
+|..+++...+|+..+|+.+|..|.+. .+-..|+|...
T Consensus 236 ~~~~~s~~~~~Ll~~ll~~~~~~~~~~-----~~~~~~~~l~~ 273 (429)
T KOG0595|consen 236 LPAELSNPLRELLISLLQRNPKDRISF-----EDFFDHPFLAA 273 (429)
T ss_pred hhhhccCchhhhhhHHHhcCccccCch-----HHhhhhhhccc
Confidence 445688888999999999999999876 67778887754
No 16
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-54 Score=441.39 Aligned_cols=265 Identities=34% Similarity=0.595 Sum_probs=246.4
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
...-|++++.||.|+.|.|-+|++..||+..|||++.+.....+.....+.+|+.+|+.+.||||++||+++.+...+|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 45678999999999999999999999999999999988765555667789999999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 123 ALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|+||++||.|++++.+.|++++.++..++.||+.|+.|||..+|+||||||||+||+..++|||+|||.|..-.+
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~----- 164 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP----- 164 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999975432
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCC-CCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHH
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPA-TFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDA 281 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~ 281 (489)
+....+.||++.|.|||++.+.+| +.++||||.|||||.||+|++||.+.|-..++.++..+.+..|..++++
T Consensus 165 ------gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~e 238 (786)
T KOG0588|consen 165 ------GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSE 238 (786)
T ss_pred ------CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHH
Confidence 234457899999999999999987 6889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCccccc
Q 011287 282 ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIR 323 (489)
Q Consensus 282 ~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~ 323 (489)
+++||++||..||++|+|. ++|++|||+.+..-....
T Consensus 239 aQdLLr~ml~VDp~~RiT~-----~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 239 AQDLLRRMLDVDPSTRITT-----EEILKHPFLSGYTSLPSS 275 (786)
T ss_pred HHHHHHHHhccCccccccH-----HHHhhCchhhcCCCCChh
Confidence 9999999999999999998 899999999987654444
No 17
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-55 Score=470.99 Aligned_cols=278 Identities=40% Similarity=0.679 Sum_probs=255.7
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEE
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~l 120 (489)
++..+||+|+++||+|+||.|.+++.+.|++.||+|++.|-...+......+..|+.+|...+.+-|++|+..|+|+.++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 56789999999999999999999999999999999999997777777888899999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
|+||||++||||..++.+.+++++..++||+++|+.||.-||+.|+|||||||+|||||..|||||+|||.+-.+....
T Consensus 151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG- 229 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG- 229 (1317)
T ss_pred EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988775432
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhc----C-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--CCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLN----S-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR--DIR 273 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~----~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~--~~~ 273 (489)
.-.....||||.|.|||+|. + +.|+..+|+|||||++|||+.|..||.+.+-.+++.+|+.- .+.
T Consensus 230 --------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~ 301 (1317)
T KOG0612|consen 230 --------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLS 301 (1317)
T ss_pred --------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcC
Confidence 33445679999999999994 3 45899999999999999999999999999999999999875 788
Q ss_pred CC--CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCCCCCC
Q 011287 274 FP--NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQTPPKL 330 (489)
Q Consensus 274 ~p--~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~p~~ 330 (489)
|| ..+|.++++||.++|+ +|+.|++- .|+.++++||||.|++|++++...||..
T Consensus 302 FP~~~~VSeeakdLI~~ll~-~~e~RLgr--ngiedik~HpFF~g~~W~~iR~~~pP~v 357 (1317)
T KOG0612|consen 302 FPDETDVSEEAKDLIEALLC-DREVRLGR--NGIEDIKNHPFFEGIDWDNIRESVPPVV 357 (1317)
T ss_pred CCcccccCHHHHHHHHHHhc-Chhhhccc--ccHHHHHhCccccCCChhhhhhcCCCCC
Confidence 99 4689999999999994 79999975 5789999999999999999998877754
No 18
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-54 Score=396.84 Aligned_cols=262 Identities=34% Similarity=0.572 Sum_probs=249.2
Q ss_pred CCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 38 ~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
....++++||++++.||+|-||.||+|+.++++-.||+|++.|+.+...+...++.+|+++.+.|+||||+++|++|.|.
T Consensus 15 ~~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~ 94 (281)
T KOG0580|consen 15 ATKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS 94 (281)
T ss_pred cccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEeccCCCChHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCcccc
Q 011287 118 FSLYMALESCEGGELFDQIT--SKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPM 195 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~--~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~ 195 (489)
..+|+++||+.+|+|+..+. +..+|++..+..|+.|++.||.|||..+|+||||||+|+|++.+|.+|++|||-+..-
T Consensus 95 ~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 99999999999999999999 6678999999999999999999999999999999999999999999999999988642
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCC
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFP 275 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p 275 (489)
. ..+..+.|||..|.+||+..+..++..+|+|++|++.||++.|.+||...+..+++++|.+.++.+|
T Consensus 175 p------------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p 242 (281)
T KOG0580|consen 175 P------------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP 242 (281)
T ss_pred C------------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC
Confidence 2 3466789999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
..++.+++|||.+||..+|.+|+.. .+++.|||...
T Consensus 243 ~~is~~a~dlI~~ll~~~p~~r~~l-----~~v~~hpwI~a 278 (281)
T KOG0580|consen 243 STISGGAADLISRLLVKNPIERLAL-----TEVMDHPWIVA 278 (281)
T ss_pred cccChhHHHHHHHHhccCccccccH-----HHHhhhHHHHh
Confidence 9999999999999999999999988 88999999753
No 19
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2e-52 Score=415.28 Aligned_cols=267 Identities=38% Similarity=0.665 Sum_probs=244.9
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|++..+|+.||+|++.............+.+|+.+++.++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 58999999999999999999999999999999997654444445567888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~------- 153 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD------- 153 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC-------
Confidence 9999999999999888999999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARD 284 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 284 (489)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....++.+......+|..+++.+++
T Consensus 154 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 227 (291)
T cd05612 154 ------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKD 227 (291)
T ss_pred ------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHH
Confidence 12245799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
||++||+.||.+|++.....+.+++.||||..++|..+..
T Consensus 228 li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~ 267 (291)
T cd05612 228 LIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQ 267 (291)
T ss_pred HHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhc
Confidence 9999999999999986555679999999999999987654
No 20
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.5e-54 Score=403.94 Aligned_cols=258 Identities=28% Similarity=0.486 Sum_probs=223.8
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
++.|+.+.++|+|+||+||+|++++||+.||||.+.-.. ..........+|+.+|+.|+|||+|.|+++|.....+++|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 468999999999999999999999999999999985442 2223345567899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
+|||+. ++++-+.+. ..++++.++.|++|++.|+.|||++++||||||||||||+.+|.+||||||+|+.+..+
T Consensus 80 FE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p---- 154 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP---- 154 (396)
T ss_pred eeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC----
Confidence 999987 666777665 45999999999999999999999999999999999999999999999999999987532
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-----------
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR----------- 270 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~----------- 270 (489)
......+|.|.+|+|||++.+ .+|+..+||||+||++.||++|.+.|.+.++.+++..|...
T Consensus 155 ------gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~i 228 (396)
T KOG0593|consen 155 ------GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSI 228 (396)
T ss_pred ------cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHH
Confidence 234557899999999999977 67999999999999999999999999999998887666541
Q ss_pred --------CCCCC------------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 271 --------DIRFP------------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 271 --------~~~~p------------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
.+.+| +.++..+.||+++||..||.+|+++ ++++.||||.++-
T Consensus 229 F~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc-----~qll~H~yFd~~~ 291 (396)
T KOG0593|consen 229 FSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSC-----EQLLHHPYFDGFI 291 (396)
T ss_pred hccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccH-----HHHhcChHHHHHH
Confidence 11222 1257789999999999999999999 8899999997543
No 21
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=9e-52 Score=416.89 Aligned_cols=264 Identities=38% Similarity=0.661 Sum_probs=240.0
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGG 130 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg 130 (489)
+.||+|+||.||+|++..+|+.||+|++.+...........+.+|..+++.++||||+++++.|.+...+|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999999999999999998765544555566778999999999999999999999999999999999999
Q ss_pred ChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCC
Q 011287 131 ELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDD 210 (489)
Q Consensus 131 ~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~ 210 (489)
+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~----------~~ 150 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD----------GA 150 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC----------CC
Confidence 99999998889999999999999999999999999999999999999999999999999998743211 12
Q ss_pred CccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhh
Q 011287 211 KACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRLL 290 (489)
Q Consensus 211 ~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L 290 (489)
....++||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+......+|..+++++.+||.+||
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L 230 (323)
T cd05571 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLL 230 (323)
T ss_pred cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHc
Confidence 23467899999999999999999999999999999999999999999998888889998899999999999999999999
Q ss_pred ccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 291 DVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 291 ~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
+.||++||+.......++++||||.+++|..+..
T Consensus 231 ~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~ 264 (323)
T cd05571 231 KKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQ 264 (323)
T ss_pred cCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 9999999976555669999999999999998764
No 22
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=7.4e-52 Score=420.65 Aligned_cols=273 Identities=34% Similarity=0.614 Sum_probs=247.8
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCC-cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTG-TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF 118 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg-~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 118 (489)
..+..++|++.+.||+|+||.||+|++..++ ..||+|++.+...........+.+|+.+++.++||||+++++++.+..
T Consensus 25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~ 104 (340)
T PTZ00426 25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES 104 (340)
T ss_pred CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence 3467889999999999999999999976654 789999998765555556667888999999999999999999999999
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.+|+||||+.+|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++.+..
T Consensus 105 ~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~- 183 (340)
T PTZ00426 105 YLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT- 183 (340)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC-
Confidence 9999999999999999999888999999999999999999999999999999999999999999999999999976432
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~ 278 (489)
...+.+||+.|+|||++.+..++.++|+|||||++|+|++|.+||.+.+...+++.+......+|..+
T Consensus 184 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~ 251 (340)
T PTZ00426 184 ------------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFL 251 (340)
T ss_pred ------------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCC
Confidence 12356899999999999998899999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
++.+++||++||+.||.+|++....+++++++||||.+++|..+...
T Consensus 252 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~ 298 (340)
T PTZ00426 252 DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHK 298 (340)
T ss_pred CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhC
Confidence 99999999999999999998655556799999999999999876543
No 23
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-54 Score=404.04 Aligned_cols=250 Identities=31% Similarity=0.543 Sum_probs=225.3
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEE-EEEcCC
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFF-TFQDTF 118 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~-~~~~~~ 118 (489)
...++.+|++++.||+|+||+||+|+...+|..+|.|.+.-..+. ....+.+..|+.+|+.|+|||||++|+ .|.++.
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md-~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ 92 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMD-AKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN 92 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhcc-HHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc
Confidence 567789999999999999999999999999999999999855444 445566777999999999999999998 555444
Q ss_pred E-EEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHh--CC--cEeeccCCCCeeeCCCCCEEEeec
Q 011287 119 S-LYMALESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHS--MG--LIHRDIKPENLLLTADGHIKIADF 189 (489)
Q Consensus 119 ~-lylV~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~--~g--IiHrDLKpeNILl~~~g~ikL~DF 189 (489)
. +++|||||.+|||...|+. ...++|..++.++.|++.||.+||. .. |+||||||.||+|+.+|.+||+||
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf 172 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF 172 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence 4 9999999999999998864 3469999999999999999999999 44 999999999999999999999999
Q ss_pred cCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh
Q 011287 190 GSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA 269 (489)
Q Consensus 190 G~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~ 269 (489)
|+++.+... ..-+.++||||.|||||.+.+.+|+.++|||||||++|||+.-++||.+.+-....++|.+
T Consensus 173 GL~r~l~s~----------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~q 242 (375)
T KOG0591|consen 173 GLGRFLSSK----------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQ 242 (375)
T ss_pred hhHhHhcch----------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHc
Confidence 999987543 2345689999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC-CC-CCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 270 RDIR-FP-NYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 270 ~~~~-~p-~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
++++ +| +.+|.++..||..|++.||..||+.
T Consensus 243 gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 243 GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence 9886 77 6789999999999999999999985
No 24
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-53 Score=423.20 Aligned_cols=257 Identities=33% Similarity=0.516 Sum_probs=228.8
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCC-
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTF- 118 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~- 118 (489)
...+++|.+++.||.|+||.||+|+.+.+|..||||.|++++...++ ..-.||+..|++|+ |||||+|++++.+.+
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee--~~nLREvksL~kln~hpniikL~Evi~d~~~ 83 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEE--CMNLREVKSLRKLNPHPNIIKLKEVIRDNDR 83 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHH--HHHHHHHHHHHhcCCCCcchhhHHHhhccCc
Confidence 34578999999999999999999999999999999999887665443 34457999999998 999999999999988
Q ss_pred EEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 119 SLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
.+|||||||+. +|.++++.+ ..|++..++.|++||+.||+|+|.+|++|||+||||||+..+..+||+|||+|+....
T Consensus 84 ~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 84 ILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence 99999999976 999999865 4699999999999999999999999999999999999999888999999999997653
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhc-CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh-------
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLN-SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA------- 269 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~------- 269 (489)
......+|.|.+|+|||+|. ...|+.+.||||+|||++|+++-++.|.|.++.+++.+|+.
T Consensus 163 -----------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~ 231 (538)
T KOG0661|consen 163 -----------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDK 231 (538)
T ss_pred -----------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCcc
Confidence 33455789999999999975 55699999999999999999999999999999999888875
Q ss_pred ------------cCCCCCC-----------CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 270 ------------RDIRFPN-----------YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 270 ------------~~~~~p~-----------~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.++.||. ..+.++.+||.+||..||.+|||| +++++||||+.
T Consensus 232 ~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA-----~~al~~pffq~ 296 (538)
T KOG0661|consen 232 DSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTA-----SQALQHPFFQV 296 (538)
T ss_pred ccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccH-----HHHhcCccccc
Confidence 2344442 368999999999999999999999 88999999974
No 25
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-54 Score=430.02 Aligned_cols=290 Identities=35% Similarity=0.639 Sum_probs=269.9
Q ss_pred ccccCCCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEE
Q 011287 33 FAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFF 112 (489)
Q Consensus 33 ~~~~~~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~ 112 (489)
..+........+.+++++..||-|+||.|=+++.......+|+|+++|.++......+++..|+.+|..++.|+||+||-
T Consensus 408 ~~~~~e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYr 487 (732)
T KOG0614|consen 408 EDFAEEFAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYR 487 (732)
T ss_pred HHHHhhhcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHH
Confidence 33444555677899999999999999999999987766679999999999999999999999999999999999999999
Q ss_pred EEEcCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCc
Q 011287 113 TFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 113 ~~~~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a 192 (489)
+|.|+.++|++||-|-||+|+..+...|.|++..+++|++++++|++|||++|||+|||||||.+++.+|-+||.|||+|
T Consensus 488 Tfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFA 567 (732)
T KOG0614|consen 488 TFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFA 567 (732)
T ss_pred HhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-- 270 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-- 270 (489)
+.+.. ..++.+|||||.|+|||++.++..+.++|.||||+++||||+|.+||.+.++..+++.|+++
T Consensus 568 Kki~~-----------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid 636 (732)
T KOG0614|consen 568 KKIGS-----------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID 636 (732)
T ss_pred HHhcc-----------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh
Confidence 98754 45677999999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCC-CCCCCCC
Q 011287 271 DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQT-PPKLASE 333 (489)
Q Consensus 271 ~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~-~p~~~~~ 333 (489)
...||..++..+.+||+++...+|.+|++...+|+.+|++|.||.++||+.++..+ ||++.++
T Consensus 637 ~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~ 700 (732)
T KOG0614|consen 637 KIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPS 700 (732)
T ss_pred hhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCcccc
Confidence 46799999999999999999999999999888999999999999999999998764 5555443
No 26
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=4.2e-51 Score=418.70 Aligned_cols=279 Identities=37% Similarity=0.665 Sum_probs=238.7
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++++.||+|+||+||+|++..+++.||+|++.+...........+..|+.++..++||||+++++.+++...+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 58999999999999999999999999999999998765555556677888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc-
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL- 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~- 203 (489)
|||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++.+........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~ 160 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence 9999999999999888999999999999999999999999999999999999999999999999999986543211000
Q ss_pred -------CC-----------------CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC
Q 011287 204 -------PN-----------------AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259 (489)
Q Consensus 204 -------~~-----------------~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~ 259 (489)
+. ..........+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~ 240 (363)
T cd05628 161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (363)
T ss_pred ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence 00 000111235689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc--CCCCCC--CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCC
Q 011287 260 EWLIFQRIIAR--DIRFPN--YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQT 326 (489)
Q Consensus 260 ~~~~~~~i~~~--~~~~p~--~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~ 326 (489)
..+.+.++... .+.+|+ .+++++++||.+|++ +|.+|++. .+++++++||||++++|+.+....
T Consensus 241 ~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r--~~~~ei~~hp~f~~~~~~~~~~~~ 308 (363)
T cd05628 241 PQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGA--PGVEEIKTNPFFEGVDWEHIRERP 308 (363)
T ss_pred HHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCC--CCHHHHhCCCCCCCCCHHHHHhCC
Confidence 98888888763 455665 478999999999886 67766542 134999999999999999987543
No 27
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=7.1e-51 Score=410.43 Aligned_cols=270 Identities=36% Similarity=0.643 Sum_probs=243.9
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCC-CccEEEEEEEcCCEEEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP-GVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp-nIv~l~~~~~~~~~lylV~ 124 (489)
+|++++.||+|+||.||+|++..+++.||+|++.+...........+..|..++..++|+ +|++++++|.+...+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 699999999999999999999999999999999876555555566677899999999764 6888999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.++|+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~------ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG------ 154 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC------
Confidence 99999999999998888999999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARD 284 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 284 (489)
.......+||+.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+....++.+......+|..+++++.+
T Consensus 155 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 230 (324)
T cd05587 155 ----GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVS 230 (324)
T ss_pred ----CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 1223456899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
||.+||..||.+|+++.....+++++||||++++|..+...
T Consensus 231 li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~ 271 (324)
T cd05587 231 ICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERR 271 (324)
T ss_pred HHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhC
Confidence 99999999999999987667789999999999999887543
No 28
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=7.1e-51 Score=410.27 Aligned_cols=270 Identities=36% Similarity=0.631 Sum_probs=244.5
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~lylV~ 124 (489)
||++++.||+|+||.||+|++..+++.||+|++.+..............|..++..+ +||+|+++++.+.+...+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 699999999999999999999999999999999876554455555666788888777 5899999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++|+|..++.+.+.+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~------ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD------ 154 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC------
Confidence 99999999999998888999999999999999999999999999999999999999999999999998743211
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARD 284 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 284 (489)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...+++.+......+|..++.++.+
T Consensus 155 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~ 230 (323)
T cd05616 155 ----GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVA 230 (323)
T ss_pred ----CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHH
Confidence 1223356899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
||.+||+.||.+|+++...+..++++||||+.++|+.+...
T Consensus 231 li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~ 271 (323)
T cd05616 231 ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERK 271 (323)
T ss_pred HHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhC
Confidence 99999999999999987667799999999999999988654
No 29
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=6.5e-51 Score=403.09 Aligned_cols=276 Identities=32% Similarity=0.564 Sum_probs=238.6
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
.|++.+.||+|+||.||+|.+..+|+.||+|.+.+...........+.+|+.+++.++|++|+++++++.+...+|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 48899999999999999999999999999999987655444444567789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 126 SCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 126 ~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|+++|+|..++... ..+++..+..++.|++.||+|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-----
Confidence 99999998887643 35899999999999999999999999999999999999999999999999998764321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHH----HHHHHHHhcCCCCCCCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEW----LIFQRIIARDIRFPNYFS 279 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~----~~~~~i~~~~~~~p~~~~ 279 (489)
......+||..|+|||++.+..++.++|||||||++|+|++|+.||.+.+.. .....+......++..++
T Consensus 156 ------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s 229 (285)
T cd05631 156 ------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFS 229 (285)
T ss_pred ------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCC
Confidence 1123457999999999999999999999999999999999999999876542 333444455667888899
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC-CCCCCCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ-TPPKLAS 332 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~-~~p~~~~ 332 (489)
+++.+||++||+.||.+||++.+.+.+++++||||.+++|+.+... .+|++.|
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05631 230 EDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCP 283 (285)
T ss_pred HHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCC
Confidence 9999999999999999999987777899999999999999998764 3444443
No 30
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.5e-51 Score=417.06 Aligned_cols=281 Identities=39% Similarity=0.693 Sum_probs=240.2
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++++.||+|+||+||+|++..+|+.||||++.+...........+.+|+.+++.++||||+++++.|.+...+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 58999999999999999999999999999999998765444555667888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
|||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||+++.+.........
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999998765332110000
Q ss_pred CC----------------------------CCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCC
Q 011287 205 NA----------------------------ASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK 256 (489)
Q Consensus 205 ~~----------------------------~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~ 256 (489)
.. .......+.+||+.|+|||++....++.++|||||||++|+|++|.+||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~ 240 (364)
T cd05599 161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240 (364)
T ss_pred ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence 00 00001224589999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcC--CCCCC--CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCCCC
Q 011287 257 DTSEWLIFQRIIARD--IRFPN--YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQTPP 328 (489)
Q Consensus 257 ~~~~~~~~~~i~~~~--~~~p~--~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~p 328 (489)
+.+....+..+.... +.+|. .+++++++||++||. +|.+|++. .++++++.||||++++|+.+....+|
T Consensus 241 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~--~~~~~ll~h~~~~~~~~~~~~~~~~~ 313 (364)
T cd05599 241 SDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGN--NGVNEIKSHPFFKGVDWEHIRERPAP 313 (364)
T ss_pred CCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCC--CCHHHHhcCCCcCCCCHHHHhhcCCC
Confidence 999888888777543 34454 468999999999996 99999983 23499999999999999987655444
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.4e-52 Score=421.64 Aligned_cols=256 Identities=31% Similarity=0.579 Sum_probs=239.9
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
+++|.+.+.||+|+||.||+|+.+.|.+.||||.+.|... .+.....+.+|+.+++.++|||||.++++|+....+++|
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 5789999999999999999999999999999999988643 344567789999999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
+|||.| +|+.++...+.++|+.++.++++++.||.|||+++|.|||+||.|||+..+|++|+||||+|+.+....
T Consensus 80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t---- 154 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT---- 154 (808)
T ss_pred ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc----
Confidence 999987 999999999999999999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAAR 283 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 283 (489)
....+.-|||.|||||++.+.+|+..+|+||||||+|||++|++||...+-......|.......|...+..+.
T Consensus 155 ------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~ 228 (808)
T KOG0597|consen 155 ------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFV 228 (808)
T ss_pred ------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHH
Confidence 33456789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 284 DLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 284 ~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.|++.+|.+||.+|++= .+++.|||.++
T Consensus 229 nfl~gLL~kdP~~RltW-----~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 229 NFLQGLLIKDPAQRLTW-----TDLLGHPFWKG 256 (808)
T ss_pred HHHHHHhhcChhhcccH-----HHHhcChHHhh
Confidence 99999999999999976 88999999875
No 32
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-51 Score=411.21 Aligned_cols=259 Identities=30% Similarity=0.492 Sum_probs=228.9
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC--C
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT--F 118 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~ 118 (489)
....+.|+.++.||+|+||.||+|++..||+.||+|.+.... .++.......+|+.+|++|+||||++|.+...+. .
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~-~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~ 191 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDN-EKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSG 191 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeeccc-CCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCc
Confidence 456778999999999999999999999999999999997663 3455666778899999999999999999988766 7
Q ss_pred EEEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 119 SLYMALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
.+|+|+|||+. ||..++...+ .|++.+++.|+.||+.||+|||++||+|||||.+|||||.+|.+||+|||+|+.+..
T Consensus 192 siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 192 SIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred eEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 89999999987 9999888743 699999999999999999999999999999999999999999999999999998765
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCC-CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-----
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP-ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD----- 271 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~----- 271 (489)
.. .....+.|-|.+|+|||+|.+.. |+.++|+||+||||.||++|++.|.+.++.+++.+|.+.-
T Consensus 271 ~~---------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e 341 (560)
T KOG0600|consen 271 SG---------SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTE 341 (560)
T ss_pred CC---------CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCCh
Confidence 43 22355779999999999998754 9999999999999999999999999999999999987620
Q ss_pred -----CCCC-------------------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 272 -----IRFP-------------------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 272 -----~~~p-------------------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
..+| ..++..+.+|+..||..||.+|.|| .+++.|+||.
T Consensus 342 ~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA-----~~aL~seyF~ 404 (560)
T KOG0600|consen 342 DYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTA-----SSALQSEYFT 404 (560)
T ss_pred hccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccH-----HHHhcCcccc
Confidence 1122 2368999999999999999999999 8899999994
No 33
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.1e-50 Score=407.02 Aligned_cols=270 Identities=35% Similarity=0.642 Sum_probs=244.0
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCCEEEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~lylV~ 124 (489)
+|++.+.||+|+||.||+|+++.+|+.||+|++.+..............|..++..+. |++|+++++.|.+...+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 6899999999999999999999999999999998765444555566777888888885 577889999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||++||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+++++|+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~------ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD------ 154 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC------
Confidence 99999999999998889999999999999999999999999999999999999999999999999998743221
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARD 284 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 284 (489)
.......+||+.|+|||++.+..++.++|+|||||++|+|++|++||.+.+.....+.+......+|..++.++.+
T Consensus 155 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 230 (323)
T cd05615 155 ----GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVS 230 (323)
T ss_pred ----CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHH
Confidence 1123356799999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
|+.+||+.||.+|+++.+...+++++||||.+++|..+...
T Consensus 231 li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~ 271 (323)
T cd05615 231 ICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENR 271 (323)
T ss_pred HHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcC
Confidence 99999999999999988778899999999999999987654
No 34
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.9e-50 Score=408.31 Aligned_cols=264 Identities=38% Similarity=0.666 Sum_probs=239.2
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGG 130 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg 130 (489)
+.||+|+||.||+|++..+|+.||+|++.+...........+.+|..+++.++||||+++++++.+...+|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999999999999999998765555555667788999999999999999999999999999999999999
Q ss_pred ChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCC
Q 011287 131 ELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDD 210 (489)
Q Consensus 131 ~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~ 210 (489)
+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~----------~~ 150 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD----------AA 150 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----------cc
Confidence 99999988888999999999999999999999999999999999999999999999999998753211 11
Q ss_pred CccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhh
Q 011287 211 KACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRLL 290 (489)
Q Consensus 211 ~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L 290 (489)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..+++++.+||++||
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L 230 (328)
T cd05593 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLL 230 (328)
T ss_pred ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHc
Confidence 22356899999999999998999999999999999999999999999888888888888889999999999999999999
Q ss_pred ccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 291 DVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 291 ~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
+.||++|++.....+.++++||||.+++|..+..
T Consensus 231 ~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~ 264 (328)
T cd05593 231 IKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYD 264 (328)
T ss_pred CCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 9999999976555679999999999999988754
No 35
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.3e-50 Score=417.20 Aligned_cols=282 Identities=38% Similarity=0.655 Sum_probs=238.2
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|.+++.||+|+||.||+|++..+|+.||||++.+...........+.+|+.+++.++||||++++++|.+...+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 58999999999999999999999999999999997765445555677888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc--
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV-- 202 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~-- 202 (489)
|||+||+|.+++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.+|+++|+|||+++.+.......
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 160 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY 160 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 999999999999988889999999999999999999999999999999999999999999999999997442211000
Q ss_pred ---cCC--CC------------------------------CCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHH
Q 011287 203 ---LPN--AA------------------------------SDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQ 247 (489)
Q Consensus 203 ---~~~--~~------------------------------~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilye 247 (489)
... .. ......+.+||+.|+|||++.+..++.++|||||||++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (377)
T cd05629 161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE 240 (377)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence 000 00 0000123679999999999999999999999999999999
Q ss_pred HhhCCCCCCCCCHHHHHHHHHh--cCCCCCC--CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCccccc
Q 011287 248 MLSGTSPFKDTSEWLIFQRIIA--RDIRFPN--YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIR 323 (489)
Q Consensus 248 lltG~~PF~~~~~~~~~~~i~~--~~~~~p~--~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~ 323 (489)
|++|.+||.+.+....+..+.. ....+|. .++.++++||.+||+ +|.+|++. .+..+++.||||++++|+.+.
T Consensus 241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r--~~~~~~l~hp~~~~~~~~~~~ 317 (377)
T cd05629 241 CLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGR--GGAHEIKSHPFFRGVDWDTIR 317 (377)
T ss_pred hhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCC--CCHHHHhcCCCcCCCCHHHHc
Confidence 9999999999888888888775 3455665 478999999999997 88887632 134899999999999999987
Q ss_pred CCCCCC
Q 011287 324 GQTPPK 329 (489)
Q Consensus 324 ~~~~p~ 329 (489)
...+|.
T Consensus 318 ~~~~~~ 323 (377)
T cd05629 318 QIRAPF 323 (377)
T ss_pred cCCCCc
Confidence 555443
No 36
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.6e-50 Score=404.79 Aligned_cols=264 Identities=34% Similarity=0.657 Sum_probs=238.1
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+.||+|+||.||+|+++.+++.||+|++.+..............|..++..+ +||||++++++|.+...+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4799999999999999999999999999876554455556667788888776 799999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++.+.+.+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++..... .
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~----------~ 150 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN----------G 150 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC----------C
Confidence 999999998889999999999999999999999999999999999999999999999999998753211 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...++..+......+|..++.++++||++|
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~ 230 (320)
T cd05590 151 KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAF 230 (320)
T ss_pred CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Confidence 22345689999999999999999999999999999999999999999999999999999998999999999999999999
Q ss_pred hccCCCCCCCCCC-CCHHHHhcCCCCCCCCcccccC
Q 011287 290 LDVDPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 290 L~~dP~~R~t~~~-~~~~~l~~hpff~~i~~~~~~~ 324 (489)
|+.||.+||++.+ .+.+++++||||.+++|+.+..
T Consensus 231 L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~ 266 (320)
T cd05590 231 MTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNR 266 (320)
T ss_pred cccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 9999999999855 5679999999999999998754
No 37
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.8e-50 Score=415.25 Aligned_cols=280 Identities=35% Similarity=0.563 Sum_probs=236.0
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
..|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+...+|+||
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence 36999999999999999999999999999999998766555566677889999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc-
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL- 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~- 203 (489)
|||+||+|.+++.+.+.+++..++.+++||+.||+|||+.||+||||||+||||+.+|++||+|||+++.+........
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~ 160 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY 160 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence 9999999999999888899999999999999999999999999999999999999999999999999865421100000
Q ss_pred --------C----------------------------CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHH
Q 011287 204 --------P----------------------------NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQ 247 (489)
Q Consensus 204 --------~----------------------------~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilye 247 (489)
. .........+++||+.|+|||++.+..++.++|||||||++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~e 240 (381)
T cd05626 161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE 240 (381)
T ss_pred cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHH
Confidence 0 0000112245789999999999999899999999999999999
Q ss_pred HhhCCCCCCCCCHHHHHHHHHh--cCCCCCC--CCCHHHHHHHHHhhccCC--CCCCCCCCCCHHHHhcCCCCCCCCccc
Q 011287 248 MLSGTSPFKDTSEWLIFQRIIA--RDIRFPN--YFSDAARDLIDRLLDVDP--SGRPGAGPGGYAVLKMHPFFKGIDWKN 321 (489)
Q Consensus 248 lltG~~PF~~~~~~~~~~~i~~--~~~~~p~--~~~~~~~~Li~~~L~~dP--~~R~t~~~~~~~~l~~hpff~~i~~~~ 321 (489)
|++|.+||...+.......+.. ....+|. .+++++++||.+||+.++ ..|+++ +++++||||++++|..
T Consensus 241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~-----~~~l~hp~f~~~~~~~ 315 (381)
T cd05626 241 MLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGA-----DDIKAHPFFSEVDFSS 315 (381)
T ss_pred HHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCH-----HHHhcCcccCCCChhH
Confidence 9999999999887777666664 3345554 579999999999776544 449988 8999999999999987
Q ss_pred ccCCCCCC
Q 011287 322 IRGQTPPK 329 (489)
Q Consensus 322 ~~~~~~p~ 329 (489)
.....+++
T Consensus 316 ~~~~~~~~ 323 (381)
T cd05626 316 DIRTQPAP 323 (381)
T ss_pred HhhcCCCC
Confidence 55444443
No 38
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.7e-50 Score=404.11 Aligned_cols=260 Identities=41% Similarity=0.696 Sum_probs=235.9
Q ss_pred EeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCCCh
Q 011287 53 YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGEL 132 (489)
Q Consensus 53 LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L 132 (489)
||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+...+|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999999999999999876544455556677899999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCc
Q 011287 133 FDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212 (489)
Q Consensus 133 ~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~ 212 (489)
.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.++|+|||+++..... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~----------~~~~ 150 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD----------DDKT 150 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC----------CCcc
Confidence 999998889999999999999999999999999999999999999999999999999998753221 1223
Q ss_pred cceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhhcc
Q 011287 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRLLDV 292 (489)
Q Consensus 213 ~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L~~ 292 (489)
...+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+....++.+......+|..+++++++||.+||+.
T Consensus 151 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 230 (312)
T cd05585 151 NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSR 230 (312)
T ss_pred ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 293 DPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 293 dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
||.+||+.. +..++++||||...+|..+..
T Consensus 231 dp~~R~~~~--~~~e~l~hp~~~~~~~~~~~~ 260 (312)
T cd05585 231 DPTRRLGYN--GAQEIKNHPFFSQLSWKKLLM 260 (312)
T ss_pred CHHHcCCCC--CHHHHHcCCCcCCCCHHHHHh
Confidence 999999863 358999999999999987643
No 39
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.6e-50 Score=413.93 Aligned_cols=278 Identities=38% Similarity=0.680 Sum_probs=240.1
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|+++.+++.||+|++.+...........+..|+.++..++||+|+++++.|++...+|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 58999999999999999999999999999999998765555556677888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc-
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL- 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~- 203 (489)
|||+||+|.+++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.+|+++|+|||++..+........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence 9999999999999888899999999999999999999999999999999999999999999999999876532210000
Q ss_pred -------C-----------------CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC
Q 011287 204 -------P-----------------NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259 (489)
Q Consensus 204 -------~-----------------~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~ 259 (489)
+ .........+.+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~ 240 (360)
T cd05627 161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (360)
T ss_pred cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence 0 0000112235689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc--CCCCCCC--CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 260 EWLIFQRIIAR--DIRFPNY--FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 260 ~~~~~~~i~~~--~~~~p~~--~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
....+.++... .+.+|.. +++++++||.+|+ .||.+|+++. ++.++++||||++++|..+...
T Consensus 241 ~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~--~~~ei~~hp~f~~~~~~~~~~~ 307 (360)
T cd05627 241 PQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSN--GVEEIKSHPFFEGVDWGHIRER 307 (360)
T ss_pred HHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCC--CHHHHhcCCCCCCCCHHHHhcC
Confidence 88888888753 3455653 7899999999987 5999999863 5699999999999999998654
No 40
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.6e-50 Score=423.32 Aligned_cols=393 Identities=25% Similarity=0.348 Sum_probs=287.0
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCC-CcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDT-GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~t-g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
...|.+.+.||+|++|.||+|.+..+ +..||+|.+... .......+.+|+.+|+.++||||++++++|.+...+|+
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence 44599999999999999999999877 788999976433 34445667889999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 123 ALESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+...
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 9999999999987753 356999999999999999999999999999999999999999999999999999865432
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-CCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-RFPNY 277 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~~p~~ 277 (489)
. ......+++||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...++..+..+.. .+|..
T Consensus 223 ~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 294 (478)
T PTZ00267 223 V--------SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCP 294 (478)
T ss_pred c--------ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcc
Confidence 1 11223467899999999999999999999999999999999999999999988888888877655 46778
Q ss_pred CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCc--ccccCCCCCCCCCCCccCCCCCCCCCCCCCCCCCCC
Q 011287 278 FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDW--KNIRGQTPPKLASEPMVQSGEGDDVHDSSWNPSHIG 355 (489)
Q Consensus 278 ~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (489)
+++++.+||.+||+.||++||++ ++++.|+|++.+.- ..+.... .. .+.. +. .
T Consensus 295 ~s~~~~~li~~~L~~dP~~Rps~-----~~~l~~~~~~~~~~~~~~~~~~~-~~-------~~~~--~~----------~ 349 (478)
T PTZ00267 295 VSSGMKALLDPLLSKNPALRPTT-----QQLLHTEFLKYVANLFQDIVRHS-ET-------ISPH--DR----------E 349 (478)
T ss_pred CCHHHHHHHHHHhccChhhCcCH-----HHHHhCHHHHHHHHHHHHHhhhh-hh-------cChh--hH----------H
Confidence 99999999999999999999998 88999999864321 1110000 00 0000 00 0
Q ss_pred CccccccCCCCCCCCCCCcccccccccccCcccccccCCCceEEEEEeeehhhhhh-ccceeEEEecCCeEEE-ECCCC-
Q 011287 356 DISAKINDGNGGASSSEGSITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLT-SKKVQLILTNKPKLIY-VDPSK- 432 (489)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~k~~g~~-~k~r~~~lt~~p~l~y-~d~~~- 432 (489)
............. ......+. . . ....+.+.|++.|...-. ||+|+|.+.++..... .....
T Consensus 350 ~~~~~~~~~~~~~--~~~~~~~~------~-----~--v~sDv~~~G~l~k~~~~~~wk~ry~~l~~~~l~~~~~~~~~~ 414 (478)
T PTZ00267 350 EILRQLQESGERA--PPPSSIRY------G-----V--VTSDVTHGGYLYKYSSDMRWKKRYFYIGNGQLRISLSENPEN 414 (478)
T ss_pred HHHHHHhhccccC--CCCcceec------c-----e--ecCCcccceEEeccCCCcchhhheEEecCCceEEEecccccc
Confidence 0000000000000 00000000 0 0 012356789998877644 9999999987555543 32211
Q ss_pred -CeeeeeeeccCCCCceEE----EEcCCCcEEEEc--CCceEEEEcCCccHHHHHHHHHHhc
Q 011287 433 -LVVKGNIIWSDNSNDLSI----QVSSPSHFKIVT--PKKVLSFEDAKQRASQWKKAIEALQ 487 (489)
Q Consensus 433 -~~~kg~i~~~~~~~~~~~----~~~~~~~f~i~~--p~r~y~~~d~~~~~~~W~~~i~~~~ 487 (489)
......+.+.....+..+ ..+.++.|.|.| -.|+|+..+.+.++++|+++|++++
T Consensus 415 ~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 476 (478)
T PTZ00267 415 DGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFNNGQKIIAYAKTAEDRDQWISKFQRAC 476 (478)
T ss_pred CCCCCccccHHHhcccccccHHhcCCCCceEEEEecCCcEEEEecCChHHHHHHHHHHHHHh
Confidence 000011122111111222 335688999976 3477777788899999999999976
No 41
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=5.3e-50 Score=404.05 Aligned_cols=267 Identities=35% Similarity=0.619 Sum_probs=239.7
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHH---HhCCCCCccEEEEEEEcCCEEEEE
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVL---DQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il---~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
|++.+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.++ +.++||||+++++++.+...+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78999999999999999999999999999999876544444556677777665 456899999999999999999999
Q ss_pred EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|||++||+|..++.. +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~----- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF----- 154 (324)
T ss_pred EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC-----
Confidence 999999999988865 57999999999999999999999999999999999999999999999999998743211
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAAR 283 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 283 (489)
......++||+.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+....+..+......+|..+++.+.
T Consensus 155 -----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~ 229 (324)
T cd05589 155 -----GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAI 229 (324)
T ss_pred -----CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 123346789999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 284 DLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 284 ~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
+||.+||+.||.+||++.+..+.++++||||++++|..+..
T Consensus 230 ~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~ 270 (324)
T cd05589 230 SIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLA 270 (324)
T ss_pred HHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHh
Confidence 99999999999999998877889999999999999988654
No 42
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.2e-50 Score=405.67 Aligned_cols=264 Identities=38% Similarity=0.659 Sum_probs=239.0
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGG 130 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg 130 (489)
+.||+|+||.||+|++..+|+.||+|++.+...........+.+|..+++.++||||+++++.|.+...+|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 47999999999999999999999999998765544455566778999999999999999999999999999999999999
Q ss_pred ChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCC
Q 011287 131 ELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDD 210 (489)
Q Consensus 131 ~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~ 210 (489)
+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~----------~~ 150 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD----------GA 150 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC----------CC
Confidence 99999988888999999999999999999999999999999999999999999999999998743211 11
Q ss_pred CccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhh
Q 011287 211 KACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRLL 290 (489)
Q Consensus 211 ~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L 290 (489)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+......+|..+++++.+||.+||
T Consensus 151 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L 230 (323)
T cd05595 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 230 (323)
T ss_pred ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHc
Confidence 22356799999999999999999999999999999999999999999998888888888889999999999999999999
Q ss_pred ccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 291 DVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 291 ~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
+.||.+|++.......++++||||.+++|..+..
T Consensus 231 ~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~ 264 (323)
T cd05595 231 KKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQ 264 (323)
T ss_pred cCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 9999999977666779999999999999988654
No 43
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=5.2e-50 Score=413.31 Aligned_cols=280 Identities=38% Similarity=0.599 Sum_probs=236.8
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
.+|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++.|.+...+|+||
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence 36999999999999999999999999999999998765555566678889999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc--
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV-- 202 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~-- 202 (489)
|||++|+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++..+.......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~ 160 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence 999999999999988889999999999999999999999999999999999999999999999999986432110000
Q ss_pred c-----------------------------------CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHH
Q 011287 203 L-----------------------------------PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQ 247 (489)
Q Consensus 203 ~-----------------------------------~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilye 247 (489)
. ..........+.+||+.|+|||++.+..++.++|||||||++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (382)
T cd05625 161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 240 (382)
T ss_pred ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHH
Confidence 0 00000111235689999999999999999999999999999999
Q ss_pred HhhCCCCCCCCCHHHHHHHHHhc--CCCCC--CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCccccc
Q 011287 248 MLSGTSPFKDTSEWLIFQRIIAR--DIRFP--NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIR 323 (489)
Q Consensus 248 lltG~~PF~~~~~~~~~~~i~~~--~~~~p--~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~ 323 (489)
|++|++||.+.+..+...++... ...+| ..+++++.+||.+|+ .||.+|++. .+..++++||||++++|....
T Consensus 241 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~--~~~~ei~~hp~f~~~~~~~~~ 317 (382)
T cd05625 241 MLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGK--NGADEIKAHPFFKTIDFSSDL 317 (382)
T ss_pred HHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCC--CCHHHHhcCCCcCCcChHHHH
Confidence 99999999998888777777653 33444 357999999999986 599999984 245899999999999998754
Q ss_pred CCCC
Q 011287 324 GQTP 327 (489)
Q Consensus 324 ~~~~ 327 (489)
.+.+
T Consensus 318 ~~~~ 321 (382)
T cd05625 318 RQQS 321 (382)
T ss_pred hcCC
Confidence 4433
No 44
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=8e-50 Score=402.95 Aligned_cols=264 Identities=39% Similarity=0.671 Sum_probs=237.9
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGG 130 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg 130 (489)
+.||+|+||.||+|++..+|+.||+|++.+...........+..|..+++.++||||+++++.|.+...+|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 47999999999999999999999999998765555555566778999999999999999999999999999999999999
Q ss_pred ChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 131 ELFDQITSKGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 131 ~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
+|..++.+.+.+++..++.++.||+.||.|||+ .||+||||||+|||++.+|.+||+|||+++..... .
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~----------~ 150 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD----------G 150 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC----------C
Confidence 999999888889999999999999999999997 79999999999999999999999999998743211 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+......+|..+++++.+||++|
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~ 230 (325)
T cd05594 151 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGL 230 (325)
T ss_pred cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Confidence 12235679999999999999999999999999999999999999999999888888898889999999999999999999
Q ss_pred hccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 290 LDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 290 L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
|+.||++|++.......++++||||.++.|.....
T Consensus 231 L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~ 265 (325)
T cd05594 231 LKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYE 265 (325)
T ss_pred hhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 99999999976555669999999999999997654
No 45
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-51 Score=417.94 Aligned_cols=296 Identities=36% Similarity=0.586 Sum_probs=257.7
Q ss_pred cccccCCCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEE
Q 011287 32 SFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLF 111 (489)
Q Consensus 32 s~~~~~~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~ 111 (489)
|...+.-+.++...-|..++.||-|+||+|.+++..+|...||+|.+.|..+...+....++.|+.||...+.+-||+||
T Consensus 616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy 695 (1034)
T KOG0608|consen 616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY 695 (1034)
T ss_pred hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence 33455666788888899999999999999999999999999999999999888889999999999999999999999999
Q ss_pred EEEEcCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccC
Q 011287 112 FTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGS 191 (489)
Q Consensus 112 ~~~~~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~ 191 (489)
..|+|.+++||||+|++|||+..+|-+.|-|.|..+++|++++..|+++.|..|+|||||||.|||||.+|||||+|||+
T Consensus 696 ySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 696 YSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred EEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcc---------cc-----ccCCCC------------------CCCCccceecCCcCCChhhhcCCCCCCCCcch
Q 011287 192 VKPMQDSR---------IT-----VLPNAA------------------SDDKACTFVGTAAYVPPEVLNSSPATFGNDLW 239 (489)
Q Consensus 192 a~~~~~~~---------~~-----~~~~~~------------------~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiw 239 (489)
+.-+.-.. .. ...+++ ......+.+||+.|+|||+|....|+..+|+|
T Consensus 776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdww 855 (1034)
T KOG0608|consen 776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWW 855 (1034)
T ss_pred cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhh
Confidence 86542211 00 000001 11234567999999999999999999999999
Q ss_pred hhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc----CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 240 ALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR----DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 240 SLG~ilyelltG~~PF~~~~~~~~~~~i~~~----~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
|.|||||+|+.|++||.+.+..++..++.+- .+.....+++++.+||.++. .+++.|++-. +.++++.||||+
T Consensus 856 s~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkn--g~d~vKaHpfFk 932 (1034)
T KOG0608|consen 856 SVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKN--GADQVKAHPFFK 932 (1034)
T ss_pred HhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhccc--chhhhhcCcccc
Confidence 9999999999999999998888777676542 23344579999999999976 5899999874 457899999999
Q ss_pred CCCcccccCCCCCCC
Q 011287 316 GIDWKNIRGQTPPKL 330 (489)
Q Consensus 316 ~i~~~~~~~~~~p~~ 330 (489)
+|||.+++++..|.+
T Consensus 933 gIDfsslRkq~ApYI 947 (1034)
T KOG0608|consen 933 GIDFSSLRKQRAPYI 947 (1034)
T ss_pred ccchHhhhhccCCcC
Confidence 999999998877743
No 46
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-51 Score=404.16 Aligned_cols=269 Identities=39% Similarity=0.645 Sum_probs=232.6
Q ss_pred CCCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccch-----------hHHHHHHHHHHHHHhCCCC
Q 011287 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE-----------NKTAYVKLERIVLDQLDHP 105 (489)
Q Consensus 37 ~~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~-----------~~~~~~~~E~~il~~l~hp 105 (489)
.......++.|++++.||+|.||.|-+|++..+++.||||++.|....+. .-.+.+.+|+.+|++|.||
T Consensus 89 ~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~ 168 (576)
T KOG0585|consen 89 DDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHP 168 (576)
T ss_pred CcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCc
Confidence 33456678999999999999999999999999999999999987654432 2245789999999999999
Q ss_pred CccEEEEEEEcC--CEEEEEEeccCCCChHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC
Q 011287 106 GVVRLFFTFQDT--FSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG 182 (489)
Q Consensus 106 nIv~l~~~~~~~--~~lylV~E~~~gg~L~~~l~~~~~-l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g 182 (489)
|||+|+++..|. ..+|+|+|||..|.+...-.. +. +++.+++.|+..++.||+|||.+|||||||||+|+||+.+|
T Consensus 169 nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d-~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 169 NVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD-KPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred CeeEEEEeecCcccCceEEEEEeccCCccccCCCC-cccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCC
Confidence 999999999864 679999999999988553322 34 99999999999999999999999999999999999999999
Q ss_pred CEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCC----CCCCCcchhhhHHHHHHhhCCCCCCCC
Q 011287 183 HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP----ATFGNDLWALGCTLYQMLSGTSPFKDT 258 (489)
Q Consensus 183 ~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~----~~~~sDiwSLG~ilyelltG~~PF~~~ 258 (489)
++||+|||.+....... ....+......+|||.|+|||...+.. .+.+.|||||||+||.|+.|+.||-+.
T Consensus 248 ~VKIsDFGVs~~~~~~~-----~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~ 322 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGS-----DEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD 322 (576)
T ss_pred cEEeeccceeeecccCC-----ccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence 99999999988663321 111222333479999999999987632 467889999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCCC--CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 259 SEWLIFQRIIARDIRFPNY--FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 259 ~~~~~~~~i~~~~~~~p~~--~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
...+++.+|.+..+.||.. +.++++|||.+||++||++|++. .+++.|||...
T Consensus 323 ~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l-----~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 323 FELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITL-----PDIKLHPWVTR 377 (576)
T ss_pred hHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeeh-----hhheecceecc
Confidence 9999999999999999986 79999999999999999999998 88999999853
No 47
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-51 Score=390.47 Aligned_cols=284 Identities=36% Similarity=0.690 Sum_probs=261.0
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCC
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTF 118 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 118 (489)
..+.++||.++++||+|+|+.|.+++.++|.+.||+|+++|...........++.|..+.... +||++|.|+..|+.+.
T Consensus 245 ~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes 324 (593)
T KOG0695|consen 245 QGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES 324 (593)
T ss_pred cccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc
Confidence 457889999999999999999999999999999999999999888888888999999998776 7999999999999999
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.+++|.||++||+|.-++++..+++|+.+++|.++|+.||.|||++|||+||||..|+|++..||+||+|+|.++.-
T Consensus 325 rlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~--- 401 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG--- 401 (593)
T ss_pred eEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998742
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCC--------CCCHHHHHHHHHhc
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFK--------DTSEWLIFQRIIAR 270 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~--------~~~~~~~~~~i~~~ 270 (489)
.......++|||||.|.|||+|.+..|+..+|+|+|||+++||++|+.||. ..++.-++|-|+..
T Consensus 402 -------l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek 474 (593)
T KOG0695|consen 402 -------LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK 474 (593)
T ss_pred -------CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh
Confidence 223567789999999999999999999999999999999999999999995 23456688999999
Q ss_pred CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCC-CCHHHHhcCCCCCCCCcccccC-CCCCCCCCC
Q 011287 271 DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRG-QTPPKLASE 333 (489)
Q Consensus 271 ~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~-~~~~~l~~hpff~~i~~~~~~~-~~~p~~~~~ 333 (489)
...+|..++-.+..+++..|++||.+|+++.. .|+++++.|+||+.+||+.+.+ +..|++.|.
T Consensus 475 qiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~ 539 (593)
T KOG0695|consen 475 QIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQ 539 (593)
T ss_pred cccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCc
Confidence 99999999999999999999999999999875 7899999999999999999865 445555443
No 48
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=7.3e-50 Score=402.56 Aligned_cols=264 Identities=36% Similarity=0.628 Sum_probs=237.5
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
++||+|+||.||+|++..+++.||+|++.+..............|..++..+ +||||++++++|.+...+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4699999999999999999999999999876554555556667788888766 799999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|+++|+|||++...... .
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~----------~ 150 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN----------G 150 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC----------C
Confidence 999999998888999999999999999999999999999999999999999999999999998753221 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....++.+......+|..++.++.+||.+|
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~ 230 (321)
T cd05591 151 VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAF 230 (321)
T ss_pred ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence 22335679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCC--CCHHHHhcCCCCCCCCcccccC
Q 011287 290 LDVDPSGRPGAGP--GGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 290 L~~dP~~R~t~~~--~~~~~l~~hpff~~i~~~~~~~ 324 (489)
|+.||++|+++.. ....++++||||.+++|..+..
T Consensus 231 L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~ 267 (321)
T cd05591 231 MTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQ 267 (321)
T ss_pred hccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHh
Confidence 9999999997654 2679999999999999998754
No 49
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=9.4e-50 Score=410.44 Aligned_cols=277 Identities=37% Similarity=0.614 Sum_probs=234.1
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
.+|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|+.++||||+++++.|.+...+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 48999999999999999999999999999999997765444555677888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc--
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV-- 202 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~-- 202 (489)
|||++|+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+++++|+|||+|..+.......
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~ 160 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence 999999999999988889999999999999999999999999999999999999999999999999986432110000
Q ss_pred -----------cC-C-------------------CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhC
Q 011287 203 -----------LP-N-------------------AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSG 251 (489)
Q Consensus 203 -----------~~-~-------------------~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG 251 (489)
.. . .........++||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G 240 (376)
T cd05598 161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 240 (376)
T ss_pred ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence 00 0 0000112356899999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhcC--CCCC--CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 252 TSPFKDTSEWLIFQRIIARD--IRFP--NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 252 ~~PF~~~~~~~~~~~i~~~~--~~~p--~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
+.||.+.+..+....+.... +.+| ..+++++.+||.+|+ .+|.+|++.. ++.++++||||++++|..+..
T Consensus 241 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~--t~~ell~h~~~~~~~~~~~~~ 314 (376)
T cd05598 241 QPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKN--GADEIKAHPFFKGIDFASLIR 314 (376)
T ss_pred CCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCC--CHHHHhCCCCcCCCCHHHHhh
Confidence 99999988877776665432 3333 358999999999977 5999999431 338999999999999988753
No 50
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.5e-50 Score=408.17 Aligned_cols=278 Identities=44% Similarity=0.753 Sum_probs=242.1
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|.+++.||+|+||+||+|++..+|+.||||++.+...........+..|+.++..++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 48999999999999999999999999999999998765555456677888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++|+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++..+.........
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY 160 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999999866443200000
Q ss_pred -------------------CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHH
Q 011287 205 -------------------NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQ 265 (489)
Q Consensus 205 -------------------~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~ 265 (489)
...........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~ 240 (350)
T cd05573 161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYN 240 (350)
T ss_pred ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHH
Confidence 0000122345689999999999999999999999999999999999999999999888888
Q ss_pred HHHh--cCCCCCCC--CCHHHHHHHHHhhccCCCCCCC-CCCCCHHHHhcCCCCCCCCcccccCCCCC
Q 011287 266 RIIA--RDIRFPNY--FSDAARDLIDRLLDVDPSGRPG-AGPGGYAVLKMHPFFKGIDWKNIRGQTPP 328 (489)
Q Consensus 266 ~i~~--~~~~~p~~--~~~~~~~Li~~~L~~dP~~R~t-~~~~~~~~l~~hpff~~i~~~~~~~~~~p 328 (489)
++.. ....+|.. +++++.+||.+||. ||.+|++ + +++++||||++++|.......+|
T Consensus 241 ~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~-----~~ll~hp~~~~~~~~~~~~~~~~ 302 (350)
T cd05573 241 KIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSF-----EEIKSHPFFKGIDWENLRETKPP 302 (350)
T ss_pred HHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCH-----HHHhcCCCcCCCCHHHHhhCCCC
Confidence 8877 55556654 59999999999997 9999999 7 89999999999999987744433
No 51
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=9.4e-50 Score=403.30 Aligned_cols=264 Identities=36% Similarity=0.700 Sum_probs=234.0
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
++||+|+||.||+|++..+++.||+|++.+...........+..|..++..+ +||||++++++|.+...+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4799999999999999999999999999877655555666788899999888 799999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.... ..
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~----------~~ 150 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR----------PG 150 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc----------CC
Confidence 99999998888999999999999999999999999999999999999999999999999999874211 11
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCC---------CHHHHHHHHHhcCCCCCCCCCH
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDT---------SEWLIFQRIIARDIRFPNYFSD 280 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~---------~~~~~~~~i~~~~~~~p~~~~~ 280 (489)
......+||+.|+|||++.+..++.++|+|||||++|+|++|+.||... ......+.+......+|..++.
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 230 (329)
T cd05588 151 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSV 230 (329)
T ss_pred CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCH
Confidence 2334578999999999999999999999999999999999999999631 2234566778888889999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCC-CCHHHHhcCCCCCCCCcccccC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~-~~~~~l~~hpff~~i~~~~~~~ 324 (489)
++.+||.+||+.||.+|+++.. .+++++++||||..++|..+..
T Consensus 231 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~ 275 (329)
T cd05588 231 KASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQ 275 (329)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHh
Confidence 9999999999999999999743 4679999999999999988754
No 52
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-52 Score=384.75 Aligned_cols=256 Identities=33% Similarity=0.593 Sum_probs=234.8
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
-+.|++-++||+|.|+.|+++.++.||+.||+|+++....... ..+.+.+|+.+-+.|+|||||+|++++......|+|
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 4679999999999999999999999999999999986655544 567799999999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC---CCEEEeeccCccccCCccc
Q 011287 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD---GHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~---g~ikL~DFG~a~~~~~~~~ 200 (489)
+|+++|++|..-|-+.--++|..+-.++.||++||.|||.+||||||+||+|+++-.. .-+||+|||+|..+..
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~--- 165 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND--- 165 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC---
Confidence 9999999998877766678999999999999999999999999999999999999643 3599999999987652
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCC----
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN---- 276 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~---- 276 (489)
......++|||.|||||++...+|+..+||||.|||||-||.|++||.+.+...+++.|.++.+.+|.
T Consensus 166 --------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~ 237 (355)
T KOG0033|consen 166 --------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWD 237 (355)
T ss_pred --------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccC
Confidence 34456789999999999999999999999999999999999999999999999999999999998875
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.+++++++||++||..||.+|+|+ .|.++|||..+
T Consensus 238 ~is~~Ak~LvrrML~~dP~kRIta-----~EAL~HpWi~~ 272 (355)
T KOG0033|consen 238 TVTPEAKSLIRRMLTVNPKKRITA-----DEALKHPWICN 272 (355)
T ss_pred cCCHHHHHHHHHHhccChhhhccH-----HHHhCCchhcc
Confidence 589999999999999999999999 88999999975
No 53
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2.3e-49 Score=399.22 Aligned_cols=263 Identities=38% Similarity=0.677 Sum_probs=234.2
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHH-HHHhCCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI-VLDQLDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+.||+|+||+||+|++..+|+.||+|++.+...........+..|.. +++.++||||+++++.+.+...+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 47999999999999999999999999998764443333444444554 56789999999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++..... .
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~----------~ 150 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH----------S 150 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC----------C
Confidence 999999998889999999999999999999999999999999999999999999999999998743211 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+++..+......++..+++.+.+||++|
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~ 230 (323)
T cd05575 151 KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGL 230 (323)
T ss_pred CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence 22335689999999999999999999999999999999999999999999999999999988888889999999999999
Q ss_pred hccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 290 LDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 290 L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
|+.||.+||++.+ .+.++++||||..++|..+..
T Consensus 231 l~~~p~~R~~~~~-~~~~il~~~~~~~~~~~~~~~ 264 (323)
T cd05575 231 LQKDRTKRLGAKD-DFLEIKNHVFFSSINWDDLVN 264 (323)
T ss_pred hhcCHHhCCCCCC-CHHHHHcCCCcCCCCHHHHhh
Confidence 9999999999863 678999999999999988754
No 54
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.3e-49 Score=400.86 Aligned_cols=266 Identities=39% Similarity=0.674 Sum_probs=237.1
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++++.||+|+||.||+|++..+++.||+|++.+...........+..|+.++..++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998765554555667888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||++||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT------- 153 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-------
Confidence 9999999999999888899999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--CCCCC------
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD--IRFPN------ 276 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~--~~~p~------ 276 (489)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+.... ...|.
T Consensus 154 ------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 227 (333)
T cd05600 154 ------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRF 227 (333)
T ss_pred ------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCcccc
Confidence 2235679999999999999999999999999999999999999999988888777765432 22222
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQTPP 328 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~p 328 (489)
.+++++.+||.+||..+|.+||++ .++++||||.+++|..+....||
T Consensus 228 ~~s~~~~~li~~~l~~~~~rr~s~-----~~ll~h~~~~~~~~~~~~~~~~~ 274 (333)
T cd05600 228 NLSDEAWDLITKLINDPSRRFGSL-----EDIKNHPFFKEVDWNELRELKPP 274 (333)
T ss_pred ccCHHHHHHHHHHhhChhhhcCCH-----HHHHhCcccCCCCHHHHhhCCCC
Confidence 458999999999999999999998 89999999999999988744443
No 55
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-49 Score=401.61 Aligned_cols=269 Identities=36% Similarity=0.658 Sum_probs=236.2
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+.+++.++||||+++++.+.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47999999999999999999999999999999998765544555667888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||+++|+|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++..+....
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~---- 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK---- 156 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC----
Confidence 999999999999876 679999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCCCccceecCCcCCChhhhc------CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--CCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLN------SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD--IRFP 275 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~------~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~--~~~p 275 (489)
.......+||+.|+|||++. ...++.++|||||||++|+|++|+.||...+....+.++.... ..+|
T Consensus 157 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~ 231 (330)
T cd05601 157 -----MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFP 231 (330)
T ss_pred -----ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCC
Confidence 11122347999999999986 4557889999999999999999999999988888888776532 3445
Q ss_pred C--CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCCCC
Q 011287 276 N--YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQTPP 328 (489)
Q Consensus 276 ~--~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~p 328 (489)
. .+++++.+||++||+ ||.+||++ +++++||||..++|..+....||
T Consensus 232 ~~~~~~~~~~~li~~ll~-~p~~R~t~-----~~l~~h~~~~~~~~~~~~~~~~~ 280 (330)
T cd05601 232 EDPKVSSDFLDLIQSLLC-GQKERLGY-----EGLCCHPFFSKIDWNNIRNSLPP 280 (330)
T ss_pred CCCCCCHHHHHHHHHHcc-ChhhCCCH-----HHHhCCCCcCCCCHHHHhhCCCC
Confidence 4 579999999999998 99999998 89999999999999988764444
No 56
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.9e-49 Score=401.19 Aligned_cols=264 Identities=36% Similarity=0.707 Sum_probs=233.0
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|..++..+ +||||+++++++.+...+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4799999999999999999999999999877555555566777888888776 899999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++++||+|||+++..... .
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~----------~ 150 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP----------G 150 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC----------C
Confidence 999999988888999999999999999999999999999999999999999999999999998743211 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCC---------CCHHHHHHHHHhcCCCCCCCCCH
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD---------TSEWLIFQRIIARDIRFPNYFSD 280 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~---------~~~~~~~~~i~~~~~~~p~~~~~ 280 (489)
.....++||+.|+|||++.+..++.++|+|||||++|+|++|+.||.. .......+.+......+|..++.
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~ 230 (329)
T cd05618 151 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV 230 (329)
T ss_pred CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCH
Confidence 223456899999999999999999999999999999999999999952 22334566777888899999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCC-CCHHHHhcCCCCCCCCcccccC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~-~~~~~l~~hpff~~i~~~~~~~ 324 (489)
.+.+||++||+.||++||++.. .+++++++||||++++|+.+..
T Consensus 231 ~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~ 275 (329)
T cd05618 231 KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQ 275 (329)
T ss_pred HHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHc
Confidence 9999999999999999999753 5689999999999999987654
No 57
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.1e-49 Score=398.45 Aligned_cols=261 Identities=38% Similarity=0.717 Sum_probs=232.6
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHh-CCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ-LDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+.||+|+||.||+|++..+++.||+|++.+..............|..++.. .+||||+++++++.+...+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 479999999999999999999999999987654444445555667777765 4899999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... .
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~----------~ 150 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNG----------E 150 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCC----------C
Confidence 999999988889999999999999999999999999999999999999999999999999998754221 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...++..+......+|..++.++.+||.+|
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~ 230 (316)
T cd05592 151 GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKL 230 (316)
T ss_pred CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence 23345689999999999999999999999999999999999999999999998988888888889999999999999999
Q ss_pred hccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 290 LDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 290 L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
|+.||++||++. .+++.||||..++|..+...
T Consensus 231 l~~~P~~R~~~~----~~l~~h~~~~~~~~~~~~~~ 262 (316)
T cd05592 231 FERDPTKRLGVD----GDIRQHPFFRGIDWERLEKR 262 (316)
T ss_pred ccCCHHHcCCCh----HHHHcCcccCCCCHHHHHhC
Confidence 999999999873 57999999999999887544
No 58
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.3e-49 Score=397.05 Aligned_cols=260 Identities=36% Similarity=0.675 Sum_probs=231.7
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHh-CCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ-LDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+.||+|+||.||+|+++.+|+.||+|++.+..............|..++.. ++||||++++++|.+...+|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 479999999999999999999999999987644333444556667777765 4899999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.... ..
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~----------~~ 150 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF----------GD 150 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc----------CC
Confidence 99999999888899999999999999999999999999999999999999999999999999864221 11
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+......+|..++.++++||++|
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 230 (316)
T cd05620 151 NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKL 230 (316)
T ss_pred CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHH
Confidence 22345789999999999999999999999999999999999999999999988888888888889999999999999999
Q ss_pred hccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 290 LDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 290 L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
|+.||++||++. +++++||||.+++|..+..
T Consensus 231 l~~dP~~R~~~~----~~~~~h~~f~~~~~~~~~~ 261 (316)
T cd05620 231 FERDPTRRLGVV----GNIRGHPFFKTINWTALEK 261 (316)
T ss_pred ccCCHHHcCCCh----HHHHcCCCcCCCCHHHHHh
Confidence 999999999983 5799999999999987654
No 59
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=5.5e-49 Score=395.75 Aligned_cols=264 Identities=38% Similarity=0.682 Sum_probs=238.9
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|..+++.+ +||||+++++++.+...+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4799999999999999999999999999876555555556677788888887 799999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++..... .
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------~ 150 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG----------G 150 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC----------C
Confidence 999999998889999999999999999999999999999999999999999999999999998642211 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
......+||+.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+....+..+......+|..++.++.+||++|
T Consensus 151 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~ 230 (318)
T cd05570 151 VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSF 230 (318)
T ss_pred CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHH
Confidence 22335689999999999999999999999999999999999999999999988889999888899999999999999999
Q ss_pred hccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 290 LDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 290 L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
|+.||++||++.+....+++.||||..++|.....
T Consensus 231 l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~ 265 (318)
T cd05570 231 LTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLER 265 (318)
T ss_pred ccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHh
Confidence 99999999999777789999999999999987654
No 60
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=4.8e-49 Score=397.79 Aligned_cols=265 Identities=36% Similarity=0.705 Sum_probs=235.1
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|..++.++ +||||++++++|.+...+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4799999999999999999999999999877555555667788899998888 699999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++..... .
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~----------~ 150 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP----------G 150 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC----------C
Confidence 999999988888999999999999999999999999999999999999999999999999998743211 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCC-------CCHHHHHHHHHhcCCCCCCCCCHHH
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD-------TSEWLIFQRIIARDIRFPNYFSDAA 282 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~-------~~~~~~~~~i~~~~~~~p~~~~~~~ 282 (489)
......+||+.|+|||++.+..++.++|+|||||++|+|++|..||.. ......++.+......+|..++..+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 230 (327)
T cd05617 151 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKA 230 (327)
T ss_pred CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHH
Confidence 223457899999999999999999999999999999999999999953 2234566777777888999999999
Q ss_pred HHHHHHhhccCCCCCCCCCC-CCHHHHhcCCCCCCCCcccccCC
Q 011287 283 RDLIDRLLDVDPSGRPGAGP-GGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 283 ~~Li~~~L~~dP~~R~t~~~-~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
.++|.+||+.||.+|+++.. .++.++++||||.+++|+.+...
T Consensus 231 ~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~ 274 (327)
T cd05617 231 SHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKK 274 (327)
T ss_pred HHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhC
Confidence 99999999999999999854 57899999999999999987654
No 61
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.3e-49 Score=397.64 Aligned_cols=264 Identities=35% Similarity=0.649 Sum_probs=234.4
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHH-HHHhCCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI-VLDQLDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+.||+|+||+||+|++..+|+.||+|++.+...........+..|.. +++.++||||+++++++.+...+|+||||+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999999999999999998764433334444555554 56779999999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++..... .
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~----------~ 150 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ----------S 150 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC----------C
Confidence 999999998889999999999999999999999999999999999999999999999999998743211 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..++++.+......++...+..+.++|++|
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l 230 (325)
T cd05604 151 DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEEL 230 (325)
T ss_pred CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHH
Confidence 22345689999999999999999999999999999999999999999999999999999888888888999999999999
Q ss_pred hccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 290 LDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 290 L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
|+.||.+||++.+ .+.+++.||||.+++|..+...
T Consensus 231 l~~~p~~R~~~~~-~~~~i~~h~~f~~~~~~~~~~~ 265 (325)
T cd05604 231 LEKDRQRRLGAKE-DFLEIQEHPFFESLSWTDLEQK 265 (325)
T ss_pred hccCHHhcCCCCC-CHHHHhcCCCcCCCCHHHHHhC
Confidence 9999999999864 5789999999999999887654
No 62
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.5e-51 Score=395.22 Aligned_cols=257 Identities=32% Similarity=0.542 Sum_probs=241.8
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEE
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~l 120 (489)
.....+|++.+.||+|.||.|-+|.+...|+.||||.+.|..+..++....+.+|+++|..|+||||+++|++|+..+.+
T Consensus 49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI 128 (668)
T KOG0611|consen 49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI 128 (668)
T ss_pred cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE
Confidence 33457999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
.+||||+.+|+|.+|+.+.+.++|.+++.++.||+.|+.|||.++++|||||.+|||+|+|+++||+|||++-.+...
T Consensus 129 vivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~-- 206 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK-- 206 (668)
T ss_pred EEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999776543
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCC-CCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPA-TFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFS 279 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~ 279 (489)
....+|||++.|.+||++++.+| ++.+|-||||++||-|+.|..||.+.+...+...|..+.+.=|.. |
T Consensus 207 ---------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~-P 276 (668)
T KOG0611|consen 207 ---------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPET-P 276 (668)
T ss_pred ---------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCC-C
Confidence 34568999999999999999998 678999999999999999999999999999999999998877664 7
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.++.-||+.||-.||++|.|+ .++-.|-|.
T Consensus 277 SdA~gLIRwmLmVNP~RRATi-----eDiAsHWWv 306 (668)
T KOG0611|consen 277 SDASGLIRWMLMVNPERRATI-----EDIASHWWV 306 (668)
T ss_pred chHHHHHHHHHhcCcccchhH-----HHHhhhhee
Confidence 789999999999999999988 889999886
No 63
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=8.6e-49 Score=394.66 Aligned_cols=263 Identities=38% Similarity=0.670 Sum_probs=233.5
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHH-HHHhCCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI-VLDQLDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
++||+|+||.||+|++..+|+.||+|++.+...........+..|.. +++.++||||++++++|.+...+|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999999999999999998765444334444444544 67889999999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|...+.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++..... .
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----------~ 150 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP----------E 150 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC----------C
Confidence 999999988888999999999999999999999999999999999999999999999999998743211 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+....+..+......+|...+.++.++|.+|
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~ 230 (321)
T cd05603 151 ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGL 230 (321)
T ss_pred CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Confidence 22345689999999999999899999999999999999999999999999888899999888899999999999999999
Q ss_pred hccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 290 LDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 290 L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
|+.||.+|+++.. .+.++++|+||..++|..+..
T Consensus 231 l~~~p~~R~~~~~-~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T cd05603 231 LHKDQRRRLGAKA-DFLEIKNHVFFSPINWDDLYH 264 (321)
T ss_pred ccCCHhhcCCCCC-CHHHHhCCCCcCCCCHHHHhc
Confidence 9999999999753 477999999999999998754
No 64
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7e-49 Score=397.00 Aligned_cols=270 Identities=38% Similarity=0.734 Sum_probs=234.7
Q ss_pred CeEEeeEEeeeCceEEEEEEEc---CCCcEEEEEEeeccccc-chhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFIT-KENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~---~tg~~vAiK~~~k~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~l 120 (489)
+|++++.||+|+||.||+|++. .+++.||+|++.+.... .......+..|+.+++.+ +||||++++++|.+...+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 6999999999999999999874 57899999999765332 233445677899999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
|+||||+++|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.+....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~- 159 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE- 159 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC-
Confidence 9999999999999999888889999999999999999999999999999999999999999999999999987643221
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCC----CHHHHHHHHHhcCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDT----SEWLIFQRIIARDIRFP 275 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~----~~~~~~~~i~~~~~~~p 275 (489)
......++||+.|+|||++.+. .++.++|||||||++|+|++|..||... ........+......+|
T Consensus 160 --------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd05614 160 --------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFP 231 (332)
T ss_pred --------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 1223456899999999999865 4788999999999999999999999643 34455566777788889
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
..+++.+.+||.+||+.||++||++.....+++++||||++.+|..+..
T Consensus 232 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~ 280 (332)
T cd05614 232 SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALAL 280 (332)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHh
Confidence 9999999999999999999999988766779999999999999988754
No 65
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-50 Score=395.43 Aligned_cols=259 Identities=33% Similarity=0.583 Sum_probs=222.8
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC--EEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF--SLY 121 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~--~ly 121 (489)
..++..++.||+|+||.||++.+.++|..+|||.+.... ....+.+.+|+.+|++++|||||++++...... .++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 567999999999999999999999999999999987652 122667889999999999999999999754444 699
Q ss_pred EEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC-CCCEEEeeccCccccCCcc
Q 011287 122 MALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA-DGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~-~g~ikL~DFG~a~~~~~~~ 199 (489)
+.|||+++|+|.+++.+.+ .|++..++.|..||+.||+|||++||+||||||+||||+. +|.+||+|||+++......
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999999999987 7999999999999999999999999999999999999999 7999999999998765311
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCC-CCHHHHHHHHHhcC--CCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKD-TSEWLIFQRIIARD--IRFP 275 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~-~~~~~~~~~i~~~~--~~~p 275 (489)
........+.||+.|||||++..+ ....++|||||||++.||+||.+||.. .......-.|.... +.+|
T Consensus 173 -------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip 245 (313)
T KOG0198|consen 173 -------TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIP 245 (313)
T ss_pred -------ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCC
Confidence 112334568999999999999863 344699999999999999999999987 34444444444333 6789
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
..+++++++||.+||..||++|||| .++++|||....
T Consensus 246 ~~ls~~a~~Fl~~C~~~~p~~Rpta-----~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 246 DSLSDEAKDFLRKCFKRDPEKRPTA-----EELLEHPFLKQN 282 (313)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCH-----HHHhhChhhhcc
Confidence 9999999999999999999999999 899999999753
No 66
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=9.4e-49 Score=394.91 Aligned_cols=265 Identities=40% Similarity=0.736 Sum_probs=236.3
Q ss_pred eeEEeeeCceEEEEEEEc---CCCcEEEEEEeecccccc-hhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 50 GKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFITK-ENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~---~tg~~vAiK~~~k~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
++.||+|+||.||+|++. .+++.||+|++.+..... ......+..|+.+++.++||||+++++.|.++..+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 368999999999999874 578999999997654322 2334556789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 126 SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
|+++|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------- 153 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE------- 153 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-------
Confidence 9999999999998889999999999999999999999999999999999999999999999999998743221
Q ss_pred CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDL 285 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~L 285 (489)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..+++++.+|
T Consensus 154 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (323)
T cd05584 154 ---GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDL 230 (323)
T ss_pred ---CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 12223467999999999999988999999999999999999999999999998889999999999999999999999
Q ss_pred HHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 286 IDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 286 i~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
|.+||+.||++||++......+++.||||...+|..+..
T Consensus 231 i~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~~ 269 (323)
T cd05584 231 LKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLA 269 (323)
T ss_pred HHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHhc
Confidence 999999999999976666779999999999999988754
No 67
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-49 Score=403.12 Aligned_cols=258 Identities=40% Similarity=0.696 Sum_probs=239.4
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCCEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ly 121 (489)
....|++++.||+|.||.||.|+++.||+.||+|++.|...........+.+|+.+|+.+. |||||.++++|++...+|
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3457999999999999999999999999999999999987776667788999999999998 999999999999999999
Q ss_pred EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC----CCEEEeeccCccccCC
Q 011287 122 MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD----GHIKIADFGSVKPMQD 197 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~----g~ikL~DFG~a~~~~~ 197 (489)
+|||+|.||+|++.|.+. .++|..+..++.|++.|+.|||+.||+||||||||+|+... +.+|++|||+|.....
T Consensus 113 lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~ 191 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP 191 (382)
T ss_pred EEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence 999999999999999887 49999999999999999999999999999999999999643 5799999999997643
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCC-
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN- 276 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~- 276 (489)
.......+||+.|+|||++...+|+..+||||+|||+|.|++|.+||.+.++...+.+|..+.+.|+.
T Consensus 192 -----------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~ 260 (382)
T KOG0032|consen 192 -----------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSE 260 (382)
T ss_pred -----------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCC
Confidence 34566889999999999999999999999999999999999999999999999999999999988864
Q ss_pred ---CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 277 ---YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 277 ---~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.++..+++||++||..||.+|+++ +++++|||+++.
T Consensus 261 ~w~~is~~akd~i~~ll~~dp~~R~ta-----~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 261 PWDDISESAKDFIRKLLEFDPRKRLTA-----AQALQHPWIKSI 299 (382)
T ss_pred CccccCHHHHHHHHHhcccCcccCCCH-----HHHhcCccccCC
Confidence 479999999999999999999999 889999998764
No 68
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.1e-49 Score=397.11 Aligned_cols=264 Identities=36% Similarity=0.674 Sum_probs=233.6
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHH-HHHHhCCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLER-IVLDQLDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~-~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+.||+|+||+||+|++..+++.||+|++.+...........+..|. .+++.++||||+++++++.+...+|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 4799999999999999999999999999875443333333344444 457889999999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.++|+|||+++..... .
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~----------~ 150 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH----------N 150 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC----------C
Confidence 999999998888999999999999999999999999999999999999999999999999998753221 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
.....++||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+......++..+++.+.+||++|
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~ 230 (325)
T cd05602 151 GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGL 230 (325)
T ss_pred CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHH
Confidence 22345689999999999999999999999999999999999999999999999999998888888889999999999999
Q ss_pred hccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 290 LDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 290 L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
|+.||.+|+++.+ .+.++++|+||..++|+.+...
T Consensus 231 l~~~p~~R~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 265 (325)
T cd05602 231 LQKDRTKRLGAKD-DFMEIKNHIFFSPINWDDLINK 265 (325)
T ss_pred cccCHHHCCCCCC-CHHHHhcCcccCCCCHHHHHhC
Confidence 9999999999864 5789999999999999987543
No 69
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.1e-49 Score=369.71 Aligned_cols=255 Identities=31% Similarity=0.456 Sum_probs=223.5
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|...+.||+|.||.||+|++.+||+.||||.++... .++.......+|+..|+.++|+||+.|.++|.....+.+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~-~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGN-AKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccc-cccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 57899999999999999999999999999999997663 33344556778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||++. +|...|+.. -.++...++.|+.+++.||+|||++.|+||||||+|+||+.+|.+||+|||+|+.+....
T Consensus 81 Efm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~---- 155 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN---- 155 (318)
T ss_pred Eeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCC----
Confidence 99986 999988765 459999999999999999999999999999999999999999999999999999876543
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-----------
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD----------- 271 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~----------- 271 (489)
......|-|.+|+|||+|.+. .|+..+|+||.|||+.||+.|.+.|.|.++.+++..|...-
T Consensus 156 ------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~ 229 (318)
T KOG0659|consen 156 ------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEM 229 (318)
T ss_pred ------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccc
Confidence 222233899999999998765 59999999999999999999999999999999998887510
Q ss_pred --------CC-CC--------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 272 --------IR-FP--------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 272 --------~~-~p--------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
+. +| ...++++.||+.+||..||.+|+++ .++++|+||+.
T Consensus 230 ~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita-----~qaL~~~yf~~ 286 (318)
T KOG0659|consen 230 TSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITA-----SQALKHPYFKS 286 (318)
T ss_pred cccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccH-----HHHhcchhhhc
Confidence 00 11 1247888999999999999999999 88999999985
No 70
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.1e-48 Score=393.32 Aligned_cols=260 Identities=36% Similarity=0.658 Sum_probs=231.0
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHh-CCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ-LDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+.||+|+||.||+|++..+++.||+|++.+..............|..++.. ++||||+++++++.+...+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 479999999999999999999999999987644333444555667777775 4899999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++..... .
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~----------~ 150 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG----------D 150 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC----------C
Confidence 999999988888999999999999999999999999999999999999999999999999998743211 1
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
......+||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+....++.+......+|..++.++++||.+|
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~ 230 (316)
T cd05619 151 AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKL 230 (316)
T ss_pred CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHH
Confidence 22345689999999999999999999999999999999999999999999888888888877888889999999999999
Q ss_pred hccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 290 LDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 290 L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
|+.||++||++. .+++.||||+.++|..+..
T Consensus 231 l~~~P~~R~~~~----~~l~~h~~~~~~~~~~~~~ 261 (316)
T cd05619 231 FVREPERRLGVK----GDIRQHPFFREIDWSALEE 261 (316)
T ss_pred hccCHhhcCCCh----HHHHcCcccCCCCHHHHHh
Confidence 999999999983 4899999999999987754
No 71
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4e-49 Score=419.26 Aligned_cols=265 Identities=28% Similarity=0.456 Sum_probs=229.7
Q ss_pred CCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 38 ~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
+......++|++.+.||+|+||+||+|++..+|+.||||++...... +.....+.+|+.++..++|+||++++..+...
T Consensus 25 ~~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~ 103 (496)
T PTZ00283 25 ATAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKK 103 (496)
T ss_pred ccccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceecc
Confidence 33445568999999999999999999999999999999999776443 33445677899999999999999998877533
Q ss_pred C--------EEEEEEeccCCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEE
Q 011287 118 F--------SLYMALESCEGGELFDQITSK----GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIK 185 (489)
Q Consensus 118 ~--------~lylV~E~~~gg~L~~~l~~~----~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ik 185 (489)
. .+++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||++.++++|
T Consensus 104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEE
Confidence 2 478999999999999988653 4699999999999999999999999999999999999999999999
Q ss_pred EeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHH
Q 011287 186 IADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQ 265 (489)
Q Consensus 186 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~ 265 (489)
|+|||+++.+.... ........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.
T Consensus 184 L~DFGls~~~~~~~--------~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~ 255 (496)
T PTZ00283 184 LGDFGFSKMYAATV--------SDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMH 255 (496)
T ss_pred EEecccCeeccccc--------cccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 99999998654321 1122346789999999999999999999999999999999999999999998888888
Q ss_pred HHHhcCC-CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 266 RIIARDI-RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 266 ~i~~~~~-~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
++..... .+|..+++++.+||.+||+.||.+||++ .++++|||++.
T Consensus 256 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~-----~ell~~p~~~~ 302 (496)
T PTZ00283 256 KTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSS-----SKLLNMPICKL 302 (496)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCH-----HHHHhCHHHHH
Confidence 8776554 4778899999999999999999999998 89999999875
No 72
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=5.3e-49 Score=395.64 Aligned_cols=264 Identities=37% Similarity=0.720 Sum_probs=236.7
Q ss_pred eeEEeeeCceEEEEEEE---cCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEec
Q 011287 50 GKIYGVGSYSKVVRAKK---IDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALES 126 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~---~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~ 126 (489)
++.||+|+||.||++++ ..+|+.||+|++.+..... .......+|+.++++++||||++++++|.+...+|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV-RDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence 36799999999999987 3679999999997654322 2234466799999999999999999999999999999999
Q ss_pred cCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCC
Q 011287 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNA 206 (489)
Q Consensus 127 ~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~ 206 (489)
+++|+|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-------- 151 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-------- 151 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC--------
Confidence 999999999988888999999999999999999999999999999999999999999999999998754321
Q ss_pred CCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 011287 207 ASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLI 286 (489)
Q Consensus 207 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li 286 (489)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+......+|..+++.+.+||
T Consensus 152 --~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li 229 (318)
T cd05582 152 --EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLL 229 (318)
T ss_pred --CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 122335689999999999999889999999999999999999999999999888888898888899999999999999
Q ss_pred HHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 287 DRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 287 ~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
++||+.||++||++.+..+.+++.||||..++|..+..
T Consensus 230 ~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T cd05582 230 RALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYR 267 (318)
T ss_pred HHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHh
Confidence 99999999999999877789999999999999988754
No 73
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=8.8e-49 Score=402.62 Aligned_cols=267 Identities=37% Similarity=0.624 Sum_probs=234.5
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
..+..++|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+...
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~ 117 (370)
T cd05596 38 LRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY 117 (370)
T ss_pred CCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 35678899999999999999999999999999999999976544444455667789999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+|+|||||+||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++..+....
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~ 196 (370)
T cd05596 118 LYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG 196 (370)
T ss_pred EEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999999998876 469999999999999999999999999999999999999999999999999987653221
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCC----CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--CC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSS----PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD--IR 273 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~----~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~--~~ 273 (489)
.......+||+.|+|||++.+. .++.++|+|||||++|+|++|++||.+.+....+.+|.... +.
T Consensus 197 ---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~ 267 (370)
T cd05596 197 ---------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLT 267 (370)
T ss_pred ---------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC
Confidence 1122356899999999998653 37889999999999999999999999999888888887643 55
Q ss_pred CCC--CCCHHHHHHHHHhhccCCCC--CCCCCCCCHHHHhcCCCCCCCCccc
Q 011287 274 FPN--YFSDAARDLIDRLLDVDPSG--RPGAGPGGYAVLKMHPFFKGIDWKN 321 (489)
Q Consensus 274 ~p~--~~~~~~~~Li~~~L~~dP~~--R~t~~~~~~~~l~~hpff~~i~~~~ 321 (489)
+|. .++.++++||.+||+.+|.+ |+++ +++++||||++.+|..
T Consensus 268 ~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~-----~ell~h~~~~~~~~~~ 314 (370)
T cd05596 268 FPDDIEISKQAKDLICAFLTDREVRLGRNGV-----DEIKSHPFFKNDQWTF 314 (370)
T ss_pred CCCcCCCCHHHHHHHHHHccChhhccCCCCH-----HHHhcCcccCCCChhh
Confidence 666 47999999999999999987 8888 8999999999988864
No 74
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.7e-49 Score=378.46 Aligned_cols=259 Identities=27% Similarity=0.388 Sum_probs=226.0
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEE--cCCE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQ--DTFS 119 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~ 119 (489)
.++++|+.+..|++|+||.||+|+++.|++.||+|.++-.. .++..--.-.+|+.+|.+++|||||.+-.+.. +-+.
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~ 151 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDK 151 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccce
Confidence 35778999999999999999999999999999999986543 33444445567999999999999999988775 3467
Q ss_pred EEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 120 LYMALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
+|+|||||+. ||..++...+ +|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+.+..+
T Consensus 152 iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 152 IYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 9999999987 9999998875 8999999999999999999999999999999999999999999999999999987654
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCC-CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-------
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSP-ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR------- 270 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~------- 270 (489)
. ......+-|.+|+|||+|.+.. |+.+.|+||+|||+.||+++++.|.+.++.+++.+|...
T Consensus 231 ~----------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~ 300 (419)
T KOG0663|consen 231 L----------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEA 300 (419)
T ss_pred c----------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccc
Confidence 2 2344678999999999998755 999999999999999999999999999999999998761
Q ss_pred ------------CCCCC------------CC-CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 271 ------------DIRFP------------NY-FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 271 ------------~~~~p------------~~-~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
...|+ .. ++....+|+..+|..||.+|.|| .+.++|+||...
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA-----~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITA-----EDGLKHEYFRET 367 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccH-----HHhhcccccccC
Confidence 12222 11 56899999999999999999999 789999999863
No 75
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.6e-48 Score=391.27 Aligned_cols=270 Identities=40% Similarity=0.685 Sum_probs=230.8
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.++..++||||++++++|.+...+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 58999999999999999999999999999999998654444555666788999999999999999999999999999999
Q ss_pred eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||++||+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.+|+++|+|||++..+....
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 156 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG---- 156 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC----
Confidence 99999999999976 4579999999999999999999999999999999999999999999999999987553321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcC-----CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--CCCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNS-----SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD--IRFPN 276 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~--~~~p~ 276 (489)
.......+||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+.+..+.+..+.... ..+|.
T Consensus 157 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 231 (331)
T cd05597 157 -----TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPP 231 (331)
T ss_pred -----CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCC
Confidence 111223579999999999863 457889999999999999999999999988888888776543 33443
Q ss_pred ---CCCHHHHHHHHHhhccCCCC--CCCCCCCCHHHHhcCCCCCCCCcccccCCCCC
Q 011287 277 ---YFSDAARDLIDRLLDVDPSG--RPGAGPGGYAVLKMHPFFKGIDWKNIRGQTPP 328 (489)
Q Consensus 277 ---~~~~~~~~Li~~~L~~dP~~--R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~p 328 (489)
.+++++++||++||+.++++ |+++ .++++||||.+++|..+....+|
T Consensus 232 ~~~~~~~~~~~li~~ll~~~~~r~~r~~~-----~~~l~hp~~~~~~~~~~~~~~~~ 283 (331)
T cd05597 232 DVTDVSEEAKDLIRRLICSPETRLGRNGL-----QDFKDHPFFEGIDWDNIRNSTAP 283 (331)
T ss_pred ccCCCCHHHHHHHHHHccCcccccCCCCH-----HHHhcCCCCCCCCHHHHhhCCCC
Confidence 47999999999999864433 5555 89999999999999988765444
No 76
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=9.9e-49 Score=386.51 Aligned_cols=262 Identities=32% Similarity=0.598 Sum_probs=228.2
Q ss_pred EeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCCCh
Q 011287 53 YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGEL 132 (489)
Q Consensus 53 LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L 132 (489)
||+|+||+||+|.+..+|+.||+|.+.+...........+..|+.+++.++||||++++++|.....+|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999999999999999999766544444445667899999999999999999999999999999999999999
Q ss_pred HHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCC
Q 011287 133 FDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208 (489)
Q Consensus 133 ~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~ 208 (489)
..++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++..+....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--------- 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--------- 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---------
Confidence 887743 3569999999999999999999999999999999999999999999999999987653321
Q ss_pred CCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH----HHHHHHHHhcCCCCCCCCCHHHHH
Q 011287 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE----WLIFQRIIARDIRFPNYFSDAARD 284 (489)
Q Consensus 209 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~ 284 (489)
.......||+.|+|||++.+..++.++|+|||||++|+|++|+.||..... ......+......+|..+++++.+
T Consensus 152 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (280)
T cd05608 152 -SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKS 230 (280)
T ss_pred -ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHH
Confidence 122345799999999999999999999999999999999999999986543 334455556666778889999999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
|+.+||+.||++||+..+...+++++||||++++|+.+..
T Consensus 231 li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~ 270 (280)
T cd05608 231 FCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEA 270 (280)
T ss_pred HHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhh
Confidence 9999999999999988777789999999999999998754
No 77
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.6e-48 Score=400.64 Aligned_cols=266 Identities=38% Similarity=0.637 Sum_probs=230.1
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEE
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~l 120 (489)
....++|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++.|.++..+
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 34568999999999999999999999999999999999875544455556678899999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
|+|||||+||+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|..+....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~- 196 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG- 196 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC-
Confidence 9999999999999998764 69999999999999999999999999999999999999999999999999998653221
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCC----CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--CCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSP----ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD--IRF 274 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~----~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~--~~~ 274 (489)
.....+.+||+.|+|||++.+.. ++.++|+|||||++|+|++|++||.+.+....+.+|.... +.+
T Consensus 197 --------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~ 268 (370)
T cd05621 197 --------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNF 268 (370)
T ss_pred --------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCC
Confidence 11224668999999999997543 7889999999999999999999999999888888887643 556
Q ss_pred CC--CCCHHHHHHHHHhhccCCCC--CCCCCCCCHHHHhcCCCCCCCCccc
Q 011287 275 PN--YFSDAARDLIDRLLDVDPSG--RPGAGPGGYAVLKMHPFFKGIDWKN 321 (489)
Q Consensus 275 p~--~~~~~~~~Li~~~L~~dP~~--R~t~~~~~~~~l~~hpff~~i~~~~ 321 (489)
|. .++..+++||.+||+.++.+ |+++ .++++||||++.+|+.
T Consensus 269 p~~~~~s~~~~~li~~~L~~~~~r~~R~~~-----~e~l~hp~~~~~~~~~ 314 (370)
T cd05621 269 PEDVEISKHAKNLICAFLTDREVRLGRNGV-----EEIKQHPFFKNDQWNW 314 (370)
T ss_pred CCcccCCHHHHHHHHHHccCchhccCCCCH-----HHHhcCcccCCCCcCh
Confidence 65 46999999999999855443 6666 8999999999876653
No 78
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3e-48 Score=392.68 Aligned_cols=273 Identities=38% Similarity=0.658 Sum_probs=233.2
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|++..+++.||+|++.+...........+..|..++..++|++|+++++.+.+...+|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 58999999999999999999999999999999997754444445566778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||++||+|.+++.+ .+.+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||+++.+....
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG---- 156 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC----
Confidence 99999999999987 4679999999999999999999999999999999999999999999999999997654321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcC-----CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--CCCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNS-----SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD--IRFPN 276 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~--~~~p~ 276 (489)
.......+||+.|+|||++.+ ..++.++|+|||||++|+|++|+.||.+.+..+.+.++.... +.+|.
T Consensus 157 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 231 (331)
T cd05624 157 -----TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPS 231 (331)
T ss_pred -----ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCC
Confidence 111224579999999999875 457889999999999999999999999988888888887643 34444
Q ss_pred ---CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCCCCC
Q 011287 277 ---YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQTPPK 329 (489)
Q Consensus 277 ---~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~p~ 329 (489)
.++.++++||.+||+.++ +|++. .+++++++||||++++|+.+....+|.
T Consensus 232 ~~~~~~~~~~~li~~ll~~~~-~~~~~--~~~~~~~~h~~f~~~~~~~~~~~~~~~ 284 (331)
T cd05624 232 HITDVSEEAKDLIQRLICSRE-RRLGQ--NGIEDFKKHAFFEGIDWENIRNLEAPY 284 (331)
T ss_pred ccccCCHHHHHHHHHHccCch-hhcCC--CCHHHHhcCCCcCCCCHHHHhhCCCCc
Confidence 368999999999999655 44432 245999999999999999987655443
No 79
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.7e-48 Score=392.10 Aligned_cols=271 Identities=37% Similarity=0.654 Sum_probs=232.6
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+++++.+++.||+|++.+...........+..|+.++..++|++|+++++.+.+...+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 58999999999999999999999999999999997654444455566788999999999999999999999999999999
Q ss_pred eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||+++|+|.+++.+ .+.+++..++.++.||+.||.|||++||+||||||+|||++.+++++|+|||++..+....
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~---- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG---- 156 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC----
Confidence 99999999999987 4679999999999999999999999999999999999999999999999999987543211
Q ss_pred CCCCCCCCccceecCCcCCChhhhc-----CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--CCCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLN-----SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD--IRFPN 276 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~--~~~p~ 276 (489)
.......+||+.|+|||++. ...++.++|||||||++|+|++|+.||.+.+....+.++.... ..+|.
T Consensus 157 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~ 231 (332)
T cd05623 157 -----TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPA 231 (332)
T ss_pred -----cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCC
Confidence 11222457999999999986 3457889999999999999999999999999888888887654 33443
Q ss_pred ---CCCHHHHHHHHHhhccCCCC--CCCCCCCCHHHHhcCCCCCCCCcccccCCCCCC
Q 011287 277 ---YFSDAARDLIDRLLDVDPSG--RPGAGPGGYAVLKMHPFFKGIDWKNIRGQTPPK 329 (489)
Q Consensus 277 ---~~~~~~~~Li~~~L~~dP~~--R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~p~ 329 (489)
.+++++++||++||+.++.+ |+++ +++++||||.+++|+.+....+|.
T Consensus 232 ~~~~~s~~~~~li~~ll~~~~~r~~r~~~-----~~~~~h~~f~~~~~~~~~~~~~~~ 284 (332)
T cd05623 232 QVTDVSEDAKDLIRRLICSREHRLGQNGI-----EDFKQHPFFTGIDWDNIRNCEAPY 284 (332)
T ss_pred ccccCCHHHHHHHHHHccChhhhcCCCCH-----HHHhCCCCcCCCCHHHHhhCCCCc
Confidence 57999999999999875544 3444 999999999999999987655443
No 80
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.3e-48 Score=383.70 Aligned_cols=268 Identities=33% Similarity=0.580 Sum_probs=233.4
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++.+.+...+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48999999999999999999999999999999977654444445566789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 126 SCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 126 ~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|+.+|+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++++++++|+|||++..+...
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG----- 155 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-----
Confidence 99999999888654 45999999999999999999999999999999999999999999999999998764321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHH----HHHHHHhcCCCCCCCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWL----IFQRIIARDIRFPNYFS 279 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~----~~~~i~~~~~~~p~~~~ 279 (489)
......+|++.|+|||++.+..++.++|+||+||++|+|++|+.||.+.+... ....+......+|..++
T Consensus 156 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd05605 156 ------ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFS 229 (285)
T ss_pred ------CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccC
Confidence 11224579999999999998889999999999999999999999998866533 23334445566778899
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
+.+.+||.+||+.||.+||+..+.+++++++||||...+|+.+..
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~ 274 (285)
T cd05605 230 EAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEA 274 (285)
T ss_pred HHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhh
Confidence 999999999999999999977666679999999999999998754
No 81
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.9e-48 Score=393.70 Aligned_cols=262 Identities=38% Similarity=0.649 Sum_probs=229.0
Q ss_pred EeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC---CCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 53 YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL---DHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 53 LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
||+|+||+||+|++..+|+.||+|++.+..............|..++..+ +||||+++++.|.+...+|+||||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999999999999999999775544444444455566766655 799999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|..++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++...... .
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~----------~ 150 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD----------N 150 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC----------C
Confidence 999999998889999999999999999999999999999999999999999999999999998753211 1
Q ss_pred CCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCC-CCCHHHHHHHH
Q 011287 210 DKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN-YFSDAARDLID 287 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~-~~~~~~~~Li~ 287 (489)
......+||..|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.++.+......+|. .+++++.+||+
T Consensus 151 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~ 230 (330)
T cd05586 151 KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVK 230 (330)
T ss_pred CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHH
Confidence 223456899999999998764 4889999999999999999999999999988888888888888876 47999999999
Q ss_pred HhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 288 RLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 288 ~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
+||+.||.+||++.. .+.++++||||..++|+.+...
T Consensus 231 ~~L~~~P~~R~~~~~-~~~~ll~h~~~~~~~~~~~~~~ 267 (330)
T cd05586 231 GLLNRNPQHRLGAHR-DAVELKEHPFFADIDWDLLSKK 267 (330)
T ss_pred HHcCCCHHHCCCCCC-CHHHHhcCccccCCCHHHHHhC
Confidence 999999999997643 4689999999999999887543
No 82
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-48 Score=382.09 Aligned_cols=266 Identities=32% Similarity=0.497 Sum_probs=233.7
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEE
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~l 120 (489)
....++|++..+||.|..++||+|+.+.++..||||+++.+..... ...+.+|...|+.++||||+++++.|..+..+
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~L 99 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLIDHPNIVTYHCSFVVDSEL 99 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhcCCCCcceEEEEEEeccee
Confidence 3457899999999999999999999999999999999987654433 67899999999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 121 YMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
|+||.||.+|++.+++... ..|+|..+..++.+++.||.|||++|-||||||+.||||+.+|.|||+|||.+..+-..
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 9999999999999999865 34999999999999999999999999999999999999999999999999988766443
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhc--CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLN--SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~--~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~ 276 (489)
.. ....+..+++||+.|||||++. ..+|+.|+||||||++..||.+|..||....+..++-.-+++.+..|.
T Consensus 180 G~------R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~ 253 (516)
T KOG0582|consen 180 GD------RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL 253 (516)
T ss_pred Cc------eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc
Confidence 21 1112227899999999999964 456999999999999999999999999999988877776776665332
Q ss_pred ----------CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCc
Q 011287 277 ----------YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDW 319 (489)
Q Consensus 277 ----------~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~ 319 (489)
.++..++.+|..||+.||.+|||| +++++|+||+...-
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptA-----skLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTA-----SKLLKHAFFKKAKS 301 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCH-----HHHhccHHHhhccc
Confidence 367889999999999999999999 88999999986553
No 83
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.3e-48 Score=396.38 Aligned_cols=268 Identities=39% Similarity=0.641 Sum_probs=230.3
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
..+..++|++.+.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.+++.++||||+++++.+.+...
T Consensus 38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 117 (371)
T ss_pred cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 34567899999999999999999999999999999999976554445555667889999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+|+|||||+||+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++..+....
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~ 196 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 196 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC
Confidence 99999999999999998764 68999999999999999999999999999999999999999999999999998654321
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCC----CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--CC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSP----ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD--IR 273 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~----~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~--~~ 273 (489)
.......+||+.|+|||++.+.. ++.++|||||||++|+|++|.+||.+.+....+.+|.... ..
T Consensus 197 ---------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~ 267 (371)
T cd05622 197 ---------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT 267 (371)
T ss_pred ---------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc
Confidence 11223568999999999997543 7889999999999999999999999999988888887643 44
Q ss_pred CCC--CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcc
Q 011287 274 FPN--YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWK 320 (489)
Q Consensus 274 ~p~--~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~ 320 (489)
+|. .++..+++||.+||. +|.+|++. .+++++++||||++.+|.
T Consensus 268 ~~~~~~~s~~~~~li~~~L~-~~~~r~~r--~~~~ei~~h~~~~~~~~~ 313 (371)
T cd05622 268 FPDDNDISKEAKNLICAFLT-DREVRLGR--NGVEEIKRHLFFKNDQWA 313 (371)
T ss_pred CCCcCCCCHHHHHHHHHHcC-ChhhhcCC--CCHHHHhcCcccCCCChh
Confidence 554 589999999999998 66665543 134999999999986553
No 84
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-49 Score=394.42 Aligned_cols=259 Identities=31% Similarity=0.526 Sum_probs=238.0
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
.=|.+.+.||+|-|++|-+|++.=||..||||+++|..+.... ...+..|+..|+.++|||||+||++......+|+|+
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~s-t~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLS-TGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhh-hhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 4589999999999999999999999999999999998766544 455667999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeC-CCCCEEEeeccCccccCCccccc
Q 011287 125 ESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLT-ADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 125 E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~-~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|.=.+|+|++||.++ ..+.|+.++.|++||+.|+.|||+..+|||||||||+.+- .-|-+||+|||++-.+.+
T Consensus 97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P----- 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP----- 171 (864)
T ss_pred EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCC-----
Confidence 999999999999876 4599999999999999999999999999999999998765 458999999999877643
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCC-CCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHH
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPAT-FGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDA 281 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~-~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~ 281 (489)
.....++||+..|-|||+|.+..|+ +++||||||||||-|++|++||...++.+++-+|+.+.+..|..++.+
T Consensus 172 ------G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~e 245 (864)
T KOG4717|consen 172 ------GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKE 245 (864)
T ss_pred ------cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHH
Confidence 3456689999999999999998875 678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcc
Q 011287 282 ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWK 320 (489)
Q Consensus 282 ~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~ 320 (489)
++|||..||+.||.+|.+. ++|..|+|++++|..
T Consensus 246 CrdLI~sMLvRdPkkRAsl-----EeI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 246 CRDLIQSMLVRDPKKRASL-----EEIVSTSWLQAGDRG 279 (864)
T ss_pred HHHHHHHHHhcCchhhccH-----HHHhccccccCCCCC
Confidence 9999999999999999887 899999999998853
No 85
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-49 Score=379.03 Aligned_cols=259 Identities=31% Similarity=0.471 Sum_probs=221.9
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc-----CCE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD-----TFS 119 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-----~~~ 119 (489)
..|..++.||+|+||.|+.|.++.||+.||||.+...+.. .-......+|+.+|+.++|+||+.+++++.. -..
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~-~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFEN-QIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhc-hHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 3455589999999999999999999999999998754333 3445567789999999999999999999975 356
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+|+|+|+|+ -||...|+.+..+++..++++++||+.||.|+|+.||+||||||+|+|++.+..+||+|||+|+.....
T Consensus 101 vYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~- 178 (359)
T KOG0660|consen 101 VYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF- 178 (359)
T ss_pred eEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc-
Confidence 999999995 499999988777999999999999999999999999999999999999999999999999999976532
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhc-CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--------
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLN-SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-------- 270 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-------- 270 (489)
........++.|.+|+|||++. ...|+.+.||||+|||+.||++|++.|.|.+...+++.|+..
T Consensus 179 -------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 179 -------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred -------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 1123445789999999999974 566999999999999999999999999999888777776541
Q ss_pred ---------------CCCCC--------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 271 ---------------DIRFP--------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 271 ---------------~~~~p--------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
....| +..++.+.||+++||..||.+|+|+ ++++.||||....
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita-----~eAL~hPYl~~~h 317 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITA-----EEALAHPYLAPYH 317 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCH-----HHHhcChhhhhhc
Confidence 11111 2578999999999999999999999 8999999998643
No 86
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.2e-50 Score=373.11 Aligned_cols=258 Identities=33% Similarity=0.549 Sum_probs=232.1
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeeccccc-----chhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcC
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT-----KENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDT 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~-----~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 117 (489)
.+.|.--+.||+|..++|..+.++.||+++|+|++...... .....+....|+.+|+++ .||+|+++.++|+..
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 45678888999999999999999999999999999743222 222345566799999988 799999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 118 FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
..+++|+|.|+.|+|++++...-.++|..++.++.|+++|++|||.++||||||||+|||++++++++|+|||+|+.+..
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~ 175 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEP 175 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCC
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999999997653
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhc------CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLN------SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~------~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~ 271 (489)
..+....||||+|+|||.+. ..+|+..+|+||+|||+|.||.|.+||--.....++..|..+.
T Consensus 176 -----------GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGk 244 (411)
T KOG0599|consen 176 -----------GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGK 244 (411)
T ss_pred -----------chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcc
Confidence 34556789999999999983 4458899999999999999999999999999999999999999
Q ss_pred CCCCC----CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 272 IRFPN----YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 272 ~~~p~----~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
++|.. +++.+++|||.+||+.||.+|+|+ ++.+.||||..+
T Consensus 245 yqF~speWadis~~~KdLIsrlLqVdp~~Rita-----ke~LaHpff~q~ 289 (411)
T KOG0599|consen 245 YQFRSPEWADISATVKDLISRLLQVDPTKRITA-----KEALAHPFFIQI 289 (411)
T ss_pred cccCCcchhhccccHHHHHHHHHeeCchhcccH-----HHHhcChHHHHH
Confidence 98853 589999999999999999999999 899999999754
No 87
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-49 Score=397.46 Aligned_cols=252 Identities=32% Similarity=0.538 Sum_probs=231.0
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
..|.....||+|+-|.||.|+...+++.||||.|... .....+.+.+|+.+|+..+|+|||.+++.|...+.+|+||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~---~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLR---KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEec---cCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 4688999999999999999999999999999999876 3445577889999999999999999999999889999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||++||+|.+.+... .++|.++..++.+++.||+|||.+||+|||||.+|||++.+|.+||+|||++..+...
T Consensus 350 Eym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~------ 422 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE------ 422 (550)
T ss_pred eecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccc------
Confidence 999999999988865 5999999999999999999999999999999999999999999999999999876543
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc---CCCCCCCCCHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR---DIRFPNYFSDA 281 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~---~~~~p~~~~~~ 281 (489)
.....+.+||+.|||||++....|++++||||||+++.||+-|.+||-..++...+..|-.. .+..|+.+|++
T Consensus 423 ----~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~ 498 (550)
T KOG0578|consen 423 ----QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPE 498 (550)
T ss_pred ----cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHH
Confidence 23667889999999999999999999999999999999999999999988888777777553 45678899999
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 282 ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 282 ~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
++||+.+||+.|+.+|++| .+||.||||+
T Consensus 499 ~kdFL~~cL~~dv~~RasA-----~eLL~HpFl~ 527 (550)
T KOG0578|consen 499 LKDFLDRCLVVDVEQRASA-----KELLEHPFLK 527 (550)
T ss_pred HHHHHHHHhhcchhcCCCH-----HHHhcChhhh
Confidence 9999999999999999999 8999999995
No 88
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.3e-47 Score=374.35 Aligned_cols=267 Identities=42% Similarity=0.731 Sum_probs=244.1
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++++++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998765555555677888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++++|.+++.+.+.+++..+..++.||+.||.|||+.||+||||+|.||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------ 154 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------ 154 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC------
Confidence 99999999999998889999999999999999999999999999999999999999999999999998765321
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARD 284 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ 284 (489)
.....|++.|+|||.+.+...+.++|+||||+++|+|++|..||...+.....+.+......+|..++..+++
T Consensus 155 -------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 227 (290)
T cd05580 155 -------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKD 227 (290)
T ss_pred -------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHH
Confidence 2345789999999999888889999999999999999999999998888888888888888899999999999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
+|.+||+.||.+|++.....++++++||||+.++|..+..
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~ 267 (290)
T cd05580 228 LIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQ 267 (290)
T ss_pred HHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhh
Confidence 9999999999999976656779999999999999998754
No 89
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.1e-47 Score=377.42 Aligned_cols=255 Identities=27% Similarity=0.436 Sum_probs=216.1
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|+++.+++.||+|++...... ......+.+|+.+++.++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 4799999999999999999999999999999999765332 233456778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||++++.+..+....+.+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 154 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS----- 154 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc-----
Confidence 999987776555555679999999999999999999999999999999999999999999999999998653221
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-------------
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD------------- 271 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~------------- 271 (489)
........||+.|+|||++.+..++.++|+|||||++|+|++|++||.+.+.......+....
T Consensus 155 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 155 ----NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred ----cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence 112234679999999999998889999999999999999999999999877655443332210
Q ss_pred ------CCCC-------------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 ------IRFP-------------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 ------~~~p-------------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
..+| ..++.++.+||++||+.||++|||+ +++++||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~-----~~~l~hp~f 287 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLT-----EQCLNHPAF 287 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCH-----HHHhcCCCC
Confidence 1111 2368889999999999999999999 899999998
No 90
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5.4e-47 Score=375.22 Aligned_cols=276 Identities=33% Similarity=0.563 Sum_probs=232.6
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+..|+.+++.++|++|+++++.+.+...+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 48899999999999999999999999999999977655444445566779999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 126 SCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 126 ~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|+.|++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~----- 155 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-----
Confidence 99999999988654 35999999999999999999999999999999999999999999999999998754321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHH---HHHHHHH-hcCCCCCCCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEW---LIFQRII-ARDIRFPNYFS 279 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~---~~~~~i~-~~~~~~p~~~~ 279 (489)
.......|+..|+|||++.+..++.++|+|||||++|+|++|++||...... .....+. .....++..++
T Consensus 156 ------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd05630 156 ------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFS 229 (285)
T ss_pred ------ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCC
Confidence 1122447999999999999989999999999999999999999999875431 2222222 22335677899
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC-CCCCCCCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG-QTPPKLAS 332 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~-~~~p~~~~ 332 (489)
+++.+||++||+.||++|||+...++.++++||||..++|..+.. +.+|++.|
T Consensus 230 ~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05630 230 PDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKP 283 (285)
T ss_pred HHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCCCCCCC
Confidence 999999999999999999997655679999999999999997654 34444443
No 91
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.4e-47 Score=378.88 Aligned_cols=258 Identities=26% Similarity=0.430 Sum_probs=212.3
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.++|++.+.||+|+||.||+|++..+++.||+|++..... ........+|+.+++.++||||+++++++.+...+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 5789999999999999999999999999999999875422 22234466799999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|||+. ++|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 157 (303)
T cd07869 82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--- 157 (303)
T ss_pred EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC---
Confidence 99996 5888877664 569999999999999999999999999999999999999999999999999987542211
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHH-HHHHHHHhc--CC------
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEW-LIFQRIIAR--DI------ 272 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~-~~~~~i~~~--~~------ 272 (489)
......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+..+. .....+... ..
T Consensus 158 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 158 -------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred -------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhcc
Confidence 12234578999999999865 45788999999999999999999999875442 222222110 00
Q ss_pred ---C------------CC---------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCc
Q 011287 273 ---R------------FP---------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDW 319 (489)
Q Consensus 273 ---~------------~p---------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~ 319 (489)
. .| ..+++.+++||++||+.||++|||+ .++++||||+++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~-----~~~l~h~~f~~~~~ 296 (303)
T cd07869 231 GVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSA-----QAALSHEYFSDLPP 296 (303)
T ss_pred chhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCH-----HHHhcCcccccCCh
Confidence 0 01 0245789999999999999999999 89999999998754
No 92
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.8e-47 Score=375.99 Aligned_cols=254 Identities=25% Similarity=0.408 Sum_probs=215.6
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
.+++|++.+.||+|+||.||+|++..++..||+|++..... ......+.+|+.+++.++||||+++++++.+....|+
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTL 80 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 46899999999999999999999999999999999865432 2223456679999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 123 ALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
||||+.+ +|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 81 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 81 VFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred EEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 9999985 9999887654 48999999999999999999999999999999999999999999999999987543211
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC---------
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD--------- 271 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~--------- 271 (489)
.......|++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+....+....
T Consensus 158 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07871 158 --------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWP 229 (288)
T ss_pred --------ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhh
Confidence 12234578999999999865 558899999999999999999999999888766655543210
Q ss_pred ----------CCCC-----------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 ----------IRFP-----------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 ----------~~~p-----------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
..+| ..+++++++||.+||+.||.+|||+ +++++||||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~-----~~~l~hp~f 288 (288)
T cd07871 230 GITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISA-----EAALRHSYF 288 (288)
T ss_pred ccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCH-----HHHhcCCCC
Confidence 1111 2468899999999999999999999 899999998
No 93
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-47 Score=371.52 Aligned_cols=258 Identities=29% Similarity=0.471 Sum_probs=224.3
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCC-ccEEEEEEEcCC----
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG-VVRLFFTFQDTF---- 118 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~---- 118 (489)
+..|+.++.||+|+||+||+|+++.+|+.||+|.+.-.... +.......+|+.+|+.|+|+| |++|++++.+..
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 67799999999999999999999999999999999765432 445566788999999999999 999999998877
Q ss_pred --EEEEEEeccCCCChHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCc
Q 011287 119 --SLYMALESCEGGELFDQITSKG----HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 119 --~lylV~E~~~gg~L~~~l~~~~----~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a 192 (489)
.+|+|+||++. +|..++...+ .++...++.++.||+.||+|||++||+||||||+||||+++|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 89999999976 9999998765 4788899999999999999999999999999999999999999999999999
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR- 270 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~- 270 (489)
+.+.-+. .....-++|.+|+|||+|.+. .|+...||||+|||++||+++++.|.+.++.++..+|...
T Consensus 168 ra~~ip~----------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~l 237 (323)
T KOG0594|consen 168 RAFSIPM----------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLL 237 (323)
T ss_pred HHhcCCc----------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHc
Confidence 9654321 224456899999999999876 6999999999999999999999999999999988888651
Q ss_pred -----------------CCCCCC------------CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 271 -----------------DIRFPN------------YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 271 -----------------~~~~p~------------~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
...||. ..++++.+|+.+||+.+|.+|.+| +.++.||||..+.
T Consensus 238 GtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa-----~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 238 GTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISA-----KGALTHPYFSELP 309 (323)
T ss_pred CCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCH-----HHHhcChhhcccc
Confidence 111221 124589999999999999999999 8899999998764
No 94
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7.6e-47 Score=372.46 Aligned_cols=262 Identities=29% Similarity=0.572 Sum_probs=222.4
Q ss_pred EeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCCCh
Q 011287 53 YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGEL 132 (489)
Q Consensus 53 LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L 132 (489)
||+|+||.||+|+++.+|+.||+|.+.+..............|+++++.++||||+++++.|.+...+|+||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999999999999999999765544444445566799999999999999999999999999999999999999
Q ss_pred HHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCC
Q 011287 133 FDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDD 210 (489)
Q Consensus 133 ~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~ 210 (489)
.+++...+ .+++..+..++.||+.||+|||+.||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~----------- 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK----------- 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-----------
Confidence 98886543 48999999999999999999999999999999999999999999999999987653221
Q ss_pred CccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH----HHHHHHHHhcCCCCC-CCCCHHHHHH
Q 011287 211 KACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE----WLIFQRIIARDIRFP-NYFSDAARDL 285 (489)
Q Consensus 211 ~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~----~~~~~~i~~~~~~~p-~~~~~~~~~L 285 (489)
......|+..|+|||++.+..++.++|+|||||++|+|++|+.||..... ......+......++ ..+++++++|
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 229 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDI 229 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHH
Confidence 11234689999999999988899999999999999999999999976533 334444444444443 4689999999
Q ss_pred HHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCC
Q 011287 286 IDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQT 326 (489)
Q Consensus 286 i~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~ 326 (489)
|.+||+.||.+||++.+. ..+++.||||++++|..+....
T Consensus 230 i~~~L~~~P~~R~~~~~~-~~~~~~h~~f~~~~~~~~~~~~ 269 (277)
T cd05607 230 CRLFLAKKPEDRLGSREK-NDDPRKHEFFKTINFPRLEAGL 269 (277)
T ss_pred HHHHhccCHhhCCCCccc-hhhhhcChhhcCCCHHHHhcCc
Confidence 999999999999999652 4778899999999998887543
No 95
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2e-46 Score=370.98 Aligned_cols=275 Identities=32% Similarity=0.573 Sum_probs=236.3
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
.|+..+.||+|+||+||+|.+..+++.||+|.+.+...........+.+|+.+++.++|+||+++++.|.+...+|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 47899999999999999999999999999999987655545555567789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 126 SCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 126 ~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|+.+++|.+++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG----- 155 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-----
Confidence 99999999888654 36999999999999999999999999999999999999999999999999998754321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHH----HHHHhcCCCCCCCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIF----QRIIARDIRFPNYFS 279 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~----~~i~~~~~~~p~~~~ 279 (489)
.......|+..|+|||++.+..++.++|+|||||++|+|++|..||.+....... ..+......++..++
T Consensus 156 ------~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd05632 156 ------ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFS 229 (285)
T ss_pred ------CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCC
Confidence 1122457999999999999888999999999999999999999999887664433 333444456677899
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC-CCCCCCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG-QTPPKLA 331 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~-~~~p~~~ 331 (489)
.++.+|+.+||+.||++||++.+.++.+++.|+||+.++|+.+.. +..|++.
T Consensus 230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 282 (285)
T cd05632 230 EEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFV 282 (285)
T ss_pred HHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCC
Confidence 999999999999999999998877789999999999999997643 3334433
No 96
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.5e-46 Score=375.29 Aligned_cols=285 Identities=41% Similarity=0.692 Sum_probs=244.9
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+..|+.+++.++||||+++++.+.+....|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 47999999999999999999999999999999998775555455667888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 125 ESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 125 E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
||+.+++|.+++.+. ..+++..++.++.|++.||+|||+.|++||||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 999999999998764 569999999999999999999999999999999999999999999999999987653321100
Q ss_pred cCC-------------------CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHH
Q 011287 203 LPN-------------------AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLI 263 (489)
Q Consensus 203 ~~~-------------------~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~ 263 (489)
... .........++||..|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 000 0111233456899999999999998899999999999999999999999999988888
Q ss_pred HHHHHhcCCCCCCC--CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCCCCCC
Q 011287 264 FQRIIARDIRFPNY--FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQTPPKL 330 (489)
Q Consensus 264 ~~~i~~~~~~~p~~--~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~p~~ 330 (489)
+..+......+|.. ++.++.++|.+||+.||++||++.. +.+++++||||++++|..+....||..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~-~~~~ll~~~~~~~~~~~~~~~~~~~~~ 308 (316)
T cd05574 241 FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKR-GAAEIKQHPFFRGVNWALIRHTTPPII 308 (316)
T ss_pred HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchh-hHHHHHcCchhhcCChhhcccCCCCCC
Confidence 88888777777665 6999999999999999999999321 238999999999999999887666654
No 97
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.8e-46 Score=379.42 Aligned_cols=260 Identities=28% Similarity=0.480 Sum_probs=213.5
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC-----CEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT-----FSL 120 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~~l 120 (489)
+|++.+.||+|+||.||+|++..+|..||||.+...... ......+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH-VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc-chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 599999999999999999999999999999998653222 22334577899999999999999999988543 358
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
|+|||||. ++|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++......
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~- 157 (338)
T cd07859 80 YVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT- 157 (338)
T ss_pred EEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccccccc-
Confidence 99999995 6999999888889999999999999999999999999999999999999999999999999997543221
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcC--CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--------
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNS--SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-------- 270 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-------- 270 (489)
.........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.......+...
T Consensus 158 ------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 231 (338)
T cd07859 158 ------PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET 231 (338)
T ss_pred ------CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 01112235689999999999876 57899999999999999999999999887654433222110
Q ss_pred ------------------C--CCC---CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCc
Q 011287 271 ------------------D--IRF---PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDW 319 (489)
Q Consensus 271 ------------------~--~~~---p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~ 319 (489)
. ..+ -..+++++.+||.+||+.||++||++ +++++||||+++..
T Consensus 232 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~e~l~hp~f~~~~~ 298 (338)
T cd07859 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTA-----EEALADPYFKGLAK 298 (338)
T ss_pred HHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCH-----HHHhcCchhhhcCc
Confidence 0 000 02367889999999999999999998 89999999987653
No 98
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-47 Score=369.19 Aligned_cols=251 Identities=32% Similarity=0.549 Sum_probs=216.6
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC-----C
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT-----F 118 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 118 (489)
.=.|.-.+++|.|+||.||.|...++++.||||..-.+. .+-.+|.++|+.++|||||+|..+|... -
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchh
Confidence 346999999999999999999999999999999875432 2455699999999999999998888532 2
Q ss_pred EEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC-CCEEEeeccCcc
Q 011287 119 SLYMALESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVK 193 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~-g~ikL~DFG~a~ 193 (489)
++.+||||++. +|.++++. +..++.-.++.|.+||+.||.|||+.||+||||||+|+|+|.+ |.+||||||+|+
T Consensus 96 ~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 96 YLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 46789999986 99998884 4679999999999999999999999999999999999999976 999999999999
Q ss_pred ccCCccccccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--
Q 011287 194 PMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-- 270 (489)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-- 270 (489)
.+... ....++..|..|+|||.+.+. .|+.+.||||.||++.||+-|++.|.|.+...++..|.+.
T Consensus 175 ~L~~~-----------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG 243 (364)
T KOG0658|consen 175 VLVKG-----------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLG 243 (364)
T ss_pred eeccC-----------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhC
Confidence 87543 334688899999999998765 5999999999999999999999999999988888777651
Q ss_pred ---------------CCCCC------------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 271 ---------------DIRFP------------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 271 ---------------~~~~p------------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
+..+| ...++++.+|+.++|+.+|.+|.++ .+++.||||..+.
T Consensus 244 ~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~-----~~~l~h~fFdelr 313 (364)
T KOG0658|consen 244 TPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSA-----LEALAHPFFDELR 313 (364)
T ss_pred CCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCH-----HHHhcchhhHHhh
Confidence 12222 3468999999999999999999999 8899999998654
No 99
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-47 Score=382.87 Aligned_cols=257 Identities=28% Similarity=0.495 Sum_probs=236.4
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE-EE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS-LY 121 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~-ly 121 (489)
.+++|..++.+|+|+||.+++++++..++.|++|.+.-........ .....|..+++++.|||||.+++.|.+++. ++
T Consensus 2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r-~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~ 80 (426)
T KOG0589|consen 2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPER-RSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC 80 (426)
T ss_pred ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhh-HHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence 3689999999999999999999999999999999998765554433 366779999999999999999999998887 99
Q ss_pred EEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 122 MALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+||+||+||+|.+.|.+. ..|+++.+..|+.||+.||.|||+++|+|||||+.|||++.++.|+|+|||+|+.+....
T Consensus 81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 999999999999999865 359999999999999999999999999999999999999999999999999999886532
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-CCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD-IRFPNYF 278 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~-~~~p~~~ 278 (489)
....+.+||+.|++||++.+.+|+.++|||||||++|||++-+++|.+.+......+|.... ...|..+
T Consensus 161 ----------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~y 230 (426)
T KOG0589|consen 161 ----------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMY 230 (426)
T ss_pred ----------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccc
Confidence 35678999999999999999999999999999999999999999999999999999999887 5688999
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
+.+++.||..||..+|..||++ .+++.+|...
T Consensus 231 s~el~~lv~~~l~~~P~~RPsa-----~~LL~~P~l~ 262 (426)
T KOG0589|consen 231 SSELRSLVKSMLRKNPEHRPSA-----LELLRRPHLL 262 (426)
T ss_pred cHHHHHHHHHHhhcCCccCCCH-----HHHhhChhhh
Confidence 9999999999999999999999 8899998775
No 100
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.8e-46 Score=378.66 Aligned_cols=259 Identities=27% Similarity=0.437 Sum_probs=215.7
Q ss_pred CCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 38 ~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
+......++|++++.||+|+||.||+|++..+|+.||||++.... .......+.+|+.+++.++|+||+++++++.+.
T Consensus 67 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 144 (353)
T PLN00034 67 PSAAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHN 144 (353)
T ss_pred CCCCCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC
Confidence 334556789999999999999999999999999999999986542 233445678899999999999999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 118 FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
..+|+||||+++|+|... ...++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+..
T Consensus 145 ~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~ 220 (353)
T PLN00034 145 GEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQ 220 (353)
T ss_pred CeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence 999999999999998652 3467888899999999999999999999999999999999999999999999886532
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcC-----CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHH---HHHHHH-H
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNS-----SPATFGNDLWALGCTLYQMLSGTSPFKDTSEW---LIFQRI-I 268 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~---~~~~~i-~ 268 (489)
.. ......+||..|+|||++.. ...+.++|||||||++|+|++|+.||...... .....+ .
T Consensus 221 ~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 290 (353)
T PLN00034 221 TM----------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM 290 (353)
T ss_pred cc----------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc
Confidence 21 12234579999999999843 23456899999999999999999999743322 122222 2
Q ss_pred hcCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 269 ARDIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 269 ~~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
......+..++.++++||.+||+.||++||++ .++++||||.+-
T Consensus 291 ~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~-----~ell~hp~~~~~ 334 (353)
T PLN00034 291 SQPPEAPATASREFRHFISCCLQREPAKRWSA-----MQLLQHPFILRA 334 (353)
T ss_pred cCCCCCCCccCHHHHHHHHHHccCChhhCcCH-----HHHhcCcccccC
Confidence 23445667889999999999999999999998 899999999864
No 101
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.4e-45 Score=373.10 Aligned_cols=258 Identities=24% Similarity=0.427 Sum_probs=220.9
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
+..++|++.+.||+|+||.||+|++..+|..||+|++.... .......+.+|+.+++.++||||+++++++.+...+|
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 45689999999999999999999999999999999987542 2334566888999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 122 MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM-GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~-gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
+||||+++|+|.+++.+.+.+++..+..++.|++.||.|||+. +|+||||||+|||++.+++++|+|||++......
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred EEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 9999999999999999888899999999999999999999986 6999999999999999999999999998754321
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHH------------
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRII------------ 268 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~------------ 268 (489)
.....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..++...+-
T Consensus 158 ----------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (331)
T cd06649 158 ----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPH 227 (331)
T ss_pred ----------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCcc
Confidence 2234579999999999999899999999999999999999999998765544322111
Q ss_pred ----------------------------------hc-CCCCC-CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCC
Q 011287 269 ----------------------------------AR-DIRFP-NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHP 312 (489)
Q Consensus 269 ----------------------------------~~-~~~~p-~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hp 312 (489)
.. ....+ ..+++++++||.+||+.||++||++ .++++||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~-----~ell~h~ 302 (331)
T cd06649 228 SISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADL-----KMLMNHT 302 (331)
T ss_pred ccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCH-----HHHhcCh
Confidence 00 01111 2468899999999999999999999 8999999
Q ss_pred CCCCCC
Q 011287 313 FFKGID 318 (489)
Q Consensus 313 ff~~i~ 318 (489)
||+...
T Consensus 303 ~~~~~~ 308 (331)
T cd06649 303 FIKRSE 308 (331)
T ss_pred HHhhcc
Confidence 998644
No 102
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=8.6e-46 Score=388.63 Aligned_cols=254 Identities=28% Similarity=0.448 Sum_probs=211.4
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC----
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT---- 117 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---- 117 (489)
....+|++++.||+|+||.||+|.+..+++.||||.+.+.. ....+|+.+|+.++||||++++++|...
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKK 135 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence 34568999999999999999999999999999999885431 2244699999999999999998877432
Q ss_pred ----CEEEEEEeccCCCChHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC-CEEEee
Q 011287 118 ----FSLYMALESCEGGELFDQIT----SKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG-HIKIAD 188 (489)
Q Consensus 118 ----~~lylV~E~~~gg~L~~~l~----~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g-~ikL~D 188 (489)
..+++||||+++ +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeec
Confidence 357899999985 7776664 345799999999999999999999999999999999999999765 699999
Q ss_pred ccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHH
Q 011287 189 FGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267 (489)
Q Consensus 189 FG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i 267 (489)
||+|+.+... ......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+....+.++
T Consensus 215 FGla~~~~~~-----------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i 283 (440)
T PTZ00036 215 FGSAKNLLAG-----------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRI 283 (440)
T ss_pred cccchhccCC-----------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 9999865321 122356789999999998664 6899999999999999999999999998876666555
Q ss_pred Hhc-----------------CC------------CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 268 IAR-----------------DI------------RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 268 ~~~-----------------~~------------~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
... .. .+|...++++++||.+||+.||.+|||+ .++++||||..+.
T Consensus 284 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta-----~e~l~hp~f~~~~ 358 (440)
T PTZ00036 284 IQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNP-----IEALADPFFDDLR 358 (440)
T ss_pred HHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCH-----HHHhCChhHHhhh
Confidence 431 11 1344578899999999999999999999 8999999998765
Q ss_pred c
Q 011287 319 W 319 (489)
Q Consensus 319 ~ 319 (489)
.
T Consensus 359 ~ 359 (440)
T PTZ00036 359 D 359 (440)
T ss_pred c
Confidence 4
No 103
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-46 Score=383.45 Aligned_cols=260 Identities=33% Similarity=0.547 Sum_probs=243.1
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
.......|.+.+.||+|.|+.|.+|++..|+..||||+++|.......... +.+|+++|..|+|||||++|.++..+..
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k-~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQK-LGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHH-HHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 445678899999999999999999999999999999999998777665555 8889999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+|+||||+.+|++++++.+++.+.+..++.++.|++.|++|||+++|+|||||++||||+.++++||+|||++..+..
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~-- 207 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY-- 207 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987753
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCC-CCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPA-TFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF 278 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~ 278 (489)
.....++||++.|.|||++.+..| ++.+|+||||+++|.|+.|.+||.+.+-.+...+.+.+.+.+|-.+
T Consensus 208 ---------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~m 278 (596)
T KOG0586|consen 208 ---------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYM 278 (596)
T ss_pred ---------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeeccccee
Confidence 234568999999999999998875 6889999999999999999999999999999899999999999999
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
+.++++||+++|.++|.+|+++ ++++.|.|...
T Consensus 279 s~dce~lLrk~lvl~Pskr~~~-----dqim~~~W~n~ 311 (596)
T KOG0586|consen 279 SCDCEDLLRKFLVLNPSKRGPC-----DQIMKDRWRND 311 (596)
T ss_pred echhHHHHHHhhccCccccCCH-----HHhhhhcccch
Confidence 9999999999999999999999 88999999863
No 104
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.9e-46 Score=383.23 Aligned_cols=250 Identities=30% Similarity=0.507 Sum_probs=217.4
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-C-----CCccEEEEEEEcCCE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-H-----PGVVRLFFTFQDTFS 119 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-h-----pnIv~l~~~~~~~~~ 119 (489)
+|++.++||+|+||+|.+|.+..|++.||||++++. .....+...|+.+|..|+ | -|||+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 689999999999999999999999999999999764 334455667999999886 3 589999999999999
Q ss_pred EEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC--CEEEeeccCcccc
Q 011287 120 LYMALESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG--HIKIADFGSVKPM 195 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g--~ikL~DFG~a~~~ 195 (489)
+|+|+|.+.. +|.++|+.+. .|+...++.++.||+.||.+||++||||+|||||||||.+-+ .|||+|||+|+..
T Consensus 263 lciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 9999999965 9999999863 489999999999999999999999999999999999997654 7999999999864
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-----
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR----- 270 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~----- 270 (489)
. ....+++.+..|+|||++.+.+|+.+.||||||||++||++|.+.|.|.++.+++..|..-
T Consensus 342 ~-------------q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp 408 (586)
T KOG0667|consen 342 S-------------QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPP 408 (586)
T ss_pred C-------------CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCC
Confidence 3 2334889999999999999999999999999999999999999999999999998888650
Q ss_pred ---------------C--------------------------------CCCCC-----------CCCHHHHHHHHHhhcc
Q 011287 271 ---------------D--------------------------------IRFPN-----------YFSDAARDLIDRLLDV 292 (489)
Q Consensus 271 ---------------~--------------------------------~~~p~-----------~~~~~~~~Li~~~L~~ 292 (489)
. ...|. .-...+.|||.+||+.
T Consensus 409 ~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~ 488 (586)
T KOG0667|consen 409 PKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEW 488 (586)
T ss_pred HHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhcc
Confidence 0 00120 0124579999999999
Q ss_pred CCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 293 DPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 293 dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
||.+|+|+ .++++||||.+..
T Consensus 489 dP~~R~tp-----~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 489 DPAERITP-----AQALNHPFLTGTS 509 (586)
T ss_pred CchhcCCH-----HHHhcCccccccc
Confidence 99999999 8899999998654
No 105
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-45 Score=380.89 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=210.5
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
....+|++++.||+|+||.||+|.+..+++.||+|.... ..+.+|+.+++.++||||++++++|......+
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence 455789999999999999999999999999999996532 23567999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 122 MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
+|||++. ++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+|+.....
T Consensus 160 lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~--- 235 (391)
T PHA03212 160 LILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI--- 235 (391)
T ss_pred EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc---
Confidence 9999995 699999988888999999999999999999999999999999999999999999999999999753221
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC-------HHHHHHHHHhc----
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS-------EWLIFQRIIAR---- 270 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~-------~~~~~~~i~~~---- 270 (489)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||.... ....+..+...
T Consensus 236 ------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~ 309 (391)
T PHA03212 236 ------NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTH 309 (391)
T ss_pred ------cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCC
Confidence 1122345689999999999999999999999999999999999998875421 11112222110
Q ss_pred ----------------------CCCCC---------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 271 ----------------------DIRFP---------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 271 ----------------------~~~~p---------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
....| ..++.++.+||.+||+.||++|||+ .++++||||..+
T Consensus 310 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta-----~elL~hp~f~~~ 382 (391)
T PHA03212 310 PNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSA-----EALLDFAAFQDI 382 (391)
T ss_pred hhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCH-----HHHhcChhhccC
Confidence 00001 1246789999999999999999999 899999999864
No 106
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.2e-45 Score=360.53 Aligned_cols=262 Identities=35% Similarity=0.605 Sum_probs=219.3
Q ss_pred EEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHh---CCCCCccEEEEEEEcCCEEEEEEeccC
Q 011287 52 IYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ---LDHPGVVRLFFTFQDTFSLYMALESCE 128 (489)
Q Consensus 52 ~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~---l~hpnIv~l~~~~~~~~~lylV~E~~~ 128 (489)
.||+|+||.||+|.+..+++.||+|.+.+.............+|..+++. .+||+|+.+++++...+..|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 48999999999999999999999999987655433333334445444443 479999999999999999999999999
Q ss_pred CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCC
Q 011287 129 GGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208 (489)
Q Consensus 129 gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~ 208 (489)
+|+|.+++...+.+++..+..++.|++.||+|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~---------- 150 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---------- 150 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc----------
Confidence 9999999988888999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCccceecCCcCCChhhhc-CCCCCCCCcchhhhHHHHHHhhCCCCCCCCC---HHHHHHHHHhcCCCCCCCCCHHHHH
Q 011287 209 DDKACTFVGTAAYVPPEVLN-SSPATFGNDLWALGCTLYQMLSGTSPFKDTS---EWLIFQRIIARDIRFPNYFSDAARD 284 (489)
Q Consensus 209 ~~~~~~~~gt~~Y~aPE~l~-~~~~~~~sDiwSLG~ilyelltG~~PF~~~~---~~~~~~~i~~~~~~~p~~~~~~~~~ 284 (489)
......||..|+|||.+. +..++.++|+|||||++|+|++|..||.... ..............+|+.+++++.+
T Consensus 151 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (279)
T cd05633 151 --KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKS 228 (279)
T ss_pred --CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHH
Confidence 112346899999999986 4568899999999999999999999997532 2233333344556778889999999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
+|.+||+.||++|++....+++++++||||++++|.....+
T Consensus 229 li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 269 (279)
T cd05633 229 LLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQ 269 (279)
T ss_pred HHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHHhcC
Confidence 99999999999999865556799999999999999886543
No 107
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-47 Score=357.70 Aligned_cols=260 Identities=33% Similarity=0.526 Sum_probs=226.5
Q ss_pred eeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEEEEEeccC
Q 011287 50 GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESCE 128 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~lylV~E~~~ 128 (489)
.+.||+|+|+.|--+....||.+||||+++|. .......+.+|++++..+ .|+||++|+++|+++...|+|||-+.
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~ 159 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMR 159 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEeccc
Confidence 46899999999999999999999999999886 344567788999999888 59999999999999999999999999
Q ss_pred CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCC---EEEeeccCccccCCccccccCC
Q 011287 129 GGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH---IKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 129 gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~---ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
||.|+.+|+++..|+|.++..+..+|+.||.|||.+||.||||||||||.....+ +|||||.+..-+..... ..
T Consensus 160 GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~-~s-- 236 (463)
T KOG0607|consen 160 GGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND-CS-- 236 (463)
T ss_pred CchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCC-CC--
Confidence 9999999999999999999999999999999999999999999999999977654 89999998764432211 11
Q ss_pred CCCCCCccceecCCcCCChhhhc-----CCCCCCCCcchhhhHHHHHHhhCCCCCCCCC---------------HHHHHH
Q 011287 206 AASDDKACTFVGTAAYVPPEVLN-----SSPATFGNDLWALGCTLYQMLSGTSPFKDTS---------------EWLIFQ 265 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~~~~sDiwSLG~ilyelltG~~PF~~~~---------------~~~~~~ 265 (489)
-.......+.||++.|||||+.. ...|+.++|+||||||+|-||+|++||.+.- ...+|.
T Consensus 237 pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFe 316 (463)
T KOG0607|consen 237 PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFE 316 (463)
T ss_pred CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHH
Confidence 12234455789999999999873 3458999999999999999999999998632 255788
Q ss_pred HHHhcCCCCCC----CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcc
Q 011287 266 RIIARDIRFPN----YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWK 320 (489)
Q Consensus 266 ~i~~~~~~~p~----~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~ 320 (489)
.|..+.++||+ .+|.+++|||..+|..|+..|+++ .++++|||++.+.-+
T Consensus 317 sIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa-----~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 317 SIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSA-----AQVLNHPWVQRCAPE 370 (463)
T ss_pred HHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhh-----hhccCCccccccchh
Confidence 99999999997 489999999999999999999999 889999999987543
No 108
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-48 Score=379.00 Aligned_cols=256 Identities=31% Similarity=0.493 Sum_probs=230.9
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
..|...+.||+|+||.||+|.+..|++.||+|++.... .+...+.+..|+.+|..++++||.++|+.|-....++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 46788899999999999999999999999999997653 3455677889999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
|||.||++.+.++..+.++|..+..++.+++.||.|||..+.+|||||+.|||+..+|.+||+|||.+..+...
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~------ 164 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT------ 164 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeech------
Confidence 99999999999998877899999999999999999999999999999999999999999999999999876543
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCHHHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-RFPNYFSDAAR 283 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~~p~~~~~~~~ 283 (489)
..+..+|+||+.|||||++....|+.++||||||++.|||++|.+||....+...+..|.+..+ .+...+++.++
T Consensus 165 ----~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~k 240 (467)
T KOG0201|consen 165 ----VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFK 240 (467)
T ss_pred ----hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHH
Confidence 2344799999999999999988999999999999999999999999999888665555555433 34557899999
Q ss_pred HHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 284 DLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 284 ~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
+||..||+.||+.||+| .+|++|+|.+..
T Consensus 241 EFV~~CL~k~P~~RpsA-----~~LLKh~FIk~a 269 (467)
T KOG0201|consen 241 EFVEACLDKNPEFRPSA-----KELLKHKFIKRA 269 (467)
T ss_pred HHHHHHhhcCcccCcCH-----HHHhhhHHHHhc
Confidence 99999999999999999 899999999863
No 109
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.6e-45 Score=387.12 Aligned_cols=251 Identities=25% Similarity=0.402 Sum_probs=205.7
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC------CCCccEEEEEEEcC
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD------HPGVVRLFFTFQDT 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~------hpnIv~l~~~~~~~ 117 (489)
.++|++++.||+|+||+||+|.+..+++.||||++.+.. ........|+.+++.+. |+++++++++|...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 478999999999999999999999999999999986431 12233455666666654 45689999998764
Q ss_pred -CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCC-------------
Q 011287 118 -FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADG------------- 182 (489)
Q Consensus 118 -~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g------------- 182 (489)
..+|+|||++ |++|.+++.+.+.+++..++.++.||+.||+|||+ .||+||||||+|||++.++
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 5789999998 67999999888899999999999999999999998 5999999999999998765
Q ss_pred ---CEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC
Q 011287 183 ---HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259 (489)
Q Consensus 183 ---~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~ 259 (489)
.+||+|||.+.... .....++||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+
T Consensus 283 ~~~~vkl~DfG~~~~~~-------------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 283 DPCRVRICDLGGCCDER-------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred CCceEEECCCCccccCc-------------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 49999999875321 12335789999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHhcCCCCCC------------------------------------------CCCHHHHHHHHHhhccCCCCC
Q 011287 260 EWLIFQRIIARDIRFPN------------------------------------------YFSDAARDLIDRLLDVDPSGR 297 (489)
Q Consensus 260 ~~~~~~~i~~~~~~~p~------------------------------------------~~~~~~~~Li~~~L~~dP~~R 297 (489)
..+.+..+......+|. ..++.+.|||.+||+.||.+|
T Consensus 350 ~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R 429 (467)
T PTZ00284 350 NLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKR 429 (467)
T ss_pred hHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhC
Confidence 76655444322111110 013567899999999999999
Q ss_pred CCCCCCCHHHHhcCCCCCCC
Q 011287 298 PGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 298 ~t~~~~~~~~l~~hpff~~i 317 (489)
||+ +++++||||...
T Consensus 430 ~ta-----~e~L~Hp~~~~~ 444 (467)
T PTZ00284 430 LNA-----RQMTTHPYVLKY 444 (467)
T ss_pred CCH-----HHHhcCcccccc
Confidence 999 899999999853
No 110
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4e-45 Score=361.74 Aligned_cols=252 Identities=28% Similarity=0.435 Sum_probs=210.1
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcC-CCcEEEEEEeecccccchhHHHHHHHHHHHHHhC---CCCCccEEEEEEE-----
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFITKENKTAYVKLERIVLDQL---DHPGVVRLFFTFQ----- 115 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~-tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~----- 115 (489)
++|++.+.||+|+||.||+|++.. +|..||+|++........ ......+|..+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC-chHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 479999999999999999999864 578899999875433222 223344577777665 6999999999885
Q ss_pred cCCEEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCcc
Q 011287 116 DTFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVK 193 (489)
Q Consensus 116 ~~~~lylV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~ 193 (489)
....+|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 3456899999997 5899988764 358999999999999999999999999999999999999999999999999997
Q ss_pred ccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-
Q 011287 194 PMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI- 272 (489)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~- 272 (489)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+.....
T Consensus 159 ~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~ 227 (290)
T cd07862 159 IYSFQ-----------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 227 (290)
T ss_pred eccCC-----------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC
Confidence 64322 123355799999999999988899999999999999999999999999988877777654210
Q ss_pred ----C----------------------CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 273 ----R----------------------FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 273 ----~----------------------~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
. +...+++.+++||.+||+.||++||++ .++++||||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~-----~~~l~hp~f 290 (290)
T cd07862 228 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA-----YSALSHPYF 290 (290)
T ss_pred CChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCH-----HHHhcCCCC
Confidence 0 112467889999999999999999999 899999998
No 111
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2e-45 Score=377.90 Aligned_cols=258 Identities=28% Similarity=0.391 Sum_probs=218.6
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC-----EE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF-----SL 120 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~l 120 (489)
+|++++.||+|+||.||+|.+..+|+.||||.+.+... .......+.+|+.+++.++||||+++++++.+.. .+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc-chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 68999999999999999999999999999999865422 2233456778999999999999999999998776 79
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
|+||||+. ++|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~- 157 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE- 157 (372)
T ss_pred EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc-
Confidence 99999997 5899988888889999999999999999999999999999999999999999999999999997643221
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc---------
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR--------- 270 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~--------- 270 (489)
.......++|+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+....+..|...
T Consensus 158 --------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 229 (372)
T cd07853 158 --------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM 229 (372)
T ss_pred --------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 1112234689999999999774 4789999999999999999999999988877665554321
Q ss_pred --------------C---------CCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCc
Q 011287 271 --------------D---------IRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDW 319 (489)
Q Consensus 271 --------------~---------~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~ 319 (489)
. +.+....++++.+||.+||+.||++|||+ .++++||||.+..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~-----~e~l~hp~~~~~~~ 296 (372)
T cd07853 230 RSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISA-----ADALAHPYLDEGRL 296 (372)
T ss_pred HHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCH-----HHHhcCHhhCCCcc
Confidence 1 12234468899999999999999999999 89999999998654
No 112
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.9e-44 Score=360.12 Aligned_cols=280 Identities=37% Similarity=0.581 Sum_probs=237.4
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.++||||+++++.+.+...+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999987664433444556778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++...........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY 160 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence 99999999999988888999999999999999999999999999999999999999999999999998742211100000
Q ss_pred -----CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCC---
Q 011287 205 -----NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN--- 276 (489)
Q Consensus 205 -----~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~--- 276 (489)
............|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+.+..+.++.+.......|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (305)
T cd05609 161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDE 240 (305)
T ss_pred ccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccc
Confidence 000011112356888999999998888999999999999999999999999988888888887776555443
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQT 326 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~ 326 (489)
.++.++.++|.+||+.||++||++. +..++++||||.+.+|..+..+.
T Consensus 241 ~~~~~~~~li~~~l~~~P~~R~~~~--~~~~ll~~~~~~~~~~~~~~~~~ 288 (305)
T cd05609 241 ALPADAQDLISRLLRQNPLERLGTG--GAFEVKQHRFFLGLDWNGLLRQK 288 (305)
T ss_pred cCCHHHHHHHHHHhccChhhccCcc--CHHHHHhCccccCCCHHHHhhcC
Confidence 5789999999999999999999973 45899999999999999876443
No 113
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.4e-45 Score=364.80 Aligned_cols=257 Identities=24% Similarity=0.401 Sum_probs=215.8
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
.+++|.+.+.||+|+||.||+|+++.+++.||+|.+...... .......+|+.++++++||||+++++++.+....|+
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 81 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL 81 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC--CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence 468999999999999999999999999999999998754322 223345679999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 123 ALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
||||+++ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 82 VFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred EEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 9999975 888888765 458999999999999999999999999999999999999999999999999987543211
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc----------
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR---------- 270 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~---------- 270 (489)
.......+|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+....+...
T Consensus 159 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (309)
T cd07872 159 --------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWP 230 (309)
T ss_pred --------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Confidence 11224468999999999865 45788999999999999999999999988766554444321
Q ss_pred ---------CCCCC-----------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 271 ---------DIRFP-----------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 271 ---------~~~~p-----------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
...+| ..+++++++||.+||+.||.+|||+ +++++||||+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-----~e~l~h~~~~~~ 292 (309)
T cd07872 231 GISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISA-----EEAMKHAYFRSL 292 (309)
T ss_pred hhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCH-----HHHhcChhhhhc
Confidence 11112 2468899999999999999999999 899999999864
No 114
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.1e-44 Score=352.68 Aligned_cols=258 Identities=28% Similarity=0.489 Sum_probs=224.5
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccch--hHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE--NKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~--~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
++|++.+.||+|++|.||.|.+..+++.||+|.+........ .....+.+|+.++++++||||+++++++.+...+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 579999999999999999999999999999999875533222 234567889999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 123 ALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|+||+++++|.+++.+.+.+++..++.++.|++.||.|||+.||+||||+|+||+++.++.++|+|||+++.......
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~-- 159 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS-- 159 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc--
Confidence 999999999999999888899999999999999999999999999999999999999999999999999876533210
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--CCCCCCCCCH
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR--DIRFPNYFSD 280 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~--~~~~p~~~~~ 280 (489)
.........|+..|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+... ...+|..++.
T Consensus 160 -----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (263)
T cd06625 160 -----SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSP 234 (263)
T ss_pred -----ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCH
Confidence 011113456889999999999988999999999999999999999999887666655554433 4557788999
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.+.+||.+||..+|.+||++ .++++||||
T Consensus 235 ~~~~li~~~l~~~p~~Rpt~-----~~ll~~~~~ 263 (263)
T cd06625 235 DARNFLRRTFVENAKKRPSA-----EELLRHFFV 263 (263)
T ss_pred HHHHHHHHHhhcCcccCCCH-----HHHhhCCCC
Confidence 99999999999999999998 899999998
No 115
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-44 Score=370.62 Aligned_cols=254 Identities=23% Similarity=0.425 Sum_probs=211.2
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC----
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF---- 118 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 118 (489)
..++|++.+.||+|+||.||+|.+..+|+.||+|++.+... .......+.+|+.+++.++||||++++++|....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 35899999999999999999999999999999999976532 2333455668999999999999999999986543
Q ss_pred --EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 119 --SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 119 --~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
.+|+||||+.+ +|...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~ 174 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 174 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence 57999999976 67776653 58999999999999999999999999999999999999999999999999987532
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc------
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR------ 270 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~------ 270 (489)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 175 ~~-----------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 243 (359)
T cd07876 175 TN-----------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 243 (359)
T ss_pred cC-----------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcH
Confidence 21 1223457899999999999999999999999999999999999999987765443332211
Q ss_pred ----------------CCCC--------------------CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 271 ----------------DIRF--------------------PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 271 ----------------~~~~--------------------p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
...+ +...++++++||.+||+.||++|||+ .++++||||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~-----~e~l~hp~~ 318 (359)
T cd07876 244 EFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISV-----DEALRHPYI 318 (359)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCH-----HHHhcCchh
Confidence 1111 11246789999999999999999999 899999999
Q ss_pred CC
Q 011287 315 KG 316 (489)
Q Consensus 315 ~~ 316 (489)
..
T Consensus 319 ~~ 320 (359)
T cd07876 319 TV 320 (359)
T ss_pred hh
Confidence 74
No 116
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=6.7e-45 Score=358.11 Aligned_cols=261 Identities=33% Similarity=0.602 Sum_probs=226.9
Q ss_pred EeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCCCh
Q 011287 53 YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGEL 132 (489)
Q Consensus 53 LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L 132 (489)
||+|+||+||+|.+..+|+.||+|++.+...........+..|..+++.++||||++++++|......|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999999999999999999876444444455566799999999999999999999999999999999999999
Q ss_pred HHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCC
Q 011287 133 FDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDD 210 (489)
Q Consensus 133 ~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~ 210 (489)
.+++.+.+ .+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||.+...... .
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-----------~ 149 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-----------K 149 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC-----------C
Confidence 99998765 7999999999999999999999999999999999999999999999999998754321 1
Q ss_pred CccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH----HHHHHHHHhcCCCCCCCCCHHHHHHH
Q 011287 211 KACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE----WLIFQRIIARDIRFPNYFSDAARDLI 286 (489)
Q Consensus 211 ~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~Li 286 (489)
......++..|+|||++.+..++.++|+|||||++|+|++|+.||..... ..+...+......+|..+++.+.++|
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 229 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLC 229 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHH
Confidence 12234678899999999888899999999999999999999999987644 33334444556667788999999999
Q ss_pred HHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 287 DRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 287 ~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
++||+.||.+||+..+.+..++++||||..++|..+..
T Consensus 230 ~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~ 267 (277)
T cd05577 230 EALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEA 267 (277)
T ss_pred HHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhc
Confidence 99999999999988777789999999999999987743
No 117
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.1e-44 Score=353.07 Aligned_cols=257 Identities=39% Similarity=0.738 Sum_probs=231.0
Q ss_pred EeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCCCh
Q 011287 53 YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGEL 132 (489)
Q Consensus 53 LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L 132 (489)
||.|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++.+.+...+|+||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999999999999999999876555455567788899999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCc
Q 011287 133 FDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212 (489)
Q Consensus 133 ~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~ 212 (489)
.+++.+...+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....... ..
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-----------~~ 149 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-----------KT 149 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----------cc
Confidence 9999988889999999999999999999999999999999999999999999999999988654321 22
Q ss_pred cceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC--HHHHHHHHH--hcCCCCCCCCCHHHHHHHHH
Q 011287 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS--EWLIFQRII--ARDIRFPNYFSDAARDLIDR 288 (489)
Q Consensus 213 ~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~--~~~~~~~i~--~~~~~~p~~~~~~~~~Li~~ 288 (489)
....|+..|+|||.+.+..++.++|+|||||++|+|++|..||.... .....+.+. .....+|...++++.++|.+
T Consensus 150 ~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 229 (262)
T cd05572 150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQ 229 (262)
T ss_pred ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHH
Confidence 34578999999999988889999999999999999999999998877 666777777 45677888889999999999
Q ss_pred hhccCCCCCCCCCCCCHHHHhcCCCCCCCCcc
Q 011287 289 LLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWK 320 (489)
Q Consensus 289 ~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~ 320 (489)
||+.||++||+..+.+++++++||||++.+|+
T Consensus 230 ~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 230 LLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred HccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 99999999999666677999999999999986
No 118
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.4e-44 Score=357.34 Aligned_cols=251 Identities=26% Similarity=0.406 Sum_probs=208.7
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC---CCCCccEEEEEEEc-----C
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL---DHPGVVRLFFTFQD-----T 117 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~-----~ 117 (489)
+|++.+.||+|+||+||+|+++.+|+.||+|.+....... .......+|..+++.+ +||||+++++++.+ .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 5899999999999999999999999999999987543222 2223344577766655 79999999998864 3
Q ss_pred CEEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCcccc
Q 011287 118 FSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPM 195 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~ 195 (489)
..+++||||+.+ +|.+++.+. ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 468999999985 898888764 34899999999999999999999999999999999999999999999999998765
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC----
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD---- 271 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~---- 271 (489)
... .......||..|+|||++.+..++.++|||||||++|+|++|++||.+.+....+.++....
T Consensus 159 ~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd07863 159 SCQ-----------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 227 (288)
T ss_pred cCc-----------ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCC
Confidence 321 11224578999999999998889999999999999999999999999888776666654310
Q ss_pred -------C----------------CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 -------I----------------RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 -------~----------------~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
. .+.+.++.++.+||.+||+.||++||++ .+++.||||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~~~l~hp~f 288 (288)
T cd07863 228 EDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISA-----FRALQHPFF 288 (288)
T ss_pred hhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCH-----HHHhcCCCC
Confidence 0 0112467889999999999999999999 899999998
No 119
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.6e-44 Score=354.54 Aligned_cols=264 Identities=34% Similarity=0.588 Sum_probs=222.4
Q ss_pred EEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHH---HHHhCCCCCccEEEEEEEcCCEEEEEEeccC
Q 011287 52 IYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI---VLDQLDHPGVVRLFFTFQDTFSLYMALESCE 128 (489)
Q Consensus 52 ~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~---il~~l~hpnIv~l~~~~~~~~~lylV~E~~~ 128 (489)
+||+|+||.||+|.+..+++.||+|.+.+..............|.. .++...||+|+++++.|.+...+|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999999999999999998765443332222333433 3444689999999999999999999999999
Q ss_pred CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCC
Q 011287 129 GGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208 (489)
Q Consensus 129 gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~ 208 (489)
||+|.+++.+.+.+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||++..+...
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---------- 150 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---------- 150 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc----------
Confidence 9999999988888999999999999999999999999999999999999999999999999998754321
Q ss_pred CCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCC---CHHHHHHHHHhcCCCCCCCCCHHHHH
Q 011287 209 DDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDT---SEWLIFQRIIARDIRFPNYFSDAARD 284 (489)
Q Consensus 209 ~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~---~~~~~~~~i~~~~~~~p~~~~~~~~~ 284 (489)
.....+|+..|+|||++.+. .++.++|+||+||++|+|++|+.||.+. ........+......+|..++.++.+
T Consensus 151 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 228 (278)
T cd05606 151 --KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRS 228 (278)
T ss_pred --CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHH
Confidence 12245799999999999754 5889999999999999999999999876 44444445555667788889999999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCCC
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQTP 327 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~ 327 (489)
+|.+||..||.+||......+.++++||||++++|..+.....
T Consensus 229 li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 271 (278)
T cd05606 229 LLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQKY 271 (278)
T ss_pred HHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHhhhccc
Confidence 9999999999999966545569999999999999998765543
No 120
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.9e-44 Score=369.39 Aligned_cols=254 Identities=24% Similarity=0.405 Sum_probs=213.4
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC-----
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT----- 117 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 117 (489)
..++|++.+.||+|+||.||+|.+..+++.||||++.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC-chhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 368999999999999999999999999999999999765322 23345566799999999999999999988643
Q ss_pred -CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 118 -FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 118 -~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
..+|+||||+.+ +|...+.. .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 357999999975 78777764 48999999999999999999999999999999999999999999999999997543
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC----
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI---- 272 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~---- 272 (489)
.. .......||..|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.+++....
T Consensus 178 ~~-----------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 246 (364)
T cd07875 178 TS-----------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246 (364)
T ss_pred CC-----------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 21 122345789999999999999999999999999999999999999998887776665543100
Q ss_pred ------------------C--------------C------CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 273 ------------------R--------------F------PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 273 ------------------~--------------~------p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
. + +...+..+++||.+||+.||.+|||+ .++++||||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~-----~e~L~hp~~ 321 (364)
T cd07875 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV-----DEALQHPYI 321 (364)
T ss_pred HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCH-----HHHhcCccc
Confidence 0 0 01135678999999999999999999 899999999
Q ss_pred CC
Q 011287 315 KG 316 (489)
Q Consensus 315 ~~ 316 (489)
..
T Consensus 322 ~~ 323 (364)
T cd07875 322 NV 323 (364)
T ss_pred cc
Confidence 73
No 121
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-44 Score=364.79 Aligned_cols=256 Identities=26% Similarity=0.450 Sum_probs=218.2
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
..++|++.+.||+|+||.||+|++..++..+|+|++.... .......+.+|+.+++.++||||++++++|.+...+|+
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence 4589999999999999999999999999999999986542 23345567889999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 123 ALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM-GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~-gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
||||+.+|+|.+++.+.+.+++..+..++.|++.||.|||+. +|+||||||+|||++.+|.+||+|||++..+...
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--- 157 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 157 (333)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh---
Confidence 999999999999999888899999999999999999999985 7999999999999999999999999998754321
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHH---------------
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQR--------------- 266 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~--------------- 266 (489)
......||..|+|||++.+..++.++|+|||||++|+|++|+.||...........
T Consensus 158 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (333)
T cd06650 158 ---------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETS 228 (333)
T ss_pred ---------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccC
Confidence 12345789999999999988899999999999999999999999986554332211
Q ss_pred -----------------------------HHhc-CCCCC-CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 267 -----------------------------IIAR-DIRFP-NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 267 -----------------------------i~~~-~~~~p-~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
+... ...++ ..++.++++||.+||+.||++||++ .+++.||||+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~-----~ell~h~~~~ 303 (333)
T cd06650 229 PRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADL-----KQLMVHAFIK 303 (333)
T ss_pred cccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCH-----HHHhhCHHHh
Confidence 1111 11122 1367899999999999999999998 8999999997
Q ss_pred CC
Q 011287 316 GI 317 (489)
Q Consensus 316 ~i 317 (489)
..
T Consensus 304 ~~ 305 (333)
T cd06650 304 RS 305 (333)
T ss_pred cC
Confidence 53
No 122
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.1e-44 Score=371.73 Aligned_cols=258 Identities=21% Similarity=0.330 Sum_probs=215.1
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEc--CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKI--DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~--~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
..+|++++.||+|+||.||+|... .++..||+|.+... ....+|+.+|+.++||||++++++|.....+|
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 457999999999999999999864 45788999987543 22457999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 122 MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
+|||++. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.+....
T Consensus 163 lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~-- 239 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP-- 239 (392)
T ss_pred EEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccc--
Confidence 9999996 5899999877889999999999999999999999999999999999999999999999999997654321
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH---HHHHHHHHh----cC---
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE---WLIFQRIIA----RD--- 271 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~---~~~~~~i~~----~~--- 271 (489)
.......++||+.|+|||++.+..++.++|||||||++|+|++|+.||.+... ...+..+.. ..
T Consensus 240 ------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~ 313 (392)
T PHA03207 240 ------DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEF 313 (392)
T ss_pred ------ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcccc
Confidence 11222356899999999999999999999999999999999999999976432 122222221 00
Q ss_pred ----------------------CCCC-----CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCccccc
Q 011287 272 ----------------------IRFP-----NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIR 323 (489)
Q Consensus 272 ----------------------~~~p-----~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~ 323 (489)
+..| ..++.++.+||.+||..||++||++ .+++.||||....|+.++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa-----~e~l~~p~f~~~~~~~~~ 387 (392)
T PHA03207 314 PQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSA-----QDILSLPLFTKEPINLLN 387 (392)
T ss_pred CCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCH-----HHHhhCchhhccchhhhc
Confidence 1111 1356789999999999999999999 899999999988887664
No 123
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.5e-44 Score=366.11 Aligned_cols=254 Identities=22% Similarity=0.394 Sum_probs=211.6
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC-----
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT----- 117 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~----- 117 (489)
..++|++.+.||+|+||.||+|.+..+++.||+|++.+.... ......+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC-hHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 368999999999999999999999999999999998764322 23345566799999999999999999998643
Q ss_pred -CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 118 -FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 118 -~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
..+|+||||+++ +|.+.+.. .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 357999999976 67777754 48999999999999999999999999999999999999999999999999997543
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-----
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD----- 271 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~----- 271 (489)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 171 ~~-----------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (355)
T cd07874 171 TS-----------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239 (355)
T ss_pred Cc-----------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 21 12234679999999999999999999999999999999999999999877655443332210
Q ss_pred ----------------------CC---------------CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 ----------------------IR---------------FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 ----------------------~~---------------~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.. .+...+.++++||.+||+.||++|||+ .++++||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~-----~ell~hp~~ 314 (355)
T cd07874 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV-----DEALQHPYI 314 (355)
T ss_pred HHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCH-----HHHhcCcch
Confidence 00 112235678999999999999999999 899999999
Q ss_pred CC
Q 011287 315 KG 316 (489)
Q Consensus 315 ~~ 316 (489)
..
T Consensus 315 ~~ 316 (355)
T cd07874 315 NV 316 (355)
T ss_pred hc
Confidence 74
No 124
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.9e-45 Score=354.04 Aligned_cols=252 Identities=38% Similarity=0.675 Sum_probs=215.9
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEec
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALES 126 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~ 126 (489)
|++++.||+|+||+||+|++..+++.||+|++......... .....+|..++++++||||+++++++.+...+++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-cchhhhhhhccccccccccccccccccccccccccccc
Confidence 89999999999999999999999999999999876443333 22334599999999999999999999999999999999
Q ss_pred cCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCC
Q 011287 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNA 206 (489)
Q Consensus 127 ~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~ 206 (489)
+.+++|.+++.+.+.+++..+..++.||+.||.+||++||+||||||+||+++.++.++|+|||.+..+..
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--------- 150 (260)
T PF00069_consen 80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE--------- 150 (260)
T ss_dssp ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS---------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---------
Confidence 99999999999778899999999999999999999999999999999999999999999999999875411
Q ss_pred CCCCCccceecCCcCCChhhhc-CCCCCCCCcchhhhHHHHHHhhCCCCCCCCC---HHHHHHHHHhcCCCCC----CCC
Q 011287 207 ASDDKACTFVGTAAYVPPEVLN-SSPATFGNDLWALGCTLYQMLSGTSPFKDTS---EWLIFQRIIARDIRFP----NYF 278 (489)
Q Consensus 207 ~~~~~~~~~~gt~~Y~aPE~l~-~~~~~~~sDiwSLG~ilyelltG~~PF~~~~---~~~~~~~i~~~~~~~p----~~~ 278 (489)
.........++..|+|||++. +..++.++|+||||+++|+|++|..||...+ ......+........+ ...
T Consensus 151 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (260)
T PF00069_consen 151 -NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREK 229 (260)
T ss_dssp -TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTS
T ss_pred -cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchh
Confidence 122334567899999999998 7889999999999999999999999999873 3334444433222211 122
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
+.++.++|.+||+.||++||++ .++++||||
T Consensus 230 ~~~l~~li~~~l~~~p~~R~~~-----~~l~~~~~~ 260 (260)
T PF00069_consen 230 SEELRDLIKKMLSKDPEQRPSA-----EELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHHHSSSSGGGSTTH-----HHHHTSGGG
T ss_pred HHHHHHHHHHHccCChhHCcCH-----HHHhcCCCC
Confidence 4899999999999999999998 999999998
No 125
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=364.41 Aligned_cols=251 Identities=29% Similarity=0.476 Sum_probs=219.5
Q ss_pred CCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcE-EEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Q 011287 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTV-YALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD 116 (489)
Q Consensus 38 ~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~-vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 116 (489)
+.......+..+.+.||.|+||+||+|.+. |.. ||+|++......... ...+.+|+.+|.+++|||||++++++.+
T Consensus 34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~ 110 (362)
T KOG0192|consen 34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTS 110 (362)
T ss_pred cceecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 444556678888889999999999999995 455 999999876544444 7789999999999999999999999998
Q ss_pred CC-EEEEEEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-cEeeccCCCCeeeCCCC-CEEEeeccC
Q 011287 117 TF-SLYMALESCEGGELFDQITS--KGHLSEDEARFYTAEVVDALEYIHSMG-LIHRDIKPENLLLTADG-HIKIADFGS 191 (489)
Q Consensus 117 ~~-~lylV~E~~~gg~L~~~l~~--~~~l~e~~~~~i~~qil~aL~~LH~~g-IiHrDLKpeNILl~~~g-~ikL~DFG~ 191 (489)
.. .+.+||||+++|+|.+++.+ .+.++...+..++.||+.|++|||+++ ||||||||+|||++.++ ++||+|||+
T Consensus 111 ~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGl 190 (362)
T KOG0192|consen 111 PPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGL 190 (362)
T ss_pred CCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcc
Confidence 87 79999999999999999988 578999999999999999999999999 99999999999999998 999999999
Q ss_pred ccccCCccccccCCCCCCCCccceecCCcCCChhhhc--CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh
Q 011287 192 VKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLN--SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA 269 (489)
Q Consensus 192 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~--~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~ 269 (489)
++...... .......||..|||||++. ...|+.++||||||+++|||+||+.||.+.........+..
T Consensus 191 sr~~~~~~----------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~ 260 (362)
T KOG0192|consen 191 SREKVISK----------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVV 260 (362)
T ss_pred ceeecccc----------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 98654321 1222368999999999999 66899999999999999999999999999988666555543
Q ss_pred --cCCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 270 --RDIRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 270 --~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
..+.+|..+++.+..|+.+|+..||.+||+..
T Consensus 261 ~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ 294 (362)
T KOG0192|consen 261 GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFL 294 (362)
T ss_pred cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHH
Confidence 44667888999999999999999999999883
No 126
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=3.4e-44 Score=349.21 Aligned_cols=254 Identities=40% Similarity=0.701 Sum_probs=219.9
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHH-HhCCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVL-DQLDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il-~~l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+.||.|+||.||+|.+..+|+.||+|++.+...........+..|..++ ...+||||+++++++.+...+|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5789999999999999999999999999765433333333344455444 455899999999999999999999999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
++|.+++...+.+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------------ 149 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------------ 149 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------------
Confidence 99999999888899999999999999999999999999999999999999999999999999874321
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCC----CCCCHHHHHH
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFP----NYFSDAARDL 285 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~L 285 (489)
.....|+..|+|||.+.+..++.++|+||||+++|+|++|.+||...+....+..+......++ ..+++.+.++
T Consensus 150 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (260)
T cd05611 150 --NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDL 227 (260)
T ss_pred --cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHH
Confidence 2245688999999999888889999999999999999999999999888888777766554433 3578999999
Q ss_pred HHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcc
Q 011287 286 IDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWK 320 (489)
Q Consensus 286 i~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~ 320 (489)
|.+||+.||++||++. ++++++.||||..++|+
T Consensus 228 i~~~l~~~p~~R~~~~--~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 228 INRLLCMDPAKRLGAN--GYQEIKSHPFFKSINWD 260 (260)
T ss_pred HHHHccCCHHHccCCC--cHHHHHcChHhhcCCCC
Confidence 9999999999999984 46899999999999995
No 127
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.9e-44 Score=352.45 Aligned_cols=269 Identities=49% Similarity=0.873 Sum_probs=240.2
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCCEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~lylV 123 (489)
++|++.+.||.|+||.||+|++..+|+.||+|++.+..+........+.+|..++++++ ||||+++++++.+...+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 58999999999999999999999999999999998866666666677888999999998 99999999999999999999
Q ss_pred EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||++++++|.+++.+.+.+++..+..++.|++.||.+||++|++|+||+|+||+++.+|+++|+|||++...........
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~ 160 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES 160 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence 99999999999999988999999999999999999999999999999999999999999999999999987654331100
Q ss_pred C----------CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC
Q 011287 204 P----------NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR 273 (489)
Q Consensus 204 ~----------~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~ 273 (489)
. ..........+.|+..|+|||++....++.++|+|||||+++++++|+.||...+....++.+......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 240 (280)
T cd05581 161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYS 240 (280)
T ss_pred CCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCC
Confidence 0 000113344668899999999998888999999999999999999999999999988888888888889
Q ss_pred CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 274 FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 274 ~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
+|..+++.+.+||++||+.||++||++.+ ++.++++||||
T Consensus 241 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~-~~~~ll~~~~~ 280 (280)
T cd05581 241 FPPNFPPDAKDLIEKLLVLDPQDRLGVNE-GYDELKAHPFF 280 (280)
T ss_pred CCCccCHHHHHHHHHHhcCCHhhCCCccc-CHHHHhcCCCC
Confidence 99999999999999999999999999965 67899999998
No 128
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.4e-44 Score=365.52 Aligned_cols=253 Identities=25% Similarity=0.442 Sum_probs=211.3
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC------
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT------ 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 117 (489)
.++|++++.||+|+||.||+|.+..+++.||+|++.+.... ......+.+|+.+++.++||||++++++|...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS-LIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh-hHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 47899999999999999999999999999999998764322 22334466799999999999999999888643
Q ss_pred CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 118 FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
...|++++++ +++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 170 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD 170 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence 4579999998 6789877754 5799999999999999999999999999999999999999999999999999975432
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-----
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD----- 271 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~----- 271 (489)
....++||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+....
T Consensus 171 -------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07878 171 -------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSP 237 (343)
T ss_pred -------------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 2235679999999999876 568899999999999999999999998877655554443210
Q ss_pred ------------------CCCC--------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 272 ------------------IRFP--------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 272 ------------------~~~p--------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
...| ...++.+.+||.+||+.||.+|||+ .++++||||...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~-----~ell~hp~~~~~ 304 (343)
T cd07878 238 EVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISA-----SEALAHPYFSQY 304 (343)
T ss_pred HHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCH-----HHHhcCcchhcc
Confidence 0011 2356778999999999999999999 899999999864
No 129
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=8e-44 Score=354.83 Aligned_cols=258 Identities=23% Similarity=0.406 Sum_probs=216.3
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
.+++|++.+.||+|+||.||+|++..+++.||+|.+...... .....+.+|+.+++.++||||+++++++.+...+|+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc--CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 478999999999999999999999999999999998654322 223346679999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 123 ALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
||||+. ++|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 82 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 82 VFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred EEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 999997 4898888764 568999999999999999999999999999999999999999999999999987543211
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc----------
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR---------- 270 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~---------- 270 (489)
.......+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+....+...
T Consensus 159 --------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (301)
T cd07873 159 --------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWP 230 (301)
T ss_pred --------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhch
Confidence 112234678999999998654 4788999999999999999999999988766554443321
Q ss_pred ---------CCCCC-----------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 271 ---------DIRFP-----------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 271 ---------~~~~p-----------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
...+| ..+++.+++||.+||+.||.+|||+ +++++||||+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~-----~eil~h~~f~~~~ 293 (301)
T cd07873 231 GILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISA-----EEAMKHPYFHCLG 293 (301)
T ss_pred hhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCH-----HHHhcCccccccc
Confidence 11112 2468899999999999999999998 8999999998654
No 130
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-45 Score=345.64 Aligned_cols=251 Identities=32% Similarity=0.523 Sum_probs=217.5
Q ss_pred CCCCeEEe-eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHH-hCCCCCccEEEEEEE----c
Q 011287 43 SIQDFELG-KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD-QLDHPGVVRLFFTFQ----D 116 (489)
Q Consensus 43 ~~~dy~~~-~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~-~l~hpnIv~l~~~~~----~ 116 (489)
..+||.+. .+||-|-.|.|..+.++.||+.||+|++.-. ....+|+++.- .-.|||||+++++|+ .
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 45788765 5789999999999999999999999987422 23445766543 347999999998886 4
Q ss_pred CCEEEEEEeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC---CCEEEeeccC
Q 011287 117 TFSLYMALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD---GHIKIADFGS 191 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~~~--l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~---g~ikL~DFG~ 191 (489)
..++.+|||.++||+|+..|+.+|. |+|.++..++.||..|+.|||+.+|.||||||||+|...+ ..+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 5679999999999999999998876 9999999999999999999999999999999999999754 4799999999
Q ss_pred ccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH----HHHHHHH
Q 011287 192 VKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE----WLIFQRI 267 (489)
Q Consensus 192 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~----~~~~~~i 267 (489)
|+.-.. .....+.|-|+.|+|||++....|+..+|+||||||+|-||+|.+||....- ..+..+|
T Consensus 211 AK~t~~-----------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI 279 (400)
T KOG0604|consen 211 AKETQE-----------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRI 279 (400)
T ss_pred ccccCC-----------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHh
Confidence 996432 2334567899999999999999999999999999999999999999976433 4577889
Q ss_pred HhcCCCCCC----CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 268 IARDIRFPN----YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 268 ~~~~~~~p~----~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
..+.+.||. .+|.+++|+|++||..+|.+|+|+ .++++|||..+.
T Consensus 280 ~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI-----~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 280 RTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTI-----EEVMDHPWINQY 328 (400)
T ss_pred hccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeH-----HHhhcCchhccc
Confidence 999999996 479999999999999999999999 889999999754
No 131
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.6e-43 Score=343.33 Aligned_cols=253 Identities=27% Similarity=0.560 Sum_probs=220.3
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc-CCEEEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD-TFSLYMAL 124 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~lylV~ 124 (489)
+|++.+.||+|++|.||+|+++.+++.||+|.+....... .....+.+|..+++.++|||++++++.+.. ...+|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR-RERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH-HHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 5999999999999999999999999999999987543332 234457779999999999999999998864 45689999
Q ss_pred eccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 125 ESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 125 E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
||+++++|.+++... ..+++.++..++.|++.||.+||++|++||||||+||+++.++.++|+|||++..+....
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~--- 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC--- 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC---
Confidence 999999999988763 458999999999999999999999999999999999999999999999999987653321
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCHH
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-RFPNYFSDA 281 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~~p~~~~~~ 281 (489)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+..+.. ..|..++++
T Consensus 157 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (257)
T cd08223 157 -------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPE 229 (257)
T ss_pred -------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHH
Confidence 122355789999999999999899999999999999999999999998887776666666544 466778999
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 282 ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 282 ~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
+.+||.+||+.||++||++ .++++||||
T Consensus 230 ~~~li~~~l~~~p~~Rp~~-----~~~l~~~~~ 257 (257)
T cd08223 230 LGELIATMLSKRPEKRPSV-----KSILRQPYI 257 (257)
T ss_pred HHHHHHHHhccCcccCCCH-----HHHhcCCCC
Confidence 9999999999999999998 899999997
No 132
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.1e-43 Score=346.86 Aligned_cols=260 Identities=28% Similarity=0.513 Sum_probs=224.1
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccch------hHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE------NKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~------~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
+|.+++.||.|+||.||+|.+..+++.||+|.+........ .....+.+|+.+++.++||||+++++++.+...
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 47889999999999999999999999999999876543321 233567889999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
.++||||+++++|.+++.+.+.+++..++.++.|++.||+|||++|++||||+|+||+++.++.++|+|||.++......
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 99999999999999999988889999999999999999999999999999999999999999999999999998765321
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh-cCCCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA-RDIRFPNYF 278 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~-~~~~~p~~~ 278 (489)
... ........+.|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+.+.......+.. ....+|..+
T Consensus 161 ~~~----~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (267)
T cd06628 161 LST----KTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNI 236 (267)
T ss_pred ccC----CccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCccc
Confidence 110 001122345689999999999988899999999999999999999999998776555554443 344677889
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
+..+.++|++||+.||.+||++ .++++||||
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~ 267 (267)
T cd06628 237 SSEAIDFLEKTFEIDHNKRPTA-----AELLKHPFL 267 (267)
T ss_pred CHHHHHHHHHHccCCchhCcCH-----HHHhhCCCC
Confidence 9999999999999999999998 899999998
No 133
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.8e-44 Score=347.15 Aligned_cols=255 Identities=36% Similarity=0.644 Sum_probs=227.2
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||.|+||.||+|++..+++.||+|++.+...........+.+|+.++++++||||+++++.+.+...+|+|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 58999999999999999999999999999999987655554566778889999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 126 SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
|+.|++|.+++.+.+.+++..+..++.||+.||.|||++|++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~------ 154 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT------ 154 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc------
Confidence 99999999999887789999999999999999999999999999999999999999999999999987653321
Q ss_pred CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC---HHHHHHHHHhcCCCCCCCCCHHH
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS---EWLIFQRIIARDIRFPNYFSDAA 282 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~---~~~~~~~i~~~~~~~p~~~~~~~ 282 (489)
......|+..|+|||.+....++.++|+|||||++|+|++|..||...+ ...+.+........+|..++.++
T Consensus 155 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (258)
T cd05578 155 -----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEA 229 (258)
T ss_pred -----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHH
Confidence 1224568889999999998889999999999999999999999998876 34444444446677888899999
Q ss_pred HHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 283 RDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 283 ~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.++|.+||+.||.+||++. ..++++||||
T Consensus 230 ~~~i~~~l~~~p~~R~~~~---~~~l~~~~~~ 258 (258)
T cd05578 230 IDAINKLLERDPQKRLGDN---LKDLKNHPYF 258 (258)
T ss_pred HHHHHHHccCChhHcCCcc---HHHHhcCCCC
Confidence 9999999999999999983 5789999998
No 134
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=8.6e-44 Score=352.93 Aligned_cols=261 Identities=31% Similarity=0.525 Sum_probs=223.8
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
+.|++++.||.|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++.+......|+||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 5699999999999999999999999999999998654 3334566777999999999999999999999999999999
Q ss_pred eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||+++++|..++.+ ...+++..+..++.||+.||.|||+.|++||||||+||+++.++.++|+|||++......
T Consensus 89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~----- 163 (292)
T cd06644 89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT----- 163 (292)
T ss_pred ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc-----
Confidence 99999999887765 456899999999999999999999999999999999999999999999999988653221
Q ss_pred CCCCCCCCccceecCCcCCChhhhc-----CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC---CCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLN-----SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD---IRFP 275 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~---~~~p 275 (489)
........++..|+|||++. ...++.++|+|||||++|+|++|.+||...+......++.... ...|
T Consensus 164 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T cd06644 164 -----LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQP 238 (292)
T ss_pred -----ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCC
Confidence 11223557889999999984 3446788999999999999999999998877766655554432 2345
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCccccc
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIR 323 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~ 323 (489)
..++.++.++|.+||+.||++||++ .++++||||..++|....
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~~~~~~~~ 281 (292)
T cd06644 239 SKWSMEFRDFLKTALDKHPETRPSA-----AQLLEHPFVSSVTSNRPL 281 (292)
T ss_pred cccCHHHHHHHHHHhcCCcccCcCH-----HHHhcCccccccccchhH
Confidence 6788999999999999999999998 899999999999887643
No 135
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.1e-43 Score=345.04 Aligned_cols=263 Identities=42% Similarity=0.720 Sum_probs=230.5
Q ss_pred EeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCCCh
Q 011287 53 YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGEL 132 (489)
Q Consensus 53 LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L 132 (489)
||.|+||.||+|.+..+|+.||+|++.+...........+.+|..++++++||||+++++.+.+....|+||||+.+++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999999999999999776554445667788899999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCc
Q 011287 133 FDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212 (489)
Q Consensus 133 ~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~ 212 (489)
.+++.+.+.+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++........... .......
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~ 158 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL--NDDEKED 158 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc--ccccccc
Confidence 99999888899999999999999999999999999999999999999999999999999875432211000 0001122
Q ss_pred cceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHhh
Q 011287 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYF--SDAARDLIDRLL 290 (489)
Q Consensus 213 ~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~--~~~~~~Li~~~L 290 (489)
....++..|+|||.+....++.++|+|||||++|+|++|..||........+..+......+|... +..+.++|.+||
T Consensus 159 ~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 238 (265)
T cd05579 159 KRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLL 238 (265)
T ss_pred cCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHh
Confidence 345788999999999888899999999999999999999999999998888888888777777766 999999999999
Q ss_pred ccCCCCCCCCCCCCHHHHhcCCCCCCCCc
Q 011287 291 DVDPSGRPGAGPGGYAVLKMHPFFKGIDW 319 (489)
Q Consensus 291 ~~dP~~R~t~~~~~~~~l~~hpff~~i~~ 319 (489)
+.+|.+||++. .+.++++||||++++|
T Consensus 239 ~~~p~~Rpt~~--~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 239 VPDPEKRLGAK--SIEEIKNHPFFKGIDW 265 (265)
T ss_pred cCCHhhcCCCc--cHHHHhcCccccCCCC
Confidence 99999999984 4688999999999998
No 136
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=6.1e-44 Score=361.65 Aligned_cols=249 Identities=24% Similarity=0.394 Sum_probs=204.3
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEE-----cCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKK-----IDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQ 115 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~-----~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 115 (489)
+..++|++++.||+|+||.||+|.+ ..++..||+|++.... .......+.+|+.++..+ +||||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 4457999999999999999999985 2456789999986532 223345677899999999 8999999999887
Q ss_pred cC-CEEEEEEeccCCCChHHHHHhC-------------------------------------------------------
Q 011287 116 DT-FSLYMALESCEGGELFDQITSK------------------------------------------------------- 139 (489)
Q Consensus 116 ~~-~~lylV~E~~~gg~L~~~l~~~------------------------------------------------------- 139 (489)
.. ..+|+|||||++|+|.+++...
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 54 4689999999999999998753
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCc
Q 011287 140 -------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212 (489)
Q Consensus 140 -------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~ 212 (489)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ....
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~--------~~~~ 233 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--------YVRK 233 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc--------hhcc
Confidence 2377889999999999999999999999999999999999999999999999986532210 1112
Q ss_pred cceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHH-HHHHhc-CCCCCCCCCHHHHHHHHHh
Q 011287 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIF-QRIIAR-DIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 213 ~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~-~~i~~~-~~~~p~~~~~~~~~Li~~~ 289 (489)
.+..++..|+|||++.+..++.++|||||||++|+|++ |..||.+......+ +.+... ....|...++++.+||.+|
T Consensus 234 ~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 313 (338)
T cd05102 234 GSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLAC 313 (338)
T ss_pred cCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence 23456788999999999999999999999999999997 99999886543333 333332 3456778899999999999
Q ss_pred hccCCCCCCCC
Q 011287 290 LDVDPSGRPGA 300 (489)
Q Consensus 290 L~~dP~~R~t~ 300 (489)
|+.||.+||++
T Consensus 314 l~~dp~~RPs~ 324 (338)
T cd05102 314 WQGDPKERPTF 324 (338)
T ss_pred ccCChhhCcCH
Confidence 99999999998
No 137
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.2e-43 Score=353.18 Aligned_cols=253 Identities=28% Similarity=0.468 Sum_probs=216.4
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|++..++..||+|.+.... .......+.+|+.+++.++||||+++++.|.+...+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 47999999999999999999999999999999986542 2334556778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||+++++|.+++.+.+.+++..++.++.|++.||.|||+ .+++||||||+|||++.++.++|+|||++......
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~----- 153 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----- 153 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc-----
Confidence 999999999999988889999999999999999999997 69999999999999999999999999998654221
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-------------
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR------------- 270 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~------------- 270 (489)
....++|+..|+|||.+.+..++.++|+|||||++|+|++|+.||...+.......+...
T Consensus 154 -------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 154 -------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred -------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccc
Confidence 123567899999999998888999999999999999999999999765543332222110
Q ss_pred ------------------------CCCCC-CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 271 ------------------------DIRFP-NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 271 ------------------------~~~~p-~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
....| ..++.++++||.+||..||++||++ .++++||||.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~ll~~~~~~~ 292 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADL-----KELTKHPFIKR 292 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCH-----HHHhcChhhhh
Confidence 11112 1367889999999999999999998 89999999975
No 138
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.7e-43 Score=347.81 Aligned_cols=270 Identities=37% Similarity=0.710 Sum_probs=231.1
Q ss_pred CeEEeeEEeeeCceEEEEEEEc---CCCcEEEEEEeeccccc-chhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFIT-KENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~---~tg~~vAiK~~~k~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~l 120 (489)
+|++.+.||.|+||.||+|++. .+|..||+|++...... .......+.+|+.+++.+ +|+||+++++.|+....+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 5899999999999999999985 47999999998764332 223345677899999999 699999999999999999
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
|+||||+++++|.+++...+.+++..+..++.||+.||.|||+.|++||||+|+|||++.+++++|+|||++.......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~- 159 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE- 159 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc-
Confidence 9999999999999999988889999999999999999999999999999999999999999999999999987653321
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCC--CCCCCCcchhhhHHHHHHhhCCCCCCCCC----HHHHHHHHHhcCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSS--PATFGNDLWALGCTLYQMLSGTSPFKDTS----EWLIFQRIIARDIRF 274 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~--~~~~~sDiwSLG~ilyelltG~~PF~~~~----~~~~~~~i~~~~~~~ 274 (489)
........|+..|+|||.+... .++.++|+|||||++|+|++|..||...+ ...+...+......+
T Consensus 160 --------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 231 (290)
T cd05613 160 --------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY 231 (290)
T ss_pred --------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC
Confidence 1122356789999999998753 46788999999999999999999997432 344455555666778
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccC
Q 011287 275 PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRG 324 (489)
Q Consensus 275 p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~ 324 (489)
|..+++.+.+|+++||+.||++||++......+++.||||..++|+.+..
T Consensus 232 ~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~ 281 (290)
T cd05613 232 PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLAA 281 (290)
T ss_pred CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHhh
Confidence 88899999999999999999999987766789999999999999988753
No 139
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-43 Score=347.21 Aligned_cols=253 Identities=31% Similarity=0.519 Sum_probs=215.4
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|..+++.++||||+++++.+.+...+|+
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~l 83 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWI 83 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Confidence 3468999999999999999999999999999999986542 2233456779999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 123 ALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
||||+++++|.+++...+.+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~--- 160 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI--- 160 (267)
T ss_pred EEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc---
Confidence 99999999999999888899999999999999999999999999999999999999999999999999987553211
Q ss_pred cCCCCCCCCccceecCCcCCChhhhc---CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCC----
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLN---SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFP---- 275 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p---- 275 (489)
.......|+..|+|||++. ...++.++|+|||||++|+|++|..||...........+.......+
T Consensus 161 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (267)
T cd06645 161 -------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKD 233 (267)
T ss_pred -------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccc
Confidence 1223457899999999984 45588899999999999999999999976655443333333332222
Q ss_pred -CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCC
Q 011287 276 -NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPF 313 (489)
Q Consensus 276 -~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpf 313 (489)
..++..+.++|.+||+.||++||++ .++++|||
T Consensus 234 ~~~~~~~~~~li~~~l~~~P~~R~~~-----~~ll~~~~ 267 (267)
T cd06645 234 KMKWSNSFHHFVKMALTKNPKKRPTA-----EKLLQHPF 267 (267)
T ss_pred cCCCCHHHHHHHHHHccCCchhCcCH-----HHHhcCCC
Confidence 2467899999999999999999998 89999998
No 140
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6.5e-43 Score=338.63 Aligned_cols=253 Identities=30% Similarity=0.478 Sum_probs=223.7
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|.+.+.||+|++|.||+|++..+++.|++|.+....... .....+.+|+.+++.++||||+++++.+.+....|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR-REREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH-HHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 6899999999999999999999999999999987654433 344567789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 126 SCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 126 ~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|+++++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||+++.+....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~---- 155 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT---- 155 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc----
Confidence 99999999999764 568999999999999999999999999999999999999999999999999988654321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCHHH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-RFPNYFSDAA 282 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~~p~~~~~~~ 282 (489)
.......|++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.....+++..... .++..++..+
T Consensus 156 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (256)
T cd08529 156 ------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQL 229 (256)
T ss_pred ------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHH
Confidence 112345788999999999999999999999999999999999999999888777777766543 3555789999
Q ss_pred HHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 283 RDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 283 ~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.++|++||+.+|++||++ .+++.|||.
T Consensus 230 ~~~i~~~l~~~p~~Rp~~-----~~ll~~~~~ 256 (256)
T cd08529 230 AQLIDQCLTKDYRQRPDT-----FQLLRNPSL 256 (256)
T ss_pred HHHHHHHccCCcccCcCH-----HHHhhCCCC
Confidence 999999999999999998 899999984
No 141
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.9e-43 Score=347.91 Aligned_cols=257 Identities=30% Similarity=0.534 Sum_probs=223.3
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.++|++.+.||.|+||.||+|++..++..||+|++... .......+..|+.+++.++||||+++++.+.+....|+|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 36799999999999999999999989999999998643 334455677899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|||+++++|.+++.+. ..+++..++.++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~---- 156 (280)
T cd06611 81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST---- 156 (280)
T ss_pred eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc----
Confidence 9999999999998764 56999999999999999999999999999999999999999999999999988654321
Q ss_pred cCCCCCCCCccceecCCcCCChhhhc-----CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC---CCC
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLN-----SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD---IRF 274 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~---~~~ 274 (489)
........|++.|+|||++. ...++.++|+|||||++|+|++|++||.+.+......++.... +..
T Consensus 157 ------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 230 (280)
T cd06611 157 ------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQ 230 (280)
T ss_pred ------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCC
Confidence 12233567899999999985 3446788999999999999999999999888777666666543 334
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 275 PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 275 p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
|..++.++.++|.+||+.||.+||++ .++++||||....
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~~~~~~~~ 269 (280)
T cd06611 231 PSKWSSSFNDFLKSCLVKDPDDRPTA-----AELLKHPFVSDQS 269 (280)
T ss_pred cccCCHHHHHHHHHHhccChhhCcCH-----HHHhcChhhcccc
Confidence 66789999999999999999999998 8999999998653
No 142
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-43 Score=349.08 Aligned_cols=244 Identities=17% Similarity=0.241 Sum_probs=212.5
Q ss_pred CCCCCeEEe--eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc---
Q 011287 42 FSIQDFELG--KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD--- 116 (489)
Q Consensus 42 ~~~~dy~~~--~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--- 116 (489)
+..+|++.. ..||+|++|.||+|.. +|+.||||++.+...........+.+|+.+|++++||||+++++++.+
T Consensus 15 i~~~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~ 92 (283)
T PHA02988 15 IESDDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVD 92 (283)
T ss_pred cCHHHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEeccc
Confidence 445556555 7899999999999998 789999999977644444445678899999999999999999999876
Q ss_pred -CCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 117 -TFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 117 -~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
...+++||||+++|+|.+++.+.+.+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++.
T Consensus 93 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~ 172 (283)
T PHA02988 93 DLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKI 172 (283)
T ss_pred CCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhh
Confidence 45789999999999999999988889999999999999999999998 4999999999999999999999999999876
Q ss_pred cCCccccccCCCCCCCCccceecCCcCCChhhhcC--CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--
Q 011287 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS--SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-- 270 (489)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-- 270 (489)
+... ....+|+..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+++..+...
T Consensus 173 ~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~ 239 (283)
T PHA02988 173 LSSP-------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNN 239 (283)
T ss_pred hccc-------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC
Confidence 4321 123468899999999976 67899999999999999999999999999888888877654
Q ss_pred CCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 271 DIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 271 ~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.+.+|...++++++||.+||+.||++||++
T Consensus 240 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 269 (283)
T PHA02988 240 SLKLPLDCPLEIKCIVEACTSHDSIKRPNI 269 (283)
T ss_pred CCCCCCcCcHHHHHHHHHHhcCCcccCcCH
Confidence 345666789999999999999999999998
No 143
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.8e-43 Score=342.05 Aligned_cols=259 Identities=28% Similarity=0.463 Sum_probs=220.0
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeeccccc---chhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---KENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~---~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
+|.+++.||.|+||.||+|.+ .+|+.+|+|.+...... .......+.+|+.+++.++|+||+++++++.+....|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 588999999999999999987 57899999998654221 22334568889999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 123 ALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
||||+++++|.+++.+.+.+++..+..++.|++.||+|||+.||+|+||+|+||+++.++.++|+|||++..........
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (265)
T cd06631 80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG 159 (265)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence 99999999999999988889999999999999999999999999999999999999999999999999987653211110
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc---CCCCCCCCC
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR---DIRFPNYFS 279 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~---~~~~p~~~~ 279 (489)
..........|+..|+|||++.+..++.++|+|||||++|+|++|..||...+.......+... ...+|..++
T Consensus 160 ----~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (265)
T cd06631 160 ----THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFS 235 (265)
T ss_pred ----cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCC
Confidence 0011223457899999999999888999999999999999999999999877665544444332 245677899
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.++.++|++||+.+|++||++ .++++||||
T Consensus 236 ~~~~~~i~~~l~~~p~~Rp~~-----~~~l~~~~~ 265 (265)
T cd06631 236 AAAIDFVTSCLTRDQHERPSA-----LQLLRHDFL 265 (265)
T ss_pred HHHHHHHHHHhcCCcccCCCH-----HHHhcCCCC
Confidence 999999999999999999998 899999997
No 144
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.3e-43 Score=356.01 Aligned_cols=262 Identities=24% Similarity=0.387 Sum_probs=211.7
Q ss_pred EEeeEEeee--CceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 48 ELGKIYGVG--SYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 48 ~~~~~LG~G--~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+++++||+| +|++||+++++.+|+.||+|.+..... .......+.+|+.+++.++||||++++++|.++...|+|||
T Consensus 1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred ChhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEe
Confidence 357889999 788999999999999999999876533 23445678889999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 126 SCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 126 ~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|+++|+|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.++++||+.+...........
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~ 159 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR 159 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence 99999999999753 4599999999999999999999999999999999999999999999999987654322110000
Q ss_pred CCCCCCCCccceecCCcCCChhhhcC--CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC--------
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNS--SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR-------- 273 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~-------- 273 (489)
.........+++..|+|||++.+ ..++.++|||||||++|+|++|+.||..................
T Consensus 160 ---~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 160 ---VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred ---ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 00111123467888999999976 45889999999999999999999999876554433332221110
Q ss_pred --------------------------------------CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 274 --------------------------------------FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 274 --------------------------------------~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
+...+++++.+||.+||+.||++|||+ +++++||||+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~-----~ell~~p~f~ 311 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSA-----STLLNHSFFK 311 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCH-----HHHhcChhhh
Confidence 112356789999999999999999999 8999999998
Q ss_pred CCC
Q 011287 316 GID 318 (489)
Q Consensus 316 ~i~ 318 (489)
.+.
T Consensus 312 ~~~ 314 (327)
T cd08227 312 QIK 314 (327)
T ss_pred hcc
Confidence 654
No 145
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=4.3e-43 Score=345.85 Aligned_cols=252 Identities=27% Similarity=0.377 Sum_probs=210.2
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||+|++|.||+|++..++..||+|++..... .+.....+.+|+.+++.++||||+++++++.++..+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 69999999999999999999999999999999865422 22334567779999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 126 SCEGGELFDQITSK---GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 126 ~~~gg~L~~~l~~~---~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|++ ++|.+++... +.+++..++.++.||+.||.|||++||+||||||+||+++.+|.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV--- 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc---
Confidence 997 5888888653 469999999999999999999999999999999999999999999999999987543211
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC----------
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD---------- 271 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~---------- 271 (489)
.......+++.|+|||++.+. .++.++|+|||||++|+|++|++||.+.+.......+....
T Consensus 156 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (285)
T cd07861 156 -------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPG 228 (285)
T ss_pred -------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhc
Confidence 112234678899999998654 47889999999999999999999999876644333222100
Q ss_pred -------------------CCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 -------------------IRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 -------------------~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
......+++++++||++||+.||++|||+ .++++||||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~-----~~ll~~~~~ 285 (285)
T cd07861 229 VTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISA-----KKALNHPYF 285 (285)
T ss_pred chhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCH-----HHHhcCCCC
Confidence 00123478999999999999999999998 899999998
No 146
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=9.2e-43 Score=340.29 Aligned_cols=259 Identities=29% Similarity=0.499 Sum_probs=219.9
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeeccccc--chhHHHHHHHHHHHHHhCCCCCccEEEEEEEc--CCE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT--KENKTAYVKLERIVLDQLDHPGVVRLFFTFQD--TFS 119 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~ 119 (489)
+.+|++.+.||+|+||.||.|.+..+|..||+|.+...... .......+.+|+.+++.++||||+++++.+.+ ...
T Consensus 1 ~~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 1 PTNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERT 80 (265)
T ss_pred CCcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCce
Confidence 36899999999999999999999999999999988643211 22345678889999999999999999999876 357
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+|+||||+++++|.+++.+.+.+++..+..++.|++.||+|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence 89999999999999999888889999999999999999999999999999999999999999999999999988653221
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--CCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR--DIRFPNY 277 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~--~~~~p~~ 277 (489)
. .........|+..|+|||++.+..++.++|+|||||++|+|++|+.||...........+... ...+|..
T Consensus 161 ~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (265)
T cd06652 161 L-------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPH 233 (265)
T ss_pred c-------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchh
Confidence 0 011223456899999999998888999999999999999999999999887665555554432 3446677
Q ss_pred CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 278 FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 278 ~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
++..+.++|++|+. +|++||++ ++++.|||+.
T Consensus 234 ~~~~~~~~i~~~l~-~p~~Rp~~-----~~il~~~~~~ 265 (265)
T cd06652 234 VSDHCRDFLKRIFV-EAKLRPSA-----DELLRHTFVH 265 (265)
T ss_pred hCHHHHHHHHHHhc-ChhhCCCH-----HHHhcCcccC
Confidence 88999999999995 99999998 8999999984
No 147
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.8e-43 Score=353.32 Aligned_cols=247 Identities=27% Similarity=0.400 Sum_probs=195.4
Q ss_pred eeEEeeeCceEEEEEEEc--CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc--CCEEEEEEe
Q 011287 50 GKIYGVGSYSKVVRAKKI--DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD--TFSLYMALE 125 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~--~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~lylV~E 125 (489)
++.||+|+||+||+|+++ .+++.||+|.+..... ...+.+|+.+++.++||||++++++|.+ ...+|+|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 578999999999999975 4678999999865422 2345679999999999999999999854 467899999
Q ss_pred ccCCCChHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeee----CCCCCEEEeeccCc
Q 011287 126 SCEGGELFDQITSK---------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLL----TADGHIKIADFGSV 192 (489)
Q Consensus 126 ~~~gg~L~~~l~~~---------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl----~~~g~ikL~DFG~a 192 (489)
|+.+ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 9965 888887532 248999999999999999999999999999999999999 45679999999999
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHH---------H
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEW---------L 262 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~---------~ 262 (489)
+.+.... .........+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+..+. .
T Consensus 160 ~~~~~~~-------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~ 232 (317)
T cd07868 160 RLFNSPL-------KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 232 (317)
T ss_pred eccCCCC-------ccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHH
Confidence 8654321 011223356899999999998764 5899999999999999999999999754321 1
Q ss_pred HHHHHHhcC----------------------------CCC----------CCCCCHHHHHHHHHhhccCCCCCCCCCCCC
Q 011287 263 IFQRIIARD----------------------------IRF----------PNYFSDAARDLIDRLLDVDPSGRPGAGPGG 304 (489)
Q Consensus 263 ~~~~i~~~~----------------------------~~~----------p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~ 304 (489)
.+..+.... ... ....+.++.+||.+||+.||.+|||+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~---- 308 (317)
T cd07868 233 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITS---- 308 (317)
T ss_pred HHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCH----
Confidence 122221100 000 01135678999999999999999999
Q ss_pred HHHHhcCCCC
Q 011287 305 YAVLKMHPFF 314 (489)
Q Consensus 305 ~~~l~~hpff 314 (489)
+++++||||
T Consensus 309 -~e~l~hp~f 317 (317)
T cd07868 309 -EQAMQDPYF 317 (317)
T ss_pred -HHHhcCCCC
Confidence 899999998
No 148
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=8e-43 Score=341.11 Aligned_cols=258 Identities=29% Similarity=0.512 Sum_probs=218.8
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeeccccc--chhHHHHHHHHHHHHHhCCCCCccEEEEEEEc--CCEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT--KENKTAYVKLERIVLDQLDHPGVVRLFFTFQD--TFSL 120 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~l 120 (489)
.+|++.+.||+|+||.||+|.+..++..||+|.+...... .......+.+|+.+++.++||||+++++.+.+ ...+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 5899999999999999999999999999999998754322 22344567889999999999999999998875 3678
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
|++|||+++++|.+++.+.+.+++..+..++.|++.||+|||++||+||||+|+||+++.++.++|+|||++..+.....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM 161 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999876532110
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--CCCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR--DIRFPNYF 278 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~--~~~~p~~~ 278 (489)
.........++..|+|||.+.+..++.++|+|||||++|+|++|+.||...........+... ...+|..+
T Consensus 162 -------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (266)
T cd06651 162 -------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHI 234 (266)
T ss_pred -------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhc
Confidence 011112346889999999999888999999999999999999999999887665555444332 35567778
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
++.++++| +||..+|++||++ +++++||||+
T Consensus 235 ~~~~~~li-~~~~~~p~~Rp~~-----~eil~hp~~~ 265 (266)
T cd06651 235 SEHARDFL-GCIFVEARHRPSA-----EELLRHPFAQ 265 (266)
T ss_pred CHHHHHHH-HHhcCChhhCcCH-----HHHhcCcccc
Confidence 99999999 5666899999998 8999999996
No 149
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.3e-43 Score=343.61 Aligned_cols=253 Identities=28% Similarity=0.473 Sum_probs=214.5
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
..++|++++.||+|+||.||+|++..+++.||+|++.... ......+.+|+.+++.++||||+++++++.....+|+
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEE
Confidence 3578999999999999999999999999999999986542 2233457789999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 123 ALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
||||+++++|.+++.+.+.+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++..+....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~--- 160 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI--- 160 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc---
Confidence 99999999999999888889999999999999999999999999999999999999999999999999998653211
Q ss_pred cCCCCCCCCccceecCCcCCChhhhc---CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCC-----
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLN---SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRF----- 274 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~----- 274 (489)
.......|+..|+|||.+. ...++.++|+|||||++|+|++|..||...+.......+....+..
T Consensus 161 -------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (267)
T cd06646 161 -------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKD 233 (267)
T ss_pred -------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCcc
Confidence 1223457889999999984 3447789999999999999999999997665444333332222221
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCC
Q 011287 275 PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPF 313 (489)
Q Consensus 275 p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpf 313 (489)
+..++..+.+||++||+.||++||++ +++++|+|
T Consensus 234 ~~~~~~~~~~li~~~l~~~P~~Rp~~-----~~il~~l~ 267 (267)
T cd06646 234 KTKWSSTFHNFVKISLTKNPKKRPTA-----ERLLTHLF 267 (267)
T ss_pred ccccCHHHHHHHHHHhhCChhhCcCH-----HHHhcCCC
Confidence 23478999999999999999999998 88999987
No 150
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.2e-43 Score=343.40 Aligned_cols=259 Identities=26% Similarity=0.481 Sum_probs=219.8
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccc---hhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK---ENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~---~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
+|+.++.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++.++||||+++++++.+....++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4889999999999999999999999999999987543221 2235678889999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC-CEEEeeccCccccCCcccc
Q 011287 123 ALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG-HIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g-~ikL~DFG~a~~~~~~~~~ 201 (489)
||||+++++|.+++.+.+.+++..+..++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||.+..+......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence 999999999999998888899999999999999999999999999999999999998876 5999999998876443110
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHH---H--hcCCCCCC
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI---I--ARDIRFPN 276 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i---~--~~~~~~p~ 276 (489)
.........|+..|+|||++.+..++.++|+|||||++|+|++|..||...........+ . .....+|.
T Consensus 161 ------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (268)
T cd06630 161 ------AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPE 234 (268)
T ss_pred ------CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCch
Confidence 011223457899999999998888999999999999999999999999754432222222 1 23355677
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
.+++++.+++.+||+.||.+||++ .++++||||+
T Consensus 235 ~~~~~~~~~i~~~l~~~p~~R~~~-----~~ll~~~~~~ 268 (268)
T cd06630 235 HLSPGLRDVTLRCLELQPEDRPPS-----RELLKHPVFR 268 (268)
T ss_pred hhCHHHHHHHHHHcCCCcccCcCH-----HHHhcCcccC
Confidence 889999999999999999999999 8999999995
No 151
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3e-44 Score=381.28 Aligned_cols=252 Identities=30% Similarity=0.511 Sum_probs=210.7
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEE-E-----
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTF-Q----- 115 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~-~----- 115 (489)
.-.+++|.+.|.+|||+.||+|++...|..||+|.+-.. .+.....+.+|+.+|+.|. |+|||.+++.. .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~ 111 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN 111 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence 445689999999999999999999988899999988543 6778889999999999995 99999999832 1
Q ss_pred c-CCEEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCC--cEeeccCCCCeeeCCCCCEEEeecc
Q 011287 116 D-TFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMG--LIHRDIKPENLLLTADGHIKIADFG 190 (489)
Q Consensus 116 ~-~~~lylV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~g--IiHrDLKpeNILl~~~g~ikL~DFG 190 (489)
. ...+++.||||.||.|.++++++ ..|+|.++..|++++++||.+||.++ |||||||-|||||+.+|++||||||
T Consensus 112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred CceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccc
Confidence 1 24588999999999999999854 56999999999999999999999998 9999999999999999999999999
Q ss_pred CccccCCccccccCCCCCCCCccceecCCcCCChhhh---cCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHH
Q 011287 191 SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267 (489)
Q Consensus 191 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l---~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i 267 (489)
.|.......... .........-...-|+.|+|||++ .+.+.+.|+|||||||+||-|+....||+.... -.|
T Consensus 192 Satt~~~~~~~~-~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laI 266 (738)
T KOG1989|consen 192 SATTKILSPTSA-QEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAI 266 (738)
T ss_pred ccccccCCCccH-HHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeE
Confidence 987432211000 000000011123569999999997 577899999999999999999999999988754 367
Q ss_pred HhcCCCCCC--CCCHHHHHHHHHhhccCCCCCCCCCC
Q 011287 268 IARDIRFPN--YFSDAARDLIDRLLDVDPSGRPGAGP 302 (489)
Q Consensus 268 ~~~~~~~p~--~~~~~~~~Li~~~L~~dP~~R~t~~~ 302 (489)
+++.+.||+ .++..+++||+.||+.||++||++-+
T Consensus 267 lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Q 303 (738)
T KOG1989|consen 267 LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQ 303 (738)
T ss_pred EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHH
Confidence 899999997 68999999999999999999999854
No 152
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=9e-43 Score=382.71 Aligned_cols=152 Identities=34% Similarity=0.593 Sum_probs=142.3
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
.+++|.+++.||+|+||.||+|.+..+++.||||++.+...........+..|+.+++.++||||++++.++.+...+|+
T Consensus 2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 81 (669)
T cd05610 2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL 81 (669)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence 36899999999999999999999999999999999987655555566778889999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 123 ALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
||||+.|++|.+++...+.+++..++.++.||+.||.|||.+||+||||||+||||+.+++++|+|||+++.
T Consensus 82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 999999999999998888899999999999999999999999999999999999999999999999999863
No 153
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=6.3e-43 Score=344.80 Aligned_cols=252 Identities=29% Similarity=0.521 Sum_probs=217.9
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEec
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALES 126 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~ 126 (489)
|++.+.||.|+||.||+|++..++..+|+|.+... .......+.+|+.+++.++||||+++++.+......|+||||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 68899999999999999999999999999998654 233445677799999999999999999999999999999999
Q ss_pred cCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 127 CEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 127 ~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
+.+++|..++.+ .+.+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~------- 156 (282)
T cd06643 84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT------- 156 (282)
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-------
Confidence 999999888765 467999999999999999999999999999999999999999999999999998754321
Q ss_pred CCCCCCccceecCCcCCChhhhc-----CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC---CCCCCC
Q 011287 206 AASDDKACTFVGTAAYVPPEVLN-----SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD---IRFPNY 277 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~---~~~p~~ 277 (489)
........|+..|+|||++. +..++.++|+|||||++|+|++|.+||...+.......+.... ...|..
T Consensus 157 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd06643 157 ---IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 233 (282)
T ss_pred ---ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccc
Confidence 11223457899999999984 3457789999999999999999999999888777666665432 335667
Q ss_pred CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 278 FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 278 ~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
++.++.+||.+||+.||.+||++ .++++||||..
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~ 267 (282)
T cd06643 234 WSSEFKDFLKKCLEKNVDARWTT-----TQLLQHPFVTV 267 (282)
T ss_pred cCHHHHHHHHHHccCChhhCcCH-----HHHhcCCCEec
Confidence 89999999999999999999998 89999999974
No 154
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.1e-42 Score=342.96 Aligned_cols=254 Identities=27% Similarity=0.435 Sum_probs=213.9
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|+++.+|+.||+|++...... ......+.+|+.+++.++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 5799999999999999999999999999999998654322 223345677999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||++++.|..++...+.+++..++.++.||+.||+|||+.|++||||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~----- 154 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG----- 154 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc-----
Confidence 999998888877777789999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-------------
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR------------- 270 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~------------- 270 (489)
.......++..|+|||++.+ ..++.++|+|||||++|+|++|.+||.+.+..+....+...
T Consensus 155 -----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 155 -----DDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred -----ccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcc
Confidence 11224467889999999876 45788999999999999999999999987765544333210
Q ss_pred ------CCCCC------------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 271 ------DIRFP------------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 271 ------~~~~p------------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
....| +.++..+.+||.+||+.||++||++ .+++.||||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~eil~~~~f 286 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSC-----EELLEHPYF 286 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCH-----HHHhcCCCC
Confidence 00011 2467889999999999999999998 899999998
No 155
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.1e-42 Score=338.76 Aligned_cols=257 Identities=32% Similarity=0.520 Sum_probs=222.0
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++++.||.|+||+||+|....++..+|+|++....... ....+.+|+.+++.++|+||+++++.+.+....|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 58999999999999999999999999999999987654333 4567888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 125 ESCEGGELFDQITSK---GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 125 E~~~gg~L~~~l~~~---~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
|++++++|.+++... +.+++..++.++.||+.||.|||++||+||||+|+||++++++.++|+|||++..+......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 999999999999764 45899999999999999999999999999999999999999999999999998766543211
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-CCC----
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-RFP---- 275 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~~p---- 275 (489)
........+|+..|+|||++... .++.++|+|||||++|+|++|..||...+....+.++..... .++
T Consensus 159 ------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (267)
T cd06610 159 ------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGAD 232 (267)
T ss_pred ------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccc
Confidence 01123456799999999999776 789999999999999999999999998877666666555432 122
Q ss_pred -CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 276 -NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 276 -~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
..+++++.++|.+||+.||++||++ .+++.||||
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~ll~~p~~ 267 (267)
T cd06610 233 YKKYSKSFRKMISLCLQKDPSKRPTA-----EELLKHKFF 267 (267)
T ss_pred cccccHHHHHHHHHHcCCChhhCcCH-----HHHhhCCCC
Confidence 2568899999999999999999998 899999998
No 156
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-42 Score=346.36 Aligned_cols=254 Identities=28% Similarity=0.455 Sum_probs=219.6
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
..+|++.+.||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.+.||||+++++.|.+....|+|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 3689999999999999999999999999999999876532 2345677899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|||+++++|.+++.. +.+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.......
T Consensus 96 ~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~---- 170 (296)
T cd06654 96 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---- 170 (296)
T ss_pred ecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc----
Confidence 999999999998865 468999999999999999999999999999999999999999999999999987543221
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc---CCCCCCCCCH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR---DIRFPNYFSD 280 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~---~~~~p~~~~~ 280 (489)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+.......+... ....|..++.
T Consensus 171 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (296)
T cd06654 171 ------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSA 244 (296)
T ss_pred ------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCH
Confidence 1123457899999999999888999999999999999999999999887765443333322 2234567889
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.+.+||.+||+.||++||++ .+++.||||..
T Consensus 245 ~l~~li~~~l~~~p~~Rpt~-----~eil~~~~~~~ 275 (296)
T cd06654 245 IFRDFLNRCLDMDVEKRGSA-----KELLQHQFLKI 275 (296)
T ss_pred HHHHHHHHHCcCCcccCcCH-----HHHhhChhhhc
Confidence 99999999999999999998 89999999974
No 157
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=9.1e-43 Score=343.49 Aligned_cols=251 Identities=26% Similarity=0.448 Sum_probs=212.7
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|++..+++.||+|++.+.. .......+.+|+.++++++||||+++++.+.+....++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 47999999999999999999999999999999987542 2233456778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++..+...
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~------ 148 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS------ 148 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc------
Confidence 99999998654 35899999999999999999999999999999999999999999999999998754321
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH-------HHHHHHHHhcC-CCC-C
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE-------WLIFQRIIARD-IRF-P 275 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~-------~~~~~~i~~~~-~~~-p 275 (489)
.....+||..|+|||++.+..++.++|+|||||++|+|++|..||..... ....+.+.... ... .
T Consensus 149 ------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (279)
T cd06619 149 ------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPV 222 (279)
T ss_pred ------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCC
Confidence 22345799999999999998899999999999999999999999965321 12233333222 222 2
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
..+++++.+||.+||+.||++||++ ++++.||||...+
T Consensus 223 ~~~~~~~~~li~~~l~~~P~~Rp~~-----~eil~~~~~~~~~ 260 (279)
T cd06619 223 GQFSEKFVHFITQCMRKQPKERPAP-----ENLMDHPFIVQYN 260 (279)
T ss_pred CcCCHHHHHHHHHHhhCChhhCCCH-----HHHhcCccccccc
Confidence 3478899999999999999999988 8999999998654
No 158
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-42 Score=346.55 Aligned_cols=254 Identities=29% Similarity=0.480 Sum_probs=221.7
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
.+|++++.||.|+||.||+|.+..+|+.||+|.+.... ......+.+|..+++.++||||+++++++.+...+|+|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 57999999999999999999999999999999986542 233456778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++++|..++.. ..+++.++..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~----- 169 (296)
T cd06655 96 EYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ----- 169 (296)
T ss_pred EecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc-----
Confidence 99999999998875 469999999999999999999999999999999999999999999999999987643321
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc---CCCCCCCCCHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR---DIRFPNYFSDA 281 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~---~~~~p~~~~~~ 281 (489)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|+.||.+.+.......+... ....|..+++.
T Consensus 170 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (296)
T cd06655 170 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPI 244 (296)
T ss_pred -----ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHH
Confidence 1123457899999999999888999999999999999999999999988776655444433 23456678999
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 282 ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 282 ~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
+.+||++||..||++||++ .+++.||||+..
T Consensus 245 ~~~li~~~l~~dp~~Rpt~-----~~il~~~~~~~~ 275 (296)
T cd06655 245 FRDFLNRCLEMDVEKRGSA-----KELLQHPFLKLA 275 (296)
T ss_pred HHHHHHHHhhcChhhCCCH-----HHHhhChHhhhc
Confidence 9999999999999999998 899999999753
No 159
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=9.1e-43 Score=344.70 Aligned_cols=269 Identities=39% Similarity=0.723 Sum_probs=228.8
Q ss_pred CeEEeeEEeeeCceEEEEEEEc---CCCcEEEEEEeeccccc-chhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFIT-KENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~---~tg~~vAiK~~~k~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~l 120 (489)
+|++.+.||+|+||.||+|++. .++..||+|++.+.... .......+.+|..++.++ +||||+++++.+.....+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 5899999999999999999864 46789999998764332 223345677899999999 699999999999999999
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
|+||||+.+|+|.+++.+.+.+++..++.++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++..+....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 159 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE- 159 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc-
Confidence 9999999999999999887889999999999999999999999999999999999999999999999999987653221
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCC--CCCCCcchhhhHHHHHHhhCCCCCCCCC----HHHHHHHHHhcCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSP--ATFGNDLWALGCTLYQMLSGTSPFKDTS----EWLIFQRIIARDIRF 274 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~--~~~~sDiwSLG~ilyelltG~~PF~~~~----~~~~~~~i~~~~~~~ 274 (489)
........|+..|+|||.+.+.. .+.++|+||||+++|+|++|..||...+ .....+.+.......
T Consensus 160 --------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd05583 160 --------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPF 231 (288)
T ss_pred --------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCC
Confidence 11223457899999999987655 7889999999999999999999996432 334445566666778
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCC
Q 011287 275 PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQ 325 (489)
Q Consensus 275 p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~ 325 (489)
|..++..+.++|.+||+.||++|||+. ++.++++||||+.++|+.+...
T Consensus 232 ~~~~~~~l~~li~~~l~~~p~~R~t~~--~~~~~l~~~~~~~~~~~~~~~~ 280 (288)
T cd05583 232 PKTMSAEARDFIQKLLEKDPKKRLGAN--GADEIKNHPFFQGIDWDDLAAK 280 (288)
T ss_pred CcccCHHHHHHHHHHhcCCHhhccCcc--hHHHHhcCcccccCCHHHHhhh
Confidence 888999999999999999999999984 4688999999999999877543
No 160
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=6.5e-43 Score=343.04 Aligned_cols=256 Identities=32% Similarity=0.511 Sum_probs=224.2
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||.|+||.||+|++..+++.||+|++.... .......+.+|+.+++.++||||+++++.+.+...+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 47999999999999999999999999999999987553 1233455778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++++|.+++... .+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||+++.+....
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~----- 152 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM----- 152 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-----
Confidence 999999999999875 79999999999999999999999999999999999999999999999999998764321
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-CCCCCC-CCHHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD-IRFPNY-FSDAA 282 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~-~~~p~~-~~~~~ 282 (489)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|.+||...+.......+.... ..++.. ++.++
T Consensus 153 -----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (274)
T cd06609 153 -----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPF 227 (274)
T ss_pred -----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHH
Confidence 12234578899999999998889999999999999999999999998877766665555443 334444 88999
Q ss_pred HHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 283 RDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 283 ~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
.++|.+||..||++||++ +++++||||.+..
T Consensus 228 ~~~l~~~l~~~p~~Rpt~-----~~il~~~~~~~~~ 258 (274)
T cd06609 228 KDFVSLCLNKDPKERPSA-----KELLKHKFIKKAK 258 (274)
T ss_pred HHHHHHHhhCChhhCcCH-----HHHhhChhhcCCC
Confidence 999999999999999998 8999999998654
No 161
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.5e-43 Score=359.40 Aligned_cols=250 Identities=26% Similarity=0.394 Sum_probs=203.8
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
....+|++++.||+|+||.||+|++..++..||+|+..+.. ...|..+++.++||||+++++++.+....|
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~---------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT---------TLIEAMLLQNVNHPSVIRMKDTLVSGAITC 133 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc---------cHHHHHHHHhCCCCCCcChhheEEeCCeeE
Confidence 44568999999999999999999999999999999854331 235889999999999999999999999999
Q ss_pred EEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 122 MALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
+|||++. ++|.+++.+ .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus 134 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred EEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 9999996 588888865 456999999999999999999999999999999999999999999999999998743211
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCC-CCCCCH---------HHHHHHHHhc
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSP-FKDTSE---------WLIFQRIIAR 270 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~P-F~~~~~---------~~~~~~i~~~ 270 (489)
.......||..|+|||++.+..++.++|||||||++|+|+++..| |..... ...+..+...
T Consensus 211 ---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~ 281 (357)
T PHA03209 211 ---------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIIST 281 (357)
T ss_pred ---------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 122346799999999999999999999999999999999985444 443211 0111111110
Q ss_pred ----CCCCC------------------------------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 271 ----DIRFP------------------------------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 271 ----~~~~p------------------------------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
...+| ..++.++.+||.+||+.||++|||+ .++++||||+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta-----~e~l~hp~f~~ 356 (357)
T PHA03209 282 LKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSA-----EEILNYPMFAQ 356 (357)
T ss_pred hccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCH-----HHHhcCchhcc
Confidence 11111 1356778899999999999999999 89999999985
Q ss_pred C
Q 011287 317 I 317 (489)
Q Consensus 317 i 317 (489)
+
T Consensus 357 ~ 357 (357)
T PHA03209 357 L 357 (357)
T ss_pred C
Confidence 3
No 162
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.3e-42 Score=343.97 Aligned_cols=266 Identities=22% Similarity=0.326 Sum_probs=218.6
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcC-----CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKID-----TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~-----tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
..++|++.+.||+|+||.||+|..+. .+..||+|.+..... ......+.+|..+++.++||||+++++++.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--LRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 45789999999999999999997652 356899998864421 22233466799999999999999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEe
Q 011287 118 FSLYMALESCEGGELFDQITSKG----------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIA 187 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~----------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~ 187 (489)
...|+||||+.+|+|.+++.+.+ .++...+..++.||+.||.|||++||+||||||+||+++.++.++|+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence 99999999999999999997532 34677889999999999999999999999999999999999999999
Q ss_pred eccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHH
Q 011287 188 DFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQR 266 (489)
Q Consensus 188 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~ 266 (489)
|||+++....... ........++..|+|||.+.+..++.++|+|||||++|+|++ |.+||.+.+..+....
T Consensus 162 Dfg~~~~~~~~~~--------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~ 233 (288)
T cd05061 162 DFGMTRDIYETDY--------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 233 (288)
T ss_pred cCCcccccccccc--------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9999875432211 011122345678999999998889999999999999999998 8999998887777776
Q ss_pred HHhc-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc--CCCCCCCCc
Q 011287 267 IIAR-DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM--HPFFKGIDW 319 (489)
Q Consensus 267 i~~~-~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~--hpff~~i~~ 319 (489)
+... ...+|...++.+.+++.+||+.||++||++.+ -.+.+.+ ||+|.+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~-ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 234 VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLE-IVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHH-HHHHHHhhcCCCCCCCCC
Confidence 6654 34567778999999999999999999999843 1122222 999999998
No 163
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-45 Score=369.23 Aligned_cols=257 Identities=31% Similarity=0.521 Sum_probs=229.8
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
-++|+..||.|+||.||+|.+++++-.-|.|++... .+...+...-|+.+|..++||+||+|++.|-.++.++++.|
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE 109 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE 109 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence 368999999999999999999999999999999754 34455566669999999999999999999988899999999
Q ss_pred ccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 126 SCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 126 ~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||.||-+...+..- ..|++.+++.+++|++.||.|||+++|||||||..|||++.+|.|+|+|||.+.....
T Consensus 110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~------- 182 (1187)
T KOG0579|consen 110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS------- 182 (1187)
T ss_pred ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh-------
Confidence 99999988877664 4599999999999999999999999999999999999999999999999998764322
Q ss_pred CCCCCCCccceecCCcCCChhhh-----cCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC---CCC
Q 011287 205 NAASDDKACTFVGTAAYVPPEVL-----NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR---FPN 276 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l-----~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~---~p~ 276 (489)
...+..+|.|||.|||||+. .+.+|+.++||||||++|.+|..+.+|....+....+-+|-+..++ -|.
T Consensus 183 ---t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS 259 (1187)
T KOG0579|consen 183 ---TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPS 259 (1187)
T ss_pred ---HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcc
Confidence 23455689999999999986 5678999999999999999999999999999999999998876654 477
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcc
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWK 320 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~ 320 (489)
.++..+.|++.+||.+||..||++ ++|++||||.+++-.
T Consensus 260 ~Ws~~F~DfLk~cL~Knp~~Rp~a-----aqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 260 HWSRSFSDFLKRCLVKNPRNRPPA-----AQLLKHPFVQNAPSN 298 (1187)
T ss_pred hhhhHHHHHHHHHHhcCCccCCCH-----HHHhhCcccccCCcc
Confidence 899999999999999999999999 899999999977643
No 164
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.1e-42 Score=335.60 Aligned_cols=253 Identities=28% Similarity=0.539 Sum_probs=223.2
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||+|+||.||++++..+|+.||+|.+....... .....+.+|+.+++.++||||+++++++.+....|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP-KEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh-HHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 5899999999999999999999999999999987643332 234567789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 126 SCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 126 ~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|+.+++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 155 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV---- 155 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch----
Confidence 99999999998764 258999999999999999999999999999999999999999999999999987653321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCHHH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-RFPNYFSDAA 282 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~~p~~~~~~~ 282 (489)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+.......+..+.. ..|..++.++
T Consensus 156 ------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (256)
T cd08218 156 ------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDL 229 (256)
T ss_pred ------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHH
Confidence 112245688999999999988899999999999999999999999998888877777766554 4677889999
Q ss_pred HHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 283 RDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 283 ~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.++|.+||+.+|.+||++ .++++||||
T Consensus 230 ~~li~~~l~~~p~~Rp~~-----~~vl~~~~~ 256 (256)
T cd08218 230 RNLVSQLFKRNPRDRPSV-----NSILEKNFI 256 (256)
T ss_pred HHHHHHHhhCChhhCcCH-----HHHhhCcCC
Confidence 999999999999999998 899999998
No 165
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.8e-42 Score=336.71 Aligned_cols=252 Identities=32% Similarity=0.514 Sum_probs=219.3
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.++|++.+.||.|+||.||+|.+..+++.+|+|++.... ......+.+|..+++.++||||+++++.+.+...+|++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 378999999999999999999999999999999997542 22456788899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|||+.+++|.+++... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 155 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI--- 155 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh---
Confidence 9999999999999876 789999999999999999999999999999999999999999999999999987643211
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCC---CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC-----C
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSS---PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR-----F 274 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~---~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~-----~ 274 (489)
.......++..|+|||++... .++.++|+|||||++|+|++|.+||.+.+.......+....+. .
T Consensus 156 -------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (262)
T cd06613 156 -------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKD 228 (262)
T ss_pred -------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccc
Confidence 122345789999999999776 7889999999999999999999999988766655555444222 2
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCC
Q 011287 275 PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPF 313 (489)
Q Consensus 275 p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpf 313 (489)
+..++.++.+||++||..||.+||++ .+++.|+|
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~il~~~~ 262 (262)
T cd06613 229 KEKWSPVFHDFIKKCLTKDPKKRPTA-----TKLLQHPF 262 (262)
T ss_pred hhhhhHHHHHHHHHHcCCChhhCCCH-----HHHhcCCC
Confidence 34567889999999999999999998 89999998
No 166
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-42 Score=383.59 Aligned_cols=262 Identities=28% Similarity=0.467 Sum_probs=219.6
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc--CC
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD--TF 118 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~ 118 (489)
...+++|++++.||+|+||+||+|++..++..||+|++...... ......+..|+.+|+.|+|||||+++++|.+ ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 34568999999999999999999999999999999999765433 3344567789999999999999999998854 45
Q ss_pred EEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC-------CcEeeccCCCCeeeCC-------
Q 011287 119 SLYMALESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSM-------GLIHRDIKPENLLLTA------- 180 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~-------gIiHrDLKpeNILl~~------- 180 (489)
.+|+|||||.+|+|.++|.. .+.+++..++.|+.||+.||.|||+. +|+||||||+||||+.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 79999999999999999875 25799999999999999999999985 4999999999999964
Q ss_pred ----------CCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcC--CCCCCCCcchhhhHHHHHH
Q 011287 181 ----------DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS--SPATFGNDLWALGCTLYQM 248 (489)
Q Consensus 181 ----------~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~~~~sDiwSLG~ilyel 248 (489)
.+.+||+|||++..+... ......+||+.|+|||++.+ ..++.++||||||||||+|
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~-----------s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYEL 236 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIE-----------SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYEL 236 (1021)
T ss_pred ccccccccCCCCceEEccCCcccccccc-----------ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHH
Confidence 235899999999765322 12235579999999999864 4588999999999999999
Q ss_pred hhCCCCCCCCCHHHHHHHHHhcCCCCC-CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCc
Q 011287 249 LSGTSPFKDTSEWLIFQRIIARDIRFP-NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDW 319 (489)
Q Consensus 249 ltG~~PF~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~ 319 (489)
++|..||...+....+..++.....+| ...+.++.+||..||+.+|.+||++ .+++.||||..+..
T Consensus 237 LTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa-----~QlL~h~~ik~i~~ 303 (1021)
T PTZ00266 237 CSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSA-----LQCLGYQIIKNVGP 303 (1021)
T ss_pred HHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCH-----HHHhccHHHhhcCC
Confidence 999999987766555544444444444 4578999999999999999999998 88999999987653
No 167
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.3e-43 Score=345.87 Aligned_cols=252 Identities=27% Similarity=0.434 Sum_probs=208.3
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||+|+||.||+|++..+|+.||+|.+..... .......+.+|+.+++.++||||+++++++.+...+|+|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 58999999999999999999999999999999875432 22233456679999999999999999999999999999999
Q ss_pred ccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 126 SCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 126 ~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
|+.+ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||+++.+....
T Consensus 80 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----- 153 (284)
T cd07839 80 YCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV----- 153 (284)
T ss_pred cCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-----
Confidence 9975 88887765 4679999999999999999999999999999999999999999999999999987543211
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCC-CCCCCcchhhhHHHHHHhhCCCCC-CCCCHHHHHHHHHhcC-----------
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSP-ATFGNDLWALGCTLYQMLSGTSPF-KDTSEWLIFQRIIARD----------- 271 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~~~sDiwSLG~ilyelltG~~PF-~~~~~~~~~~~i~~~~----------- 271 (489)
.......++..|+|||++.+.. ++.++|+|||||++|+|++|..|| .+.+....+..+....
T Consensus 154 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07839 154 -----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGV 228 (284)
T ss_pred -----CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHh
Confidence 1122346789999999987644 788999999999999999988875 5555444444432210
Q ss_pred ------C------------CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 ------I------------RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 ------~------------~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
. .....+++++++||++||+.||.+|||+ ++++.||||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~-----~~il~h~~f 284 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISA-----EEALQHPYF 284 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCH-----HHHhcCCCC
Confidence 0 0112468899999999999999999998 899999998
No 168
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.5e-42 Score=333.28 Aligned_cols=253 Identities=28% Similarity=0.532 Sum_probs=223.9
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||.|+||.||.+++..+++.+++|.+........ ....+.+|+.++++++|+||+++++++.+...++++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK-ERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchh-HHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 59999999999999999999999999999999876544333 34456789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 126 SCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 126 ~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|+++++|.+++.+. ..+++..+..++.|++.||.|||+.|++||||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~---- 155 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY---- 155 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc----
Confidence 99999999999775 468999999999999999999999999999999999999999999999999987653322
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC-CCCCCCHHH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR-FPNYFSDAA 282 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~-~p~~~~~~~ 282 (489)
.......|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+....+..+.+. .+..++.++
T Consensus 156 ------~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (256)
T cd08221 156 ------SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSEL 229 (256)
T ss_pred ------ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHH
Confidence 1223457899999999998888899999999999999999999999998888888777765543 345689999
Q ss_pred HHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 283 RDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 283 ~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.++|.+||+.||.+||++ .++++|||+
T Consensus 230 ~~~i~~~l~~~p~~R~s~-----~~ll~~~~l 256 (256)
T cd08221 230 ISLVHSLLQQDPEKRPTA-----DEVLDQPLL 256 (256)
T ss_pred HHHHHHHcccCcccCCCH-----HHHhhCcCC
Confidence 999999999999999998 899999986
No 169
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.2e-43 Score=344.11 Aligned_cols=254 Identities=29% Similarity=0.468 Sum_probs=216.5
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++++.||+|+||.||+|++..+|..||+|.+.... .......+.+|+.++++++||||+++++.+.....+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 57999999999999999999999999999999886532 2333456778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 125 ESCEGGELFDQITSK---GHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 125 E~~~gg~L~~~l~~~---~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
||+++++|..++... +.+++..++.++.||+.||.|||+ .||+||||||+||+++.++.++|+|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 999999999988763 379999999999999999999997 59999999999999999999999999998754321
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCC------CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHH---HHHhc-
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSP------ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQ---RIIAR- 270 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~------~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~---~i~~~- 270 (489)
......|+..|+|||.+.+.. ++.++|+|||||++|+|++|..||........+. .+...
T Consensus 157 ----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd06622 157 ----------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD 226 (286)
T ss_pred ----------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC
Confidence 122346888999999985543 4789999999999999999999997765544333 33332
Q ss_pred CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 271 DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 271 ~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
...+|..++.++.+||.+||+.+|++||++ .++++||||...
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~l~~~~~~~~~ 268 (286)
T cd06622 227 PPTLPSGYSDDAQDFVAKCLNKIPNRRPTY-----AQLLEHPWLVKY 268 (286)
T ss_pred CCCCCcccCHHHHHHHHHHcccCcccCCCH-----HHHhcChhhhhc
Confidence 345677799999999999999999999998 899999999754
No 170
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.1e-42 Score=346.39 Aligned_cols=254 Identities=29% Similarity=0.468 Sum_probs=219.1
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
..+|++++.||+|+||.||+|.+..+++.||+|.+.... ......+.+|..+++.++||||+++++.|......|+|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 378999999999999999999999999999999986542 22345677899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|||+++++|.+++.+ ..+++..+..++.|++.||.|||+.|++||||||+|||++.++.++|+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~---- 169 (297)
T cd06656 95 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---- 169 (297)
T ss_pred ecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc----
Confidence 999999999999875 468999999999999999999999999999999999999999999999999987543321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc---CCCCCCCCCH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR---DIRFPNYFSD 280 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~---~~~~p~~~~~ 280 (489)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|..||.+.+.......+... ....|..++.
T Consensus 170 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (297)
T cd06656 170 ------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSA 243 (297)
T ss_pred ------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCH
Confidence 1123456889999999999988999999999999999999999999877654433222221 2235667889
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.+++||.+||..||++||++ +++++||||+.
T Consensus 244 ~~~~li~~~l~~~p~~Rps~-----~~il~~~~~~~ 274 (297)
T cd06656 244 VFRDFLNRCLEMDVDRRGSA-----KELLQHPFLKL 274 (297)
T ss_pred HHHHHHHHHccCChhhCcCH-----HHHhcCchhcc
Confidence 99999999999999999998 89999999975
No 171
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.5e-42 Score=334.02 Aligned_cols=248 Identities=28% Similarity=0.575 Sum_probs=217.2
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||+|+||.||++++..+++.||+|.+..... ......+..|..+++.++||||+++++.+.+...+|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 68999999999999999999999999999999865422 2334567779999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 126 SCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 126 ~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|+++|+|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||++++++.++|+|||.+..+....
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---- 154 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---- 154 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc----
Confidence 99999999988653 458999999999999999999999999999999999999999999999999987653321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCHHH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-RFPNYFSDAA 282 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~~p~~~~~~~ 282 (489)
.......|++.|+|||++.+..++.++|+||||+++|+|++|..||...+.......+..... .+|..++..+
T Consensus 155 ------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (255)
T cd08219 155 ------AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYEL 228 (255)
T ss_pred ------cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHH
Confidence 122346789999999999988899999999999999999999999998887777777766544 3677789999
Q ss_pred HHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 283 RDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 283 ~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
.+||.+||+.||++||++ .+++.
T Consensus 229 ~~li~~~l~~~P~~Rp~~-----~~il~ 251 (255)
T cd08219 229 RSLIKQMFKRNPRSRPSA-----TTILS 251 (255)
T ss_pred HHHHHHHHhCCcccCCCH-----HHHhh
Confidence 999999999999999998 66764
No 172
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.9e-42 Score=344.00 Aligned_cols=258 Identities=30% Similarity=0.426 Sum_probs=215.3
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC--CEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT--FSL 120 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~l 120 (489)
..++|++.+.||+|+||.||+|.+..+|+.||+|++....... .......+|+.+++.++|+||+++++++.+. ..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 4689999999999999999999999999999999986543222 2223455699999999999999999999765 568
Q ss_pred EEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 121 YMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
|+||||+.+ +|.+++... ..+++..+..++.||+.||.|||+.|++||||||+||+++.++.++|+|||++..+....
T Consensus 84 ~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~ 162 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA 162 (309)
T ss_pred EEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence 999999975 888888763 679999999999999999999999999999999999999999999999999998654321
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--------
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-------- 270 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-------- 270 (489)
.......+++.|+|||++.+ ..++.++|+|||||++|+|++|++||.+.+....+..+...
T Consensus 163 ----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07845 163 ----------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESI 232 (309)
T ss_pred ----------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhh
Confidence 11122345788999999865 45789999999999999999999999998888777666541
Q ss_pred -----------CCCCC-----------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 271 -----------DIRFP-----------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 271 -----------~~~~p-----------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.+.++ ..+++++.+||.+||+.||++||++ .+++.||||++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~-----~~il~h~~f~~~ 296 (309)
T cd07845 233 WPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATA-----EEALESSYFKEK 296 (309)
T ss_pred chhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCH-----HHHhcChhhccC
Confidence 11111 1258899999999999999999998 899999999853
No 173
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.2e-42 Score=339.58 Aligned_cols=254 Identities=30% Similarity=0.467 Sum_probs=215.9
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||+|+||.||+|++..+|..||+|++....... .....+.+|+.+++.++||||+++++++.+...+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc-hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 6899999999999999999999999999999997654322 334567789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 126 SCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 126 ~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
|+ +++|.+++... ..+++..++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~----- 153 (286)
T cd07832 80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE----- 153 (286)
T ss_pred cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC-----
Confidence 99 99999998653 569999999999999999999999999999999999999999999999999988654321
Q ss_pred CCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC------------
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD------------ 271 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~------------ 271 (489)
........|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+.+....+..+...-
T Consensus 154 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 154 ----PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred ----CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhcc
Confidence 1112345789999999998654 46899999999999999999999998887766665544310
Q ss_pred -------CCCC-----------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 272 -------IRFP-----------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 272 -------~~~p-----------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
..++ +..+.++.+||++||+.||++||++ +++++||||.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~-----~~~l~h~~~~ 286 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSA-----AEALRHPYFT 286 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCH-----HHHhhCcCcC
Confidence 0111 2357899999999999999999999 8999999994
No 174
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.5e-42 Score=341.85 Aligned_cols=254 Identities=20% Similarity=0.340 Sum_probs=217.3
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCC-----cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTG-----TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD 116 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg-----~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 116 (489)
+..++|++.+.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 45689999999999999999999986555 789999986442 23344567889999999999999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC
Q 011287 117 TFSLYMALESCEGGELFDQITSK----------------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA 180 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~----------------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~ 180 (489)
....|++|||+++|+|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 99999999999999999999765 45788999999999999999999999999999999999999
Q ss_pred CCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCC
Q 011287 181 DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259 (489)
Q Consensus 181 ~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~ 259 (489)
++.++|+|||++........ ........+++.|+|||.+.+..++.++|+|||||++|+|++ |..||.+.+
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADY--------YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS 231 (283)
T ss_pred CCcEEECCCcceeecccccc--------ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999999999875432210 111223467889999999988889999999999999999998 999999988
Q ss_pred HHHHHHHHHhcC-CCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 260 EWLIFQRIIARD-IRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 260 ~~~~~~~i~~~~-~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
..+....+.... ...|..+++++.+|+.+||+.||.+||++ .++++
T Consensus 232 ~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~-----~~i~~ 278 (283)
T cd05048 232 NQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRF-----KDIHT 278 (283)
T ss_pred HHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCH-----HHHHH
Confidence 888877776544 34577899999999999999999999998 66664
No 175
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.8e-42 Score=342.69 Aligned_cols=255 Identities=29% Similarity=0.454 Sum_probs=215.9
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeeccccc--chhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT--KENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
+|++.+.||+|+||.||+|.+..+|+.||+|.+...... .......+..|+.+++.++|+||+++++++.+...+|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 589999999999999999999999999999999765433 122344566799999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|||+ +|+|.+++...+ .+++..+..++.||+.||.|||++||+||||+|+||+++.+|.++|+|||++.......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~--- 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN--- 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC---
Confidence 9999 889999998776 79999999999999999999999999999999999999999999999999998654321
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC---------
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI--------- 272 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~--------- 272 (489)
.......++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+....+.++.....
T Consensus 157 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 157 -------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG 229 (298)
T ss_pred -------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhh
Confidence 11223356888999999854 4578899999999999999999999988887666655543100
Q ss_pred -------------------CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 273 -------------------RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 273 -------------------~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
......+..+.+||.+||+.||++||++ .+++.||||++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~-----~e~l~~~~~~~ 287 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITA-----RQALEHPYFSN 287 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCH-----HHHhhCccccC
Confidence 0112357889999999999999999998 89999999986
No 176
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.9e-42 Score=336.61 Aligned_cols=248 Identities=17% Similarity=0.310 Sum_probs=211.1
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEc---CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF 118 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~---~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 118 (489)
+...+|++.+.||+|+||.||+|.++ ..+..||+|.+.... .......+.+|..+++.++||||+++++++....
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 79 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN 79 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC
Confidence 34578999999999999999999875 456799999987542 2233456778999999999999999999999999
Q ss_pred EEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 119 SLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
.+|+||||+++|+|.+++.+. +.+++..++.++.||+.||+|||++|++||||||+|||++.++.++++|||.+.....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 999999999999999999874 5799999999999999999999999999999999999999999999999998764322
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCC
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFP 275 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p 275 (489)
... .......++..|+|||.+.+..++.++|||||||++|++++ |..||.+.+.....+.+... ....|
T Consensus 160 ~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 230 (266)
T cd05064 160 EAI---------YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAP 230 (266)
T ss_pred cch---------hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCC
Confidence 110 11112345678999999999999999999999999999775 99999998888777776654 34567
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
..++..+.+++.+||+.+|.+||++
T Consensus 231 ~~~~~~~~~li~~c~~~~p~~RP~~ 255 (266)
T cd05064 231 RNCPNLLHQLMLDCWQKERGERPRF 255 (266)
T ss_pred CCCCHHHHHHHHHHcCCCchhCCCH
Confidence 7889999999999999999999998
No 177
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.6e-42 Score=332.93 Aligned_cols=253 Identities=30% Similarity=0.544 Sum_probs=221.4
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEE--cCCEEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQ--DTFSLYMA 123 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~lylV 123 (489)
+|++.+.||.|+||.||+|.+..+|..||+|++...... ......+..|+.+++.++||||+++++.+. ....+|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT-EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 689999999999999999999999999999998765443 334456778999999999999999999775 34678999
Q ss_pred EeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH-----hCCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 124 LESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIH-----SMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH-----~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
|||+++++|.+++.. .+.+++..+..++.||+.||.||| +.+++|+||+|+||+++.++.++|+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999999875 357999999999999999999999 89999999999999999999999999999986
Q ss_pred cCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-C
Q 011287 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-R 273 (489)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~ 273 (489)
..... .......|++.|+|||++.+..++.++|+||||+++|+|++|..||...+.....+.+..... .
T Consensus 160 ~~~~~----------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 229 (265)
T cd08217 160 LGHDS----------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRR 229 (265)
T ss_pred ccCCc----------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCC
Confidence 54321 112345789999999999988899999999999999999999999999887777777766544 4
Q ss_pred CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 274 FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 274 ~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
+|..++..+.+|+.+||+.+|++||++ .++++|||+
T Consensus 230 ~~~~~~~~~~~l~~~~l~~~p~~Rp~~-----~~il~~~~~ 265 (265)
T cd08217 230 IPYRYSSELNEVIKSMLNVDPDKRPST-----EELLQLPLI 265 (265)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCH-----HHHhhCCCC
Confidence 677889999999999999999999998 899999995
No 178
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.7e-42 Score=337.82 Aligned_cols=251 Identities=29% Similarity=0.491 Sum_probs=211.5
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcC------
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDT------ 117 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~------ 117 (489)
+.|++.+.||+|+||.||+|.+..+++.||+|++.... .....+..|+.+++++ +||||++++++|.+.
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 56899999999999999999999999999999987542 2234567788899888 799999999998752
Q ss_pred CEEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCcccc
Q 011287 118 FSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPM 195 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~ 195 (489)
..+|+||||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++++++.++|+|||++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 4689999999999999998864 46899999999999999999999999999999999999999999999999998754
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhc-----CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLN-----SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~ 270 (489)
... ........|+..|+|||++. +..++.++|+|||||++|+|++|..||...........+...
T Consensus 162 ~~~----------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~ 231 (272)
T cd06637 162 DRT----------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN 231 (272)
T ss_pred ccc----------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC
Confidence 321 11233567999999999986 345788999999999999999999999876665554444332
Q ss_pred CC--CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 271 DI--RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 271 ~~--~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.. ..+..++.++.+|+.+||+.||.+||++ .+++.||||
T Consensus 232 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~il~~~~~ 272 (272)
T cd06637 232 PAPRLKSKKWSKKFQSFIESCLVKNHSQRPTT-----EQLMKHPFI 272 (272)
T ss_pred CCCCCCCCCcCHHHHHHHHHHcCCChhhCCCH-----HHHhhCCCC
Confidence 21 1234578999999999999999999998 899999998
No 179
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.7e-42 Score=338.34 Aligned_cols=246 Identities=27% Similarity=0.471 Sum_probs=207.4
Q ss_pred CCeEEeeEE--eeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEE
Q 011287 45 QDFELGKIY--GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 45 ~dy~~~~~L--G~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ly 121 (489)
++|++.+.+ |+|+||.||+++++.++..+|+|++.+..... .|..+...+ +||||+++++.|.....+|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 467777776 99999999999999999999999987543221 122222222 7999999999999999999
Q ss_pred EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC-CEEEeeccCccccCCccc
Q 011287 122 MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG-HIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g-~ikL~DFG~a~~~~~~~~ 200 (489)
+||||+++++|.+++...+.+++..++.++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++......
T Consensus 86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-- 163 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-- 163 (267)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC--
Confidence 9999999999999998888899999999999999999999999999999999999999998 9999999998754321
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHH----HHHHHHhcCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWL----IFQRIIARDIRFPN 276 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~----~~~~i~~~~~~~p~ 276 (489)
....|+..|+|||++.+..++.++|+|||||++|+|++|..||....... .+.........+++
T Consensus 164 ------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
T PHA03390 164 ------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIK 231 (267)
T ss_pred ------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCccc
Confidence 23468899999999999889999999999999999999999998654322 12222244456667
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.+++.+.+||.+||+.||.+||++ ++++++||||.+
T Consensus 232 ~~~~~~~~li~~~l~~~p~~R~~~----~~~~l~h~~~~~ 267 (267)
T PHA03390 232 NVSKNANDFVQSMLKYNINYRLTN----YNEIIKHPFLKI 267 (267)
T ss_pred ccCHHHHHHHHHHhccChhhCCch----HHHHhcCCcccC
Confidence 899999999999999999999964 388999999973
No 180
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-42 Score=362.76 Aligned_cols=250 Identities=26% Similarity=0.336 Sum_probs=206.2
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
...|.+.+.||+|+||.||+|.+..+++.||||.... ....+|+.+|++++|||||++++++......|+|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 4579999999999999999999999999999996421 2245699999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
||++. ++|..++... +.+++..++.++.||+.||.|||++||+||||||+||||+.++.++|+|||+++.+....
T Consensus 239 ~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~--- 314 (461)
T PHA03211 239 LPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW--- 314 (461)
T ss_pred EEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccc---
Confidence 99995 6898888764 569999999999999999999999999999999999999999999999999998653321
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCC--------CHHHHHHHHHhcCC--
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDT--------SEWLIFQRIIARDI-- 272 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~--------~~~~~~~~i~~~~~-- 272 (489)
........+||..|+|||++.+..++.++|||||||++|+|++|..|+... ....+.+.+.....
T Consensus 315 -----~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~ 389 (461)
T PHA03211 315 -----STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHV 389 (461)
T ss_pred -----ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccc
Confidence 111223467999999999999999999999999999999999987655322 12233333322111
Q ss_pred -CCCC-------------------------------CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 273 -RFPN-------------------------------YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 273 -~~p~-------------------------------~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.+|. .++.++.+||.+||+.||.+|||+ +++++||||+.
T Consensus 390 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa-----~elL~hp~f~~ 460 (461)
T PHA03211 390 DEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSA-----AELLRLPLFQS 460 (461)
T ss_pred ccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCH-----HHHhhCcccCC
Confidence 1111 245689999999999999999999 89999999974
No 181
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.6e-42 Score=341.93 Aligned_cols=254 Identities=31% Similarity=0.471 Sum_probs=215.1
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|.+..+++.||+|++.+..... .....+.+|+.+++.++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 47999999999999999999999999999999987653332 33455778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++++|..+....+.+++..+..++.||+.||.|||+.|++||||+|+||++++++.++|+|||++..+....
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~----- 154 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG----- 154 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-----
Confidence 999999888877766679999999999999999999999999999999999999999999999999987653321
Q ss_pred CCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC------------
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD------------ 271 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~------------ 271 (489)
.......++..|+|||++.+. .++.++|+|||||++|+|++|++||.+.+..+....+....
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07846 155 -----EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQ 229 (286)
T ss_pred -----cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhc
Confidence 112245688999999998754 47788999999999999999999998777655444433210
Q ss_pred -------CCC------------CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 -------IRF------------PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 -------~~~------------p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
..+ ++.++..+.+|+.+||+.||++||++ .+++.||||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~-----~~il~~~~~ 286 (286)
T cd07846 230 KNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSS-----SQLLHHEFF 286 (286)
T ss_pred cchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhH-----HHHhcCCCC
Confidence 011 23568899999999999999999999 899999998
No 182
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=8.5e-42 Score=338.24 Aligned_cols=253 Identities=28% Similarity=0.480 Sum_probs=213.7
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcC-----
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDT----- 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~----- 117 (489)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+..|..+++++ +|||++++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 588999999999999999999999999999999986532 2335567788899988 899999999998643
Q ss_pred CEEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCcc
Q 011287 118 FSLYMALESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVK 193 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~ 193 (489)
...|+||||+++++|.+++.. ...+++..++.++.|++.||.|||+.|++||||||+||+++.++.++|+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 468999999999999998763 3568999999999999999999999999999999999999999999999999987
Q ss_pred ccCCccccccCCCCCCCCccceecCCcCCChhhhcCCC-----CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 011287 194 PMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP-----ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRII 268 (489)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-----~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~ 268 (489)
...... .......|+..|+|||++.... ++.++|+|||||++|+|++|++||...+.......+.
T Consensus 177 ~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~ 246 (291)
T cd06639 177 QLTSTR----------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIP 246 (291)
T ss_pred hccccc----------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHh
Confidence 654321 1122346889999999986432 6789999999999999999999998877655555554
Q ss_pred hcC---CCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 269 ARD---IRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 269 ~~~---~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
... ...|..++..+.+||.+||+.||++||++ .++++||||+
T Consensus 247 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~-----~~il~~~~~~ 291 (291)
T cd06639 247 RNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSV-----THLLEHPFIK 291 (291)
T ss_pred cCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCH-----HHHhcCcccC
Confidence 432 23355678899999999999999999998 8999999994
No 183
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=6.5e-42 Score=332.86 Aligned_cols=257 Identities=34% Similarity=0.551 Sum_probs=225.1
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|++|.||+|++..+++.||+|++...... .....+.+|+.++.+++||||+++++++.....+|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 4799999999999999999999999999999998765322 34566788999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||+++++|.+++...+.+++..+..++.|++.||.|||+ .|++||||+|+||+++.++.++|+|||.+.......
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~---- 154 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL---- 154 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC----
Confidence 999999999999988889999999999999999999999 999999999999999999999999999987653321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCC---CHHHHHHHHHhc-CCCCCCC-C
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDT---SEWLIFQRIIAR-DIRFPNY-F 278 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~---~~~~~~~~i~~~-~~~~p~~-~ 278 (489)
.......++..|+|||.+.+..++.++|+||||+++|+|++|..||... ........+... ...++.. +
T Consensus 155 ------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (264)
T cd06623 155 ------DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEF 228 (264)
T ss_pred ------CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccC
Confidence 1123557899999999999988999999999999999999999999877 444555555543 3345556 8
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
+..+.++|.+||..+|++||++ .++++||||+.++
T Consensus 229 ~~~l~~li~~~l~~~p~~R~~~-----~~ll~~~~~~~~~ 263 (264)
T cd06623 229 SPEFRDFISACLQKDPKKRPSA-----AELLQHPFIKKAD 263 (264)
T ss_pred CHHHHHHHHHHccCChhhCCCH-----HHHHhCHHHHhcc
Confidence 9999999999999999999998 8999999998654
No 184
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.8e-42 Score=335.23 Aligned_cols=256 Identities=30% Similarity=0.531 Sum_probs=215.6
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccc-------hhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-------ENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF 118 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~-------~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 118 (489)
.|.+.+.||.|+||.||+|.+..+|+.||+|.+....... ....+.+..|..+++.++||||+++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 5889999999999999999999999999999886432111 112346778999999999999999999999999
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.+|+||||+.+++|.+++.+.+.+++..++.++.||+.||.|||++|++||||+|+||+++.++.++|+|||+++.....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 161 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI 161 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999998754321
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCC--CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--CCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSP--ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR--DIRF 274 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~--~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~--~~~~ 274 (489)
. .........|+..|+|||.+.... ++.++|+||||+++|+|++|..||...........+... ...+
T Consensus 162 ~--------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 233 (272)
T cd06629 162 Y--------DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPI 233 (272)
T ss_pred c--------cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcC
Confidence 1 111223456889999999987654 789999999999999999999999876655444433322 2333
Q ss_pred CC----CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 275 PN----YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 275 p~----~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
|. .++.++.++|.+||..||++||++ +++++||||
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~~~~ 272 (272)
T cd06629 234 PPDVSMNLSPVALDFLNACFTINPDNRPTA-----RELLQHPFI 272 (272)
T ss_pred CccccccCCHHHHHHHHHHhcCChhhCCCH-----HHHhhCCCC
Confidence 33 458999999999999999999998 899999997
No 185
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.3e-41 Score=332.27 Aligned_cols=257 Identities=28% Similarity=0.497 Sum_probs=220.6
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeeccc--ccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC--CEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKF--ITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT--FSL 120 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~--~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~l 120 (489)
.+|++.+.||+|+||.||+|++..+++.||+|.+.... .........+.+|+.+++.++||||+++++.+.+. ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 68999999999999999999999999999999875432 12233456788899999999999999999998764 568
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
++||||+++++|.+++...+.+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||+++......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 160 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC- 160 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccc-
Confidence 9999999999999999887889999999999999999999999999999999999999999999999999998653211
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--CCCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR--DIRFPNYF 278 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~--~~~~p~~~ 278 (489)
..........|+..|+|||.+.+..++.++|+|||||++|+|++|++||...........+... ...+|..+
T Consensus 161 ------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~ 234 (264)
T cd06653 161 ------MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGV 234 (264)
T ss_pred ------ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCccc
Confidence 0111223457899999999999888999999999999999999999999887766655555433 34578899
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
++++.++|++||+ +|.+||++ .+++.|||.
T Consensus 235 ~~~~~~~i~~~l~-~~~~r~~~-----~~~~~~~~~ 264 (264)
T cd06653 235 SDACRDFLKQIFV-EEKRRPTA-----EFLLRHPFV 264 (264)
T ss_pred CHHHHHHHHHHhc-CcccCccH-----HHHhcCCCC
Confidence 9999999999998 57999999 889999983
No 186
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.4e-42 Score=333.62 Aligned_cols=251 Identities=31% Similarity=0.499 Sum_probs=218.5
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.++|++.+.||.|+||.||+|++..+++.||+|.+.... ....+.+|+.+++.++||||+++++.+.+...+|++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence 368999999999999999999999999999999986542 156788899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
+||+.+++|.+++... ..+++..++.++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++.......
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--- 153 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--- 153 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc---
Confidence 9999999999999753 568999999999999999999999999999999999999999999999999988654321
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc---CCCCCCCCC
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR---DIRFPNYFS 279 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~---~~~~p~~~~ 279 (489)
.......|+..|+|||++.+..++.++|+||||||+|+|++|+.||...+.......+... ....+..++
T Consensus 154 -------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (256)
T cd06612 154 -------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWS 226 (256)
T ss_pred -------cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcC
Confidence 1223456889999999999989999999999999999999999999887665444333222 233455678
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
..+.++|.+||+.||++||++ .+++.||||
T Consensus 227 ~~~~~~i~~~l~~~P~~Rps~-----~~il~~~~~ 256 (256)
T cd06612 227 PEFNDFVKKCLVKDPEERPSA-----IQLLQHPFI 256 (256)
T ss_pred HHHHHHHHHHHhcChhhCcCH-----HHHhcCCCC
Confidence 999999999999999999998 899999997
No 187
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=7.5e-42 Score=331.32 Aligned_cols=253 Identities=32% Similarity=0.536 Sum_probs=220.1
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeeccccc--chhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT--KENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
+|+..+.||+|+||.||+|.+..++..||+|.+...... .......+.+|+.+++.++||||+++++++.+...+|+|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 478889999999999999999989999999998654321 123445678899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
+||+++++|.+++.+.+.+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---- 156 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc----
Confidence 9999999999999988889999999999999999999999999999999999999999999999999987653321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCC-CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh--cCCCCCCCCCH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSP-ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA--RDIRFPNYFSD 280 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~--~~~~~p~~~~~ 280 (489)
......|+..|+|||.+.... ++.++|+|||||++|+|++|+.||...........+.. ....+|..+++
T Consensus 157 -------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (258)
T cd06632 157 -------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSD 229 (258)
T ss_pred -------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCH
Confidence 123456889999999997776 89999999999999999999999988776555544443 23456778899
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.+.+++.+||+.+|++||++ .+++.|||+
T Consensus 230 ~~~~li~~~l~~~p~~Rp~~-----~~~l~~~~~ 258 (258)
T cd06632 230 EAKDFILKCLQRDPSLRPTA-----AELLEHPFV 258 (258)
T ss_pred HHHHHHHHHhhcCcccCcCH-----HHHhcCCCC
Confidence 99999999999999999998 899999996
No 188
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.8e-42 Score=356.31 Aligned_cols=250 Identities=22% Similarity=0.395 Sum_probs=207.0
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCC-----CcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDT-----GTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQ 115 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~t-----g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 115 (489)
+..++|++++.||+|+||.||+|++..+ +..||+|++.... .......+.+|+.+++.+ +||||+++++.+.
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 4567899999999999999999996544 4579999997543 223355677899999999 8999999999999
Q ss_pred cCCEEEEEEeccCCCChHHHHHhC--------------------------------------------------------
Q 011287 116 DTFSLYMALESCEGGELFDQITSK-------------------------------------------------------- 139 (489)
Q Consensus 116 ~~~~lylV~E~~~gg~L~~~l~~~-------------------------------------------------------- 139 (489)
+...+|+|||||.+|+|.+++.+.
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 999999999999999999988642
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 140 --------------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 140 --------------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
.++++..+..++.||+.||.|||++||+||||||+|||++.+++++|+|||+++.+.....
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~----- 267 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN----- 267 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-----
Confidence 2478889999999999999999999999999999999999999999999999876532210
Q ss_pred CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc--CCCCCCCCCHHH
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR--DIRFPNYFSDAA 282 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~--~~~~p~~~~~~~ 282 (489)
.....+..++..|+|||++.+..++.++|||||||++|+|++ |+.||........+..+... ....|...++++
T Consensus 268 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 344 (374)
T cd05106 268 ---YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEI 344 (374)
T ss_pred ---eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHH
Confidence 011112335668999999998899999999999999999997 99999876554444444433 344566789999
Q ss_pred HHHHHHhhccCCCCCCCCC
Q 011287 283 RDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 283 ~~Li~~~L~~dP~~R~t~~ 301 (489)
+++|.+||+.||.+||++.
T Consensus 345 ~~li~~cl~~dp~~RPs~~ 363 (374)
T cd05106 345 YSIMKMCWNLEPTERPTFS 363 (374)
T ss_pred HHHHHHHcCCChhhCcCHH
Confidence 9999999999999999983
No 189
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.1e-41 Score=329.98 Aligned_cols=252 Identities=28% Similarity=0.500 Sum_probs=221.5
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||+|+||.||+|.+..+++.+|+|.+....... .....+.+|+.+++.++||||+++++.+.....+++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-DERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-HHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 5899999999999999999999999999999998664433 335668889999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC-CEEEeeccCccccCCccccc
Q 011287 126 SCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG-HIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 126 ~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g-~ikL~DFG~a~~~~~~~~~~ 202 (489)
|+++++|.+++... ..+++..+..++.|++.||.|||++|++||||+|+||+++.++ .++|+|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---- 155 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK---- 155 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC----
Confidence 99999999999764 3489999999999999999999999999999999999998654 5799999998865432
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-CCCCCCCCHH
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD-IRFPNYFSDA 281 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~-~~~p~~~~~~ 281 (489)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+.+.......+.... ..+|..++.+
T Consensus 156 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
T cd08220 156 -------SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPD 228 (256)
T ss_pred -------ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHH
Confidence 11224578999999999998889999999999999999999999999887777666665543 4567789999
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 282 ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 282 ~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
+.++|.+||..||++||++ .++++||||
T Consensus 229 l~~li~~~l~~~p~~Rpt~-----~~ll~~p~~ 256 (256)
T cd08220 229 LRQLILSMLNLDPSKRPQL-----SQIMAQPIC 256 (256)
T ss_pred HHHHHHHHccCChhhCCCH-----HHHhhCCCC
Confidence 9999999999999999999 899999997
No 190
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.2e-42 Score=334.77 Aligned_cols=252 Identities=30% Similarity=0.511 Sum_probs=213.6
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCC----
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTF---- 118 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~---- 118 (489)
.++|++.+.||.|++|.||+|.++.+++.||+|++.... .....+.+|+.+++++ +||||+++++.+.+..
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 489999999999999999999999999999999987542 2335678899999998 7999999999997644
Q ss_pred --EEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCc
Q 011287 119 --SLYMALESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 119 --~lylV~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a 192 (489)
.+|+||||+++++|.+++.. .+.+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 58999999999999998865 357999999999999999999999999999999999999999999999999998
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcC-----CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHH
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS-----SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i 267 (489)
....... .......|+..|+|||++.. ..++.++|+|||||++|+|++|.+||...+.......+
T Consensus 161 ~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 230 (275)
T cd06608 161 AQLDSTL----------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKI 230 (275)
T ss_pred eecccch----------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHh
Confidence 7543221 12234578999999999853 34678899999999999999999999877666555555
Q ss_pred HhcCC---CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 268 IARDI---RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 268 ~~~~~---~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
..... ..+..++.++++||.+||..||++||++ .++++|||+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~-----~~ll~~~~~ 275 (275)
T cd06608 231 PRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFM-----EELLEHPFI 275 (275)
T ss_pred hccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCH-----HHHhcCCCC
Confidence 54322 2234478899999999999999999998 899999996
No 191
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-43 Score=351.43 Aligned_cols=258 Identities=29% Similarity=0.458 Sum_probs=211.2
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~l 120 (489)
..-..|++++.||+||-+.||++...+ .+.||+|.+.-. ........-..+|+.+|.+| .|.+||+||++-..++.+
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 344569999999999999999999855 455666544222 23445566788899999999 599999999999999999
Q ss_pred EEEEeccCCCChHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 121 YMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~-l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
|+||||=+ .||...|++.+. .+...+++|..|++.|+.++|++||||.||||.|+|+- .|.+||+|||.|..+....
T Consensus 436 YmvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 436 YMVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT 513 (677)
T ss_pred EEEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccc
Confidence 99999865 499999988754 44469999999999999999999999999999999984 7899999999999876554
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCC-----------CCCCCcchhhhHHHHHHhhCCCCCCCCC-HHHHHHHH
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSP-----------ATFGNDLWALGCTLYQMLSGTSPFKDTS-EWLIFQRI 267 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-----------~~~~sDiwSLG~ilyelltG~~PF~~~~-~~~~~~~i 267 (489)
..+ ...+.+||+.|||||.+.... .+.++||||||||||+|+.|++||.... .+.-+..|
T Consensus 514 TsI--------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI 585 (677)
T KOG0596|consen 514 TSI--------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAI 585 (677)
T ss_pred cce--------eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhh
Confidence 222 233669999999999985332 4678999999999999999999997643 44455566
Q ss_pred HhcC--CCCCCCCCHH-HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 268 IARD--IRFPNYFSDA-ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 268 ~~~~--~~~p~~~~~~-~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
...+ ++||..-+.. +.++++.||..||.+||++ .+||+|||...
T Consensus 586 ~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si-----~eLLqhpFl~~ 632 (677)
T KOG0596|consen 586 TDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSI-----PELLQHPFLQI 632 (677)
T ss_pred cCCCccccccCCCCchHHHHHHHHHHhcCcccCCCc-----HHHhcCccccc
Confidence 6553 4787765555 9999999999999999999 88999999975
No 192
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.7e-42 Score=339.80 Aligned_cols=256 Identities=29% Similarity=0.459 Sum_probs=220.0
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
+..++|++++.||+|+||+||+|.+..+|+.||+|++.... .......+.+|+.+++.++||||+++++.+.+...+|
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 79 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNIC 79 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEE
Confidence 35679999999999999999999999999999999986542 2334566788999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 122 MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
+||||+++++|.+++.+.+.+++..++.++.+++.||.|||+ .|++||||+|+||+++.++.++|+|||++......
T Consensus 80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~-- 157 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS-- 157 (284)
T ss_pred EEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh--
Confidence 999999999999999888889999999999999999999997 69999999999999999999999999998654221
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHH-----------HHHHHHHh
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEW-----------LIFQRIIA 269 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~-----------~~~~~i~~ 269 (489)
.....+|+..|+|||++.+..++.++|+|||||++|+|++|..||...... .....+..
T Consensus 158 ----------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd06620 158 ----------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ 227 (284)
T ss_pred ----------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh
Confidence 122457899999999998888999999999999999999999999865542 23333333
Q ss_pred cC-CCCCCC-CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 270 RD-IRFPNY-FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 270 ~~-~~~p~~-~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.. ..++.. ++.++.+||.+||+.||.+||++ .++++|+||..
T Consensus 228 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~-----~e~~~~~~~~~ 271 (284)
T cd06620 228 EPPPRLPSSDFPEDLRDFVDACLLKDPTERPTP-----QQLCAMPPFIQ 271 (284)
T ss_pred ccCCCCCchhcCHHHHHHHHHHhcCCcccCcCH-----HHHhcCccccc
Confidence 22 233333 78899999999999999999999 89999999953
No 193
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=7.3e-42 Score=341.21 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=205.3
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcC----------------CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCC
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKID----------------TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~----------------tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp 105 (489)
+..++|++.+.||+|+||.||+|++.. ++..||+|++.... .......+.+|+.++++++||
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~ 79 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDP 79 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCC
Confidence 346799999999999999999998643 34579999986542 233455678899999999999
Q ss_pred CccEEEEEEEcCCEEEEEEeccCCCChHHHHHhCC-------------------CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 011287 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQITSKG-------------------HLSEDEARFYTAEVVDALEYIHSMGL 166 (489)
Q Consensus 106 nIv~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~~-------------------~l~e~~~~~i~~qil~aL~~LH~~gI 166 (489)
||+++++++.+....|+||||+.+|+|.+++.... .+++..+..++.||+.||.|||+.||
T Consensus 80 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i 159 (304)
T cd05096 80 NIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF 159 (304)
T ss_pred CeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence 99999999999999999999999999999986532 36778899999999999999999999
Q ss_pred EeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHH
Q 011287 167 IHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLY 246 (489)
Q Consensus 167 iHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ily 246 (489)
+||||||+|||++.++.+||+|||+++.+..... ........++..|+|||++....++.++|||||||++|
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 231 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY--------YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLW 231 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCce--------eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHH
Confidence 9999999999999999999999999976533211 01122345678899999998888999999999999999
Q ss_pred HHhh--CCCCCCCCCHHHHHHHHHh--------cCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 247 QMLS--GTSPFKDTSEWLIFQRIIA--------RDIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 247 ellt--G~~PF~~~~~~~~~~~i~~--------~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
+|++ +..||...+.......+.. .....|..++..+.+|+.+||+.||++||++
T Consensus 232 el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~ 295 (304)
T cd05096 232 EILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSF 295 (304)
T ss_pred HHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCH
Confidence 9986 6788988776655544321 1123456788999999999999999999998
No 194
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=8.4e-42 Score=348.42 Aligned_cols=253 Identities=25% Similarity=0.430 Sum_probs=211.9
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC------
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT------ 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 117 (489)
.++|++.+.||+|+||.||+|++..+|+.||+|++.+.... ......+.+|+.++++++||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN-VTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC-hhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 57899999999999999999999999999999998654322 23334566799999999999999999988643
Q ss_pred CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 118 FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
..+|+||||+.+ +|.+.+... +++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 357999999965 888888754 99999999999999999999999999999999999999999999999999976532
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC------
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD------ 271 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~------ 271 (489)
.. ......|++.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+....+.++....
T Consensus 171 ~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 239 (353)
T cd07850 171 SF-----------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDE 239 (353)
T ss_pred CC-----------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 21 1234568899999999999999999999999999999999999999877655554443210
Q ss_pred ----------------C--------------CC-------CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 ----------------I--------------RF-------PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 ----------------~--------------~~-------p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
. .+ +...+..+++||.+||+.||++||++ .+++.||||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~eiL~~~~~ 314 (353)
T cd07850 240 FMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISV-----DDALQHPYI 314 (353)
T ss_pred HHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCH-----HHHhcChhH
Confidence 0 00 11246678999999999999999999 899999999
Q ss_pred CC
Q 011287 315 KG 316 (489)
Q Consensus 315 ~~ 316 (489)
+.
T Consensus 315 ~~ 316 (353)
T cd07850 315 NV 316 (353)
T ss_pred hh
Confidence 83
No 195
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.2e-41 Score=335.23 Aligned_cols=256 Identities=25% Similarity=0.445 Sum_probs=208.8
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHH-HHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERI-VLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~-il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
++|++.+.||+|+||.||+|+++.+|+.||+|.+.+...... ... +..|.. .++.++||||+++++++.+...+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~-~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE-QKR-LLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH-HHH-HHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 589999999999999999999999999999999876533222 223 333544 46777999999999999999999999
Q ss_pred EeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 124 LESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSM-GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~-gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
|||++ |+|.+++.. ...+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||++..+...
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99997 588777754 24689999999999999999999997 9999999999999999999999999998765321
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcC----CCCCCCCcchhhhHHHHHHhhCCCCCCCC-CHHHHHHHHHh-cCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNS----SPATFGNDLWALGCTLYQMLSGTSPFKDT-SEWLIFQRIIA-RDI 272 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~----~~~~~~sDiwSLG~ilyelltG~~PF~~~-~~~~~~~~i~~-~~~ 272 (489)
.......|+..|+|||++.+ ..++.++|+|||||++|+|++|+.||... +..+....+.. ...
T Consensus 158 -----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd06617 158 -----------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSP 226 (283)
T ss_pred -----------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCC
Confidence 11123568899999999865 45688999999999999999999999753 22333333333 233
Q ss_pred CCC-CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCc
Q 011287 273 RFP-NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDW 319 (489)
Q Consensus 273 ~~p-~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~ 319 (489)
.+| ..++.++.++|.+||..+|.+||++ .++++||||.....
T Consensus 227 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~~~~ 269 (283)
T cd06617 227 QLPAEKFSPEFQDFVNKCLKKNYKERPNY-----PELLQHPFFELHLS 269 (283)
T ss_pred CCCccccCHHHHHHHHHHccCChhhCcCH-----HHHhcCchhhhccc
Confidence 444 3578999999999999999999998 89999999987543
No 196
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=8.9e-42 Score=336.85 Aligned_cols=253 Identities=29% Similarity=0.486 Sum_probs=211.6
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEE-----c
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQ-----D 116 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-----~ 116 (489)
..++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|..+++.+ +||||+++++++. +
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 4689999999999999999999999999999999876431 2234567799999998 7999999999873 4
Q ss_pred CCEEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCc
Q 011287 117 TFSLYMALESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a 192 (489)
....|+||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 5679999999999999988753 356899999999999999999999999999999999999999999999999998
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcC-----CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHH
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS-----SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i 267 (489)
..+.... .......|++.|+|||++.. ..++.++|+|||||++|+|++|+.||...+.......+
T Consensus 172 ~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~ 241 (286)
T cd06638 172 AQLTSTR----------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKI 241 (286)
T ss_pred eecccCC----------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhc
Confidence 7653321 12234468999999999853 44788999999999999999999999887665544433
Q ss_pred Hhc---CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 268 IAR---DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 268 ~~~---~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
... ....|..++..+.+||.+||+.||++||++ .++++|+||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~ell~~~~~ 286 (286)
T cd06638 242 PRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTV-----SDLLQHVFI 286 (286)
T ss_pred cccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCH-----HHHhhcccC
Confidence 322 222455678899999999999999999998 899999997
No 197
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.5e-42 Score=337.26 Aligned_cols=255 Identities=31% Similarity=0.477 Sum_probs=216.5
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|.+..+++.||+|++...... ......+.+|+.+++.++|+||+++++.+.+....|+||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD-EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc-ccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 4799999999999999999999999999999998654322 233456778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||++++.+..+..+...+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~----- 154 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP----- 154 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc-----
Confidence 999987777666666779999999999999999999999999999999999999999999999999987654321
Q ss_pred CCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-------------
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR------------- 270 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~------------- 270 (489)
......+.++..|+|||++.+. .++.++|+|||||++|+|++|++||.+.+.......+...
T Consensus 155 ----~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 155 ----ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred ----cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 1122346788999999999888 7899999999999999999999999877665443332210
Q ss_pred -------------------CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 271 -------------------DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 271 -------------------~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
...+|..++.++.+||++||..||++||++ +++++||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~~~~f 288 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTC-----DELLQHPYF 288 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccH-----HHHhcCCCC
Confidence 001344468999999999999999999998 899999998
No 198
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=8.1e-42 Score=329.78 Aligned_cols=250 Identities=45% Similarity=0.805 Sum_probs=227.0
Q ss_pred EeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCCCh
Q 011287 53 YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGEL 132 (489)
Q Consensus 53 LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L 132 (489)
||.|+||.||.|.+..+++.||+|++.+...........+..|+.+++.++||||+++++.+.+...+|+||||+.+++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999999989999999999887666666677788899999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCc
Q 011287 133 FDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212 (489)
Q Consensus 133 ~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~ 212 (489)
.+++...+.+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----------~~~ 150 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----------SRT 150 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC----------Ccc
Confidence 9999988889999999999999999999999999999999999999999999999999987653321 122
Q ss_pred cceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhhcc
Q 011287 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRLLDV 292 (489)
Q Consensus 213 ~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L~~ 292 (489)
....++..|+|||.+.+...+.++|+|||||++|+|++|..||...+.....+.+......+|..++..+.++|++||..
T Consensus 151 ~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~ 230 (250)
T cd05123 151 NTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQK 230 (250)
T ss_pred cCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcC
Confidence 34568899999999988888999999999999999999999999888877888888888889999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHhcCCCC
Q 011287 293 DPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 293 dP~~R~t~~~~~~~~l~~hpff 314 (489)
||++||++.. ..++++||||
T Consensus 231 ~p~~R~~~~~--~~~l~~~~~f 250 (250)
T cd05123 231 DPTKRLGSGG--AEEIKAHPFF 250 (250)
T ss_pred CHhhCCCccc--HHHHHhCCCC
Confidence 9999999854 5789999998
No 199
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.8e-42 Score=344.78 Aligned_cols=248 Identities=27% Similarity=0.400 Sum_probs=194.6
Q ss_pred EeeEEeeeCceEEEEEEEcC--CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEE--cCCEEEEEE
Q 011287 49 LGKIYGVGSYSKVVRAKKID--TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQ--DTFSLYMAL 124 (489)
Q Consensus 49 ~~~~LG~G~~g~Vy~a~~~~--tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~lylV~ 124 (489)
.++.||+|+||.||+|+++. ++..||+|.+..... ...+.+|+.+++.++||||+++++++. ....+|+||
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEE
Confidence 34689999999999999754 678999999865422 234667999999999999999999885 456789999
Q ss_pred eccCCCChHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeee----CCCCCEEEeeccC
Q 011287 125 ESCEGGELFDQITSK---------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLL----TADGHIKIADFGS 191 (489)
Q Consensus 125 E~~~gg~L~~~l~~~---------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl----~~~g~ikL~DFG~ 191 (489)
||+.+ +|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 99975 888877532 248899999999999999999999999999999999999 5667999999999
Q ss_pred ccccCCccccccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHH---------
Q 011287 192 VKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEW--------- 261 (489)
Q Consensus 192 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~--------- 261 (489)
++....... ........+||+.|+|||++.+. .++.++|||||||++|+|++|.+||....+.
T Consensus 159 a~~~~~~~~-------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~ 231 (317)
T cd07867 159 ARLFNSPLK-------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHH 231 (317)
T ss_pred eeccCCCcc-------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccH
Confidence 986543221 11223356889999999998764 5789999999999999999999999754321
Q ss_pred HHHHHHHhc--------------CC------------------------CCCCCCCHHHHHHHHHhhccCCCCCCCCCCC
Q 011287 262 LIFQRIIAR--------------DI------------------------RFPNYFSDAARDLIDRLLDVDPSGRPGAGPG 303 (489)
Q Consensus 262 ~~~~~i~~~--------------~~------------------------~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~ 303 (489)
.....+... .. ......+..+.+||.+||+.||.+|||+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~--- 308 (317)
T cd07867 232 DQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITS--- 308 (317)
T ss_pred HHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCH---
Confidence 011111100 00 0011235678899999999999999999
Q ss_pred CHHHHhcCCCC
Q 011287 304 GYAVLKMHPFF 314 (489)
Q Consensus 304 ~~~~l~~hpff 314 (489)
+++++||||
T Consensus 309 --~e~l~hp~f 317 (317)
T cd07867 309 --EQALQDPYF 317 (317)
T ss_pred --HHHhcCCCC
Confidence 899999998
No 200
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.3e-41 Score=331.89 Aligned_cols=246 Identities=21% Similarity=0.346 Sum_probs=213.7
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
+...+|.+.+.||+|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.++||||+++++++.....++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 34578999999999999999999999999999999986542 22445777999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 122 MALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+||||+++++|.+++... ..+++..++.++.|++.||.|||++|++||||||+||++++++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 999999999999998764 358999999999999999999999999999999999999999999999999998654322
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNY 277 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~ 277 (489)
.. ......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+....++.+... ...+|..
T Consensus 159 ~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 229 (263)
T cd05052 159 YT---------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEG 229 (263)
T ss_pred ee---------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
Confidence 11 1112234567999999998899999999999999999998 99999988887777776653 4567788
Q ss_pred CCHHHHHHHHHhhccCCCCCCCC
Q 011287 278 FSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 278 ~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
++.++.++|.+||+.||++||++
T Consensus 230 ~~~~~~~li~~cl~~~p~~Rp~~ 252 (263)
T cd05052 230 CPPKVYELMRACWQWNPSDRPSF 252 (263)
T ss_pred CCHHHHHHHHHHccCCcccCCCH
Confidence 99999999999999999999998
No 201
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=5e-42 Score=337.69 Aligned_cols=256 Identities=31% Similarity=0.471 Sum_probs=222.1
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
..|+..+.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||+++++.+.+....|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 468899999999999999999999999999999875422 234566788999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||++||+|.+++.. +.+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----- 155 (277)
T cd06640 82 EYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----- 155 (277)
T ss_pred ecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-----
Confidence 99999999998875 579999999999999999999999999999999999999999999999999987653321
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-CCCCCCCCCHHHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-DIRFPNYFSDAAR 283 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-~~~~p~~~~~~~~ 283 (489)
.......++..|+|||++.+..++.++|+|||||++|+|++|.+||...+.......+... ...++..++..+.
T Consensus 156 -----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (277)
T cd06640 156 -----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFK 230 (277)
T ss_pred -----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHH
Confidence 1123456888999999999888999999999999999999999999887766655544333 3345566889999
Q ss_pred HHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 284 DLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 284 ~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
++|.+||+.+|++||++ .+++.||||....
T Consensus 231 ~li~~~l~~~p~~Rp~~-----~~il~~~~~~~~~ 260 (277)
T cd06640 231 EFIDACLNKDPSFRPTA-----KELLKHKFIVKNA 260 (277)
T ss_pred HHHHHHcccCcccCcCH-----HHHHhChHhhhcc
Confidence 99999999999999998 8999999997654
No 202
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.8e-42 Score=354.01 Aligned_cols=253 Identities=24% Similarity=0.368 Sum_probs=207.5
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEE-----cCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEc
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKK-----IDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQD 116 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~-----~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 116 (489)
..++|++++.||+|+||.||+|++ ..++..||+|++..... ......+.+|+.+++.+ +||||+++++++.+
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 345899999999999999999974 45678999999864422 22345677899999999 89999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhCC--------------------------------------------------------
Q 011287 117 TFSLYMALESCEGGELFDQITSKG-------------------------------------------------------- 140 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~~-------------------------------------------------------- 140 (489)
....|+|||||++|+|.+++....
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVR 190 (375)
T ss_pred CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccc
Confidence 999999999999999999986532
Q ss_pred -------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 141 -------------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 141 -------------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~- 269 (375)
T cd05104 191 SGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN- 269 (375)
T ss_pred cceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc-
Confidence 367888999999999999999999999999999999999999999999999986543210
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC--CCCCCCC
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD--IRFPNYF 278 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~--~~~p~~~ 278 (489)
........++..|+|||++.+..++.++|||||||++|+|++ |..||........+.+..... ...|...
T Consensus 270 -------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (375)
T cd05104 270 -------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECA 342 (375)
T ss_pred -------ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCC
Confidence 011122345678999999999999999999999999999998 999998765444333333332 3346667
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
+.++.+||.+||+.||++||++ .++++
T Consensus 343 ~~~l~~li~~cl~~dP~~RPs~-----~eil~ 369 (375)
T cd05104 343 PSEMYDIMKSCWDADPLKRPTF-----KQIVQ 369 (375)
T ss_pred CHHHHHHHHHHccCChhHCcCH-----HHHHH
Confidence 8999999999999999999998 55653
No 203
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.1e-41 Score=337.40 Aligned_cols=249 Identities=20% Similarity=0.344 Sum_probs=213.4
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEc-----CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKI-----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD 116 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~-----~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 116 (489)
+..++|.+.+.||+|+||.||++... .++..+|+|.+... .......+.+|+.++++++||||+++++++.+
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 45689999999999999999999862 35677999988654 23345567889999999999999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhCC-------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCC
Q 011287 117 TFSLYMALESCEGGELFDQITSKG-------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH 183 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~~-------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ 183 (489)
...+|+||||+++++|.+++...+ .+++..+..++.||+.||+|||++|++||||||+||+++.++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 999999999999999999997543 3899999999999999999999999999999999999999999
Q ss_pred EEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHH
Q 011287 184 IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWL 262 (489)
Q Consensus 184 ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~ 262 (489)
++|+|||++........ ........++..|+|||++.+..++.++|+|||||++|+|++ |.+||...+...
T Consensus 159 ~kl~dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~ 230 (288)
T cd05093 159 VKIGDFGMSRDVYSTDY--------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 230 (288)
T ss_pred EEeccCCccccccCCce--------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999875532211 011123346788999999998889999999999999999998 999999888887
Q ss_pred HHHHHHhcC-CCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 263 IFQRIIARD-IRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 263 ~~~~i~~~~-~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
....+.... ...+..++.++.+|+.+||+.||.+||++.
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~ 270 (288)
T cd05093 231 VIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIK 270 (288)
T ss_pred HHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence 777777665 345667899999999999999999999983
No 204
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.4e-41 Score=336.54 Aligned_cols=254 Identities=26% Similarity=0.435 Sum_probs=207.5
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
.+++|++.+.||+|++|.||+|+++.+++.||+|.+...... .......+|+.+++.++||||+++++++.+....|+
T Consensus 3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (291)
T cd07844 3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTL 80 (291)
T ss_pred CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEE
Confidence 368999999999999999999999999999999998754321 122345579999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 123 ALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
||||+.+ +|.+++.+. +.+++..++.++.|++.||.|||++||+||||||+||+++.+|.++|+|||++.......
T Consensus 81 v~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 81 VFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 9999985 999988764 468999999999999999999999999999999999999999999999999986432211
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCC-HHHHHHHHHhc---------
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTS-EWLIFQRIIAR--------- 270 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~-~~~~~~~i~~~--------- 270 (489)
.......++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.. .......+...
T Consensus 158 --------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (291)
T cd07844 158 --------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETW 229 (291)
T ss_pred --------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhh
Confidence 11122356889999999875 457889999999999999999999997765 22222222110
Q ss_pred ----------CCCC-----------CCCCC--HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 271 ----------DIRF-----------PNYFS--DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 271 ----------~~~~-----------p~~~~--~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
...+ ...++ .++.++|.+||+.||++||++ .+++.||||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~-----~e~l~~~~f 291 (291)
T cd07844 230 PGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISA-----AEAMKHPYF 291 (291)
T ss_pred hhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCH-----HHHhcCCCC
Confidence 0000 01234 888999999999999999998 899999998
No 205
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.1e-41 Score=335.87 Aligned_cols=252 Identities=29% Similarity=0.503 Sum_probs=211.3
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEc------
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQD------ 116 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~------ 116 (489)
.+.|++.+.||.|+||.||+|++..+++.||+|++... ......+..|+.+++++ +||||++++++|..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 47899999999999999999999999999999998654 22334577788888888 79999999999853
Q ss_pred CCEEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 117 TFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
...+|++|||+.+|+|.+++... ..+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 46789999999999999998763 4589999999999999999999999999999999999999999999999999875
Q ss_pred cCCccccccCCCCCCCCccceecCCcCCChhhhc-----CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh
Q 011287 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLN-----SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA 269 (489)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~ 269 (489)
.... ........|+..|+|||++. ...++.++|+|||||++|+|++|.+||...........+..
T Consensus 171 ~~~~----------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~ 240 (282)
T cd06636 171 LDRT----------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR 240 (282)
T ss_pred hhcc----------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh
Confidence 4321 11223567999999999985 34578899999999999999999999987665544443333
Q ss_pred cCC-C-CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 270 RDI-R-FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 270 ~~~-~-~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
... . .+..++.++.+||++||+.||.+||++ .++++||||
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-----~ell~~~~~ 282 (282)
T cd06636 241 NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPST-----EQLLKHPFI 282 (282)
T ss_pred CCCCCCcccccCHHHHHHHHHHhCCChhhCcCH-----HHHhcCCCC
Confidence 221 1 223578999999999999999999998 899999997
No 206
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.8e-41 Score=328.71 Aligned_cols=257 Identities=32% Similarity=0.598 Sum_probs=219.2
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||+|+||.||+|.+..+++.||+|++...... ......+..|+.+++.++|+||+++++.+.+...+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 589999999999999999999999999999999766433 3456778889999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 126 SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
|+++++|.+++.+.+.+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~--- 156 (264)
T cd06626 80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM--- 156 (264)
T ss_pred cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc---
Confidence 99999999999987789999999999999999999999999999999999999999999999999988764432110
Q ss_pred CCCCCCccceecCCcCCChhhhcCCC---CCCCCcchhhhHHHHHHhhCCCCCCCCC-HHHHHHHHHh-cCCCCCCCC--
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNSSP---ATFGNDLWALGCTLYQMLSGTSPFKDTS-EWLIFQRIIA-RDIRFPNYF-- 278 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~~~---~~~~sDiwSLG~ilyelltG~~PF~~~~-~~~~~~~i~~-~~~~~p~~~-- 278 (489)
........++..|+|||++.+.. ++.++|+|||||++|+|++|+.||.+.. .......+.. ....+|...
T Consensus 157 ---~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (264)
T cd06626 157 ---GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQL 233 (264)
T ss_pred ---cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCccccc
Confidence 01122356889999999998766 8899999999999999999999997653 3333323322 334556544
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
++.+.+||.+||+.||.+||++ .+++.|||+
T Consensus 234 ~~~~~~li~~~l~~~p~~R~~~-----~~i~~~~~~ 264 (264)
T cd06626 234 SPEGKDFLDRCLESDPKKRPTA-----SELLQHPFV 264 (264)
T ss_pred CHHHHHHHHHHccCCcccCCCH-----HHHhcCCCC
Confidence 8999999999999999999998 899999996
No 207
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-43 Score=351.65 Aligned_cols=254 Identities=31% Similarity=0.558 Sum_probs=224.7
Q ss_pred eeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 50 GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
.++||.|-||+||-|+++.||+.||||+++|......+ ...+.+|+.+|+.+.||+||.+-+.|+..+.+++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 57899999999999999999999999999987655543 47788999999999999999999999999999999999975
Q ss_pred CChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC---CCEEEeeccCccccCCccccccC
Q 011287 130 GELFDQITS--KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD---GHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 130 g~L~~~l~~--~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~---g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
|+++.|-. .|++++...++++.||+.||.|||.+||+|+||||||||+... -.+||||||+|+++.+..
T Consensus 648 -DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks----- 721 (888)
T KOG4236|consen 648 -DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS----- 721 (888)
T ss_pred -hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh-----
Confidence 77776643 4889999999999999999999999999999999999999765 369999999999876543
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCC----CCH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY----FSD 280 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~----~~~ 280 (489)
-..+.+||+.|+|||+|..+.|...-|+||+|||+|.-|.|..||... .++-..|.+..+.+|.. +++
T Consensus 722 ------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW~eis~ 793 (888)
T KOG4236|consen 722 ------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPWSEISP 793 (888)
T ss_pred ------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCchhhcCH
Confidence 345789999999999999999999999999999999999999999664 34556677777888753 899
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC-ccccc
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID-WKNIR 323 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~-~~~~~ 323 (489)
++.|||..+|+..-++|.+. ...+.|||+++.. |-+|+
T Consensus 794 ~AidlIn~LLqVkm~kRysv-----dk~lsh~Wlq~yq~w~DLR 832 (888)
T KOG4236|consen 794 EAIDLINNLLQVKMRKRYSV-----DKSLSHPWLQDYQTWLDLR 832 (888)
T ss_pred HHHHHHHHHHHHHHHHhcch-----HhhccchhhhcchHHHHHH
Confidence 99999999999999999988 7799999998754 66555
No 208
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=9e-42 Score=340.78 Aligned_cols=252 Identities=24% Similarity=0.385 Sum_probs=210.8
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEE--EEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcC
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVY--ALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDT 117 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~v--AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 117 (489)
.+..++|++.+.||+|+||.||+|.++.++..+ |+|.+... ........+.+|+.++.++ +||||+++++++.+.
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~ 80 (303)
T cd05088 3 VLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR 80 (303)
T ss_pred ccchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC
Confidence 456789999999999999999999998887654 66665432 2234455677899999999 899999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC
Q 011287 118 FSLYMALESCEGGELFDQITSKG----------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD 181 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~----------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~ 181 (489)
..+|+||||+++|+|.+++.+.+ .+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN 160 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC
Confidence 99999999999999999997543 47899999999999999999999999999999999999999
Q ss_pred CCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCH
Q 011287 182 GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSE 260 (489)
Q Consensus 182 g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~ 260 (489)
+.++|+|||++...... .......++..|+|||.+.+..++.++|||||||++|+|++ |.+||.+.+.
T Consensus 161 ~~~kl~dfg~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 229 (303)
T cd05088 161 YVAKIADFGLSRGQEVY-----------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC 229 (303)
T ss_pred CcEEeCccccCcccchh-----------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh
Confidence 99999999998632110 01111234567999999988889999999999999999998 9999998887
Q ss_pred HHHHHHHHhc-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 261 WLIFQRIIAR-DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 261 ~~~~~~i~~~-~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
.+.+..+... ....|..+++++.+||.+||+.+|++||++ .+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~il~ 275 (303)
T cd05088 230 AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSF-----AQILV 275 (303)
T ss_pred HHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence 7777666544 234566788999999999999999999999 55554
No 209
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=4.2e-41 Score=325.03 Aligned_cols=253 Identities=32% Similarity=0.587 Sum_probs=224.4
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||+|++|.||+|++..+++.||+|.+...... ......+.+|++++++++|||++++++++.+....|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 589999999999999999999999999999999876443 2345678889999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 126 SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
|+++++|.+++.+.+.+++..+..++.|++.||.+||++||+||||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~------ 153 (254)
T cd06627 80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS------ 153 (254)
T ss_pred cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc------
Confidence 99999999999988889999999999999999999999999999999999999999999999999998654322
Q ss_pred CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHH-hcCCCCCCCCCHHHHH
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRII-ARDIRFPNYFSDAARD 284 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~-~~~~~~p~~~~~~~~~ 284 (489)
.......++..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+. .....+|..++..+.+
T Consensus 154 ----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (254)
T cd06627 154 ----KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKD 229 (254)
T ss_pred ----ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHH
Confidence 11234568899999999988888999999999999999999999998877655554443 4445677889999999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
+|.+||..+|++||++ .+++.||||
T Consensus 230 ~i~~~l~~~p~~R~~~-----~~~l~~~~~ 254 (254)
T cd06627 230 FLMQCFQKDPNLRPTA-----KQLLKHPWI 254 (254)
T ss_pred HHHHHHhCChhhCcCH-----HHHhcCCCC
Confidence 9999999999999998 899999998
No 210
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=7.9e-42 Score=336.89 Aligned_cols=252 Identities=29% Similarity=0.455 Sum_probs=210.9
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||.|++|.||+|++..+|+.||||.+...... ......+.+|+.++++++||||+++++++.+....|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 589999999999999999999999999999998654322 2233467779999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 126 SCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 126 ~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|+. ++|..++... +.+++..+..++.|++.||+|||+.|++||||+|+||+++.++.++|+|||++..+....
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---- 154 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---- 154 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc----
Confidence 996 5898888653 568999999999999999999999999999999999999999999999999987553221
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCC-CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-----------
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSP-ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD----------- 271 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~----------- 271 (489)
.......++..|+|||++.+.. ++.++|+|||||++|+|++|+.||.+.++.....++....
T Consensus 155 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07860 155 ------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 228 (284)
T ss_pred ------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhh
Confidence 1122335788999999887644 6888999999999999999999998877765544433210
Q ss_pred -------CCC-----------CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 -------IRF-----------PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 -------~~~-----------p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
..+ ...++++++++|.+||+.||++||++ +++++||||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~~l~~~~f 284 (284)
T cd07860 229 TSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISA-----KAALAHPFF 284 (284)
T ss_pred hHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCH-----HHHhcCCCC
Confidence 011 13468899999999999999999998 899999998
No 211
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-41 Score=334.88 Aligned_cols=254 Identities=18% Similarity=0.334 Sum_probs=214.0
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEc----CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKI----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~----~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
+.+++|++.+.||+|+||.||+|.+. .++..||+|.+.... .......+.+|..+++.++||||+++++++...
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 79 (283)
T cd05090 2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE 79 (283)
T ss_pred CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC
Confidence 45689999999999999999999863 456889999986432 233445678899999999999999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC
Q 011287 118 FSLYMALESCEGGELFDQITSK-----------------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA 180 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~-----------------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~ 180 (489)
...|+||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~ 159 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE 159 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence 9999999999999999998532 23788899999999999999999999999999999999999
Q ss_pred CCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCC
Q 011287 181 DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259 (489)
Q Consensus 181 ~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~ 259 (489)
++.++|+|||+++....... ........++..|+|||.+.+..++.++|+|||||++|+|++ |.+||.+.+
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05090 160 QLHVKISDLGLSREIYSADY--------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS 231 (283)
T ss_pred CCcEEeccccccccccCCcc--------eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999999999986543211 111234456778999999988889999999999999999998 999998887
Q ss_pred HHHHHHHHHhcC-CCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 260 EWLIFQRIIARD-IRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 260 ~~~~~~~i~~~~-~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
...+.+.+.... +..|..+++.+.+++.+||+.||.+||++ .++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~-----~~i~~ 278 (283)
T cd05090 232 NQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRF-----KDIHT 278 (283)
T ss_pred HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCH-----HHHHH
Confidence 766666655433 45677889999999999999999999998 55654
No 212
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.7e-42 Score=334.61 Aligned_cols=253 Identities=29% Similarity=0.491 Sum_probs=219.5
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.++||||+++++.+.+...+|+|+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 478999999999999999999999999999999876532 234556778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 125 ESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 125 E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
||+.+++|.+++... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++.++.++|+|||.+.......
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~--- 155 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL--- 155 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH---
Confidence 999999999999876 789999999999999999999999 999999999999999999999999999987543211
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCC-----CHHHHHHHHHhc-CCCCCC
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDT-----SEWLIFQRIIAR-DIRFPN 276 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~-----~~~~~~~~i~~~-~~~~p~ 276 (489)
.....|+..|+|||.+.+..++.++|+|||||++|+|++|..||... ......+.+... ...+|.
T Consensus 156 ---------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (265)
T cd06605 156 ---------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPS 226 (265)
T ss_pred ---------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCCh
Confidence 11267889999999999999999999999999999999999999764 233444444443 233444
Q ss_pred C-CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 277 Y-FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 277 ~-~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
. ++.+++++|.+||..||++||++ .+++.||||+.
T Consensus 227 ~~~~~~~~~li~~~l~~~p~~Rpt~-----~~ll~~~~~~~ 262 (265)
T cd06605 227 GKFSPDFQDFVNLCLIKDPRERPSY-----KELLEHPFIKK 262 (265)
T ss_pred hhcCHHHHHHHHHHcCCCchhCcCH-----HHHhhCchhhc
Confidence 4 89999999999999999999998 89999999975
No 213
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.4e-42 Score=366.03 Aligned_cols=264 Identities=25% Similarity=0.367 Sum_probs=202.7
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCC-CcEEEEEE--------------eecccccchhHHHHHHHHHHHHHhCCCCCcc
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDT-GTVYALKI--------------MDKKFITKENKTAYVKLERIVLDQLDHPGVV 108 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~t-g~~vAiK~--------------~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv 108 (489)
.++|++++.||+|+||+||+|..+.. +..++.|. +.+...........+.+|+.+|+.++||||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 46899999999999999999986543 22223221 1111111223345678899999999999999
Q ss_pred EEEEEEEcCCEEEEEEeccCCCChHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCC
Q 011287 109 RLFFTFQDTFSLYMALESCEGGELFDQITSK-----GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH 183 (489)
Q Consensus 109 ~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~-----~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ 183 (489)
++++++.+....|+|++++. ++|.+++... .......++.++.||+.||.|||++||+||||||+|||++.+|.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 99999999999999999995 4788877543 23456788899999999999999999999999999999999999
Q ss_pred EEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCC-CCCC--CH
Q 011287 184 IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSP-FKDT--SE 260 (489)
Q Consensus 184 ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~P-F~~~--~~ 260 (489)
+||+|||+++.+.... ......++||..|+|||++.+..++.++|||||||++|+|++|..+ |... +.
T Consensus 306 vkL~DFGla~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~ 376 (501)
T PHA03210 306 IVLGDFGTAMPFEKER---------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP 376 (501)
T ss_pred EEEEeCCCceecCccc---------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH
Confidence 9999999998664321 1223356899999999999999999999999999999999998754 4322 22
Q ss_pred HHHHHHHHhc----CCCCC----------------------------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHH
Q 011287 261 WLIFQRIIAR----DIRFP----------------------------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVL 308 (489)
Q Consensus 261 ~~~~~~i~~~----~~~~p----------------------------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l 308 (489)
...+.++... ...+| ..++.++.++|.+||+.||.+|||+ .++
T Consensus 377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa-----~el 451 (501)
T PHA03210 377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGA-----AEL 451 (501)
T ss_pred HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCH-----HHH
Confidence 2222222210 11111 1256778899999999999999999 899
Q ss_pred hcCCCCCCCCcccc
Q 011287 309 KMHPFFKGIDWKNI 322 (489)
Q Consensus 309 ~~hpff~~i~~~~~ 322 (489)
+.||||.+...+.+
T Consensus 452 L~hp~f~~~~~~~~ 465 (501)
T PHA03210 452 LALPLFSAEEEEEI 465 (501)
T ss_pred hhChhhhcCCchHH
Confidence 99999988765543
No 214
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.1e-41 Score=337.77 Aligned_cols=255 Identities=28% Similarity=0.429 Sum_probs=214.4
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC--CEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT--FSL 120 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~l 120 (489)
..++|++.+.||.|+||.||+|++..+++.+|+|.+...... ......+.+|+.+++.++||||+++++++.+. ..+
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKI 81 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcE
Confidence 357899999999999999999999999999999999755333 22334456799999999999999999998877 889
Q ss_pred EEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 121 YMALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
|+||||+.+ +|.+++.... .+++..++.++.||+.||+|||+.|++||||||+||+++.++.++|+|||++..+....
T Consensus 82 ~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 82 YMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 999999975 9999887653 59999999999999999999999999999999999999999999999999988654321
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCC-CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--------
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSP-ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-------- 270 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-------- 270 (489)
.......+++.|+|||.+.+.. ++.++|+|||||++|+|++|.+||.+.+....+.++...
T Consensus 161 ----------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 230 (293)
T cd07843 161 ----------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKI 230 (293)
T ss_pred ----------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHH
Confidence 1122346788999999987654 688999999999999999999999988776655554321
Q ss_pred -----------------------CCCCCCC-CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 271 -----------------------DIRFPNY-FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 271 -----------------------~~~~p~~-~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
...+|.. +++.+.+||++||+.||++||++ .+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~-----~ell~~~~f 293 (293)
T cd07843 231 WPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISA-----EDALKHPYF 293 (293)
T ss_pred HHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCH-----HHHhcCCCC
Confidence 1123333 68889999999999999999998 899999998
No 215
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.6e-41 Score=336.99 Aligned_cols=258 Identities=28% Similarity=0.410 Sum_probs=208.2
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC-----
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF----- 118 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 118 (489)
+++|++.+.||+|+||.||+|++..+++.||||.+...... ........+|+.++++++||||+++++++.+..
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 57899999999999999999999999999999998654322 222334557999999999999999999886543
Q ss_pred ---EEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 119 ---SLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 119 ---~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
..|+||||+.+ +|.+.+.+. ..+++.+++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..
T Consensus 90 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 168 (310)
T cd07865 90 YKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARA 168 (310)
T ss_pred CCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence 45999999975 888887765 3699999999999999999999999999999999999999999999999999986
Q ss_pred cCCccccccCCCCCCCCccceecCCcCCChhhhcCCC-CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--
Q 011287 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP-ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD-- 271 (489)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~-- 271 (489)
+...... .........++..|+|||.+.+.. ++.++|+|||||++|+|++|++||.+.+.......+....
T Consensus 169 ~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T cd07865 169 FSLSKNS------KPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGS 242 (310)
T ss_pred ccCCccc------CCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 5432211 011223456889999999986644 7889999999999999999999998877654433322210
Q ss_pred -----------------CCCCC-------------CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 -----------------IRFPN-------------YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 -----------------~~~p~-------------~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
..+|. ..+..+.+||.+||..||.+||++ +++++||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~-----~e~l~h~~f 310 (310)
T cd07865 243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDA-----DTALNHDFF 310 (310)
T ss_pred CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCH-----HHHhcCCCC
Confidence 01111 125678899999999999999999 899999998
No 216
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.8e-41 Score=333.26 Aligned_cols=253 Identities=30% Similarity=0.484 Sum_probs=219.1
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|...+.||+|++|.||+|.+..+++.+|+|++... .......+.+|+.+++.++||||+++++++......|+|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 566678999999999999999999999999988543 22334557789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 126 SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
|+.+++|.+++.. +.+++..+..++.|++.||+|||++||+||||+|+||+++.++.++|+|||.+......
T Consensus 97 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~------- 168 (285)
T cd06648 97 FLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE------- 168 (285)
T ss_pred ccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC-------
Confidence 9999999999887 67999999999999999999999999999999999999999999999999987654321
Q ss_pred CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC---CCCCCCHHH
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR---FPNYFSDAA 282 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~---~p~~~~~~~ 282 (489)
........|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+.......+...... .+..++..+
T Consensus 169 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 245 (285)
T cd06648 169 ---VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRL 245 (285)
T ss_pred ---CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHH
Confidence 11223456899999999999888999999999999999999999999988877777666654322 233478999
Q ss_pred HHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 283 RDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 283 ~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.+||++||+.||++||++ .++++||||+..
T Consensus 246 ~~li~~~l~~~p~~Rpt~-----~~il~~~~~~~~ 275 (285)
T cd06648 246 RSFLDRMLVRDPAQRATA-----AELLNHPFLAKA 275 (285)
T ss_pred HHHHHHHcccChhhCcCH-----HHHccCcccccC
Confidence 999999999999999998 899999999853
No 217
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.2e-41 Score=328.82 Aligned_cols=248 Identities=25% Similarity=0.403 Sum_probs=212.1
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
.+++|++.+.||+|+||.||+|+.+. +..+|+|.+..... ....+.+|+.++++++||||+++++++.+...+|+
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEE
Confidence 45789999999999999999998854 56899998865422 23456779999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 123 ALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
||||+++|+|.+++... +.+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.++.......
T Consensus 77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY- 155 (256)
T ss_pred EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce-
Confidence 99999999999998753 5689999999999999999999999999999999999999999999999999875432211
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC-CCCCCCCC
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD-IRFPNYFS 279 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~-~~~p~~~~ 279 (489)
.......++..|+|||++.+..++.++|+|||||++|+|++ |++||...+.......+.... ...|...+
T Consensus 156 --------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~ 227 (256)
T cd05114 156 --------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLAS 227 (256)
T ss_pred --------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Confidence 01112235568999999998889999999999999999999 999999998888888877653 34567788
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHh
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLK 309 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~ 309 (489)
.++.+|+.+||+.||++||++ ++++
T Consensus 228 ~~~~~li~~c~~~~p~~Rps~-----~~l~ 252 (256)
T cd05114 228 MTVYEVMYSCWHEKPEGRPTF-----AELL 252 (256)
T ss_pred HHHHHHHHHHccCCcccCcCH-----HHHH
Confidence 999999999999999999998 5665
No 218
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.1e-41 Score=344.92 Aligned_cols=260 Identities=26% Similarity=0.417 Sum_probs=214.5
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEE----cCCEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQ----DTFSL 120 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~~~~l 120 (489)
++|++.+.||+|+||.||+|+++.+|+.||+|++.+..... .....+.+|+.+++.++||||++++++|. +...+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP-TLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc-cchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 68999999999999999999999999999999987653322 23455667999999999999999998886 34578
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.+|.++|+|||++........
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 99999996 59999998878899999999999999999999999999999999999999999999999999876543221
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc---------
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR--------- 270 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~--------- 270 (489)
. ........+|+..|+|||++.+ ..++.++|+|||||++|+|++|++||.+.+.......+...
T Consensus 163 ~------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 163 E------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL 236 (334)
T ss_pred C------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence 1 1112234578999999999865 45889999999999999999999999887654433332210
Q ss_pred -----------------CCCC-----CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 271 -----------------DIRF-----PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 271 -----------------~~~~-----p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.... ....+.++.++|.+||+.||++||++ ++++.||||.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~~l~~~~~~~~ 300 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITV-----EQALQHPFLAQY 300 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCH-----HHHHhChhhhhc
Confidence 0011 13468999999999999999999998 899999999854
No 219
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=6e-42 Score=340.37 Aligned_cols=253 Identities=30% Similarity=0.492 Sum_probs=218.0
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
+.|.....||+|+||.||++.+..++..||||.+... .......+.+|+.+++.++||||+++++.+......|+||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 4566678899999999999999999999999998653 2334556778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++++|.+++.. +.+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 99 e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------ 171 (292)
T cd06658 99 EFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE------ 171 (292)
T ss_pred eCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc------
Confidence 99999999998754 57999999999999999999999999999999999999999999999999998754321
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc---CCCCCCCCCHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR---DIRFPNYFSDA 281 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~---~~~~p~~~~~~ 281 (489)
........|+..|+|||++.+..++.++|+|||||++|+|++|..||...+....+..+... ....+...+..
T Consensus 172 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (292)
T cd06658 172 ----VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSV 247 (292)
T ss_pred ----cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHH
Confidence 11223467899999999999888999999999999999999999999988776665554432 22223357889
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 282 ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 282 ~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
+.++|.+||+.||++||++ +++++||||..
T Consensus 248 ~~~li~~~l~~~P~~Rpt~-----~~il~~~~~~~ 277 (292)
T cd06658 248 LRGFLDLMLVREPSQRATA-----QELLQHPFLKL 277 (292)
T ss_pred HHHHHHHHccCChhHCcCH-----HHHhhChhhhc
Confidence 9999999999999999998 89999999985
No 220
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.4e-41 Score=332.84 Aligned_cols=253 Identities=30% Similarity=0.481 Sum_probs=220.5
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
-|++.+.||+|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||+++++.+.+....|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 47889999999999999999999999999999865422 2334567789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 126 SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
|+++++|.+++.. +.+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++..+....
T Consensus 83 ~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~------ 155 (277)
T cd06641 83 YLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ------ 155 (277)
T ss_pred eCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch------
Confidence 9999999998875 579999999999999999999999999999999999999999999999999987653321
Q ss_pred CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-CCCCCCCCCHHHHH
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-DIRFPNYFSDAARD 284 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~ 284 (489)
.......|+..|+|||.+.+...+.++|+|||||++|+|++|..||...+.......+... ...++..++.++.+
T Consensus 156 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (277)
T cd06641 156 ----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKE 231 (277)
T ss_pred ----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHH
Confidence 1123456889999999998888899999999999999999999999888776666665443 23456678999999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
+|.+||+.+|.+||++ .++++||||..
T Consensus 232 ~i~~~l~~~p~~Rp~~-----~~~l~~~~~~~ 258 (277)
T cd06641 232 FVEACLNKEPSFRPTA-----KELLKHKFIVR 258 (277)
T ss_pred HHHHHccCChhhCcCH-----HHHHhCHHHhh
Confidence 9999999999999988 89999999975
No 221
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-42 Score=354.43 Aligned_cols=249 Identities=31% Similarity=0.556 Sum_probs=218.2
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGG 130 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg 130 (489)
-+||+|.||+||.|++..|....|||.+..+ .....+-+..|+.+.+.|+|.|||++++.+..++++-+.||.++||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 3799999999999999999999999988644 2334556778999999999999999999999999999999999999
Q ss_pred ChHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC-CCCEEEeeccCccccCCccccccCCC
Q 011287 131 ELFDQITSK-GHL--SEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA-DGHIKIADFGSVKPMQDSRITVLPNA 206 (489)
Q Consensus 131 ~L~~~l~~~-~~l--~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~-~g~ikL~DFG~a~~~~~~~~~~~~~~ 206 (489)
+|.+++... |++ +|.++-+|..||++||.|||++.|||||||-.|+||+. .|.+||+|||.++.+..-
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-------- 729 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-------- 729 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC--------
Confidence 999999764 888 89999999999999999999999999999999999975 589999999999976432
Q ss_pred CCCCCccceecCCcCCChhhhcCCC--CCCCCcchhhhHHHHHHhhCCCCCCCCCH--HHHHHH-HHhcCCCCCCCCCHH
Q 011287 207 ASDDKACTFVGTAAYVPPEVLNSSP--ATFGNDLWALGCTLYQMLSGTSPFKDTSE--WLIFQR-IIARDIRFPNYFSDA 281 (489)
Q Consensus 207 ~~~~~~~~~~gt~~Y~aPE~l~~~~--~~~~sDiwSLG~ilyelltG~~PF~~~~~--~~~~~~-i~~~~~~~p~~~~~~ 281 (489)
..-..+|.||..|||||++..++ |+.++|||||||++.||.||++||..... ..+|+- ..+..+++|..++.+
T Consensus 730 --nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsae 807 (1226)
T KOG4279|consen 730 --NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAE 807 (1226)
T ss_pred --CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHH
Confidence 23455899999999999997654 89999999999999999999999975433 334443 345567889999999
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 282 ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 282 ~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
++.+|.+|+.+||..||+| .+++..||++.-
T Consensus 808 ak~FilrcFepd~~~R~sA-----~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 808 AKNFILRCFEPDPCDRPSA-----KDLLQDPFLQHN 838 (1226)
T ss_pred HHHHHHHHcCCCcccCccH-----HHhccCcccccC
Confidence 9999999999999999999 889999999753
No 222
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.7e-41 Score=332.25 Aligned_cols=248 Identities=31% Similarity=0.510 Sum_probs=206.4
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcC--CEEEEE
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDT--FSLYMA 123 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~--~~lylV 123 (489)
|++.+.||+|+||.||+|.+..+++.||+|.+.+...... .....+|..+++++. ||||+++++++.+. ..+|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE--QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch--hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 7889999999999999999999999999999876532222 223346888888885 99999999999987 889999
Q ss_pred EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|||+.+ +|.+.+... +.+++..+..++.||+.||+|||+.|++||||+|+||+++. +.++|+|||++..+....
T Consensus 79 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~--- 153 (282)
T cd07831 79 FELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP--- 153 (282)
T ss_pred EecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC---
Confidence 999975 888888753 57899999999999999999999999999999999999999 999999999997653221
Q ss_pred cCCCCCCCCccceecCCcCCChhhhc-CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-----------
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLN-SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR----------- 270 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~-~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~----------- 270 (489)
......++..|+|||.+. +..++.++|+|||||++|+|++|.+||.+.+..+.+..+...
T Consensus 154 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (282)
T cd07831 154 --------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKK 225 (282)
T ss_pred --------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHh
Confidence 112346789999999764 455788999999999999999999999988876655544321
Q ss_pred -------CCCCC-----------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 271 -------DIRFP-----------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 271 -------~~~~p-----------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.+.+| ..++.++.+||.+||+.||++||++ .++++||||
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~-----~~~l~~~~~ 282 (282)
T cd07831 226 FRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITA-----KQALRHPYF 282 (282)
T ss_pred hcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCH-----HHHhhCCCC
Confidence 11222 2468999999999999999999998 899999998
No 223
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3.8e-41 Score=333.57 Aligned_cols=253 Identities=28% Similarity=0.414 Sum_probs=205.5
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
..+|.+.+.||+|+||.||+|.+..+|+.||+|++..... ......+.+|+.+++.++|+||+++++++.+....|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 3789999999999999999999999999999999865432 22223456799999999999999999999999999999
Q ss_pred EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|||+. ++|.+.+.. .+.+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||+++......
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--- 157 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS--- 157 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC---
Confidence 99996 577776654 3568899999999999999999999999999999999999999999999999987543211
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHH-HHHHHHHhc----------
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEW-LIFQRIIAR---------- 270 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~-~~~~~i~~~---------- 270 (489)
.......+++.|+|||++.+. .++.++|+|||||++|+|++|..||.+.+.. +.+..+...
T Consensus 158 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 158 -------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred -------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhh
Confidence 112344678999999998764 4788999999999999999999999865532 222222110
Q ss_pred ----CCC-----C----C---------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 271 ----DIR-----F----P---------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 271 ----~~~-----~----p---------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
... + + ...+.++.+++.+||+.||++|||+ .+++.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~-----~~~l~h~~~ 291 (291)
T cd07870 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISA-----QDALLHPYF 291 (291)
T ss_pred hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCH-----HHHhcCCCC
Confidence 000 0 0 0125789999999999999999999 899999998
No 224
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.4e-41 Score=334.27 Aligned_cols=248 Identities=20% Similarity=0.323 Sum_probs=212.5
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcC-----CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKID-----TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~-----tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
..++|.+.+.||+|+||.||+|++.. ++..||+|++.... .......+.+|+.+++.++||||+++++++.+.
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 45789999999999999999998753 46899999986542 222346778899999999999999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCC
Q 011287 118 FSLYMALESCEGGELFDQITSKG--------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH 183 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~--------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ 183 (489)
...|+||||+++++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+||+++.++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence 99999999999999999997643 3789999999999999999999999999999999999999999
Q ss_pred EEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHH
Q 011287 184 IKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWL 262 (489)
Q Consensus 184 ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~ 262 (489)
++|+|||++........ ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+...
T Consensus 161 ~kl~d~g~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~ 232 (280)
T cd05049 161 VKIGDFGMSRDVYTTDY--------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE 232 (280)
T ss_pred EEECCcccceecccCcc--------eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 99999999875432210 011123356788999999999999999999999999999998 999999888887
Q ss_pred HHHHHHhcCC-CCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 263 IFQRIIARDI-RFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 263 ~~~~i~~~~~-~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
....+..+.. ..|..++..+.+|+++||+.||++||++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 271 (280)
T cd05049 233 VIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINI 271 (280)
T ss_pred HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence 7777776554 3456789999999999999999999998
No 225
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=3.9e-41 Score=333.78 Aligned_cols=254 Identities=27% Similarity=0.396 Sum_probs=209.6
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCCE----
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTFS---- 119 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~---- 119 (489)
++|++.+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.+. ||||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 479999999999999999999999999999999865432 2223345677999999995 6999999999987665
Q ss_pred -EEEEEeccCCCChHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC-CCCEEEeeccCc
Q 011287 120 -LYMALESCEGGELFDQITSK-----GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA-DGHIKIADFGSV 192 (489)
Q Consensus 120 -lylV~E~~~gg~L~~~l~~~-----~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~-~g~ikL~DFG~a 192 (489)
.|+||||+++ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.++|+|||.+
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999986 898887653 35899999999999999999999999999999999999998 889999999998
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~ 271 (489)
..+.... .......+++.|+|||++.+ ..++.++|+|||||++|+|++|.+||.+.++.....++....
T Consensus 159 ~~~~~~~----------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~ 228 (295)
T cd07837 159 RAFSIPV----------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLL 228 (295)
T ss_pred eecCCCc----------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 7553221 11122357889999998865 457899999999999999999999999887766655543310
Q ss_pred -----C------------CCC-----------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 272 -----I------------RFP-----------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 272 -----~------------~~p-----------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
. .+| +.++.++.+||.+||+.||.+||++ .+++.||||+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~-----~eil~~~~~~ 295 (295)
T cd07837 229 GTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISA-----KAALTHPYFD 295 (295)
T ss_pred CCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCH-----HHHhcCCCcC
Confidence 0 011 2478899999999999999999998 8999999995
No 226
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.3e-41 Score=335.65 Aligned_cols=258 Identities=26% Similarity=0.373 Sum_probs=213.0
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
+++|++.+.||+|++|.||+|.+..+|+.||+|.+...... ......+.+|+.+++.++||||+++++++.+....|+|
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 47899999999999999999999999999999998654322 23335567799999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC-CCCEEEeeccCccccCCccc
Q 011287 124 LESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA-DGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~--l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~-~g~ikL~DFG~a~~~~~~~~ 200 (489)
|||+. ++|.+++..... +++..++.++.||+.||+|||++|++||||+|+||+++. ++.+||+|||++.......
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~- 157 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV- 157 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc-
Confidence 99996 488888866433 588899999999999999999999999999999999985 4579999999987543211
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--------
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD-------- 271 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~-------- 271 (489)
.......+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||...+......++....
T Consensus 158 ---------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (294)
T PLN00009 158 ---------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW 228 (294)
T ss_pred ---------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence 11123467899999999866 457889999999999999999999999877766555443210
Q ss_pred -------------CC--------CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 272 -------------IR--------FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 272 -------------~~--------~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
.. ....+++++.++|.+||+.||++||++ .+++.||||.+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~-----~~~l~~~~~~~~~ 291 (294)
T PLN00009 229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITA-----RAALEHEYFKDLG 291 (294)
T ss_pred cccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCH-----HHHhcCchHhHHh
Confidence 00 123468899999999999999999998 8999999998654
No 227
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.1e-41 Score=327.96 Aligned_cols=253 Identities=29% Similarity=0.504 Sum_probs=211.4
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.+.+.....||+|+||.||+|++..++..||+|.+.... ......+.+|+.+++.++|+||+++++++.+....|+|
T Consensus 7 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 7 YDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred cccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 344555578999999999999999999999999886542 23445678899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC-CCCEEEeeccCccccCCcc
Q 011287 124 LESCEGGELFDQITSK-GHL--SEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA-DGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-~~l--~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~-~g~ikL~DFG~a~~~~~~~ 199 (489)
+||+++++|.+++... +.+ ++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~ 163 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN 163 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC
Confidence 9999999999999864 456 88999999999999999999999999999999999986 6799999999987553211
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCC--CCCCCcchhhhHHHHHHhhCCCCCCCCCHH--HHHHH-HHhcCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSP--ATFGNDLWALGCTLYQMLSGTSPFKDTSEW--LIFQR-IIARDIRF 274 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~--~~~~sDiwSLG~ilyelltG~~PF~~~~~~--~~~~~-i~~~~~~~ 274 (489)
.......|+..|+|||.+.... ++.++|+|||||++|+|++|++||...... ..+.. .......+
T Consensus 164 ----------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 233 (268)
T cd06624 164 ----------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEI 233 (268)
T ss_pred ----------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCC
Confidence 1122346889999999986543 788999999999999999999999764322 12221 22344567
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 275 PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 275 p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
|..+++++++|+.+||+.+|.+||++ .+++.||||
T Consensus 234 ~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~ll~~~~~ 268 (268)
T cd06624 234 PESLSAEAKNFILRCFEPDPDKRASA-----HDLLQDPFL 268 (268)
T ss_pred CcccCHHHHHHHHHHcCCCchhCCCH-----HHHHhCCCC
Confidence 88899999999999999999999998 899999997
No 228
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.4e-41 Score=326.78 Aligned_cols=253 Identities=31% Similarity=0.570 Sum_probs=218.9
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|.+.+.||+|+||.||+|.+..+|..||+|.+....... .....+.+|+.+++.++|+||+++++.+.+....|+|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 5899999999999999999999999999999987653322 234556789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCC-EEEeeccCccccCCccccc
Q 011287 126 SCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-IKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~-ikL~DFG~a~~~~~~~~~~ 202 (489)
|+++++|.+++.+.. .+++..+..++.|++.||.|||++|++|+||||+||++++++. ++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--- 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc---
Confidence 999999999987653 4799999999999999999999999999999999999998865 6999999987654321
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCHH
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-RFPNYFSDA 281 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~~p~~~~~~ 281 (489)
.......|+..|+|||++.+..++.++|+|||||++|+|++|..||...+.......+..... .++..++.+
T Consensus 157 -------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (257)
T cd08225 157 -------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRD 229 (257)
T ss_pred -------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHH
Confidence 112234688999999999888899999999999999999999999998877666665554433 345678899
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 282 ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 282 ~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
+.++|.+||+.+|++||++ .++++||||
T Consensus 230 ~~~~i~~~l~~~p~~Rpt~-----~~ll~~~~~ 257 (257)
T cd08225 230 LRSLISQLFKVSPRDRPSI-----TSILKRPFL 257 (257)
T ss_pred HHHHHHHHhccChhhCcCH-----HHHhhCCCC
Confidence 9999999999999999998 899999997
No 229
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.2e-41 Score=328.52 Aligned_cols=252 Identities=29% Similarity=0.483 Sum_probs=212.1
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.++|++.+.||+|+||.||+|++..+++.||||.+.............+.+|+.+++.++||||+++++++.+....|+|
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 36899999999999999999999999999999988765444455556677899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 124 LESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
|||+++|+|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..+....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 999999999988753 3458999999999999999999999999999999999999999999999999987654321
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC--HHHHHHHHHhcCC-CC-C
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS--EWLIFQRIIARDI-RF-P 275 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~--~~~~~~~i~~~~~-~~-p 275 (489)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||.... .....+.+..... .. +
T Consensus 161 ----------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T cd08228 161 ----------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPT 230 (267)
T ss_pred ----------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCCh
Confidence 11224468899999999998889999999999999999999999996543 2344444443222 12 2
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
..++..+.++|.+||+.+|++||++ .++++
T Consensus 231 ~~~~~~~~~li~~cl~~~p~~Rp~~-----~~vl~ 260 (267)
T cd08228 231 EHYSEKLRELVSMCIYPDPDQRPDI-----GYVHQ 260 (267)
T ss_pred hhcCHHHHHHHHHHCCCCcccCcCH-----HHHHH
Confidence 3577899999999999999999998 66653
No 230
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.7e-41 Score=338.01 Aligned_cols=254 Identities=29% Similarity=0.486 Sum_probs=218.5
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
.-|.....||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++++.+......|+||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence 45666778999999999999999999999999986542 223455778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++++|..++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..+....
T Consensus 98 e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~----- 171 (297)
T cd06659 98 EFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV----- 171 (297)
T ss_pred ecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-----
Confidence 99999999987765 569999999999999999999999999999999999999999999999999987543211
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC---CCCCCCCHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI---RFPNYFSDA 281 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~---~~p~~~~~~ 281 (489)
......+|+..|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+..... ..+..++..
T Consensus 172 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (297)
T cd06659 172 -----PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPV 246 (297)
T ss_pred -----ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHH
Confidence 122346789999999999988899999999999999999999999998877766665544322 234467899
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 282 ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 282 ~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
+.++|++||+.+|.+||++ .++++||||...
T Consensus 247 l~~~i~~~l~~~P~~Rps~-----~~ll~~~~~~~~ 277 (297)
T cd06659 247 LRDFLERMLTREPQERATA-----QELLDHPFLLQT 277 (297)
T ss_pred HHHHHHHHhcCCcccCcCH-----HHHhhChhhccC
Confidence 9999999999999999998 899999999753
No 231
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.7e-41 Score=341.71 Aligned_cols=253 Identities=28% Similarity=0.446 Sum_probs=213.0
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC-----
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF----- 118 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 118 (489)
.++|++++.||+|+||.||+|.+..+|..||+|++.+... .......+.+|+.+++.++||||++++++|....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4689999999999999999999999999999999865422 2333445778999999999999999999997653
Q ss_pred -EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 119 -SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 119 -~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
..|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++.....
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 170 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDS 170 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccccc
Confidence 458999999 6789888764 5799999999999999999999999999999999999999999999999999875432
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC---
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR--- 273 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~--- 273 (489)
......+++.|+|||.+.+ ..++.++|+|||||++|+|++|++||.+.+....+..+......
T Consensus 171 -------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 171 -------------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred -------------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 1123467899999999876 45788999999999999999999999988766555554432111
Q ss_pred ----------------------------CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 274 ----------------------------FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 274 ----------------------------~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
+...+++++.++|.+||+.||++||++ .+++.||||+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~-----~~~l~~~~~~~~ 304 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITA-----AEALAHPYFEEF 304 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCH-----HHHhcCccHhhh
Confidence 123578889999999999999999999 889999999865
No 232
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.7e-41 Score=331.91 Aligned_cols=251 Identities=26% Similarity=0.425 Sum_probs=211.2
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||.|++|.||+|++..+|..||||++..... ......+.+|+.+++.++||||+++++.+.+....|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 69999999999999999999999999999999876532 2233456679999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 126 SCEGGELFDQITSK---GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 126 ~~~gg~L~~~l~~~---~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|+.+ +|.+++... ..+++..+..++.||+.||.|||+.|++||||||+||+++.++.++|+|||++.......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--- 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV--- 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc---
Confidence 9985 898888754 358999999999999999999999999999999999999999999999999987543211
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC----------
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD---------- 271 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~---------- 271 (489)
......+++..|+|||++.+. .++.++|+|||||++|+|++|++||.+.+..+.+.++....
T Consensus 155 -------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07836 155 -------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPG 227 (284)
T ss_pred -------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHH
Confidence 112234678899999998664 47889999999999999999999999887666555543210
Q ss_pred --------CC-----------CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 --------IR-----------FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 --------~~-----------~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.. +.+..+..++++|.+||+.||.+||++ .++++||||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~-----~~~l~~~~f 284 (284)
T cd07836 228 ISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISA-----HDALQHPWF 284 (284)
T ss_pred HhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCH-----HHHhcCCCC
Confidence 00 112457889999999999999999998 899999998
No 233
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-43 Score=352.65 Aligned_cols=251 Identities=29% Similarity=0.401 Sum_probs=224.6
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
-|.-++.||.|+||.||.|++..|...||||.|....-....+-..+..|+..|+.++|||+|.+-+.|-.+...|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 48889999999999999999999999999999987766666677778889999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 126 SCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 126 ~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||-| +-.+++.-. .++.+.++..|+.+.+.||.|||+++.||||||..|||+++.|.|||+|||+|..+
T Consensus 107 YClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~--------- 176 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM--------- 176 (948)
T ss_pred HHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc---------
Confidence 9965 766666543 57999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCccceecCCcCCChhhhc---CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-CCCC-CCCC
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLN---SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD-IRFP-NYFS 279 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~-~~~p-~~~~ 279 (489)
...++|+|||.|||||++. .+.|+-++||||||++..+|.-.+||+...|....+..|-.++ +.++ +.++
T Consensus 177 -----~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS 251 (948)
T KOG0577|consen 177 -----APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWS 251 (948)
T ss_pred -----CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhH
Confidence 3456999999999999984 5679999999999999999999999999998887777776654 3444 4589
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
..++.||+.||++-|.+|||+ ++++.|+|...
T Consensus 252 ~~F~~Fvd~CLqKipqeRpts-----e~ll~H~fv~R 283 (948)
T KOG0577|consen 252 DYFRNFVDSCLQKIPQERPTS-----EELLKHRFVLR 283 (948)
T ss_pred HHHHHHHHHHHhhCcccCCcH-----HHHhhcchhcc
Confidence 999999999999999999999 89999999864
No 234
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.3e-41 Score=340.75 Aligned_cols=258 Identities=25% Similarity=0.416 Sum_probs=209.1
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC-----C
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT-----F 118 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 118 (489)
.++|++.+.||+|+||.||+|++..+|+.||+|++... ........+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 36899999999999999999999999999999998542 1223345566799999999999999999887644 3
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.+|+|+||+.+ +|.+++.. +.+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......
T Consensus 82 ~~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 82 DVYIVQELMET-DLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred eEEEEehhccc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 58999999975 88887754 57999999999999999999999999999999999999999999999999998765332
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh--------
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA-------- 269 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~-------- 269 (489)
.. ........+||..|+|||.+.+ ..++.++|||||||++|+|++|++||.+.+.......+..
T Consensus 160 ~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 160 HD-------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred cc-------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 11 0112234578999999998754 5688999999999999999999999987665433322211
Q ss_pred -------c-----------CCC-----CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 270 -------R-----------DIR-----FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 270 -------~-----------~~~-----~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
. ... ..+..++++.+||.+||+.||++||++ .++++||||+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~-----~e~l~hp~~~~~ 298 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITV-----EEALAHPYLEQY 298 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCH-----HHHhcCcccccc
Confidence 0 000 112457889999999999999999998 899999999854
No 235
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5e-41 Score=329.72 Aligned_cols=253 Identities=21% Similarity=0.329 Sum_probs=214.5
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCC-----CcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDT-----GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD 116 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~t-----g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 116 (489)
+..++|++.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVST 80 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence 4568999999999999999999998644 4899999986542 22233456789999999999999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEE
Q 011287 117 TFSLYMALESCEGGELFDQITSK----------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~----------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL 186 (489)
....|+||||+++|+|.+++... +.+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|
T Consensus 81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEE
Confidence 99999999999999999998653 23678899999999999999999999999999999999999999999
Q ss_pred eeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHH
Q 011287 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQ 265 (489)
Q Consensus 187 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~ 265 (489)
+|||+++.+..... ........++..|+|||.+.+..++.++|+|||||++|+|++ |.+||.+.+.....+
T Consensus 161 ~dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 232 (277)
T cd05032 161 GDFGMTRDIYETDY--------YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK 232 (277)
T ss_pred CCcccchhhccCcc--------cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH
Confidence 99999876543221 011223456789999999988889999999999999999998 999999888877776
Q ss_pred HHHhc-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHh
Q 011287 266 RIIAR-DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLK 309 (489)
Q Consensus 266 ~i~~~-~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~ 309 (489)
.+... ...+|..++.++.+||.+||+.+|++|||+ .+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~l~ 272 (277)
T cd05032 233 FVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTF-----LEIV 272 (277)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCH-----HHHH
Confidence 66644 345788889999999999999999999998 5565
No 236
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=356.74 Aligned_cols=244 Identities=35% Similarity=0.557 Sum_probs=213.4
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ly 121 (489)
..++|++...+|.|+||.|-.+.+..+++.+++|++.+.. ....+|..++... +||||+++++++.+...+|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 4688999999999999999999999999999999997761 1233355444444 7999999999999999999
Q ss_pred EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeee-CCCCCEEEeeccCccccCCccc
Q 011287 122 MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLL-TADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl-~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
+|||.+.|+.|.+.+.....+. .++..|+++|+.|+.|||++|||||||||+|||+ +..|+++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-- 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-- 469 (612)
T ss_pred eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence 9999999999999998876666 8888999999999999999999999999999999 68999999999999865432
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHH-HHHHHHHhcCCCCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEW-LIFQRIIARDIRFPNYFS 279 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~-~~~~~i~~~~~~~p~~~~ 279 (489)
..+-+-|..|+|||++....|+.++||||||++||+||+|+.||...... ++..+|....+ ...+|
T Consensus 470 -----------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~--s~~vS 536 (612)
T KOG0603|consen 470 -----------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKF--SECVS 536 (612)
T ss_pred -----------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCcc--ccccC
Confidence 22446789999999999999999999999999999999999999876554 66666655433 38899
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.++++||++||+.||.+||++ .+++.||||
T Consensus 537 ~~AKdLl~~LL~~dP~~Rl~~-----~~i~~h~w~ 566 (612)
T KOG0603|consen 537 DEAKDLLQQLLQVDPALRLGA-----DEIGAHPWF 566 (612)
T ss_pred HHHHHHHHHhccCChhhCcCh-----hhhccCcch
Confidence 999999999999999999999 789999999
No 237
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1e-40 Score=322.14 Aligned_cols=255 Identities=32% Similarity=0.564 Sum_probs=222.4
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC--CEEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT--FSLYMA 123 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~lylV 123 (489)
+|.+.+.||+|++|.||+|.+..+++.|++|++...... ......+.+|+.++++++||||+++++.+.+. ..+|+|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 588999999999999999999999999999999765432 34566788899999999999999999999988 899999
Q ss_pred EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
+||+++++|.+++.+...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 157 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG-- 157 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc--
Confidence 999999999999998888999999999999999999999999999999999999999999999999998866443210
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC-HHHHHHHHH--hcCCCCCCCCCH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS-EWLIFQRII--ARDIRFPNYFSD 280 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~-~~~~~~~i~--~~~~~~p~~~~~ 280 (489)
.......++..|+|||.+.+...+.++|+|||||++|+|++|..||.... .......+. .....+|..++.
T Consensus 158 ------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (260)
T cd06606 158 ------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSE 231 (260)
T ss_pred ------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCH
Confidence 01234578899999999998889999999999999999999999998776 333333333 244567788899
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.+.++|.+||+.||++||++ .+++.||||
T Consensus 232 ~l~~~i~~~l~~~p~~Rp~~-----~~ll~~~~~ 260 (260)
T cd06606 232 EAKDFLRKCLRRDPKKRPTA-----DELLQHPFL 260 (260)
T ss_pred HHHHHHHHhCcCChhhCCCH-----HHHhhCCCC
Confidence 99999999999999999998 899999997
No 238
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=9.9e-41 Score=322.55 Aligned_cols=253 Identities=31% Similarity=0.603 Sum_probs=223.9
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|.+.+.||.|+||.||+|.+..++..||+|++...... ......+..|+.+++.++|||++++++.+.+....++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 689999999999999999999999999999999765433 2344557789999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 126 SCEGGELFDQITSK----GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 126 ~~~gg~L~~~l~~~----~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
|+++++|.+++.+. ..+++..+..++.+++.||.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 157 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-- 157 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--
Confidence 99999999999764 679999999999999999999999999999999999999999999999999987654321
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-CCCCCCCCH
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD-IRFPNYFSD 280 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~-~~~p~~~~~ 280 (489)
.......|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+.......+.... ..+|..++.
T Consensus 158 --------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (258)
T cd08215 158 --------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSS 229 (258)
T ss_pred --------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCH
Confidence 12234578999999999999889999999999999999999999998888777776665543 346668899
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.+.+++.+||..+|++||++ .++++||||
T Consensus 230 ~~~~~i~~~l~~~p~~Rp~~-----~~ll~~~~~ 258 (258)
T cd08215 230 ELRNLVSSLLQKDPEERPSI-----AQILQSPFI 258 (258)
T ss_pred HHHHHHHHHcCCChhhCcCH-----HHHhcCCCC
Confidence 99999999999999999999 899999997
No 239
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.1e-41 Score=369.03 Aligned_cols=258 Identities=26% Similarity=0.344 Sum_probs=209.7
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
+++|++++.||+|+||.||+|++..+|+.||+|++.............+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 47899999999999999999999999999999999765444444556678899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCc
Q 011287 124 LESCEGGELFDQITSK-----------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-----------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a 192 (489)
|||++||+|.+++... ..++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999988642 23556778889999999999999999999999999999999999999999999
Q ss_pred cccCCccccccCC--------CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHH
Q 011287 193 KPMQDSRITVLPN--------AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIF 264 (489)
Q Consensus 193 ~~~~~~~~~~~~~--------~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~ 264 (489)
+............ ..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 8763211000000 00011223468999999999999999999999999999999999999999876554332
Q ss_pred HHH-HhcCCCC--CCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 265 QRI-IARDIRF--PNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 265 ~~i-~~~~~~~--p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
... ....... ...+++.+.+++.+||+.||++|+++.
T Consensus 241 ~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~ 280 (932)
T PRK13184 241 YRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSV 280 (932)
T ss_pred hhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHH
Confidence 221 1111111 135789999999999999999999873
No 240
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=3.3e-41 Score=341.83 Aligned_cols=257 Identities=28% Similarity=0.427 Sum_probs=213.0
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC-----C
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT-----F 118 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-----~ 118 (489)
..+|.+.+.||+|+||.||+|++..+++.||||.+......... ...+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~-~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRID-AKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccch-hHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 35799999999999999999999999999999998764333322 34456799999999999999999888654 3
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.+|+|+||+. ++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.....
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 5899999996 689999988888999999999999999999999999999999999999999999999999998765322
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-------
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR------- 270 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~------- 270 (489)
. .......++..|+|||.+.. ..++.++|+|||||++|+|++|++||.+.+.......+...
T Consensus 162 ~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 231 (337)
T cd07858 162 G----------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEE 231 (337)
T ss_pred c----------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChH
Confidence 1 12234578899999998865 46889999999999999999999999876543333222110
Q ss_pred ---------------------CC---CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 271 ---------------------DI---RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 271 ---------------------~~---~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.. ...+.+++++.+||++||+.||++||++ +++++||||..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~-----~ell~h~~~~~~ 297 (337)
T cd07858 232 DLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITV-----EEALAHPYLASL 297 (337)
T ss_pred HhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCH-----HHHHcCcchhhh
Confidence 00 0123578999999999999999999998 899999999865
No 241
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=6e-41 Score=335.22 Aligned_cols=252 Identities=30% Similarity=0.410 Sum_probs=215.6
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
..|++.+.||+|+||.||+|++..+|+.||+|++.............+.+|+.+++.++||||+++++++.+....|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 46999999999999999999999999999999987554444445566788999999999999999999999999999999
Q ss_pred eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||+.| +|.+.+.. .+.+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~------ 167 (307)
T cd06607 95 EYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP------ 167 (307)
T ss_pred HhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC------
Confidence 99975 77777654 45799999999999999999999999999999999999999999999999999865422
Q ss_pred CCCCCCCCccceecCCcCCChhhhc---CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-CCC-CCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLN---SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD-IRF-PNYF 278 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~-~~~-p~~~ 278 (489)
...+.|+..|+|||++. ...++.++|||||||++|+|++|++||.+.+.......+.... ..+ +..+
T Consensus 168 --------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (307)
T cd06607 168 --------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDW 239 (307)
T ss_pred --------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhh
Confidence 12456888999999874 4568889999999999999999999998887766555544332 222 3357
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
+..++++|.+||+.||++||++ .+++.||||..
T Consensus 240 ~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~ 272 (307)
T cd06607 240 SDYFRNFVDSCLQKIPQDRPSS-----EELLKHRFVLR 272 (307)
T ss_pred CHHHHHHHHHHhcCChhhCcCH-----HHHhcChhhcc
Confidence 8899999999999999999998 89999999974
No 242
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.2e-42 Score=338.00 Aligned_cols=256 Identities=30% Similarity=0.481 Sum_probs=220.6
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
+.|+..+.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.++||||+++++.+.+....|+||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence 457888999999999999999999999999999875422 234456888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
||+++++|.+++.. +.+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++..+....
T Consensus 82 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~----- 155 (277)
T cd06642 82 EYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----- 155 (277)
T ss_pred EccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc-----
Confidence 99999999998865 579999999999999999999999999999999999999999999999999987654321
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-CCCCCCCCCHHHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-DIRFPNYFSDAAR 283 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-~~~~p~~~~~~~~ 283 (489)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|+.||...........+... ...++..++.++.
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (277)
T cd06642 156 -----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFK 230 (277)
T ss_pred -----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHH
Confidence 1122356889999999999888999999999999999999999999877666555544333 2335556889999
Q ss_pred HHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 284 DLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 284 ~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
++|.+||+.+|++||++ .++++||||....
T Consensus 231 ~li~~~l~~~p~~Rp~~-----~~il~~~~~~~~~ 260 (277)
T cd06642 231 EFVEACLNKDPRFRPTA-----KELLKHKFITRYT 260 (277)
T ss_pred HHHHHHccCCcccCcCH-----HHHHHhHHHHHHh
Confidence 99999999999999998 8999999997644
No 243
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6.1e-41 Score=326.45 Aligned_cols=245 Identities=22% Similarity=0.344 Sum_probs=209.7
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
+..++|++++.||+|+||.||+|.+. ++..||+|.+.... .....+.+|+.+++.++||||+++++.+.+....|
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIY 77 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 45689999999999999999999974 56789999876532 23456778999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 122 MALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
++|||+++|+|.+++.+. ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++.......
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 999999999999998753 568999999999999999999999999999999999999999999999999998654321
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNY 277 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~ 277 (489)
. .......++..|+|||.+....++.++|+|||||++|+|++ |..||.+.+.......+... ....+..
T Consensus 158 ~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 228 (261)
T cd05072 158 Y---------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMEN 228 (261)
T ss_pred e---------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 1 11112345678999999988889999999999999999998 99999988877776666543 2334456
Q ss_pred CCHHHHHHHHHhhccCCCCCCCC
Q 011287 278 FSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 278 ~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
++.++.+++.+||..+|++||++
T Consensus 229 ~~~~~~~li~~~l~~~p~~Rp~~ 251 (261)
T cd05072 229 CPDELYDIMKTCWKEKAEERPTF 251 (261)
T ss_pred CCHHHHHHHHHHccCCcccCcCH
Confidence 88999999999999999999998
No 244
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.4e-41 Score=325.78 Aligned_cols=240 Identities=25% Similarity=0.416 Sum_probs=203.3
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGG 130 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg 130 (489)
+.||+|+||.||+|++..+++.||+|.+.... .......+.+|..+++.++||||+++++++.+...+|+||||+.++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 46899999999999999999999999886432 2334456778999999999999999999999999999999999999
Q ss_pred ChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 131 ELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 131 ~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
+|.+++.+.+ .+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.........
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-------- 150 (252)
T cd05084 79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA-------- 150 (252)
T ss_pred cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccccccc--------
Confidence 9999997654 5899999999999999999999999999999999999999999999999998754321100
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCCCHHHHHHHH
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYFSDAARDLID 287 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~Li~ 287 (489)
.......++..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+.......+... ...+|..++..+.+|+.
T Consensus 151 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 230 (252)
T cd05084 151 STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLME 230 (252)
T ss_pred ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHH
Confidence 00011123457999999998889999999999999999997 99999887776655555442 44567788999999999
Q ss_pred HhhccCCCCCCCC
Q 011287 288 RLLDVDPSGRPGA 300 (489)
Q Consensus 288 ~~L~~dP~~R~t~ 300 (489)
+||+.||++||++
T Consensus 231 ~~l~~~p~~Rps~ 243 (252)
T cd05084 231 RCWEYDPGQRPSF 243 (252)
T ss_pred HHcCCChhhCcCH
Confidence 9999999999998
No 245
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.1e-41 Score=336.69 Aligned_cols=256 Identities=27% Similarity=0.438 Sum_probs=207.8
Q ss_pred CeEEeeEEeeeCceEEEEEEEcC--CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC--CEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKID--TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT--FSLY 121 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~--tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~ly 121 (489)
+|++.+.||+|+||.||+|.+.. +++.||+|.+.+...........+.+|+.+++.++||||+++++++.+. ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 58999999999999999999988 8999999999875333333445567799999999999999999999988 8899
Q ss_pred EEEeccCCCChHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC----CCCEEEeeccCc
Q 011287 122 MALESCEGGELFDQITSK-----GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA----DGHIKIADFGSV 192 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~-----~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~----~g~ikL~DFG~a 192 (489)
+||||+++ +|.+.+... ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+||+|||++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 99999975 777766532 36899999999999999999999999999999999999999 899999999999
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHH---------
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWL--------- 262 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~--------- 262 (489)
..+...... ........++..|+|||++.+. .++.++|+|||||++|+|++|++||.+.....
T Consensus 160 ~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 232 (316)
T cd07842 160 RLFNAPLKP-------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRD 232 (316)
T ss_pred cccCCCccc-------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHH
Confidence 865433210 1122345789999999988664 57889999999999999999999998654321
Q ss_pred HHHHHHh--------------------------cCCCCC-----------CCCCHHHHHHHHHhhccCCCCCCCCCCCCH
Q 011287 263 IFQRIIA--------------------------RDIRFP-----------NYFSDAARDLIDRLLDVDPSGRPGAGPGGY 305 (489)
Q Consensus 263 ~~~~i~~--------------------------~~~~~p-----------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~ 305 (489)
.+..+.. ....++ ...+.++.++|.+||+.||++|||+
T Consensus 233 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~----- 307 (316)
T cd07842 233 QLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITA----- 307 (316)
T ss_pred HHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCH-----
Confidence 1111100 011111 1467789999999999999999998
Q ss_pred HHHhcCCCC
Q 011287 306 AVLKMHPFF 314 (489)
Q Consensus 306 ~~l~~hpff 314 (489)
.+++.||||
T Consensus 308 ~eil~~~~f 316 (316)
T cd07842 308 EEALEHPYF 316 (316)
T ss_pred HHHhcCCCC
Confidence 899999998
No 246
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=8.8e-41 Score=326.48 Aligned_cols=253 Identities=19% Similarity=0.308 Sum_probs=213.7
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCC---CcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDT---GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~t---g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
..++|++.+.||+|+||.||+|++..+ ...||+|++.... .......+..|..+++.++||||+++++.+.+...
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 79 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRP 79 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCc
Confidence 467899999999999999999998654 4689999986542 22334556779999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 120 LYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.|+||||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++..+...
T Consensus 80 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 80 VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 99999999999999999764 57999999999999999999999999999999999999999999999999999876421
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPN 276 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~ 276 (489)
.. ........++..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+... ....|.
T Consensus 160 ~~--------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 231 (266)
T cd05033 160 EA--------TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPM 231 (266)
T ss_pred cc--------ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 10 001112234678999999998889999999999999999998 99999888777777666654 334566
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
..+..+.+|+.+||+.+|++||++ .++++
T Consensus 232 ~~~~~l~~li~~cl~~~p~~Rp~~-----~ei~~ 260 (266)
T cd05033 232 DCPSALYQLMLDCWQKDRNERPTF-----SQIVS 260 (266)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCH-----HHHHH
Confidence 789999999999999999999998 55654
No 247
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-44 Score=337.93 Aligned_cols=255 Identities=29% Similarity=0.446 Sum_probs=225.8
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
+-|.++..||+|+||.||+|.++++|+.+|||.+... ...+.+..|+.++++++.|++|++|+.|.....+|+||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVM 107 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVM 107 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeeh
Confidence 4589999999999999999999999999999987543 34556777999999999999999999999999999999
Q ss_pred eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|||..|++.+.+.. +.++++.++..++...+.||+|||...-+|||||..|||++.+|+.||+|||.|..+.+.
T Consensus 108 EYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT----- 182 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT----- 182 (502)
T ss_pred hhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhh-----
Confidence 99999999998875 467999999999999999999999999999999999999999999999999999866432
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC---CCCCCCCCH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD---IRFPNYFSD 280 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~---~~~p~~~~~ 280 (489)
....++..||+.|||||++..-.|+.++||||||++..||.-|++||..-.+....-.|.... +.-|+.++.
T Consensus 183 -----MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~ 257 (502)
T KOG0574|consen 183 -----MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSS 257 (502)
T ss_pred -----HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhh
Confidence 245678899999999999999999999999999999999999999998877765444444332 234667999
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCc
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDW 319 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~ 319 (489)
++.|+|+.||.+.|++|-|| -++++|||.++..-
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA-----~~L~~H~FiknA~g 291 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTA-----LRLCEHTFIKNAPG 291 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHH-----HHHhhhhhhcCCCc
Confidence 99999999999999999999 88999999986543
No 248
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.7e-41 Score=329.48 Aligned_cols=253 Identities=19% Similarity=0.307 Sum_probs=210.8
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEc-----CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKI-----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~-----~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.++||||+++++++.+.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 3568999999999999999999864 246789999985432 112234567799999999999999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEe
Q 011287 118 FSLYMALESCEGGELFDQITSKG----------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIA 187 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~----------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~ 187 (489)
...++||||+++|+|.+++.+.. .++...+..++.|++.||.|||+.|++||||||+||+++.++.++|+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence 99999999999999999987532 35778899999999999999999999999999999999999999999
Q ss_pred eccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHH
Q 011287 188 DFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQR 266 (489)
Q Consensus 188 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~ 266 (489)
|||++......... .......++..|+|||++.+..++.++|+|||||++|+|++ |..||.+.+.......
T Consensus 162 dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~ 233 (277)
T cd05062 162 DFGMTRDIYETDYY--------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRF 233 (277)
T ss_pred CCCCccccCCccee--------ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 99998755332110 01112345778999999998889999999999999999999 7999998888777766
Q ss_pred HHhcC-CCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 267 IIARD-IRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 267 i~~~~-~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
+.... ..+|...+..+.++|.+||+.||++||++ .++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~e~l~ 273 (277)
T cd05062 234 VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF-----LEIIS 273 (277)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence 65544 45677889999999999999999999998 66654
No 249
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.8e-41 Score=329.61 Aligned_cols=255 Identities=21% Similarity=0.368 Sum_probs=213.8
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcC-----CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKID-----TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD 116 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~-----tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 116 (489)
...++|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|..+++.++|+||+++++++.+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFE 80 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence 345789999999999999999999987 78899999886432 22334557779999999999999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC---CEEE
Q 011287 117 TFSLYMALESCEGGELFDQITSKG-------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG---HIKI 186 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~~-------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g---~ikL 186 (489)
....|+||||++|++|.+++.+.+ .+++..+..++.||+.||+|||++|++||||||+||+++.++ .+||
T Consensus 81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 81 RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEe
Confidence 889999999999999999997653 489999999999999999999999999999999999998765 5999
Q ss_pred eeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHH
Q 011287 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQ 265 (489)
Q Consensus 187 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~ 265 (489)
+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+......
T Consensus 161 ~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~ 232 (277)
T cd05036 161 ADFGMARDIYRASYY--------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVME 232 (277)
T ss_pred ccCccccccCCccce--------ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 999999865322110 01112234567999999998889999999999999999997 999999888777666
Q ss_pred HHHhc-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcC
Q 011287 266 RIIAR-DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMH 311 (489)
Q Consensus 266 ~i~~~-~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~h 311 (489)
.+... ...+|..++..+.+++.+||+.||++||++ .++++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~-----~~vl~~ 274 (277)
T cd05036 233 FVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNF-----ATILER 274 (277)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCH-----HHHHHH
Confidence 55443 455678899999999999999999999998 777764
No 250
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2.1e-41 Score=334.72 Aligned_cols=260 Identities=25% Similarity=0.381 Sum_probs=212.0
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCCEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ly 121 (489)
..++|++.+.||+|+||.||++++..+++.||+|.+.+.... .....+..|+.++.++. ||||+++++++.++...+
T Consensus 2 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~ 79 (288)
T cd06616 2 TAEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCW 79 (288)
T ss_pred cHHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEE
Confidence 356889999999999999999999999999999998764322 33455777999998885 999999999999999999
Q ss_pred EEEeccCCCChHHHH---H--hCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeeccCCCCeeeCCCCCEEEeeccCcccc
Q 011287 122 MALESCEGGELFDQI---T--SKGHLSEDEARFYTAEVVDALEYIHSM-GLIHRDIKPENLLLTADGHIKIADFGSVKPM 195 (489)
Q Consensus 122 lV~E~~~gg~L~~~l---~--~~~~l~e~~~~~i~~qil~aL~~LH~~-gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~ 195 (489)
++|||+.+ +|.++. . ..+.+++..+..++.|++.||+|||+. ||+||||||+||+++.++.++|+|||++..+
T Consensus 80 ~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 80 ICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred EEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 99999865 554432 2 236799999999999999999999975 9999999999999999999999999998754
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcCC---CCCCCCcchhhhHHHHHHhhCCCCCCCCCH-HHHHHHHHhcC
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS---PATFGNDLWALGCTLYQMLSGTSPFKDTSE-WLIFQRIIARD 271 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~---~~~~~sDiwSLG~ilyelltG~~PF~~~~~-~~~~~~i~~~~ 271 (489)
.... ......|+..|+|||++.+. .++.++|+|||||++|+|++|++||..... .+....+....
T Consensus 159 ~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 227 (288)
T cd06616 159 VDSI-----------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGD 227 (288)
T ss_pred ccCC-----------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCC
Confidence 3211 11233688999999999776 688999999999999999999999977542 22223333222
Q ss_pred -CCC----CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCccc
Q 011287 272 -IRF----PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKN 321 (489)
Q Consensus 272 -~~~----p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~ 321 (489)
..+ +..++.++.+||.+||+.||++||++ +++++||||+...|.+
T Consensus 228 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~-----~~i~~~~~~~~~~~~~ 277 (288)
T cd06616 228 PPILSNSEEREFSPSFVNFINLCLIKDESKRPKY-----KELLEHPFIKDYEERN 277 (288)
T ss_pred CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCH-----HHHhcChhhhchhhcc
Confidence 122 23478999999999999999999998 8999999999876654
No 251
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=7.2e-41 Score=330.79 Aligned_cols=258 Identities=29% Similarity=0.478 Sum_probs=223.6
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.+.|++.+.||.|+||.||+|.+..++..||+|++..... ....+..|+.+++.++|+||+++++.+......|+|
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4669999999999999999999998999999999976432 345677899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
+||+++++|.+++...+ .+++..+..++.|++.||.|||+.|++|+||+|+||+++.+++++|+|||++.......
T Consensus 94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~--- 170 (286)
T cd06614 94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK--- 170 (286)
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch---
Confidence 99999999999999876 89999999999999999999999999999999999999999999999999986543221
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-C--CCCCCC
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-R--FPNYFS 279 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~--~p~~~~ 279 (489)
.......++..|+|||++.+..++.++|+|||||++|+|++|..||...+.......+..... . .+..++
T Consensus 171 -------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (286)
T cd06614 171 -------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWS 243 (286)
T ss_pred -------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCC
Confidence 122344678899999999988899999999999999999999999998777665555544322 2 233478
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcc
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWK 320 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~ 320 (489)
..++++|.+||+.+|.+||++ .+++.|+||....|.
T Consensus 244 ~~l~~li~~~l~~~p~~Rpt~-----~~il~~~~~~~~~~~ 279 (286)
T cd06614 244 PEFKDFLNKCLVKDPEKRPSA-----EELLQHPFLKKACPK 279 (286)
T ss_pred HHHHHHHHHHhccChhhCcCH-----HHHhhChHhhccCch
Confidence 999999999999999999998 899999999986554
No 252
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=2.1e-41 Score=326.03 Aligned_cols=234 Identities=30% Similarity=0.486 Sum_probs=201.0
Q ss_pred eCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCCChHHH
Q 011287 56 GSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQ 135 (489)
Q Consensus 56 G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L~~~ 135 (489)
|.||.||+|+++.+++.||+|.+.+.. ....|...+....||||+++++++.+....|+||||++||+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999999999999999986542 122344445556799999999999999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCccce
Q 011287 136 ITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215 (489)
Q Consensus 136 l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~ 215 (489)
+.+...+++..+..++.|++.||+|||+.||+||||||+||+++.++.++|+|||.+..+... ....
T Consensus 76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-------------~~~~ 142 (237)
T cd05576 76 ISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-------------CDGE 142 (237)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-------------cccC
Confidence 988878999999999999999999999999999999999999999999999999987654321 1223
Q ss_pred ecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhhccCCC
Q 011287 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRLLDVDPS 295 (489)
Q Consensus 216 ~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L~~dP~ 295 (489)
.++..|+|||.+.+..++.++|+||+||++|+|++|+.||........ ......+|..+++.+++||.+||+.||+
T Consensus 143 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~dp~ 218 (237)
T cd05576 143 AVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----THTTLNIPEWVSEEARSLLQQLLQFNPT 218 (237)
T ss_pred CcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----cccccCCcccCCHHHHHHHHHHccCCHH
Confidence 457789999999888899999999999999999999998865432110 1123457888999999999999999999
Q ss_pred CCCCCCCCCHHHHhcCCCC
Q 011287 296 GRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 296 ~R~t~~~~~~~~l~~hpff 314 (489)
+||++++.+++++++||||
T Consensus 219 ~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 219 ERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred HhcCCCccchHHHHcCCCC
Confidence 9999988889999999998
No 253
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=344.53 Aligned_cols=244 Identities=23% Similarity=0.373 Sum_probs=213.6
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
..+.+.+++.||+|-||.|++|.... ...||+|.+.... ...+.+.+|+++|++|+|++||++++++..+..+||
T Consensus 204 ~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~----m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyI 278 (468)
T KOG0197|consen 204 PREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGS----MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYI 278 (468)
T ss_pred cHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccc----cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEE
Confidence 34557889999999999999999943 4589999986542 233446689999999999999999999999889999
Q ss_pred EEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 123 ALESCEGGELFDQITS--KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~--~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
|||||+.|+|.++|+. .+.+...+...+++|||+|++||+++++|||||-..||||++++.+||+|||+|+...++..
T Consensus 279 VtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y 358 (468)
T KOG0197|consen 279 VTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY 358 (468)
T ss_pred EEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence 9999999999999997 45699999999999999999999999999999999999999999999999999996554433
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYF 278 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~ 278 (489)
....+ .--...|.|||.+....++.+|||||||++|+||+| |+.|+.+.+..+..+.+.++ .+.-|+.+
T Consensus 359 ~~~~~---------~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~C 429 (468)
T KOG0197|consen 359 TASEG---------GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGC 429 (468)
T ss_pred eecCC---------CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCC
Confidence 22111 112456999999999999999999999999999999 99999999999999888776 45678899
Q ss_pred CHHHHHHHHHhhccCCCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
|+++.+|+..|+..+|++|||.
T Consensus 430 P~~vY~lM~~CW~~~P~~RPtF 451 (468)
T KOG0197|consen 430 PDEVYELMKSCWHEDPEDRPTF 451 (468)
T ss_pred CHHHHHHHHHHhhCCcccCCCH
Confidence 9999999999999999999997
No 254
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.5e-41 Score=334.95 Aligned_cols=255 Identities=29% Similarity=0.471 Sum_probs=217.8
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.++|++.+.||+|+||.||++.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++.+....|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 37899999999999999999999999999999998643 223345677899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
+||+++++|.+++.+. .+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~---- 169 (293)
T cd06647 95 MEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---- 169 (293)
T ss_pred EecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc----
Confidence 9999999999998764 58999999999999999999999999999999999999999999999999887543221
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh-cC--CCCCCCCCH
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA-RD--IRFPNYFSD 280 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~-~~--~~~p~~~~~ 280 (489)
.......|++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+.......+.. .. ...+..++.
T Consensus 170 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (293)
T cd06647 170 ------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSA 243 (293)
T ss_pred ------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCH
Confidence 122345688999999999888899999999999999999999999988766544333322 22 223445788
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.++++|++||+.+|++||++ .+++.|+||+..
T Consensus 244 ~l~~li~~~l~~~p~~Rp~~-----~~il~h~~~~~~ 275 (293)
T cd06647 244 IFRDFLNRCLEMDVEKRGSA-----KELLQHPFLKIA 275 (293)
T ss_pred HHHHHHHHHccCChhhCcCH-----HHHhcCHHHhcC
Confidence 99999999999999999988 899999999854
No 255
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=9.9e-41 Score=323.28 Aligned_cols=246 Identities=26% Similarity=0.424 Sum_probs=214.9
Q ss_pred eEEeeeCceEEEEEEEcCC---CcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEecc
Q 011287 51 KIYGVGSYSKVVRAKKIDT---GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESC 127 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~t---g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~ 127 (489)
+.||+|+||.||+|.+... +..||+|++....... ....+..|+.+++.++|+||+++++++.+...+++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4789999999999999866 9999999997653322 4567888999999999999999999999999999999999
Q ss_pred CCCChHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 128 EGGELFDQITSK---------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 128 ~gg~L~~~l~~~---------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
++++|.+++... ..+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 999999999875 77999999999999999999999999999999999999999999999999999866433
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPN 276 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~ 276 (489)
.. ........++..|+|||.+....++.++|+|||||++|+|++ |..||.........+.+... ....|.
T Consensus 159 ~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 230 (262)
T cd00192 159 DY--------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPE 230 (262)
T ss_pred cc--------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCc
Confidence 21 112234567889999999988889999999999999999999 69999999888888777753 345678
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMH 311 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~h 311 (489)
.++.++.+++.+||+.||++||++ .++++|
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rps~-----~~l~~~ 260 (262)
T cd00192 231 YCPDELYELMLSCWQLDPEDRPTF-----SELVER 260 (262)
T ss_pred cCChHHHHHHHHHccCCcccCcCH-----HHHHHh
Confidence 889999999999999999999998 667653
No 256
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-40 Score=328.09 Aligned_cols=255 Identities=29% Similarity=0.472 Sum_probs=212.5
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc--CCEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD--TFSLYM 122 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~~~lyl 122 (489)
++|++.+.||.|++|.||+|.+..+++.||+|.+..... ......+.+|+++++.++||||++++++|.+ ...+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 579999999999999999999999999999999875422 2344567789999999999999999998865 347899
Q ss_pred EEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 123 ALESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999999887653 356899999999999999999999999999999999999999999999999998754321
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCC-----CHHHHHHHHHhcC-C
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDT-----SEWLIFQRIIARD-I 272 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~-----~~~~~~~~i~~~~-~ 272 (489)
......++..|+|||.+.+..++.++|+|||||++|+|++|..||... ...+....+.... .
T Consensus 159 ------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
T cd06621 159 ------------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNP 226 (287)
T ss_pred ------------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCch
Confidence 112346788999999999889999999999999999999999999865 2233344433321 1
Q ss_pred CCC------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 273 RFP------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 273 ~~p------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
.++ ..+++.+.+||.+||..||++|||+ .+++.||||....
T Consensus 227 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~eil~~~~~~~~~ 273 (287)
T cd06621 227 ELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTP-----WDMLEHPWIKAQM 273 (287)
T ss_pred hhccCCCCCCchHHHHHHHHHHHcCCCcccCCCH-----HHHHhCccccccc
Confidence 122 1346789999999999999999998 8999999997543
No 257
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.4e-40 Score=334.29 Aligned_cols=252 Identities=29% Similarity=0.411 Sum_probs=216.6
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
..|...+.||+|+||.||+|++..++..||+|++.+...........+..|+.+++.++|||++++++++.+....|+||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 34889999999999999999999999999999997654444445566788999999999999999999999999999999
Q ss_pred eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||+.| +|.+.+.. ...+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++.....
T Consensus 105 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~------ 177 (317)
T cd06635 105 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP------ 177 (317)
T ss_pred eCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC------
Confidence 99975 78777754 45699999999999999999999999999999999999999999999999999864322
Q ss_pred CCCCCCCCccceecCCcCCChhhhc---CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC-C-CCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLN---SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR-F-PNYF 278 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~-~-p~~~ 278 (489)
.....|+..|+|||.+. ...++.++|+|||||++|+|++|.+||...+.......+...... . +..+
T Consensus 178 --------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (317)
T cd06635 178 --------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEW 249 (317)
T ss_pred --------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccc
Confidence 12346888999999974 456888999999999999999999999888777666666554332 2 3457
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
++.+++||.+||+.+|.+||++ .++++|+|+..
T Consensus 250 ~~~l~~li~~~l~~~p~~Rpt~-----~~il~~~~~~~ 282 (317)
T cd06635 250 SDYFRNFVDSCLQKIPQDRPTS-----EELLKHMFVLR 282 (317)
T ss_pred cHHHHHHHHHHccCCcccCcCH-----HHHHhChhhhc
Confidence 8899999999999999999998 89999999953
No 258
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-42 Score=301.58 Aligned_cols=256 Identities=27% Similarity=0.463 Sum_probs=219.0
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
+.|.-.+.||+|.||+||+|++++|++.||+|.+.... ..+.......+|+-+|+.++|.|||+++++...+..+-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldd-ddegvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccC-CCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 45777889999999999999999999999999987653 23444556778999999999999999999999999999999
Q ss_pred eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|||.. +|..+... +|.++.+.++.++.|++.+|.|+|++++.||||||.|+||+.+|.+||+|||+|+.+.-+-
T Consensus 81 e~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipv---- 155 (292)
T KOG0662|consen 81 EFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV---- 155 (292)
T ss_pred HHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce----
Confidence 99976 88888765 4789999999999999999999999999999999999999999999999999998765321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCCC-CCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC----------
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSSP-ATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD---------- 271 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~---------- 271 (489)
.-.+.-+-|.+|++|.++.+.. |+...|+||.|||+.|+.. |++.|.+.+-.+++.+|...-
T Consensus 156 ------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps 229 (292)
T KOG0662|consen 156 ------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPS 229 (292)
T ss_pred ------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCc
Confidence 1112347799999999998765 8999999999999999986 899999999998888887521
Q ss_pred ----------CCCC---------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 272 ----------IRFP---------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 272 ----------~~~p---------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
+.+| +.++...+||++++|.-+|.+|++| ++.++||||.+.
T Consensus 230 ~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisa-----eaalqhpyf~d~ 289 (292)
T KOG0662|consen 230 MTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISA-----EAALQHPYFSDF 289 (292)
T ss_pred cccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCH-----HHHhcCcccccc
Confidence 1111 1245678999999999999999999 889999999864
No 259
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.9e-41 Score=328.99 Aligned_cols=255 Identities=30% Similarity=0.536 Sum_probs=216.1
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC---CCCccEEEEEEEcCCEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD---HPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~~~lyl 122 (489)
.|++.+.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.+++.++ |||++++++++.+....|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 5888999999999999999999999999999987542 2233456778999999986 9999999999999999999
Q ss_pred EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 123 ALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
||||+++++|.+++.. +.+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++..+....
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS--- 155 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc---
Confidence 9999999999998876 479999999999999999999999999999999999999999999999999987654321
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-CCCCCC-CCC
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-DIRFPN-YFS 279 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-~~~~p~-~~~ 279 (489)
.......|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+.......+... ...++. .++
T Consensus 156 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (277)
T cd06917 156 -------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYS 228 (277)
T ss_pred -------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCC
Confidence 12234578999999999865 44788999999999999999999999887665544333322 123333 378
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
.++.+++.+||+.||++||++ .+++.|+||+...
T Consensus 229 ~~~~~~i~~~l~~~p~~R~~~-----~~il~~~~~~~~~ 262 (277)
T cd06917 229 KLLREFVAACLDEEPKERLSA-----EELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHHHHcCCCcccCcCH-----HHHhhChHhhccc
Confidence 899999999999999999998 8999999997643
No 260
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=7.1e-41 Score=325.49 Aligned_cols=248 Identities=22% Similarity=0.368 Sum_probs=210.2
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
..+|++.+.||+|+||.||+|++. ++..+|+|++.+.... ...+..|+.+++.++||||+++++++.+....|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 468999999999999999999885 5678999998654322 23456699999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|||+++++|.+++... +.+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-- 155 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-- 155 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc--
Confidence 9999999999999764 5689999999999999999999999999999999999999999999999999875432210
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCCCH
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYFSD 280 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~~~ 280 (489)
.......++..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+..+....+... ....|...+.
T Consensus 156 -------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
T cd05059 156 -------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPT 228 (256)
T ss_pred -------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCH
Confidence 00111123457999999998889999999999999999999 89999888777776666544 3456777899
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
++.+++.+||..+|++||++ .++++
T Consensus 229 ~~~~li~~cl~~~p~~Rpt~-----~~~l~ 253 (256)
T cd05059 229 EVYTIMYSCWHEKPEDRPAF-----KKLLS 253 (256)
T ss_pred HHHHHHHHHhcCChhhCcCH-----HHHHH
Confidence 99999999999999999998 66654
No 261
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.1e-41 Score=331.83 Aligned_cols=254 Identities=19% Similarity=0.321 Sum_probs=215.9
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCC-----CcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDT-----GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD 116 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~t-----g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 116 (489)
+.+.+|++.+.||+|+||.||+|.+..+ ++.||+|++.... .......+..|..++..++||||+++++++.+
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 79 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK 79 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence 4567899999999999999999997543 5889999987542 22334567789999999999999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC
Q 011287 117 TFSLYMALESCEGGELFDQITSK----------------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA 180 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~----------------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~ 180 (489)
...+++++||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++++
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 99999999999999999998532 34788899999999999999999999999999999999999
Q ss_pred CCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCC
Q 011287 181 DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259 (489)
Q Consensus 181 ~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~ 259 (489)
++.+||+|||+++.+..... ........+++.|+|||.+.+..++.++|||||||++|+|++ |..||.+.+
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 231 (283)
T cd05091 160 KLNVKISDLGLFREVYAADY--------YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 231 (283)
T ss_pred CCceEecccccccccccchh--------eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999999999886533211 111223456789999999988889999999999999999998 999999988
Q ss_pred HHHHHHHHHhcCC-CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 260 EWLIFQRIIARDI-RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 260 ~~~~~~~i~~~~~-~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
.......+..... .+|..++..+.+|+.+||+.+|.+||++ ++++.
T Consensus 232 ~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~-----~~i~~ 278 (283)
T cd05091 232 NQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRF-----KDIHS 278 (283)
T ss_pred HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCH-----HHHHH
Confidence 8888888777654 4578899999999999999999999998 66654
No 262
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.6e-40 Score=322.45 Aligned_cols=246 Identities=32% Similarity=0.532 Sum_probs=210.4
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++|++.+.||+|+||.||+|.+..+|+.||+|.+.............+.+|+.++++++|+||+++++.+.+....++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 68999999999999999999999999999999987654444445667888999999999999999999999999999999
Q ss_pred eccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 125 ESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 125 E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
||+++|+|..++.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++..+....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~- 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-
Confidence 99999999998864 2458999999999999999999999999999999999999999999999999987553221
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC--HHHHHHHHHhcCC-CCCC-
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS--EWLIFQRIIARDI-RFPN- 276 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~--~~~~~~~i~~~~~-~~p~- 276 (489)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|+.||.... .......+..+.. ..|.
T Consensus 161 ---------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
T cd08224 161 ---------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPAD 231 (267)
T ss_pred ---------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChh
Confidence 11234568899999999998889999999999999999999999996543 2233444443322 3444
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.++..+.++|.+||..+|++||++
T Consensus 232 ~~~~~~~~~i~~cl~~~p~~Rp~~ 255 (267)
T cd08224 232 HYSEELRDLVSRCINPDPEKRPDI 255 (267)
T ss_pred hcCHHHHHHHHHHcCCCcccCCCH
Confidence 688899999999999999999998
No 263
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.9e-41 Score=340.65 Aligned_cols=258 Identities=27% Similarity=0.410 Sum_probs=219.7
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC-----EE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF-----SL 120 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~l 120 (489)
+|++.+.||.|++|.||+|++..+|+.||+|.+.+... .......+.+|+.+++.++||||+++++++.+.. .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 58999999999999999999999999999999876432 2334456778999999999999999999998775 79
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
|+||||+.+ +|.+++.+.+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++........
T Consensus 80 ~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~ 158 (330)
T cd07834 80 YIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED 158 (330)
T ss_pred EEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence 999999974 8999998878899999999999999999999999999999999999999999999999999986544321
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC------
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR------ 273 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~------ 273 (489)
. ........++..|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+..+.+..+......
T Consensus 159 ~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 231 (330)
T cd07834 159 E-------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDL 231 (330)
T ss_pred c-------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHh
Confidence 0 1122345789999999999887 7899999999999999999999999988877666655442110
Q ss_pred -------------------------CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 274 -------------------------FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 274 -------------------------~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
....++.++.+||.+||+.||++||++ ++++.||||+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~ll~~~~~~~~ 295 (330)
T cd07834 232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITA-----DEALAHPYLAQL 295 (330)
T ss_pred hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCH-----HHHHhCccHHhh
Confidence 112368899999999999999999998 899999999864
No 264
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.2e-40 Score=330.28 Aligned_cols=250 Identities=20% Similarity=0.329 Sum_probs=211.9
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEc-----CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKI-----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD 116 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~-----~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 116 (489)
+...+|.+.+.||+|+||.||+|++. .++..+++|.+.... ......+.+|+.++++++||||+++++++.+
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (291)
T cd05094 2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGD 78 (291)
T ss_pred CchHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEcc
Confidence 45678999999999999999999863 346679999885432 2333557789999999999999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC
Q 011287 117 TFSLYMALESCEGGELFDQITSKG----------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA 180 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~~----------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~ 180 (489)
....++||||+++++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA 158 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence 999999999999999999997643 3899999999999999999999999999999999999999
Q ss_pred CCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCC
Q 011287 181 DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259 (489)
Q Consensus 181 ~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~ 259 (489)
++.++|+|||++........ ........++..|+|||.+.+..++.++|||||||++|+|++ |..||...+
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 230 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDY--------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 230 (291)
T ss_pred CCcEEECCCCcccccCCCce--------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999999975433211 111223457788999999999899999999999999999998 999998888
Q ss_pred HHHHHHHHHhcCC-CCCCCCCHHHHHHHHHhhccCCCCCCCCCC
Q 011287 260 EWLIFQRIIARDI-RFPNYFSDAARDLIDRLLDVDPSGRPGAGP 302 (489)
Q Consensus 260 ~~~~~~~i~~~~~-~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~ 302 (489)
.......+..... ..+..++..+.+|+.+||+.||++||++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 274 (291)
T cd05094 231 NTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKE 274 (291)
T ss_pred HHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHH
Confidence 8777776665543 355678999999999999999999999843
No 265
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1e-40 Score=328.98 Aligned_cols=248 Identities=21% Similarity=0.332 Sum_probs=211.9
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEc-----CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKI-----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD 116 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~-----~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 116 (489)
+...+|.+.++||+|+||.||+|... .++..+|+|.+... .......+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTE 78 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEec
Confidence 45678999999999999999999753 35778999987643 33445678889999999999999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC
Q 011287 117 TFSLYMALESCEGGELFDQITSKG---------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD 181 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~~---------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~ 181 (489)
....|+||||+.+|+|.+++...+ .+++..+..++.||+.||+|||++|++||||||+|||++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG 158 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence 999999999999999999997653 48899999999999999999999999999999999999999
Q ss_pred CCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCH
Q 011287 182 GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSE 260 (489)
Q Consensus 182 g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~ 260 (489)
+.++|+|||++..+..... ........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+.
T Consensus 159 ~~~kL~dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 230 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDY--------YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN 230 (280)
T ss_pred CCEEECCCCceeEcCCCce--------eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH
Confidence 9999999999875432211 011123345788999999999999999999999999999998 9999988887
Q ss_pred HHHHHHHHhc-CCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 261 WLIFQRIIAR-DIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 261 ~~~~~~i~~~-~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
......+... ....|..+++.+.+||.+||+.||.+||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~ 271 (280)
T cd05092 231 TEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVI 271 (280)
T ss_pred HHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence 7777666554 345677889999999999999999999998
No 266
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5e-41 Score=326.84 Aligned_cols=243 Identities=21% Similarity=0.345 Sum_probs=212.0
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
..+|++++.||.|+||.||+|++.. +..+|+|++.... ......+..|+.+++.++||||+++++++.+....|+|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 4689999999999999999999987 8999999987652 22345577899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 124 LESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
|||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~- 159 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY- 159 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc-
Confidence 9999999999999863 4689999999999999999999999999999999999999999999999999976533211
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCCC
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYFS 279 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~~ 279 (489)
......++..|+|||.+.+..++.++|+|||||++|+|++ |+.||.+.+..+++..+... ....|...+
T Consensus 160 ---------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (261)
T cd05148 160 ---------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCP 230 (261)
T ss_pred ---------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCC
Confidence 1112345678999999998889999999999999999998 89999988887777777654 345667889
Q ss_pred HHHHHHHHHhhccCCCCCCCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~ 300 (489)
+++.++|.+||+.||.+||++
T Consensus 231 ~~~~~~i~~~l~~~p~~Rpt~ 251 (261)
T cd05148 231 QEIYKIMLECWAAEPEDRPSF 251 (261)
T ss_pred HHHHHHHHHHcCCCchhCcCH
Confidence 999999999999999999998
No 267
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=6.1e-41 Score=327.35 Aligned_cols=247 Identities=31% Similarity=0.523 Sum_probs=210.1
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
+++|++.+.||+|+||.||+|++..+++.||||.+.+...........+.+|+.+++.++||||+++++.+.+....|++
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 36899999999999999999999999999999988765444444556777899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 124 LESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
|||+++++|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++..+....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999999998864 3468999999999999999999999999999999999999999999999999987653221
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH--HHHHHHHHhcCC-CC-C
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE--WLIFQRIIARDI-RF-P 275 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~--~~~~~~i~~~~~-~~-p 275 (489)
.......|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+... ....+.+..... .. +
T Consensus 161 ----------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T cd08229 161 ----------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPS 230 (267)
T ss_pred ----------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCc
Confidence 112245789999999999998899999999999999999999999976543 233344443322 12 2
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
..+++++++||.+||+.||++|||+
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~Rpt~ 255 (267)
T cd08229 231 DHYSEELRQLVNMCINPDPEKRPDI 255 (267)
T ss_pred ccccHHHHHHHHHhcCCCcccCCCH
Confidence 4578999999999999999999998
No 268
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.1e-40 Score=338.71 Aligned_cols=256 Identities=27% Similarity=0.391 Sum_probs=209.9
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC-------
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT------- 117 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------- 117 (489)
.+|.+.+.||.|+||.||+|.+..+|+.||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 78999999999999999999999999999999986543 23445677899999999999999999776543
Q ss_pred -------CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC-CCCEEEeec
Q 011287 118 -------FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA-DGHIKIADF 189 (489)
Q Consensus 118 -------~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~-~g~ikL~DF 189 (489)
..+|+||||+. ++|.+++.. +.+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence 36899999997 489888764 57999999999999999999999999999999999999974 557899999
Q ss_pred cCccccCCccccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 011287 190 GSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRII 268 (489)
Q Consensus 190 G~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~ 268 (489)
|.+..+...... .......+|+..|+|||++.. ..++.++|+|||||++|+|++|+.||.+.+.......+.
T Consensus 160 g~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 160 GLARIVDPHYSH-------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred ccceecCCcccc-------ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 998765322100 011122367889999998754 567889999999999999999999999887766555543
Q ss_pred hcCC------------------------------CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 269 ARDI------------------------------RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 269 ~~~~------------------------------~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.... .+...++.++.+||.+||+.||.+||++ .+++.||||+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~h~~~~~~ 306 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTA-----EEALMHPYMSCY 306 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCH-----HHHhCCCccccc
Confidence 3110 0123478899999999999999999998 899999999854
No 269
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=8.2e-41 Score=329.48 Aligned_cols=251 Identities=28% Similarity=0.432 Sum_probs=210.8
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEec
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALES 126 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~ 126 (489)
|++.+.||.|++|.||+|.+..+|..||+|++...... ......+.+|+.+++.++||||+++++++.+....|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 67899999999999999999999999999998765322 22334566799999999999999999999999999999999
Q ss_pred cCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 127 CEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 127 ~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
+. ++|.+++.... .+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||++..+....
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~----- 153 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV----- 153 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-----
Confidence 95 58999988765 69999999999999999999999999999999999999999999999999987543221
Q ss_pred CCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC------------
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD------------ 271 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~------------ 271 (489)
.......++..|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+......++....
T Consensus 154 -----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07835 154 -----RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVT 228 (283)
T ss_pred -----cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhh
Confidence 111233568899999988664 47889999999999999999999998877655444433210
Q ss_pred -----------------CCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 -----------------IRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 -----------------~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
......++..+.++|.+||+.||.+||++ .+++.||||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~il~~~~~ 283 (283)
T cd07835 229 SLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISA-----KAALQHPYF 283 (283)
T ss_pred hchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCH-----HHHhcCCCC
Confidence 01123567899999999999999999998 899999998
No 270
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.5e-40 Score=323.46 Aligned_cols=240 Identities=22% Similarity=0.332 Sum_probs=204.4
Q ss_pred EEeeeCceEEEEEEE--cCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 52 IYGVGSYSKVVRAKK--IDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 52 ~LG~G~~g~Vy~a~~--~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
.||+|+||.||+|.+ ..++..+|+|++.... ........+.+|+.+++.++||||+++++++.+ ...++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCC
Confidence 689999999999965 4678999999986543 233445667889999999999999999998864 467899999999
Q ss_pred CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 130 GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 130 g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
|+|.+++.+.+.+++..+..++.|++.||+|||++||+||||||.||+++.++.++|+|||++..+.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~------- 152 (257)
T cd05116 80 GPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY------- 152 (257)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCee-------
Confidence 9999999888889999999999999999999999999999999999999999999999999998654322100
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC-CCCCCCCCHHHHHHHH
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD-IRFPNYFSDAARDLID 287 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~Li~ 287 (489)
.......++..|+|||.+....++.++|+|||||++|+|++ |..||.+.+...+...+.... ..+|..+++++.+||.
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMK 232 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence 00112234678999999988889999999999999999998 999999988887777776543 4677889999999999
Q ss_pred HhhccCCCCCCCC
Q 011287 288 RLLDVDPSGRPGA 300 (489)
Q Consensus 288 ~~L~~dP~~R~t~ 300 (489)
+||+.||++||++
T Consensus 233 ~~~~~~p~~Rp~~ 245 (257)
T cd05116 233 LCWTYGVDERPGF 245 (257)
T ss_pred HHhccCchhCcCH
Confidence 9999999999998
No 271
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.6e-40 Score=323.44 Aligned_cols=249 Identities=20% Similarity=0.308 Sum_probs=211.6
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
..++|.+++.||+|+||.||+|+... +..+|+|.+..... ....+.+|..+++.++||||+++++++.+...+|+
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYI 76 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEE
Confidence 45789999999999999999998754 55799998865432 23456779999999999999999999999889999
Q ss_pred EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 123 ALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
||||+.+|+|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||.++.......
T Consensus 77 v~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY- 155 (256)
T ss_pred EEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce-
Confidence 99999999999999764 4689999999999999999999999999999999999999999999999999876533211
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcCC-CCCCCCC
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDI-RFPNYFS 279 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~~-~~p~~~~ 279 (489)
.......++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+.......+..... ..+...+
T Consensus 156 --------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (256)
T cd05113 156 --------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLAS 227 (256)
T ss_pred --------eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCC
Confidence 11112235678999999988889999999999999999998 9999998888777777766533 3466688
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
..+.+++.+||+.||.+||++ .+++.
T Consensus 228 ~~~~~li~~cl~~~p~~Rp~~-----~~ll~ 253 (256)
T cd05113 228 EKVYAIMYSCWHEKAEERPTF-----QQLLS 253 (256)
T ss_pred HHHHHHHHHHcCCCcccCCCH-----HHHHH
Confidence 999999999999999999998 66664
No 272
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.6e-41 Score=341.04 Aligned_cols=252 Identities=24% Similarity=0.370 Sum_probs=205.7
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEc-----CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEc-
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKI-----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQD- 116 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~-----~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~- 116 (489)
.++|++++.||+|+||.||+|.+. .+++.||+|++..... ......+..|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 458999999999999999999753 3468999999864421 22344567799999999 89999999998764
Q ss_pred CCEEEEEEeccCCCChHHHHHhC---------------------------------------------------------
Q 011287 117 TFSLYMALESCEGGELFDQITSK--------------------------------------------------------- 139 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~--------------------------------------------------------- 139 (489)
...+|++|||+++++|.+++...
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 46789999999999999988642
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCccce
Q 011287 140 ----GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215 (489)
Q Consensus 140 ----~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~ 215 (489)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++..+..... .......
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~--------~~~~~~~ 235 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--------YVRKGDA 235 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc--------hhhccCC
Confidence 2578999999999999999999999999999999999999999999999999986533211 1122234
Q ss_pred ecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc--CCCCCCCCCHHHHHHHHHhhcc
Q 011287 216 VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR--DIRFPNYFSDAARDLIDRLLDV 292 (489)
Q Consensus 216 ~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~Li~~~L~~ 292 (489)
.++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+...... ....|...++++.+++.+||+.
T Consensus 236 ~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~ 315 (337)
T cd05054 236 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHN 315 (337)
T ss_pred CCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccC
Confidence 56778999999999999999999999999999998 99999875544444333332 3345677899999999999999
Q ss_pred CCCCCCCCCCCCHHHHhc
Q 011287 293 DPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 293 dP~~R~t~~~~~~~~l~~ 310 (489)
+|++||++ .++++
T Consensus 316 ~p~~RPs~-----~ell~ 328 (337)
T cd05054 316 NPEDRPTF-----SELVE 328 (337)
T ss_pred ChhhCcCH-----HHHHH
Confidence 99999998 55654
No 273
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.5e-40 Score=322.35 Aligned_cols=245 Identities=19% Similarity=0.313 Sum_probs=209.0
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
+..++|++.+.||+|+||.||+|.+. +++.||+|.+..... ....+.+|+.++++++||||+++++++.....+|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 34578999999999999999999975 457899999865432 2345677999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 122 MALESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+||||+.+++|.+++.... .+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++.+....
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 9999999999999997654 69999999999999999999999999999999999999999999999999998764221
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNY 277 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~ 277 (489)
.. ......++..|+|||.+.+..++.++|+|||||++|+|++ |+.||.+.+.......+... ....+..
T Consensus 158 ~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 228 (261)
T cd05068 158 YE---------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPG 228 (261)
T ss_pred cc---------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCc
Confidence 00 0011123457999999998889999999999999999999 99999998877777666543 2345667
Q ss_pred CCHHHHHHHHHhhccCCCCCCCC
Q 011287 278 FSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 278 ~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.+..+.+++.+||+.||++||++
T Consensus 229 ~~~~~~~li~~~l~~~P~~Rp~~ 251 (261)
T cd05068 229 CPKELYDIMLDCWKEDPDDRPTF 251 (261)
T ss_pred CCHHHHHHHHHHhhcCcccCCCH
Confidence 89999999999999999999998
No 274
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.5e-40 Score=330.73 Aligned_cols=244 Identities=24% Similarity=0.388 Sum_probs=206.2
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCc--EEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGT--VYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~--~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ly 121 (489)
++|++.+.||+|+||.||+|.+..++. .+++|.+... ........+.+|+.++.++ +||||+++++++.+...+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 689999999999999999999987765 4688877532 2223345577899999999 7999999999999999999
Q ss_pred EEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEE
Q 011287 122 MALESCEGGELFDQITSKG----------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIK 185 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~----------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ik 185 (489)
+||||+++|+|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999997542 488999999999999999999999999999999999999999999
Q ss_pred EeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHH
Q 011287 186 IADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIF 264 (489)
Q Consensus 186 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~ 264 (489)
|+|||++...... ........+..|+|||++....++.++|||||||++|+|++ |..||.+.+.....
T Consensus 160 l~dfg~~~~~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~ 228 (297)
T cd05089 160 IADFGLSRGEEVY-----------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELY 228 (297)
T ss_pred ECCcCCCccccce-----------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 9999998632211 00111123457999999998889999999999999999997 99999998888877
Q ss_pred HHHHhc-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 265 QRIIAR-DIRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 265 ~~i~~~-~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
.++... ....|..++.++.+||.+||+.||.+||++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 266 (297)
T cd05089 229 EKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFA 266 (297)
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 777654 3446677899999999999999999999993
No 275
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.4e-40 Score=334.09 Aligned_cols=254 Identities=19% Similarity=0.310 Sum_probs=209.2
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcE----EEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTV----YALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~----vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
+...+|++.+.||+|+||.||+|++..++.. ||+|++... ........+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 4568999999999999999999998766654 899998643 2233445677899999999999999999988764
Q ss_pred CEEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 118 FSLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
..++|+||+.+|+|.+++... ..+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+.
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccccc
Confidence 578999999999999999874 468999999999999999999999999999999999999999999999999998764
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCC
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRF 274 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~ 274 (489)
..... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+..+.+... ....
T Consensus 161 ~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 232 (316)
T cd05108 161 ADEKE--------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 232 (316)
T ss_pred CCCcc--------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCC
Confidence 32210 01112234678999999999999999999999999999997 99999987766654433332 2344
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcC
Q 011287 275 PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMH 311 (489)
Q Consensus 275 p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~h 311 (489)
|..++.++.+++.+||..||++||++ .+++.+
T Consensus 233 ~~~~~~~~~~li~~cl~~~p~~Rps~-----~~l~~~ 264 (316)
T cd05108 233 PPICTIDVYMIMVKCWMIDADSRPKF-----RELIIE 264 (316)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCH-----HHHHHH
Confidence 56788999999999999999999998 555543
No 276
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.4e-40 Score=329.97 Aligned_cols=249 Identities=21% Similarity=0.296 Sum_probs=210.4
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCC----------------cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCC
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTG----------------TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP 105 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg----------------~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp 105 (489)
+..++|++++.||+|+||.||+|.+..++ ..||+|.+...... .....+.+|+.+++.++||
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~ 79 (296)
T cd05051 2 FPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NAREDFLKEVKILSRLSDP 79 (296)
T ss_pred CchhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhcCCC
Confidence 35679999999999999999999886644 56899998755322 3455678899999999999
Q ss_pred CccEEEEEEEcCCEEEEEEeccCCCChHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCC
Q 011287 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQITSKG-----------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPE 174 (489)
Q Consensus 106 nIv~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~~-----------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpe 174 (489)
||+++++++.+....++||||+.+++|.+++.+.. .+++..+..++.|++.||.|||++||+||||||+
T Consensus 80 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~ 159 (296)
T cd05051 80 NIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATR 159 (296)
T ss_pred CEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence 99999999999999999999999999999998765 6899999999999999999999999999999999
Q ss_pred CeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh--CC
Q 011287 175 NLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS--GT 252 (489)
Q Consensus 175 NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt--G~ 252 (489)
||+++.++.++|+|||++........ ........++..|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 231 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDY--------YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCRE 231 (296)
T ss_pred ceeecCCCceEEccccceeecccCcc--------eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCC
Confidence 99999999999999999875433211 112224456789999999988889999999999999999998 78
Q ss_pred CCCCCCCHHHHHHHHHhc--------CCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 253 SPFKDTSEWLIFQRIIAR--------DIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 253 ~PF~~~~~~~~~~~i~~~--------~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.||...+....+..+... ....|..++.++.+||.+||+.||++||++
T Consensus 232 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~ 287 (296)
T cd05051 232 QPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTF 287 (296)
T ss_pred CCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCH
Confidence 899887776666655432 123455678999999999999999999998
No 277
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.6e-40 Score=324.92 Aligned_cols=250 Identities=22% Similarity=0.357 Sum_probs=208.4
Q ss_pred eEEeeEEeeeCceEEEEEEEcC---CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE----
Q 011287 47 FELGKIYGVGSYSKVVRAKKID---TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS---- 119 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~---tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---- 119 (489)
|.+++.||+|+||.||.|.... ++..||+|.+...... ......+.+|+..++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 6789999999999999999765 3488999998754322 3344567889999999999999999998765443
Q ss_pred --EEEEEeccCCCChHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccC
Q 011287 120 --LYMALESCEGGELFDQITSK------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGS 191 (489)
Q Consensus 120 --lylV~E~~~gg~L~~~l~~~------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~ 191 (489)
.++||||+++|+|..++... ..+++..+..++.|++.||.|||+.|++||||||+||++++++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 79999999999999888542 3589999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc
Q 011287 192 VKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR 270 (489)
Q Consensus 192 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~ 270 (489)
++.+...... .......++..|+|||.+.+..++.++|||||||++|+|++ |.+||.+.+..+.+..+...
T Consensus 160 ~~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 231 (273)
T cd05035 160 SKKIYSGDYY--------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG 231 (273)
T ss_pred eeeccccccc--------cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 9865432211 11112234678999999988889999999999999999999 99999988887777776654
Q ss_pred -CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 271 -DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 271 -~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
....|..++.++.+++.+||+.||++||++ .+++.
T Consensus 232 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~e~~~ 267 (273)
T cd05035 232 NRLKQPEDCLDELYDLMYSCWRADPKDRPTF-----TKLRE 267 (273)
T ss_pred CCCCCCcCCCHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence 455778899999999999999999999998 55653
No 278
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.2e-40 Score=332.28 Aligned_cols=264 Identities=28% Similarity=0.451 Sum_probs=211.5
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC------
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT------ 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 117 (489)
.++|++.+.||+|+||.||+|+++.+++.||+|.+...... ........+|+.+++.++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK-DGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC-CCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 68999999999999999999999999999999998654322 22223456799999999999999999887443
Q ss_pred --CEEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 118 --FSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 118 --~~lylV~E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
..+|+||||+.+ +|...+.. ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++..
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 357999999975 77777765 35799999999999999999999999999999999999999999999999999986
Q ss_pred cCCccccccCC-CCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC
Q 011287 195 MQDSRITVLPN-AASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI 272 (489)
Q Consensus 195 ~~~~~~~~~~~-~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~ 272 (489)
........... ...........|++.|+|||.+.+. .++.++|||||||++|+|++|++||.+.+.......+.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~ 244 (311)
T cd07866 165 YDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCG 244 (311)
T ss_pred ccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence 54332111100 0011223455789999999988654 578999999999999999999999998887766555443110
Q ss_pred -----------------------CCC-------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 273 -----------------------RFP-------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 273 -----------------------~~p-------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
..| ..+++.+.++|.+||+.||.+||++ .+++.||||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~-----~ell~~~~f 311 (311)
T cd07866 245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTA-----SDALEHPYF 311 (311)
T ss_pred CCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCH-----HHHhcCCCC
Confidence 001 1245788999999999999999998 899999998
No 279
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9.9e-41 Score=345.81 Aligned_cols=250 Identities=22% Similarity=0.362 Sum_probs=206.8
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCC-----CcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDT-----GTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQ 115 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~t-----g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~ 115 (489)
+..++|++++.||+|+||.||+|++... +..||||++.... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 3467899999999999999999987433 4579999986542 2334456888999999996 999999999999
Q ss_pred cCCEEEEEEeccCCCChHHHHHhC--------------------------------------------------------
Q 011287 116 DTFSLYMALESCEGGELFDQITSK-------------------------------------------------------- 139 (489)
Q Consensus 116 ~~~~lylV~E~~~gg~L~~~l~~~-------------------------------------------------------- 139 (489)
+...+|+|||||++|+|.+++.+.
T Consensus 112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 999999999999999999988642
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeC
Q 011287 140 ----------------------------------------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLT 179 (489)
Q Consensus 140 ----------------------------------------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~ 179 (489)
..+++..+..++.||+.||.|||+.||+||||||+|||++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~ 271 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe
Confidence 1377888899999999999999999999999999999999
Q ss_pred CCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCC
Q 011287 180 ADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDT 258 (489)
Q Consensus 180 ~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~ 258 (489)
.++.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|+|++ |..||...
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~ 343 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSN--------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM 343 (400)
T ss_pred CCCEEEEEeCCcceecccccc--------ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence 999999999999986533211 112223457788999999999889999999999999999997 99999876
Q ss_pred CHHHHHHHHHhc--CCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 259 SEWLIFQRIIAR--DIRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 259 ~~~~~~~~i~~~--~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
.....+...... ....|..++.++.+++.+||+.||++||++.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 388 (400)
T cd05105 344 IVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFL 388 (400)
T ss_pred chhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHH
Confidence 544433333333 3445677899999999999999999999983
No 280
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.3e-40 Score=325.88 Aligned_cols=245 Identities=21% Similarity=0.362 Sum_probs=204.3
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCc--EEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC------C
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGT--VYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT------F 118 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~--~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~ 118 (489)
|.+++.||+|+||.||+|++..++. .||+|.+..... .......+..|..+++.++||||+++++.+... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 4578999999999999999987775 699998876432 334456677899999999999999999876421 2
Q ss_pred EEEEEEeccCCCChHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCc
Q 011287 119 SLYMALESCEGGELFDQITS------KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~------~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a 192 (489)
..+++|||+.+|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 47899999999999988742 134899999999999999999999999999999999999999999999999999
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD 271 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~ 271 (489)
+.+...... .......+++.|+|||.+.+..++.++|+|||||++|+|++ |++||.+.........+....
T Consensus 160 ~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 231 (272)
T cd05075 160 KKIYNGDYY--------RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN 231 (272)
T ss_pred cccCcccce--------ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 875432210 01122346678999999999999999999999999999999 899999888877777766544
Q ss_pred -CCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 272 -IRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 272 -~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
..++..++..+.++|.+||+.||.+||++
T Consensus 232 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 261 (272)
T cd05075 232 RLKQPPDCLDGLYSLMSSCWLLNPKDRPSF 261 (272)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCcCH
Confidence 35667789999999999999999999998
No 281
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-40 Score=331.84 Aligned_cols=249 Identities=24% Similarity=0.369 Sum_probs=208.4
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcC-------CCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKID-------TGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTF 114 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~-------tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~ 114 (489)
..++|.+++.||+|+||.||+|++.. ++..+|+|.+.... .+.....+.+|+.+++.+ +||||+++++++
T Consensus 16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (307)
T cd05098 16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 93 (307)
T ss_pred ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 34789999999999999999998643 33579999987542 233345577799999999 799999999999
Q ss_pred EcCCEEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeee
Q 011287 115 QDTFSLYMALESCEGGELFDQITSKG----------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLL 178 (489)
Q Consensus 115 ~~~~~lylV~E~~~gg~L~~~l~~~~----------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl 178 (489)
.+...+|+||||+.+|+|.+++...+ .++...+..++.|++.||+|||++|++||||||+||++
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill 173 (307)
T cd05098 94 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 173 (307)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE
Confidence 99999999999999999999997642 47889999999999999999999999999999999999
Q ss_pred CCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCC
Q 011287 179 TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKD 257 (489)
Q Consensus 179 ~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~ 257 (489)
+.++.++|+|||++......... .......++..|+|||++.+..++.++|+|||||++|+|++ |..||.+
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~ 245 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYY--------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 245 (307)
T ss_pred cCCCcEEECCCcccccccccchh--------hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 99999999999998755321100 00111234568999999998889999999999999999998 9999988
Q ss_pred CCHHHHHHHHHhcC-CCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 258 TSEWLIFQRIIARD-IRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 258 ~~~~~~~~~i~~~~-~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
.+....+..+.... ..+|..++.++.+||.+||..+|++||++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 290 (307)
T cd05098 246 VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFK 290 (307)
T ss_pred CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHH
Confidence 87777766665543 356778899999999999999999999983
No 282
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.9e-40 Score=328.78 Aligned_cols=256 Identities=23% Similarity=0.371 Sum_probs=214.5
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCC-----CcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEE
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDT-----GTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFT 113 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~t-----g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 113 (489)
-.+..++|++.+.||+|+||.||+|..... ...+|+|.+..... ......+.+|+.+++++ +||||++++++
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 84 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGV 84 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 345678999999999999999999998644 37899999875422 22345577899999999 89999999999
Q ss_pred EEcCCEEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCee
Q 011287 114 FQDTFSLYMALESCEGGELFDQITSK----------------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLL 177 (489)
Q Consensus 114 ~~~~~~lylV~E~~~gg~L~~~l~~~----------------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNIL 177 (489)
+.+...+|++|||+.+|+|..++... +.+++..+..++.||+.||.|||+.||+||||||+|||
T Consensus 85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil 164 (293)
T cd05053 85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL 164 (293)
T ss_pred EcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEE
Confidence 99999999999999999999998642 45899999999999999999999999999999999999
Q ss_pred eCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCC
Q 011287 178 LTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256 (489)
Q Consensus 178 l~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~ 256 (489)
++.++.++|+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 236 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYY--------RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 236 (293)
T ss_pred EcCCCeEEeCccccccccccccce--------eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCC
Confidence 999999999999999865432210 01111234567999999998899999999999999999997 999999
Q ss_pred CCCHHHHHHHHHhcC-CCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 257 DTSEWLIFQRIIARD-IRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 257 ~~~~~~~~~~i~~~~-~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
+.+..+.++.+.... ...|...+..+.+|+.+||..||++|||+ .++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~eil~ 286 (293)
T cd05053 237 GIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTF-----KQLVE 286 (293)
T ss_pred CCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCH-----HHHHH
Confidence 888777777665543 35667789999999999999999999999 56654
No 283
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.8e-40 Score=331.29 Aligned_cols=251 Identities=23% Similarity=0.388 Sum_probs=211.1
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEE-----cCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEE
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKK-----IDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFT 113 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~-----~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 113 (489)
-++..++|.+.+.||+|+||.||+|.+ ..++..||+|++.+.. .......+.+|+.+++++ +||||+++++.
T Consensus 30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 107 (302)
T cd05055 30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGA 107 (302)
T ss_pred ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEE
Confidence 457778999999999999999999986 3356789999986542 223345678899999999 79999999999
Q ss_pred EEcCCEEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccC
Q 011287 114 FQDTFSLYMALESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGS 191 (489)
Q Consensus 114 ~~~~~~lylV~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~ 191 (489)
+.....+|+||||+.+|+|.+++.... .+++.++..++.|++.||.|||++||+|+||||+|||++.++.++|+|||+
T Consensus 108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 108 CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999999997643 389999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc
Q 011287 192 VKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR 270 (489)
Q Consensus 192 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~ 270 (489)
++.+...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+......+.+....
T Consensus 188 ~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~ 259 (302)
T cd05055 188 ARDIMNDSNY--------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE 259 (302)
T ss_pred cccccCCCce--------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc
Confidence 8765332100 01123346788999999999899999999999999999998 99999887766655555443
Q ss_pred C--CCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 271 D--IRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 271 ~--~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
. ...|...++++.+|+.+||+.+|++||++
T Consensus 260 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~ 291 (302)
T cd05055 260 GYRMAQPEHAPAEIYDIMKTCWDADPLKRPTF 291 (302)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence 3 23456789999999999999999999998
No 284
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.3e-40 Score=315.83 Aligned_cols=249 Identities=32% Similarity=0.593 Sum_probs=216.6
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
||.+.+.||+|++|.||+|.+..+++.|++|++..... .....+.+|..+++.++||||+++++.+......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 68999999999999999999998999999999976532 345677889999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 126 SCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 126 ~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
|+++++|.+++... ..+++..+..++.|++.||.+||++|++||||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~----- 152 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK----- 152 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc-----
Confidence 99999999999876 679999999999999999999999999999999999999999999999999987654321
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh-cCCCCCCC--CCHH
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA-RDIRFPNY--FSDA 281 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~-~~~~~p~~--~~~~ 281 (489)
......|+..|+|||.+.+..++.++|+|||||++|+|++|+.||...+.......+.. ....++.. ++..
T Consensus 153 ------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (253)
T cd05122 153 ------ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDE 226 (253)
T ss_pred ------cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHH
Confidence 03456789999999999988899999999999999999999999988755444333332 22233333 4899
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCHHHHhcCCC
Q 011287 282 ARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPF 313 (489)
Q Consensus 282 ~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpf 313 (489)
+.++|.+||+.||++||++ .+++.|||
T Consensus 227 ~~~~i~~~l~~~p~~R~t~-----~~~l~~~~ 253 (253)
T cd05122 227 FKDFLKKCLQKNPEKRPTA-----EQLLKHPF 253 (253)
T ss_pred HHHHHHHHccCChhhCCCH-----HHHhcCCC
Confidence 9999999999999999999 89999998
No 285
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.5e-40 Score=323.68 Aligned_cols=243 Identities=21% Similarity=0.334 Sum_probs=207.3
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
..++|++.+.||+|+||.||+|.+. ++..+|+|.+...... ...+.+|+.++++++||||+++++++.+ ...|+
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~l 77 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYI 77 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEE
Confidence 4578999999999999999999875 5677999998764332 2457789999999999999999998854 56899
Q ss_pred EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 123 ALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
+|||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++..+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 99999999999999763 3589999999999999999999999999999999999999999999999999976543211
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYF 278 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~ 278 (489)
.......++..|+|||.+.+..++.++|+|||||++|+|++ |.+||.+.+.......+... ....|...
T Consensus 158 ---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (260)
T cd05070 158 ---------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDC 228 (260)
T ss_pred ---------ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcC
Confidence 11112345668999999988889999999999999999999 99999988887777776654 44567778
Q ss_pred CHHHHHHHHHhhccCCCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
+.++.+|+.+||+.||++|||+
T Consensus 229 ~~~~~~li~~~l~~~p~~Rpt~ 250 (260)
T cd05070 229 PISLHELMLQCWKKDPEERPTF 250 (260)
T ss_pred CHHHHHHHHHHcccCcccCcCH
Confidence 9999999999999999999998
No 286
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.4e-40 Score=324.77 Aligned_cols=253 Identities=18% Similarity=0.304 Sum_probs=210.5
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCc----EEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGT----VYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD 116 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~----~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 116 (489)
.++.++|++.+.||+|+||+||+|++..+|+ .||+|++.... .......+.+|..+++.++||||+++++++..
T Consensus 3 ~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (279)
T cd05109 3 ILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT 80 (279)
T ss_pred ccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC
Confidence 3567899999999999999999999877776 48999986542 23334567789999999999999999998876
Q ss_pred CCEEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCcccc
Q 011287 117 TFSLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPM 195 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~ 195 (489)
. ..++++||+++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+
T Consensus 81 ~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 S-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred C-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 4 578999999999999999764 56999999999999999999999999999999999999999999999999999866
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCC
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIR 273 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~ 273 (489)
...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+... ...
T Consensus 160 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~ 231 (279)
T cd05109 160 DIDETE--------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLP 231 (279)
T ss_pred ccccce--------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC
Confidence 432211 00111234678999999998889999999999999999998 99999887766655555443 334
Q ss_pred CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHh
Q 011287 274 FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLK 309 (489)
Q Consensus 274 ~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~ 309 (489)
.+..++.++.++|.+||+.||++||++ .+++
T Consensus 232 ~~~~~~~~~~~li~~~l~~dp~~Rp~~-----~~l~ 262 (279)
T cd05109 232 QPPICTIDVYMIMVKCWMIDSECRPRF-----RELV 262 (279)
T ss_pred CCccCCHHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence 566789999999999999999999999 5565
No 287
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.5e-40 Score=323.13 Aligned_cols=243 Identities=20% Similarity=0.340 Sum_probs=205.9
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
..++|++.+.||+|+||.||+|++..+ ..||+|.+.+.... ...+.+|+.+++.++||||+++++.+.+ ...|+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~l 77 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 77 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC----HHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEE
Confidence 357899999999999999999998665 46999998764322 2456779999999999999999998754 56899
Q ss_pred EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 123 ALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
||||+++|+|.+++.+. ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||.+..+.....
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 99999999999999763 3589999999999999999999999999999999999999999999999999976543221
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYF 278 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~ 278 (489)
.......++..|+|||++.+..++.++|+|||||++|+|++ |.+||.+.........+... ....+..+
T Consensus 158 ---------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (262)
T cd05071 158 ---------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 228 (262)
T ss_pred ---------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCcccc
Confidence 11123346778999999988889999999999999999999 99999988877777666543 23445678
Q ss_pred CHHHHHHHHHhhccCCCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
+..+.+||.+||+.||++||++
T Consensus 229 ~~~l~~li~~~l~~~p~~Rp~~ 250 (262)
T cd05071 229 PESLHDLMCQCWRKEPEERPTF 250 (262)
T ss_pred CHHHHHHHHHHccCCcccCCCH
Confidence 9999999999999999999998
No 288
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.7e-40 Score=321.21 Aligned_cols=239 Identities=23% Similarity=0.416 Sum_probs=204.9
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEE-EcCCEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTF-QDTFSL 120 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-~~~~~l 120 (489)
+..++|++.+.||+|+||.||+|.. .|..||+|.+... .....+.+|+.++++++|+|++++++++ .+...+
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 75 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCce
Confidence 3567999999999999999999976 4788999998543 2234577899999999999999999865 456679
Q ss_pred EEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 121 YMALESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
|+||||+++++|.+++.+.+ .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999999997653 3889999999999999999999999999999999999999999999999998754321
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPN 276 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~ 276 (489)
.....++..|+|||++.+..++.++|||||||++|+|++ |++||...+.......+... ....++
T Consensus 156 -------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T cd05082 156 -------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD 222 (256)
T ss_pred -------------CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCC
Confidence 112234568999999998889999999999999999997 99999988777776666544 334567
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.+++.+.++|.+||+.||++||++
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rpt~ 246 (256)
T cd05082 223 GCPPVVYDVMKQCWHLDAATRPSF 246 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCH
Confidence 789999999999999999999998
No 289
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=5.7e-40 Score=329.37 Aligned_cols=251 Identities=30% Similarity=0.410 Sum_probs=214.7
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEec
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALES 126 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~ 126 (489)
|...+.||+|+||.||+|++..+|..||+|++.............+..|+.+++.++|||++++++++.+....|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 77788899999999999999999999999999766544445556677899999999999999999999999999999999
Q ss_pred cCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 127 CEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 127 ~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
+. |+|.+.+.. ...+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++....
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~--------- 172 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS--------- 172 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC---------
Confidence 96 478777765 4568999999999999999999999999999999999999999999999999976321
Q ss_pred CCCCCCccceecCCcCCChhhhc---CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC--CCCCCCH
Q 011287 206 AASDDKACTFVGTAAYVPPEVLN---SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR--FPNYFSD 280 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~---~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~--~p~~~~~ 280 (489)
......|+..|+|||++. ...++.++|+|||||++|+|++|.+||...+.......+...... ....++.
T Consensus 173 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
T cd06633 173 -----PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTD 247 (313)
T ss_pred -----CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCH
Confidence 122457899999999984 456788999999999999999999999887766655555443221 2245788
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.+++||.+||+.+|.+||++ .+++.||||+..
T Consensus 248 ~l~~li~~~l~~~P~~Rp~~-----~~~l~~~~~~~~ 279 (313)
T cd06633 248 SFRGFVDYCLQKIPQERPAS-----AELLRHDFVRRD 279 (313)
T ss_pred HHHHHHHHHccCChhhCcCH-----HHHhcCcccCCC
Confidence 89999999999999999998 899999999853
No 290
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.4e-40 Score=336.34 Aligned_cols=253 Identities=28% Similarity=0.468 Sum_probs=209.6
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC------C
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT------F 118 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~ 118 (489)
++|.+.+.||+|+||.||+|++..+|+.||+|++.+.... +.....+.+|+.+++.++||||++++++|... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS-EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc-ccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 6899999999999999999999999999999998764322 22334567899999999999999999998754 3
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
..|+|+||+.+ +|..++. ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++....
T Consensus 94 ~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~- 169 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA- 169 (342)
T ss_pred eEEEEeccccc-CHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC-
Confidence 46999999964 7776653 3699999999999999999999999999999999999999999999999999875321
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC------
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD------ 271 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~------ 271 (489)
......++..|+|||++.+ ..++.++|+|||||++|+|++|+.||.+.+....+..+....
T Consensus 170 ------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07879 170 ------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPE 237 (342)
T ss_pred ------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 1224578899999999876 458889999999999999999999999877655544433210
Q ss_pred -----------------CCCC--------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCc
Q 011287 272 -----------------IRFP--------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDW 319 (489)
Q Consensus 272 -----------------~~~p--------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~ 319 (489)
..++ +..++++.+||++||+.||++||++ .+++.||||+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~-----~e~l~h~~f~~~~~ 305 (342)
T cd07879 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTA-----TEALEHPYFDSFRD 305 (342)
T ss_pred HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCH-----HHHhcCcchhhccc
Confidence 0111 2367889999999999999999998 89999999998653
No 291
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.8e-40 Score=324.65 Aligned_cols=250 Identities=28% Similarity=0.467 Sum_probs=209.6
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC---CCCCccEEEEEEEcCCE----
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL---DHPGVVRLFFTFQDTFS---- 119 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l---~hpnIv~l~~~~~~~~~---- 119 (489)
|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.+ +||||+++++++.+...
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 7899999999999999999998999999999975433 222234455677777665 69999999999988776
Q ss_pred -EEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 120 -LYMALESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 120 -lylV~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
+|++|||+.+ +|.+++.+.. .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..+.
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 9999999975 8988887643 59999999999999999999999999999999999999999999999999987653
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-----
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD----- 271 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~----- 271 (489)
... ......++..|+|||++.+..++.++|+|||||++|+|++|.+||.+.+..+.+.++....
T Consensus 159 ~~~-----------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07838 159 FEM-----------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSE 227 (287)
T ss_pred CCc-----------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCCh
Confidence 321 1123457889999999998889999999999999999999999999988877777665421
Q ss_pred CC-----------CC-----------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 IR-----------FP-----------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 ~~-----------~p-----------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.. ++ ..+++.+.++|.+||+.||++||++ .+++.||||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~-----~~il~~~~~ 287 (287)
T cd07838 228 EEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISA-----FEALQHPYF 287 (287)
T ss_pred HhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCH-----HHHhcCcCC
Confidence 00 01 1246788999999999999999998 899999998
No 292
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.7e-40 Score=336.42 Aligned_cols=252 Identities=26% Similarity=0.423 Sum_probs=208.8
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC------
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT------ 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 117 (489)
.++|.+.+.||+|+||.||+|.+..+|+.||+|++.+.... ......+.+|+.++++++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh-hHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 48899999999999999999999999999999998764322 22334566799999999999999999988643
Q ss_pred CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 118 FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
...|++++++ +++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+||+++.+|.++|+|||++.....
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~ 172 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 172 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc
Confidence 3478888887 6799887765 4699999999999999999999999999999999999999999999999999875321
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC----
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI---- 272 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~---- 272 (489)
......|+..|+|||.+.+ ..++.++|+|||||++|+|++|++||.+.+.......+.....
T Consensus 173 -------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (345)
T cd07877 173 -------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 239 (345)
T ss_pred -------------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 1224578899999999866 5688899999999999999999999987766554444322110
Q ss_pred -------------------CC--------CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 273 -------------------RF--------PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 273 -------------------~~--------p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.. ....++++.+||.+||+.||.+||++ .+++.||||..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~-----~e~l~h~~f~~ 305 (345)
T cd07877 240 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA-----AQALAHAYFAQ 305 (345)
T ss_pred HHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCH-----HHHhcChhhhh
Confidence 11 11357889999999999999999998 89999999985
No 293
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3.7e-40 Score=322.47 Aligned_cols=249 Identities=20% Similarity=0.332 Sum_probs=209.2
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCc---EEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGT---VYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~---~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
..++|++++.||+|+||.||+|+++.++. .+|+|.+..... ......+.+|..+++.++||||+++++++.+...
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 79 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKP 79 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 35789999999999999999999875543 799999865432 2334567889999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 120 LYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.|+||||+++++|.+++.+. +.+++.++..++.|++.||.|||++|++||||||+|||++.++.++|+|||++..+...
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999999999875 46899999999999999999999999999999999999999999999999999865432
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPN 276 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~ 276 (489)
... ........++..|+|||.+.+..++.++|+|||||++|++++ |..||...+..+....+... ....+.
T Consensus 160 ~~~-------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (267)
T cd05066 160 PEA-------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPM 232 (267)
T ss_pred cce-------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCC
Confidence 100 001112233567999999998889999999999999999886 99999988877777666654 233445
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.+++.+.+++.+||+.+|.+||++
T Consensus 233 ~~~~~~~~li~~~l~~~p~~Rp~~ 256 (267)
T cd05066 233 DCPAALHQLMLDCWQKDRNERPKF 256 (267)
T ss_pred CCCHHHHHHHHHHcccCchhCCCH
Confidence 678999999999999999999998
No 294
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-43 Score=380.22 Aligned_cols=258 Identities=32% Similarity=0.574 Sum_probs=226.7
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+++-+-.||.|.||.||.|.+.+||...|+|-+.-.... ......+.+|..+|..++|||+|++|++-.+.+.+|+.||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 567778899999999999999999999999988654333 4455678889999999999999999999999999999999
Q ss_pred ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 126 SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
||+||+|.+.+...+..+|...+.|..|++.|+.|||+.|||||||||+||+++.+|-+|++|||+|..+.++..+.
T Consensus 1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~--- 1391 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM--- 1391 (1509)
T ss_pred HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcC---
Confidence 99999999999988889999999999999999999999999999999999999999999999999999887653221
Q ss_pred CCCCCCccceecCCcCCChhhhcC---CCCCCCCcchhhhHHHHHHhhCCCCCCC-CCHHHHHHHHHh-cCCCCCCCCCH
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNS---SPATFGNDLWALGCTLYQMLSGTSPFKD-TSEWLIFQRIIA-RDIRFPNYFSD 280 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~---~~~~~~sDiwSLG~ilyelltG~~PF~~-~~~~~~~~~i~~-~~~~~p~~~~~ 280 (489)
.......+||+.|||||++.+ .+...++|||||||++.||+||+.||.. .++..++.+.-. ..+++|..+++
T Consensus 1392 ---~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~ 1468 (1509)
T KOG4645|consen 1392 ---PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSS 1468 (1509)
T ss_pred ---CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhH
Confidence 233457799999999999965 4467899999999999999999999975 456666655544 45789999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
+.+|||++||+.||++|.++ .+|++|.|=+
T Consensus 1469 ~g~dFle~Cl~~dP~~Rw~~-----~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1469 EGRDFLEHCLEQDPKMRWTA-----SQLLEHAFGK 1498 (1509)
T ss_pred hHHHHHHHHHhcCchhhhHH-----HHHHHhhccc
Confidence 99999999999999999988 7899999854
No 295
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=7.4e-41 Score=337.91 Aligned_cols=258 Identities=22% Similarity=0.336 Sum_probs=205.9
Q ss_pred eEEeee--CceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccC
Q 011287 51 KIYGVG--SYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCE 128 (489)
Q Consensus 51 ~~LG~G--~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~ 128 (489)
..||+| +||+||+|++..+|+.||+|++....... .....+.+|+.+++.++||||++++++|......|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 356666 99999999999999999999987653332 344678889999999999999999999999999999999999
Q ss_pred CCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCC
Q 011287 129 GGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNA 206 (489)
Q Consensus 129 gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~ 206 (489)
+++|.+++.+. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++++||+.+...........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~--- 159 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK--- 159 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc---
Confidence 99999998864 3489999999999999999999999999999999999999999999999986543322110000
Q ss_pred CCCCCccceecCCcCCChhhhcCC--CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC-----------
Q 011287 207 ASDDKACTFVGTAAYVPPEVLNSS--PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR----------- 273 (489)
Q Consensus 207 ~~~~~~~~~~gt~~Y~aPE~l~~~--~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~----------- 273 (489)
..........++..|+|||++.+. .++.++|+|||||++|+|++|.+||.+.........+......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCE 239 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchh
Confidence 000011122456779999999764 4788999999999999999999999887655544443322111
Q ss_pred ------------------------------------CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 274 ------------------------------------FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 274 ------------------------------------~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.+..+++.+.+||++||+.||++|||+ .++++||||.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta-----~e~l~~~~~~~~ 314 (328)
T cd08226 240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSA-----SSLLSHAFFKQV 314 (328)
T ss_pred hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCH-----HHHhhCHHHHHH
Confidence 122356789999999999999999999 899999999754
No 296
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.5e-40 Score=319.21 Aligned_cols=251 Identities=28% Similarity=0.494 Sum_probs=220.7
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
+|++.+.||+|+||.||+|++..+++.||+|.+........ ....+.+|..+++.++||||+++++++.+....|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQK-EREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHH-HHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 68999999999999999999999999999999976554433 34456679999999999999999999999999999999
Q ss_pred ccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 126 SCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 126 ~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
|+++++|.+++.+ ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 9999999998876 356899999999999999999999999999999999999999999999999998765432
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCH
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-RFPNYFSD 280 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~~p~~~~~ 280 (489)
......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...+.......+..... ..+..++.
T Consensus 157 ---------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (256)
T cd08530 157 ---------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQ 227 (256)
T ss_pred ---------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCH
Confidence 11234578899999999998899999999999999999999999999887776666655443 45667899
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
+++++|.+||+.+|++||++ .++++||+.
T Consensus 228 ~~~~li~~~l~~~p~~Rp~~-----~~~l~~p~~ 256 (256)
T cd08530 228 DLQNFIRSMLQVKPKLRPNC-----DKILASPAV 256 (256)
T ss_pred HHHHHHHHHcCCCcccCCCH-----HHHhcCCCC
Confidence 99999999999999999998 899999974
No 297
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.4e-40 Score=334.94 Aligned_cols=267 Identities=24% Similarity=0.365 Sum_probs=216.2
Q ss_pred CCeE-EeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchh-----------HHHHHHHHHHHHHhCCCCCccEEEE
Q 011287 45 QDFE-LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKEN-----------KTAYVKLERIVLDQLDHPGVVRLFF 112 (489)
Q Consensus 45 ~dy~-~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~-----------~~~~~~~E~~il~~l~hpnIv~l~~ 112 (489)
++|. +.+.||.|+||+||+|.+..+++.||+|++......... ....+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4665 567899999999999999999999999998765333211 1123667999999999999999999
Q ss_pred EEEcCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCc
Q 011287 113 TFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 113 ~~~~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a 192 (489)
++......|+||||+. |+|.+++.....+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||.+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccce
Confidence 9999999999999997 599999988888999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccccccCCC----CCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHH
Q 011287 193 KPMQDSRITVLPNA----ASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRI 267 (489)
Q Consensus 193 ~~~~~~~~~~~~~~----~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i 267 (489)
..+........... ..........++..|+|||.+.+. .++.++|+|||||++|+|++|.+||.+.+....+..+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i 246 (335)
T PTZ00024 167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRI 246 (335)
T ss_pred eecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 86653221100000 011122234678899999998764 4688999999999999999999999998887766655
Q ss_pred HhcC-----CCC-----------------------CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 268 IARD-----IRF-----------------------PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 268 ~~~~-----~~~-----------------------p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.... ..+ ....+.++.++|.+||+.||++||++ ++++.||||++-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~-----~~~l~~~~~~~~ 319 (335)
T PTZ00024 247 FELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISA-----KEALKHEYFKSD 319 (335)
T ss_pred HHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCH-----HHHhcCcccCCC
Confidence 4310 000 12357889999999999999999998 899999999853
No 298
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.5e-40 Score=320.14 Aligned_cols=245 Identities=22% Similarity=0.355 Sum_probs=211.0
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
+..++|++.+.||+|+||.||+|.+. .++.||+|.+..... ....+.+|+.+++.++||||+++++++.+....|
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence 45689999999999999999999975 468899999875432 2345778999999999999999999999989999
Q ss_pred EEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 122 MALESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+||||+++++|.+++.... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..+....
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 9999999999999997653 68999999999999999999999999999999999999999999999999988654321
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNY 277 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~ 277 (489)
. .......++..|+|||.+.+..++.++|+|||||++|+|++ |+.||.+.+.....+.+... ....|..
T Consensus 158 ~---------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 228 (261)
T cd05034 158 Y---------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPN 228 (261)
T ss_pred h---------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 0 01112234568999999998889999999999999999998 99999998887777777654 3345667
Q ss_pred CCHHHHHHHHHhhccCCCCCCCC
Q 011287 278 FSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 278 ~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.+.++.+++.+||+.+|.+||++
T Consensus 229 ~~~~~~~~i~~~l~~~p~~Rp~~ 251 (261)
T cd05034 229 CPEELYDLMLQCWDKDPEERPTF 251 (261)
T ss_pred CCHHHHHHHHHHcccCcccCCCH
Confidence 89999999999999999999998
No 299
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.8e-40 Score=319.63 Aligned_cols=240 Identities=21% Similarity=0.347 Sum_probs=202.6
Q ss_pred eEEeeeCceEEEEEEEcCCC---cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEecc
Q 011287 51 KIYGVGSYSKVVRAKKIDTG---TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESC 127 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg---~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~ 127 (489)
+.||+|+||.||+|....++ ..||+|.+...... .....+..|+.+++.++||||+++++++.. ...++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeC
Confidence 47999999999999876554 79999998765433 334567779999999999999999998764 4689999999
Q ss_pred CCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCC
Q 011287 128 EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207 (489)
Q Consensus 128 ~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~ 207 (489)
++|+|.+++.+.+.+++..+..++.|++.||+|||..|++||||||+|||++.++.++|+|||+++.+......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~------ 151 (257)
T cd05060 78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY------ 151 (257)
T ss_pred CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc------
Confidence 99999999998888999999999999999999999999999999999999999999999999998865432110
Q ss_pred CCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC-CCCCCCCCHHHHHH
Q 011287 208 SDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD-IRFPNYFSDAARDL 285 (489)
Q Consensus 208 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~L 285 (489)
........++..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+.......+.... ...|..++..++++
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 230 (257)
T cd05060 152 -YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSI 230 (257)
T ss_pred -cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHH
Confidence 000111124567999999998889999999999999999998 999999888777666665543 35677889999999
Q ss_pred HHHhhccCCCCCCCC
Q 011287 286 IDRLLDVDPSGRPGA 300 (489)
Q Consensus 286 i~~~L~~dP~~R~t~ 300 (489)
|.+||+.||++||++
T Consensus 231 i~~cl~~~p~~Rp~~ 245 (257)
T cd05060 231 MLSCWKYRPEDRPTF 245 (257)
T ss_pred HHHHhcCChhhCcCH
Confidence 999999999999998
No 300
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.5e-42 Score=324.72 Aligned_cols=260 Identities=28% Similarity=0.414 Sum_probs=210.8
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCC----cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc-CC
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTG----TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD-TF 118 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg----~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~ 118 (489)
+..|++++.||+|+||.||+|..+.++ +.||||.++.+.. ........-+|+.+++.++|||++.|..+|-. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 467999999999999999999765553 3789999875522 22333445679999999999999999998876 78
Q ss_pred EEEEEEeccCCCChHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC----CCEEEeec
Q 011287 119 SLYMALESCEGGELFDQITSK-----GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD----GHIKIADF 189 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~-----~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~----g~ikL~DF 189 (489)
.+++++||++. ||++.|.-+ ..++...++.++.||+.|+.|||++=|+||||||.||||..+ |.|||+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 89999999987 999988643 358999999999999999999999999999999999999988 89999999
Q ss_pred cCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCH--------
Q 011287 190 GSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSE-------- 260 (489)
Q Consensus 190 G~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~-------- 260 (489)
|+|+.+.+.-.. .-.....|-|.+|+|||+|.+. .|+.+.|+||+|||+.||++-.+.|.+..+
T Consensus 181 GlaR~~~~plkp-------l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pf 253 (438)
T KOG0666|consen 181 GLARLFNNPLKP-------LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPF 253 (438)
T ss_pred cHHHHhhccccc-------cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCc
Confidence 999988654211 1122356889999999998775 599999999999999999999999986432
Q ss_pred -HHHHHHHHhcC-----------CCCCC--------------------------CCCHHHHHHHHHhhccCCCCCCCCCC
Q 011287 261 -WLIFQRIIARD-----------IRFPN--------------------------YFSDAARDLIDRLLDVDPSGRPGAGP 302 (489)
Q Consensus 261 -~~~~~~i~~~~-----------~~~p~--------------------------~~~~~~~~Li~~~L~~dP~~R~t~~~ 302 (489)
..++++|...- ...|+ .-++.+.+|+.+||..||.+|+|+
T Consensus 254 q~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta-- 331 (438)
T KOG0666|consen 254 QHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITA-- 331 (438)
T ss_pred hHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccH--
Confidence 34555565410 00111 125569999999999999999999
Q ss_pred CCHHHHhcCCCCCCC
Q 011287 303 GGYAVLKMHPFFKGI 317 (489)
Q Consensus 303 ~~~~~l~~hpff~~i 317 (489)
++.++|+||..-
T Consensus 332 ---~qAleh~yF~~d 343 (438)
T KOG0666|consen 332 ---EQALEHPYFTED 343 (438)
T ss_pred ---HHHhcccccccC
Confidence 889999999853
No 301
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.4e-40 Score=318.89 Aligned_cols=240 Identities=22% Similarity=0.393 Sum_probs=209.2
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
+..++|++.+.||.|+||.||+|.. .|+.||+|.+..... ....+.+|..+++.++|+||+++++++.+....|
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeE
Confidence 3567999999999999999999987 489999999875522 3456777999999999999999999999999999
Q ss_pred EEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 122 MALESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
+||||+++++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||.++......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 9999999999999998765 69999999999999999999999999999999999999999999999999998653211
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNY 277 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~ 277 (489)
....++..|+|||.+....++.++|+|||||++|+|++ |..||...+.......+... ....|..
T Consensus 157 -------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 223 (256)
T cd05039 157 -------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEG 223 (256)
T ss_pred -------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccC
Confidence 02234567999999988889999999999999999997 99999988877766655543 3456777
Q ss_pred CCHHHHHHHHHhhccCCCCCCCC
Q 011287 278 FSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 278 ~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
+++++.++|.+||+.+|++||++
T Consensus 224 ~~~~~~~li~~~l~~~p~~Rp~~ 246 (256)
T cd05039 224 CPPEVYKVMKDCWELDPAKRPTF 246 (256)
T ss_pred CCHHHHHHHHHHhccChhhCcCH
Confidence 89999999999999999999998
No 302
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.3e-40 Score=329.04 Aligned_cols=250 Identities=24% Similarity=0.382 Sum_probs=209.3
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcC-------CCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKID-------TGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFT 113 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~-------tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~ 113 (489)
+..++|.+++.||+|+||.||+|++.. ....+|+|.+.... .......+..|+.+++.+ +||||++++++
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 445789999999999999999998632 35679999986542 223345577799999999 69999999999
Q ss_pred EEcCCEEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCee
Q 011287 114 FQDTFSLYMALESCEGGELFDQITSK----------------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLL 177 (489)
Q Consensus 114 ~~~~~~lylV~E~~~gg~L~~~l~~~----------------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNIL 177 (489)
+.+...+|+||||+.+|+|.+++... ..++...+..++.||+.||.|||++||+||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 166 (314)
T cd05099 87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL 166 (314)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence 99999999999999999999999753 24888999999999999999999999999999999999
Q ss_pred eCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCC
Q 011287 178 LTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256 (489)
Q Consensus 178 l~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~ 256 (489)
++.++.+||+|||+++........ .......++..|+|||++.+..++.++|+|||||++|+|++ |..||.
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~ 238 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYY--------KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYP 238 (314)
T ss_pred EcCCCcEEEccccccccccccccc--------cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCC
Confidence 999999999999999865432110 01111234567999999998889999999999999999999 999999
Q ss_pred CCCHHHHHHHHHhcC-CCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 257 DTSEWLIFQRIIARD-IRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 257 ~~~~~~~~~~i~~~~-~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
+.+....+..+.... ..+|..++.++++||.+||..||++||++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 284 (314)
T cd05099 239 GIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFK 284 (314)
T ss_pred CCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence 888877777766543 356778899999999999999999999984
No 303
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.8e-40 Score=324.45 Aligned_cols=252 Identities=31% Similarity=0.497 Sum_probs=212.1
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC--CEEEEEE
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT--FSLYMAL 124 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~~lylV~ 124 (489)
|++.+.||+|+||.||+|++..+|+.||+|++.... ........+.+|+.+++.++|||++++++++.+. ..+|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 789999999999999999999999999999998764 2333345567799999999999999999999988 8999999
Q ss_pred eccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||+++ +|.+++.+. ..+++..+..++.||+.||+|||+.|++|+||+|+||++++++.++|+|||.+........
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~--- 155 (287)
T cd07840 80 EYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS--- 155 (287)
T ss_pred ccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc---
Confidence 99975 899888765 5799999999999999999999999999999999999999999999999999886543221
Q ss_pred CCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC----------
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI---------- 272 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~---------- 272 (489)
.......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+.......+.....
T Consensus 156 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 156 ------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred ------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccc
Confidence 11123356888999998765 4578999999999999999999999998887666555443100
Q ss_pred ---------------------CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 273 ---------------------RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 273 ---------------------~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.+...+++++.++|++||+.||.+||++ .+++.||||
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~-----~~~l~~~~~ 287 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISA-----DQALQHEYF 287 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCH-----HHHhhCcCC
Confidence 0111138899999999999999999998 899999998
No 304
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.8e-40 Score=319.63 Aligned_cols=243 Identities=22% Similarity=0.361 Sum_probs=206.5
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
..++|+++++||+|+||.||+|... +++.||+|.+..... ....+.+|+.++++++||||+++++++.+ ...|+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 77 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVTQ-EPIYI 77 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEcc-CCcEE
Confidence 4578999999999999999999864 578899999875432 23457789999999999999999998754 56899
Q ss_pred EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 123 ALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
+|||+.+++|.+++... ..+++..+..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++........
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 99999999999998754 4689999999999999999999999999999999999999999999999999876542211
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYF 278 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~ 278 (489)
.......++..|+|||++....++.++|+|||||++|+|++ |++||.+.+.....+.+... ....|...
T Consensus 158 ---------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (260)
T cd05067 158 ---------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNC 228 (260)
T ss_pred ---------ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCC
Confidence 11123345678999999998889999999999999999999 99999988877766665443 33556778
Q ss_pred CHHHHHHHHHhhccCCCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
+.++.++|.+||+.+|++||++
T Consensus 229 ~~~~~~li~~~l~~~p~~Rp~~ 250 (260)
T cd05067 229 PEELYELMRLCWKEKPEERPTF 250 (260)
T ss_pred CHHHHHHHHHHccCChhhCCCH
Confidence 8999999999999999999998
No 305
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.7e-40 Score=328.63 Aligned_cols=251 Identities=29% Similarity=0.473 Sum_probs=214.7
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEec
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALES 126 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~ 126 (489)
|.....||+|+||.||++....+|..||+|.+... .......+.+|+.+++.++||||+++++.|...+..|+||||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 44557899999999999999999999999987543 233455678899999999999999999999999999999999
Q ss_pred cCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCC
Q 011287 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNA 206 (489)
Q Consensus 127 ~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~ 206 (489)
+++++|.+++.. +.+++..++.++.|++.||+|||+.|++||||+|+||+++.+++++|+|||++.......
T Consensus 99 ~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~------- 170 (292)
T cd06657 99 LEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------- 170 (292)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-------
Confidence 999999987754 578999999999999999999999999999999999999999999999999876543211
Q ss_pred CCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC---CCCCCCCCHHHH
Q 011287 207 ASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD---IRFPNYFSDAAR 283 (489)
Q Consensus 207 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~---~~~p~~~~~~~~ 283 (489)
.......|++.|+|||.+.+..++.++|+||+||++|+|++|.+||.+.........+.... ......+++.+.
T Consensus 171 ---~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 247 (292)
T cd06657 171 ---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLK 247 (292)
T ss_pred ---ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHH
Confidence 11234578999999999988888999999999999999999999999887766555543322 223345789999
Q ss_pred HHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 284 DLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 284 ~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
+++.+||+.||.+||++ .+++.||||..
T Consensus 248 ~li~~~l~~~P~~R~~~-----~~ll~~~~~~~ 275 (292)
T cd06657 248 GFLDRLLVRDPAQRATA-----AELLKHPFLAK 275 (292)
T ss_pred HHHHHHHhCCcccCcCH-----HHHhcChHHhc
Confidence 99999999999999998 88999999975
No 306
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.3e-40 Score=336.60 Aligned_cols=252 Identities=28% Similarity=0.466 Sum_probs=212.9
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE----
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS---- 119 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~---- 119 (489)
.++|++.+.||+|+||.||+|++..+++.||+|++....... .....+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSA-IHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchh-hHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 578999999999999999999999999999999986543222 233456679999999999999999988876554
Q ss_pred --EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 120 --LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 120 --lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
+|+|+||+ +++|.+++.. +.+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++.....
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~ 170 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDD 170 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccc
Confidence 89999999 5699998876 5799999999999999999999999999999999999999999999999999875432
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC----
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI---- 272 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~---- 272 (489)
. .....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+....+..+.....
T Consensus 171 ~-------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 237 (343)
T cd07851 171 E-------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDE 237 (343)
T ss_pred c-------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence 1 224468889999999865 4678899999999999999999999998877766665543210
Q ss_pred ---------------------------CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 273 ---------------------------RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 273 ---------------------------~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.....+++++.+||.+||+.||.+|||+ .++++||||..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~-----~ell~h~~~~~ 303 (343)
T cd07851 238 ELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITA-----AEALAHPYLAE 303 (343)
T ss_pred HHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCH-----HHHhcCCCccc
Confidence 0112358899999999999999999998 89999999985
No 307
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.7e-40 Score=327.14 Aligned_cols=256 Identities=29% Similarity=0.431 Sum_probs=210.8
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC----
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF---- 118 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 118 (489)
..++|++.+.||+|+||.||+|.++.+|+.||+|++...... ......+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 468999999999999999999999999999999998754322 223345667999999999999999999987654
Q ss_pred ------EEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccC
Q 011287 119 ------SLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGS 191 (489)
Q Consensus 119 ------~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~ 191 (489)
.+|+|+||+++ +|...+... ..+++..++.++.||+.||.|||+.||+||||||+||++++++.+||+|||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccc
Confidence 79999999986 777777654 4699999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccccccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc
Q 011287 192 VKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270 (489)
Q Consensus 192 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~ 270 (489)
+..+..... .......++..|+|||.+.+. .++.++|||||||++|+|++|++||...+.......+...
T Consensus 163 ~~~~~~~~~---------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~ 233 (302)
T cd07864 163 ARLYNSEES---------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRL 233 (302)
T ss_pred cccccCCcc---------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 876543211 111223567889999988654 4788999999999999999999999887766555444331
Q ss_pred ---CC---------------------------CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 271 ---DI---------------------------RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 271 ---~~---------------------------~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
.. .....++..+.++|.+||+.||++||++ .+++.||||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~-----~~il~~~~~ 302 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTA-----EEALNSPWL 302 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCH-----HHHhcCCCC
Confidence 00 0112468999999999999999999998 899999997
No 308
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1e-39 Score=319.50 Aligned_cols=251 Identities=20% Similarity=0.333 Sum_probs=209.8
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCc---EEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGT---VYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~---~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
...+|++.+.||+|+||.||+|.++.+++ .||+|++.+.. .......+..|+.+++.++||||+++++++.+...
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 79 (269)
T cd05065 2 DVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRP 79 (269)
T ss_pred ChHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCc
Confidence 35789999999999999999999987665 69999986542 23345668889999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 120 LYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.++||||+++|+|.+++... +.+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 80 VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999999998764 56899999999999999999999999999999999999999999999999998765432
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPN 276 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~ 276 (489)
.... ..........+..|+|||.+.+..++.++|+|||||++|+|++ |..||...+.......+... ....|.
T Consensus 160 ~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~ 234 (269)
T cd05065 160 TSDP-----TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPM 234 (269)
T ss_pred cccc-----ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcc
Confidence 1100 0000001112457999999998889999999999999999886 99999988877777766543 234556
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.++..+.+++.+||+.+|++||++
T Consensus 235 ~~~~~~~~li~~~l~~~p~~Rp~~ 258 (269)
T cd05065 235 DCPTALHQLMLDCWQKDRNARPKF 258 (269)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCH
Confidence 789999999999999999999998
No 309
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=6.7e-40 Score=328.05 Aligned_cols=252 Identities=28% Similarity=0.399 Sum_probs=214.0
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
..|...+.||+|+||.||+|+++.++..+|+|.+.............+.+|+.+++.++|+|++++++++.+....|+||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 45888999999999999999999999999999987543334444456777999999999999999999999999999999
Q ss_pred eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 125 ESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 125 E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||+. |+|.+.+.. ...+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~------ 167 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ 167 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC------
Confidence 9997 588777654 45689999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCCCCCccceecCCcCCChhhhc---CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC-C-CCCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLN---SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI-R-FPNYF 278 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~-~-~p~~~ 278 (489)
.....|+..|+|||.+. ...++.++|||||||++|+|++|..||...+.......+..... . .+..+
T Consensus 168 --------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (308)
T cd06634 168 --------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW 239 (308)
T ss_pred --------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccc
Confidence 12456889999999974 34578899999999999999999999988766555544444332 2 23468
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
+..+.+||++||+.+|++||++ .++++||||..
T Consensus 240 ~~~~~~li~~cl~~~P~~Rp~~-----~~ll~~~~~~~ 272 (308)
T cd06634 240 SEYFRNFVDSCLQKIPQDRPTS-----EVLLKHRFVLR 272 (308)
T ss_pred cHHHHHHHHHHhhCCcccCCCH-----HHHhhCccccc
Confidence 8999999999999999999998 89999999975
No 310
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=6.9e-40 Score=321.51 Aligned_cols=252 Identities=21% Similarity=0.330 Sum_probs=213.9
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcC-----CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKID-----TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~-----tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
..++|++.+.||+|+||.||+|+.+. +.+.||+|.+.... .......+.+|+.++++++||||+++++++.+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 80 (275)
T cd05046 3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREA 80 (275)
T ss_pred ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCC
Confidence 35789999999999999999999754 35679999886532 222456678899999999999999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEee
Q 011287 118 FSLYMALESCEGGELFDQITSKG---------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIAD 188 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~---------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~D 188 (489)
...|+||||+++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcc
Confidence 99999999999999999998765 699999999999999999999999999999999999999999999999
Q ss_pred ccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHH
Q 011287 189 FGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRI 267 (489)
Q Consensus 189 FG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i 267 (489)
||++....... ........++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+
T Consensus 161 ~~~~~~~~~~~---------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~ 231 (275)
T cd05046 161 LSLSKDVYNSE---------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRL 231 (275)
T ss_pred cccccccCccc---------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHH
Confidence 99987432211 112224467788999999988888999999999999999998 89999887777777776
Q ss_pred HhcCCC--CCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 268 IARDIR--FPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 268 ~~~~~~--~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
...... .+..++..+.+++.+||+.||++||++ .+++.
T Consensus 232 ~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~-----~~~l~ 271 (275)
T cd05046 232 QAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSF-----SELVS 271 (275)
T ss_pred HcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCH-----HHHHH
Confidence 655443 456789999999999999999999998 56653
No 311
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.3e-39 Score=318.45 Aligned_cols=250 Identities=20% Similarity=0.321 Sum_probs=209.3
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCc---EEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGT---VYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF 118 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~---~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 118 (489)
+..++|+..+.||+|+||.||+|+++.++. .+|+|.+..... ......+..|+.+++.++||||+++++++.+..
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT--EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK 79 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC--HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC
Confidence 346789999999999999999999976665 799998865421 223455778999999999999999999999999
Q ss_pred EEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 119 SLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
..|+||||+++++|.+++... +.+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++.....
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 80 PAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999999999764 6799999999999999999999999999999999999999999999999999876543
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCC
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFP 275 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p 275 (489)
.... .........+..|+|||++....++.++|+|||||++|+|++ |..||...+.......+... ....+
T Consensus 160 ~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~ 232 (268)
T cd05063 160 DPEG-------TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAP 232 (268)
T ss_pred cccc-------ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCC
Confidence 2100 000111123457999999988889999999999999999997 99999988887777777553 23344
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
...+.++.+|+.+||+.||++||++
T Consensus 233 ~~~~~~~~~li~~c~~~~p~~Rp~~ 257 (268)
T cd05063 233 MDCPSAVYQLMLQCWQQDRARRPRF 257 (268)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCH
Confidence 5678999999999999999999998
No 312
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.1e-39 Score=329.85 Aligned_cols=258 Identities=28% Similarity=0.405 Sum_probs=209.8
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCC--CcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEE----cCC
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDT--GTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQ----DTF 118 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~t--g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~----~~~ 118 (489)
+|.+.+.||+|+||.||+|++..+ +..||+|.+..... .........+|+.+++++ +||||+++++.+. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 589999999999999999999888 99999999865422 222344566799999998 5999999998653 224
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.+|++++|+. ++|.+.+.....+++..++.++.||+.||+|||++||+||||||+|||++.+++++|+|||+++.+...
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 158 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN 158 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence 5889999986 599999988888999999999999999999999999999999999999999999999999999865432
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC------
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD------ 271 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~------ 271 (489)
... ........+||..|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+....+..+....
T Consensus 159 ~~~------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 159 PGE------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred ccc------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 211 1112235689999999998765 568899999999999999999999998877555444333210
Q ss_pred ----------------------CCC---CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 272 ----------------------IRF---PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 272 ----------------------~~~---p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
..+ ....+..+.+||.+||+.||++||++ .+++.||||+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~-----~~ll~~~~~~~ 297 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISV-----EEALEHPYLAI 297 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCH-----HHHhcChhhhh
Confidence 011 12357899999999999999999998 88999999964
No 313
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1e-39 Score=318.14 Aligned_cols=242 Identities=21% Similarity=0.345 Sum_probs=204.9
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.++|++.+.||+|+||.||+|.+..+ ..+|+|.+..... ....+.+|+.+++.++|||++++++++.+ ...|+|
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 78 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIV 78 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEE
Confidence 46899999999999999999998654 4699998765422 23456779999999999999999988864 568999
Q ss_pred EeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 124 LESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
|||+.+++|.+++... ..+++..+..++.|++.||.|||+.|++||||||+||++++++.++|+|||++........
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY- 157 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc-
Confidence 9999999999999764 3489999999999999999999999999999999999999999999999999976533211
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCCC
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYFS 279 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~~ 279 (489)
.......++..|+|||.+.+..++.++|+|||||++|+|++ |.+||.+.+.......+... ...+|..++
T Consensus 158 --------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (260)
T cd05069 158 --------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCP 229 (260)
T ss_pred --------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccC
Confidence 11112345678999999988889999999999999999999 99999998887777666554 334567789
Q ss_pred HHHHHHHHHhhccCCCCCCCC
Q 011287 280 DAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~ 300 (489)
..+.+++.+||..||++||++
T Consensus 230 ~~~~~li~~~l~~~p~~Rp~~ 250 (260)
T cd05069 230 ESLHELMKLCWKKDPDERPTF 250 (260)
T ss_pred HHHHHHHHHHccCCcccCcCH
Confidence 999999999999999999998
No 314
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.1e-40 Score=326.09 Aligned_cols=251 Identities=22% Similarity=0.374 Sum_probs=211.2
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEc-------CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEE
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKI-------DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLF 111 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~-------~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~ 111 (489)
-.+..++|.+++.||+|+||.||+|+.. ..+..||+|.+.... .......+.+|+.+++.+ +||||++++
T Consensus 10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchhee
Confidence 3466789999999999999999999853 234579999986542 223345677899999999 899999999
Q ss_pred EEEEcCCEEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCC
Q 011287 112 FTFQDTFSLYMALESCEGGELFDQITSKG----------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPEN 175 (489)
Q Consensus 112 ~~~~~~~~lylV~E~~~gg~L~~~l~~~~----------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeN 175 (489)
+.+.+...+|+||||+.+|+|.+++.+.. .++...+..++.||+.||.|||++||+||||||+|
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N 167 (304)
T cd05101 88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN 167 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce
Confidence 99999999999999999999999997642 36788899999999999999999999999999999
Q ss_pred eeeCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCC
Q 011287 176 LLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSP 254 (489)
Q Consensus 176 ILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~P 254 (489)
|+++.++.++|+|||+++.+..... ........++..|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p 239 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDY--------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 239 (304)
T ss_pred EEEcCCCcEEECCCccceecccccc--------cccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999986543211 011122345678999999998889999999999999999998 8999
Q ss_pred CCCCCHHHHHHHHHhcC-CCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 255 FKDTSEWLIFQRIIARD-IRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 255 F~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
|.+.+..++...+.... ...|..++.++.+||.+||..+|.+||++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~ 286 (304)
T cd05101 240 YPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTF 286 (304)
T ss_pred cccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCH
Confidence 99988888877765543 34567789999999999999999999998
No 315
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1e-39 Score=329.94 Aligned_cols=253 Identities=26% Similarity=0.426 Sum_probs=209.1
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc-CCEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD-TFSLY 121 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~ly 121 (489)
..++|++.+.||.|+||.||+|.+..+|+.||+|.+.+.... ......+..|+.+++.++||||++++++|.. ....|
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-PVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 357899999999999999999999999999999998764322 2334556679999999999999999999875 56789
Q ss_pred EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 122 MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
+||||+ +++|..++.. +.+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||.+.....
T Consensus 87 lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~---- 160 (328)
T cd07856 87 FVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP---- 160 (328)
T ss_pred EEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC----
Confidence 999999 5688887764 4689999999999999999999999999999999999999999999999999874321
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh-----------
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA----------- 269 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~----------- 269 (489)
......++..|+|||.+.+ ..++.++|+|||||++|+|++|++||.+.+....+..+.+
T Consensus 161 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd07856 161 ---------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVIN 231 (328)
T ss_pred ---------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 1124567889999998765 5688999999999999999999999987665332221111
Q ss_pred ---------------cCCCC-----CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 270 ---------------RDIRF-----PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 270 ---------------~~~~~-----p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
..... .+.++.++.++|++||+.+|++||++ ++++.||||..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~-----~ell~~~~~~~ 293 (328)
T cd07856 232 TICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISA-----AEALAHPYLAP 293 (328)
T ss_pred hccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCH-----HHHhcCCcccc
Confidence 00011 13467899999999999999999998 89999999974
No 316
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=6e-41 Score=312.25 Aligned_cols=259 Identities=27% Similarity=0.444 Sum_probs=215.8
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCC
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTF 118 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~ 118 (489)
.+..+++.+++..||.|+.|+|++++.+.+|...|||.|.+..... ....+.+...++... ++|+||+.|++|..+.
T Consensus 87 ~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nke--e~kRILmDldvv~~s~dcpyIV~c~GyFi~n~ 164 (391)
T KOG0983|consen 87 YQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKE--ENKRILMDLDVVLKSHDCPYIVQCFGYFITNT 164 (391)
T ss_pred cccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHH--HHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc
Confidence 3445667889999999999999999999999999999998764333 334566666666555 4899999999999999
Q ss_pred EEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 119 SLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
.+++.||.|.- .+..++.+ .++++|..+-.+...++.||.||-. +||+|||+||+|||+|+.|++||||||.+..+.
T Consensus 165 dV~IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlv 243 (391)
T KOG0983|consen 165 DVFICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV 243 (391)
T ss_pred hHHHHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceee
Confidence 99999999843 44455544 3679999999999999999999986 589999999999999999999999999998776
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCC---CCCCCCcchhhhHHHHHHhhCCCCCCCC-CHHHHHHHHHhcCC
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS---PATFGNDLWALGCTLYQMLSGTSPFKDT-SEWLIFQRIIARDI 272 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~---~~~~~sDiwSLG~ilyelltG~~PF~~~-~~~~~~~~i~~~~~ 272 (489)
++. ......|-+.|||||.+.-. .|+..+||||||+.++||.||+.||.+. ++.+++-+|++..+
T Consensus 244 dSk-----------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP 312 (391)
T KOG0983|consen 244 DSK-----------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP 312 (391)
T ss_pred ccc-----------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC
Confidence 543 12234689999999999643 5889999999999999999999999884 56778888887654
Q ss_pred C-CCC--CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 273 R-FPN--YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 273 ~-~p~--~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
. +|. .+++.+++|+..||.+|+.+||.. .+|++|||....
T Consensus 313 P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y-----~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 313 PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKY-----NKLLEHPFIKRY 355 (391)
T ss_pred CCCCcccCcCHHHHHHHHHHhhcCcccCcch-----HHHhcCcceeec
Confidence 3 332 489999999999999999999965 899999999753
No 317
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=9.6e-40 Score=323.06 Aligned_cols=248 Identities=21% Similarity=0.341 Sum_probs=209.6
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEc-----CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKI-----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~-----~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
..++|++.+.||+|+||.||+|.+. .++..||+|++..... ......+.+|+.+++.++||||+++++++.+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC--HHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 4579999999999999999999974 3678999999865422 23345577899999999999999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhCC----------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCC
Q 011287 118 FSLYMALESCEGGELFDQITSKG----------------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPEN 175 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~----------------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeN 175 (489)
..+|+||||+.+|+|.+++.... .+++..+..++.||+.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999999997432 37888899999999999999999999999999999
Q ss_pred eeeCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCC
Q 011287 176 LLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSP 254 (489)
Q Consensus 176 ILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~P 254 (489)
|+++.++.++|+|||++..+..... ........++..|+|||.+.+..++.++|+|||||++|+|++ |..|
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p 232 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADY--------YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQP 232 (288)
T ss_pred eEecCCCceEECccccceecccCcc--------ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999875432210 001112234567999999998889999999999999999997 8899
Q ss_pred CCCCCHHHHHHHHHhcCC-CCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 255 FKDTSEWLIFQRIIARDI-RFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 255 F~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
|.+.+..+....+..... ..|..++.++.+||.+||+.||.+||++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~ 279 (288)
T cd05050 233 YYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSF 279 (288)
T ss_pred CCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCH
Confidence 988888777777765543 4567789999999999999999999998
No 318
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4e-40 Score=329.82 Aligned_cols=258 Identities=26% Similarity=0.380 Sum_probs=204.8
Q ss_pred EEeee--CceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 52 IYGVG--SYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 52 ~LG~G--~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
+||+| ++|.||.++...+++.||+|++...... ......+..|+.+++.++||||++++++|.+....|++|||+++
T Consensus 5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCS-KEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccc-hhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence 34443 5566777777779999999999765322 33456788899999999999999999999999999999999999
Q ss_pred CChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCC
Q 011287 130 GELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207 (489)
Q Consensus 130 g~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~ 207 (489)
|+|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.++|+|||.+..+........ .
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~---~ 160 (314)
T cd08216 84 GSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR---V 160 (314)
T ss_pred CCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccc---c
Confidence 9999999864 4589999999999999999999999999999999999999999999999999876533221100 0
Q ss_pred CCCCccceecCCcCCChhhhcCC--CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC--------------
Q 011287 208 SDDKACTFVGTAAYVPPEVLNSS--PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD-------------- 271 (489)
Q Consensus 208 ~~~~~~~~~gt~~Y~aPE~l~~~--~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~-------------- 271 (489)
.........++..|+|||++... .++.++|+|||||++|+|++|..||..............+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYE 240 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhc
Confidence 11122345678899999999763 57889999999999999999999998765544322111110
Q ss_pred --------------------CCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 272 --------------------IRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 272 --------------------~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
...+..++.++.+|+.+||+.||++||++ .++++||||+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~-----~~ll~~p~~~~~~ 302 (314)
T cd08216 241 DSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSA-----SQLLNHSFFKQCK 302 (314)
T ss_pred CCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCH-----HHHhcCchHhhhc
Confidence 01112345789999999999999999999 8999999998653
No 319
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4.2e-40 Score=320.37 Aligned_cols=253 Identities=29% Similarity=0.503 Sum_probs=215.7
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeeccccc--chhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT--KENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
+|.+.+.||+|+||.||+|++..++..+++|+++..... .......+..|..+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 589999999999999999999888888888887643321 222334566788999999999999999999999999999
Q ss_pred EeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 124 LESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++. +.++|+|||++.......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999999999988764 356999999999999999999999999999999999999974 679999999987653221
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-CCCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-DIRFPNYF 278 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-~~~~p~~~ 278 (489)
.......|+..|+|||.+.+..++.++|+||||+++|+|++|..||.+.+.......+... ...+|..+
T Consensus 160 ----------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (260)
T cd08222 160 ----------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETY 229 (260)
T ss_pred ----------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchh
Confidence 1223456888999999998888899999999999999999999999887777666666554 34466788
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
+.++.++|.+||..||++||++ .+++.||||
T Consensus 230 ~~~~~~li~~~l~~~p~~Rp~~-----~~il~~~~~ 260 (260)
T cd08222 230 SRQLNSIMQSMLNKDPSLRPSA-----AEILRNPFI 260 (260)
T ss_pred cHHHHHHHHHHhcCChhhCcCH-----HHHhhCCCC
Confidence 9999999999999999999998 899999997
No 320
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=5.7e-40 Score=322.77 Aligned_cols=251 Identities=29% Similarity=0.493 Sum_probs=212.8
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEec
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALES 126 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~ 126 (489)
|++.+.||.|++|.||+|.+..+|+.+|+|.+...... ......+..|..++++++||||+++++++.+...+|+||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 67889999999999999999999999999998765332 23445677799999999999999999999999999999999
Q ss_pred cCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 127 CEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 127 ~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
+++ +|.+++... +.+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~------ 152 (283)
T cd05118 80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV------ 152 (283)
T ss_pred cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc------
Confidence 975 888888764 679999999999999999999999999999999999999999999999999987654321
Q ss_pred CCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-------------
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD------------- 271 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~------------- 271 (489)
.......++..|+|||.+.+. .++.++|+|||||++|+|++|+.||.+.+..+.+.++....
T Consensus 153 ----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 153 ----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred ----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchh
Confidence 111234678899999999876 68999999999999999999999998888766555543210
Q ss_pred ------CCC-----------CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 ------IRF-----------PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 ------~~~-----------p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
..+ .+.++.++.++|.+||+.||.+||++ .++++||||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~-----~~ll~~~~~ 283 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITA-----EQALAHPYF 283 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCH-----HHHhhCCCC
Confidence 011 12367899999999999999999998 899999997
No 321
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=6.5e-40 Score=322.21 Aligned_cols=251 Identities=29% Similarity=0.490 Sum_probs=212.7
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEec
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALES 126 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~ 126 (489)
|++.+.||+|+||.||+|++..+++.||+|++.... ........+..|+.+++.++||||+++++++.+....|+||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 678899999999999999999999999999998654 2233345566799999999999999999999999999999999
Q ss_pred cCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 127 CEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 127 ~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
+.+ +|.+++.+. ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~------ 152 (282)
T cd07829 80 CDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL------ 152 (282)
T ss_pred cCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc------
Confidence 984 999999876 579999999999999999999999999999999999999999999999999987653321
Q ss_pred CCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--------------
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR-------------- 270 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~-------------- 270 (489)
.......++..|+|||.+.+. .++.++|+|||||++|+|++|.+||.+.+....+.++...
T Consensus 153 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 153 ----RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred ----cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcc
Confidence 112233567889999998776 7899999999999999999999999988766655544321
Q ss_pred ----CCCCC-----------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 271 ----DIRFP-----------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 271 ----~~~~p-----------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
...+| +.++..+.++|++||+.||++||++ .++++||||
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~-----~~~l~~p~~ 282 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISA-----KEALKHPYF 282 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCH-----HHHhhCcCC
Confidence 01111 1247889999999999999999998 899999998
No 322
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=7.3e-40 Score=331.81 Aligned_cols=262 Identities=31% Similarity=0.478 Sum_probs=214.6
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEc--CCE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQD--TFS 119 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~--~~~ 119 (489)
..++|++.+.||+|+||.||+|.+..+|..||+|.+.+...... ....+.+|+.+++.+ +||||+++++++.. ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~-~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNAT-DAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcch-hhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 45789999999999999999999999999999999865433322 234566799999999 99999999999864 346
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
.|+||||+.+ +|..++... .+++..++.++.||+.||.|||+.||+||||||+||+++.+|.++|+|||.+..+....
T Consensus 84 ~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 84 IYLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred EEEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 8999999974 999988765 78999999999999999999999999999999999999999999999999998654322
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC------
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI------ 272 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~------ 272 (489)
... .......++||..|+|||.+.+ ..++.++|+|||||++|+|++|++||.+........++.....
T Consensus 162 ~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 162 ENP-----ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred ccc-----cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 110 1122335678999999998755 4578899999999999999999999988766554444322110
Q ss_pred -------------------------CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 273 -------------------------RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 273 -------------------------~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.....++.++.+||.+||+.||++||++ .++++||||+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~-----~~il~~~~~~~~ 301 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTA-----EEALEHPYVAQF 301 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCH-----HHHhhChhhhhh
Confidence 0112368899999999999999999998 899999999875
No 323
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.7e-39 Score=320.26 Aligned_cols=248 Identities=19% Similarity=0.314 Sum_probs=204.1
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcE----EEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTV----YALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~----vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
+..++|++++.||+|+||+||+|.+..++.. +++|.+... ........+..|..+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~- 80 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG- 80 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-
Confidence 5678999999999999999999999888774 666665432 112233456667888899999999999998754
Q ss_pred CEEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 118 FSLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
...++++||+.+|+|.+++... +.+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 5678999999999999999764 579999999999999999999999999999999999999999999999999997653
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC-CCC
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD-IRF 274 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~-~~~ 274 (489)
.... ........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.......+.+..+. ...
T Consensus 161 ~~~~--------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 232 (279)
T cd05111 161 PDDK--------KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQ 232 (279)
T ss_pred CCCc--------ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC
Confidence 2210 111123456778999999998889999999999999999998 999999887766555554433 334
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 275 PNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 275 p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
|...+.++.+++.+|+..||++||++
T Consensus 233 ~~~~~~~~~~li~~c~~~~p~~Rps~ 258 (279)
T cd05111 233 PQICTIDVYMVMVKCWMIDENVRPTF 258 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCcCH
Confidence 55678899999999999999999999
No 324
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=9.8e-40 Score=324.45 Aligned_cols=248 Identities=20% Similarity=0.300 Sum_probs=205.2
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCC--------------cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCcc
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTG--------------TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV 108 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg--------------~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv 108 (489)
..++|++.+.||+|+||.||+|++..++ ..||+|.+.... .......+.+|+.++++++||||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcC
Confidence 3579999999999999999999875432 358999986542 233455688899999999999999
Q ss_pred EEEEEEEcCCEEEEEEeccCCCChHHHHHhCC------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCe
Q 011287 109 RLFFTFQDTFSLYMALESCEGGELFDQITSKG------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENL 176 (489)
Q Consensus 109 ~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~~------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNI 176 (489)
++++++......|+||||+.+++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 99999999999999999999999999986532 368889999999999999999999999999999999
Q ss_pred eeCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh--CCCC
Q 011287 177 LLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS--GTSP 254 (489)
Q Consensus 177 Ll~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt--G~~P 254 (489)
+++.++.+||+|||++..+..... ........++..|+|||++.+..++.++|+|||||++|+|++ |..|
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p 232 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDY--------YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQP 232 (295)
T ss_pred EEcCCCcEEecccccccccccCcc--------eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999875432210 111223355778999999998889999999999999999988 7789
Q ss_pred CCCCCHHHHHHHHHh--------cCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 255 FKDTSEWLIFQRIIA--------RDIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 255 F~~~~~~~~~~~i~~--------~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
|...+.......+.. .....+..+++.+.+||.+||+.||++||++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~ 286 (295)
T cd05097 233 YSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTF 286 (295)
T ss_pred CcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCH
Confidence 988777665554432 1123355678999999999999999999998
No 325
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2e-39 Score=314.59 Aligned_cols=248 Identities=22% Similarity=0.368 Sum_probs=211.3
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
..+|++.+.||+|+||.||+|.+. ++..+|+|.+...... ...+..|+.+++.++||||+++++++.+....|+|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 568999999999999999999885 4778999988654332 23467799999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 124 LESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|||+.+++|.+++... +.+++..+..++.|++.||+|||+.|++||||||+||+++.++.++|+|||.+........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-- 155 (256)
T cd05112 78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-- 155 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcc--
Confidence 9999999999998764 5689999999999999999999999999999999999999999999999999875432210
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCCCH
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYFSD 280 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~~~ 280 (489)
.......++..|+|||.+.+..++.++|+|||||++|+|++ |++||.........+.+... ....|...+.
T Consensus 156 -------~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
T cd05112 156 -------TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQ 228 (256)
T ss_pred -------cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCH
Confidence 01112235678999999998889999999999999999998 99999988887777777654 3344667899
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 281 AARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
++.+|+.+||+.+|++||++ .++++
T Consensus 229 ~~~~l~~~~l~~~p~~Rp~~-----~~~l~ 253 (256)
T cd05112 229 SVYELMQHCWKERPEDRPSF-----SLLLH 253 (256)
T ss_pred HHHHHHHHHcccChhhCCCH-----HHHHH
Confidence 99999999999999999998 56654
No 326
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.6e-39 Score=315.56 Aligned_cols=240 Identities=24% Similarity=0.411 Sum_probs=204.9
Q ss_pred eEEeeeCceEEEEEEEcC-CCc--EEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEecc
Q 011287 51 KIYGVGSYSKVVRAKKID-TGT--VYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESC 127 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~-tg~--~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~ 127 (489)
+.||+|++|.||+|.+.. ++. .||+|.+...... .....+.+|..++++++||||+++++.+.+ ...++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999999865 333 6999999776443 455678889999999999999999999988 8999999999
Q ss_pred CCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 128 EGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 128 ~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
++++|.+++.+.. .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++..+......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~---- 153 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH---- 153 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc----
Confidence 9999999998764 6899999999999999999999999999999999999999999999999999876432110
Q ss_pred CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc--CCCCCCCCCHHH
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR--DIRFPNYFSDAA 282 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~--~~~~p~~~~~~~ 282 (489)
........++..|+|||.+.+..++.++|+|||||++|+|++ |..||...+..+....+... ....|...+..+
T Consensus 154 ---~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (257)
T cd05040 154 ---YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDI 230 (257)
T ss_pred ---eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHH
Confidence 011113457788999999999899999999999999999998 99999988888777766643 233556788999
Q ss_pred HHHHHHhhccCCCCCCCC
Q 011287 283 RDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 283 ~~Li~~~L~~dP~~R~t~ 300 (489)
.+++.+||+.+|++||++
T Consensus 231 ~~li~~~l~~~p~~Rps~ 248 (257)
T cd05040 231 YNVMLQCWAHNPADRPTF 248 (257)
T ss_pred HHHHHHHCCCCcccCCCH
Confidence 999999999999999998
No 327
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-39 Score=329.33 Aligned_cols=259 Identities=23% Similarity=0.365 Sum_probs=213.0
Q ss_pred CCCCCCCCCeEEeeEEeeeCceEEEEEEEcCC-------CcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccE
Q 011287 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDT-------GTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVR 109 (489)
Q Consensus 38 ~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~t-------g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~ 109 (489)
|.-.+...+|.+++.||+|+||.||+|++... +..||+|++.... .......+.+|+.+++++ +||||++
T Consensus 5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~ 82 (334)
T cd05100 5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIIN 82 (334)
T ss_pred cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeee
Confidence 33344556899999999999999999986432 2478999886431 223345677899999999 7999999
Q ss_pred EEEEEEcCCEEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCC
Q 011287 110 LFFTFQDTFSLYMALESCEGGELFDQITSKG----------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKP 173 (489)
Q Consensus 110 l~~~~~~~~~lylV~E~~~gg~L~~~l~~~~----------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKp 173 (489)
+++++.+...+|++|||+++|+|.+++.+.. .++...+..++.||+.||.|||++||+||||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp 162 (334)
T cd05100 83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA 162 (334)
T ss_pred eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 9999999999999999999999999997632 377888899999999999999999999999999
Q ss_pred CCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CC
Q 011287 174 ENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GT 252 (489)
Q Consensus 174 eNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~ 252 (489)
+|||++.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|+|++ |.
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~ 234 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYY--------KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGG 234 (334)
T ss_pred ceEEEcCCCcEEECCcccceeccccccc--------ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCC
Confidence 9999999999999999998765432110 01112234567999999999999999999999999999998 89
Q ss_pred CCCCCCCHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcC
Q 011287 253 SPFKDTSEWLIFQRIIAR-DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMH 311 (489)
Q Consensus 253 ~PF~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~h 311 (489)
.||.+.+....+..+... ....|..++.++.+||.+||+.+|++||++ .+++++
T Consensus 235 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-----~ell~~ 289 (334)
T cd05100 235 SPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTF-----KQLVED 289 (334)
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCH-----HHHHHH
Confidence 999998887777776554 335667789999999999999999999998 566643
No 328
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.5e-39 Score=322.12 Aligned_cols=246 Identities=22% Similarity=0.365 Sum_probs=205.9
Q ss_pred CeEEeeEEeeeCceEEEEEEEcC-----CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKID-----TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~-----tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~l 120 (489)
+|++.+.||+|+||.||+|++.. ....+|+|.+.+... ......+.+|+.+++.++||||+++++.+......
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 58899999999999999998753 336789998865422 22345677899999999999999999999999999
Q ss_pred EEEEeccCCCChHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCe
Q 011287 121 YMALESCEGGELFDQITSK------------------------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENL 176 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~------------------------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNI 176 (489)
|+||||+.+|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999988642 2478899999999999999999999999999999999
Q ss_pred eeCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCC
Q 011287 177 LLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPF 255 (489)
Q Consensus 177 Ll~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF 255 (489)
|+++++.++|+|||+++........ .......++..|+|||.+.+..++.++|||||||++|+|++ |..||
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 230 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSY--------VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 230 (290)
T ss_pred EEcCCCcEEeccccccccccCccch--------hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999998765332110 11122345678999999988889999999999999999998 99999
Q ss_pred CCCCHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 256 KDTSEWLIFQRIIAR-DIRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 256 ~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
.+.....+.+.+... ....|..++.++.+++.+||+.||++||++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~ 277 (290)
T cd05045 231 PGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFA 277 (290)
T ss_pred CCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 988877766655432 3345677899999999999999999999983
No 329
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3e-39 Score=318.08 Aligned_cols=249 Identities=20% Similarity=0.319 Sum_probs=211.7
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCc----EEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGT----VYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~----~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
+...+|++++.||+|+||.||+|.++.+|. .||+|.+.+... ......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~- 80 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS- 80 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-
Confidence 456899999999999999999999877665 589998865532 3344567789999999999999999999887
Q ss_pred CEEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 118 FSLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
...++||||+++|+|.+++... +.+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||.++...
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 7899999999999999999874 569999999999999999999999999999999999999999999999999998654
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC-CCC
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD-IRF 274 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~-~~~ 274 (489)
...... ......++..|+|||.+....++.++|+|||||++|++++ |..||.+....++.+.+.... ...
T Consensus 161 ~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 232 (279)
T cd05057 161 VDEKEY--------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQ 232 (279)
T ss_pred Ccccce--------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCC
Confidence 321110 0011123567999999988889999999999999999998 999999988877777776543 456
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 275 PNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 275 p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
|...+.++.+++.+||..||++||++.
T Consensus 233 ~~~~~~~~~~~~~~~l~~~p~~Rp~~~ 259 (279)
T cd05057 233 PPICTIDVYMVLVKCWMIDAESRPTFK 259 (279)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 677889999999999999999999984
No 330
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.8e-39 Score=314.04 Aligned_cols=244 Identities=22% Similarity=0.348 Sum_probs=206.3
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
+..++|++.+.||+|+||.||+|.+. .+..+|+|.+... ......+.+|+.+++.++|+||+++++.+.+ ...|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeE
Confidence 34689999999999999999999864 4567999988643 2234567779999999999999999999988 7789
Q ss_pred EEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcc
Q 011287 122 MALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~ 199 (489)
++|||+++++|.+++.+. ..+++..+..++.||+.||.|||+.|++||||||+||+++.++.++|+|||.+..+....
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 999999999999999764 457888999999999999999999999999999999999999999999999987654321
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCC
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNY 277 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~ 277 (489)
. .......++..|+|||++....++.++|+|||||++|++++ |.+||.+.+.......+... ....+..
T Consensus 157 ~---------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 227 (260)
T cd05073 157 Y---------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPEN 227 (260)
T ss_pred c---------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCccc
Confidence 1 11112345678999999998889999999999999999998 99999988777766665543 2345567
Q ss_pred CCHHHHHHHHHhhccCCCCCCCC
Q 011287 278 FSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 278 ~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.+.++.+++.+||+.||++||++
T Consensus 228 ~~~~~~~~i~~~l~~~p~~Rp~~ 250 (260)
T cd05073 228 CPEELYNIMMRCWKNRPEERPTF 250 (260)
T ss_pred CCHHHHHHHHHHcccCcccCcCH
Confidence 89999999999999999999987
No 331
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.1e-39 Score=322.20 Aligned_cols=247 Identities=20% Similarity=0.320 Sum_probs=203.2
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcC----------------CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCc
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKID----------------TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGV 107 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~----------------tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnI 107 (489)
.++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++.++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCc
Confidence 4689999999999999999986532 34579999986542 23344567789999999999999
Q ss_pred cEEEEEEEcCCEEEEEEeccCCCChHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCe
Q 011287 108 VRLFFTFQDTFSLYMALESCEGGELFDQITSKG-----------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENL 176 (489)
Q Consensus 108 v~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~~-----------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNI 176 (489)
+++++++.+...+|+||||+.+|+|.+++.... .+++..+..++.||+.||+|||+.|++||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 999999999999999999999999999987643 367789999999999999999999999999999999
Q ss_pred eeCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh--CCCC
Q 011287 177 LLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS--GTSP 254 (489)
Q Consensus 177 Ll~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt--G~~P 254 (489)
|++.++.++|+|||+++.+..... ........++..|+|||......++.++|+|||||++|+|++ |..|
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p 233 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDY--------YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQP 233 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcc--------eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCC
Confidence 999999999999999876532210 111223345678999999888889999999999999999998 7899
Q ss_pred CCCCCHHHHHHHHHh--------cCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 255 FKDTSEWLIFQRIIA--------RDIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 255 F~~~~~~~~~~~i~~--------~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
|...+..+....... .....|..+++.+.+|+.+||+.||++||++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~ 287 (296)
T cd05095 234 YSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSF 287 (296)
T ss_pred ccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCH
Confidence 987766555443211 1223456688999999999999999999998
No 332
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.7e-39 Score=312.86 Aligned_cols=244 Identities=23% Similarity=0.359 Sum_probs=206.8
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGG 130 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg 130 (489)
++||.|+||.||+|.+.. ++.||+|.+...... .....+..|+.+++.++||||+++++++.+....|+||||+.++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 478999999999999987 999999998765332 34456778999999999999999999999999999999999999
Q ss_pred ChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 131 ELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 131 ~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
+|.+++.+. ..+++..+..++.+++.||.|||++|++||||||+||+++.++.++|+|||++.........
T Consensus 78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~-------- 149 (251)
T cd05041 78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT-------- 149 (251)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcce--------
Confidence 999999764 56899999999999999999999999999999999999999999999999998754321110
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCCCHHHHHHHH
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYFSDAARDLID 287 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~Li~ 287 (489)
.......++..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+... ....|..++.++.+++.
T Consensus 150 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 229 (251)
T cd05041 150 VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLML 229 (251)
T ss_pred eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHH
Confidence 01112234567999999988889999999999999999999 89999888877766666543 34567788999999999
Q ss_pred HhhccCCCCCCCCCCCCHHHHhc
Q 011287 288 RLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 288 ~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
+||+.+|.+||++ .++++
T Consensus 230 ~~l~~~p~~Rp~~-----~ell~ 247 (251)
T cd05041 230 QCWAYDPENRPSF-----SEIYN 247 (251)
T ss_pred HHhccChhhCcCH-----HHHHH
Confidence 9999999999998 56653
No 333
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.6e-39 Score=315.12 Aligned_cols=240 Identities=20% Similarity=0.304 Sum_probs=199.8
Q ss_pred EEeeeCceEEEEEEEc--CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 52 IYGVGSYSKVVRAKKI--DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 52 ~LG~G~~g~Vy~a~~~--~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.++||||++++++++. ...++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence 3899999999999875 456679999986542 23344568889999999999999999998864 478999999999
Q ss_pred CChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCC
Q 011287 130 GELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208 (489)
Q Consensus 130 g~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~ 208 (489)
++|.+++.. .+.+++..+..++.||+.||.|||++|++||||||+|||++.++.++|+|||++..+.......
T Consensus 79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~------ 152 (257)
T cd05115 79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY------ 152 (257)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccce------
Confidence 999999875 4579999999999999999999999999999999999999999999999999987553321100
Q ss_pred CCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCCCHHHHHHH
Q 011287 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYFSDAARDLI 286 (489)
Q Consensus 209 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~Li 286 (489)
.......++..|+|||.+....++.++|+|||||++|+|++ |..||.+.........+..+ ...+|...++++.++|
T Consensus 153 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 231 (257)
T cd05115 153 -KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALM 231 (257)
T ss_pred -eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Confidence 00111123568999999988889999999999999999996 99999988877766666553 3567788899999999
Q ss_pred HHhhccCCCCCCCCC
Q 011287 287 DRLLDVDPSGRPGAG 301 (489)
Q Consensus 287 ~~~L~~dP~~R~t~~ 301 (489)
.+||+.||++||+..
T Consensus 232 ~~c~~~~~~~Rp~~~ 246 (257)
T cd05115 232 KDCWIYKWEDRPNFA 246 (257)
T ss_pred HHHcCCChhhCcCHH
Confidence 999999999999983
No 334
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-41 Score=311.43 Aligned_cols=261 Identities=29% Similarity=0.419 Sum_probs=208.2
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc----
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD---- 116 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 116 (489)
.++-++|.|.+.||+|||+-||+++...+++.||+|.+.... ....+...+|++..++++|||+++++++...
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 345679999999999999999999999999999999987653 4456678889999999999999999876543
Q ss_pred -CCEEEEEEeccCCCChHHHHHhC---C-CCCHHHHHHHHHHHHHHHHHHHhCC--cEeeccCCCCeeeCCCCCEEEeec
Q 011287 117 -TFSLYMALESCEGGELFDQITSK---G-HLSEDEARFYTAEVVDALEYIHSMG--LIHRDIKPENLLLTADGHIKIADF 189 (489)
Q Consensus 117 -~~~lylV~E~~~gg~L~~~l~~~---~-~l~e~~~~~i~~qil~aL~~LH~~g--IiHrDLKpeNILl~~~g~ikL~DF 189 (489)
...+|++++|...|+|.+.+++. | .++|.++..|+.+|+.||++||+.. .+||||||.|||+++.+.++|.||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 34599999999999999998764 3 6999999999999999999999998 999999999999999999999999
Q ss_pred cCccccCCccccccCCCCCCCCccceecCCcCCChhhhc---CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHH--HHH
Q 011287 190 GSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLN---SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEW--LIF 264 (489)
Q Consensus 190 G~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~--~~~ 264 (489)
|++....-.-... ...........-..|..|+|||.+. +...+.++|||||||++|.|+.|..||...-.. .+.
T Consensus 174 GS~~~a~i~i~~~-~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla 252 (302)
T KOG2345|consen 174 GSATQAPIQIEGS-RQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA 252 (302)
T ss_pred cCccccceEeech-HHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE
Confidence 9987542210000 0000000111224688999999985 445789999999999999999999999542110 011
Q ss_pred HHHHhcCCCCCC--CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 265 QRIIARDIRFPN--YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 265 ~~i~~~~~~~p~--~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
-.+....+.+|. .+|..+.+||+.||+.||.+||++ .+++.
T Consensus 253 LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i-----~~ll~ 295 (302)
T KOG2345|consen 253 LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTI-----PELLS 295 (302)
T ss_pred EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCH-----HHHHH
Confidence 233455677775 489999999999999999999998 55654
No 335
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-41 Score=326.47 Aligned_cols=251 Identities=26% Similarity=0.464 Sum_probs=210.0
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCC--C----CccEEEEEEEcC
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH--P----GVVRLFFTFQDT 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~h--p----nIv~l~~~~~~~ 117 (489)
..+|.+++.+|+|.||.|..+.+.+++..||||+++.- ....+....|+++|.++.+ | -+|++.++|.-.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 57899999999999999999999999999999998643 3344556679999999932 2 267788889999
Q ss_pred CEEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC---------------
Q 011287 118 FSLYMALESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA--------------- 180 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~--------------- 180 (489)
+.+++|+|.+ |-++++++..++ +|+...++.+++||+.+++|||+++++|-||||||||+..
T Consensus 164 ghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999999 559999998764 6999999999999999999999999999999999999832
Q ss_pred -----CCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCC
Q 011287 181 -----DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF 255 (489)
Q Consensus 181 -----~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF 255 (489)
+-+|+|+|||.|..-. ...++.+.|..|+|||++.+-+++..+||||+||||+|+++|...|
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~-------------e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LF 309 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDH-------------EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLF 309 (415)
T ss_pred eccCCCcceEEEecCCcceec-------------cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceec
Confidence 2368999999998532 3346789999999999999999999999999999999999999999
Q ss_pred CCCCHHH---HHHHHHhc------------------CCCCCCC-------------------------CCHHHHHHHHHh
Q 011287 256 KDTSEWL---IFQRIIAR------------------DIRFPNY-------------------------FSDAARDLIDRL 289 (489)
Q Consensus 256 ~~~~~~~---~~~~i~~~------------------~~~~p~~-------------------------~~~~~~~Li~~~ 289 (489)
....+.+ ++++|+.. .+..|+. -..++.|||++|
T Consensus 310 qtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~m 389 (415)
T KOG0671|consen 310 QTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRM 389 (415)
T ss_pred ccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHH
Confidence 9877555 55666531 1111211 123478999999
Q ss_pred hccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 290 LDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 290 L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
|..||.+|+|+ .|++.||||+..
T Consensus 390 L~fDP~~RiTl-----~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 390 LEFDPARRITL-----REALSHPFFARL 412 (415)
T ss_pred HccCccccccH-----HHHhcCHHhhcC
Confidence 99999999999 889999999864
No 336
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.7e-41 Score=341.87 Aligned_cols=251 Identities=22% Similarity=0.403 Sum_probs=220.2
Q ss_pred EEeeEEeeeCceEEEEEEEcCCCcEEEEEEeeccc-ccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE--EEEEE
Q 011287 48 ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKF-ITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS--LYMAL 124 (489)
Q Consensus 48 ~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~-~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~--lylV~ 124 (489)
++..+||+|+|-+||+|.|..+|.+||.-.+.-.. ...+...+.+..|+.+|+.|+||||+++|+++.+... +-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 77889999999999999999999999966554332 2344556788899999999999999999999987655 88999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC--cEeeccCCCCeeeCCC-CCEEEeeccCccccCCcccc
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMG--LIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~g--IiHrDLKpeNILl~~~-g~ikL~DFG~a~~~~~~~~~ 201 (489)
|.+..|+|..|+++.+.++...++.|+.||+.||.|||++. |||||||.+||||+.+ |.|||+|+|+|..+...
T Consensus 123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--- 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--- 199 (632)
T ss_pred ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc---
Confidence 99999999999999999999999999999999999999995 9999999999999875 89999999999976532
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCC-CCHHHHHHHHHhcCCC--CCCCC
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD-TSEWLIFQRIIARDIR--FPNYF 278 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~-~~~~~~~~~i~~~~~~--~p~~~ 278 (489)
.+.+.+|||.|||||++. ..|+..+||||||+.+.||+|+..||.. .+..++++++..+..+ |-..-
T Consensus 200 ---------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~ 269 (632)
T KOG0584|consen 200 ---------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVK 269 (632)
T ss_pred ---------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccC
Confidence 344679999999999997 7899999999999999999999999964 6778888888876432 33444
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
.+++++||.+||.. .++||++ .+||+||||..-
T Consensus 270 dPevr~fIekCl~~-~~~R~sa-----~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 270 DPEVREFIEKCLAT-KSERLSA-----KELLKDPFFDED 302 (632)
T ss_pred CHHHHHHHHHHhcC-chhccCH-----HHHhhChhhccc
Confidence 79999999999999 9999999 899999999753
No 337
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=3.1e-39 Score=321.01 Aligned_cols=260 Identities=27% Similarity=0.453 Sum_probs=211.3
Q ss_pred CCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEc
Q 011287 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQD 116 (489)
Q Consensus 38 ~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 116 (489)
..-....++|++.+.||+|+||.||+|.+..+++.||+|.+.+.... .....+..|..++..+ .||||+++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~ 85 (296)
T cd06618 8 QKYPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGYFIT 85 (296)
T ss_pred eeccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhheeeec
Confidence 33456789999999999999999999999999999999999764322 2233444566656555 59999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 117 TFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
...+|+||||+.+ +|..++.. .+.+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.++|+|||++..
T Consensus 86 ~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~ 164 (296)
T cd06618 86 DSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGR 164 (296)
T ss_pred CCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchh
Confidence 9999999999964 77777665 4579999999999999999999997 5999999999999999999999999999876
Q ss_pred cCCccccccCCCCCCCCccceecCCcCCChhhhcCCC----CCCCCcchhhhHHHHHHhhCCCCCCCCCH-HHHHHHHHh
Q 011287 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP----ATFGNDLWALGCTLYQMLSGTSPFKDTSE-WLIFQRIIA 269 (489)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~----~~~~sDiwSLG~ilyelltG~~PF~~~~~-~~~~~~i~~ 269 (489)
+.... ......++..|+|||.+.+.. ++.++|+|||||++|+|++|+.||..... .+....+..
T Consensus 165 ~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 233 (296)
T cd06618 165 LVDSK-----------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQ 233 (296)
T ss_pred ccCCC-----------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhc
Confidence 53221 111235788999999987553 78899999999999999999999976432 344445544
Q ss_pred cC-CCCCC--CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 270 RD-IRFPN--YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 270 ~~-~~~p~--~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.. ..++. .++.++.+||.+||..||.+||++ .+++.||||..
T Consensus 234 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~-----~~il~~~~~~~ 278 (296)
T cd06618 234 EEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKY-----RELLQHPFIRR 278 (296)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCH-----HHHhcChhhhc
Confidence 33 22332 478999999999999999999998 89999999974
No 338
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.8e-39 Score=315.58 Aligned_cols=246 Identities=24% Similarity=0.405 Sum_probs=207.5
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCC---CcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDT---GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~t---g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
..++|.+.+.||+|+||.||+|.+..+ ...||+|.+.... .....+.+.+|+.+++.++||||+++++++.+. .
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~ 80 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-P 80 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-C
Confidence 457899999999999999999997654 4578999886542 133445678899999999999999999998764 5
Q ss_pred EEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 120 LYMALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.|+||||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+.|++||||||+||+++.++.++|+|||+++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 789999999999999998753 5899999999999999999999999999999999999999999999999998765432
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPN 276 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~ 276 (489)
... ......++..|+|||.+....++.++|+|||||++|+|++ |..||.+.+..+....+... ....|.
T Consensus 161 ~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 231 (270)
T cd05056 161 SYY---------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPP 231 (270)
T ss_pred cce---------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCC
Confidence 110 0112234568999999988889999999999999999986 99999988877766666554 345678
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.++..+.++|.+||..+|++||++
T Consensus 232 ~~~~~~~~li~~~l~~~P~~Rpt~ 255 (270)
T cd05056 232 NCPPTLYSLMTKCWAYDPSKRPRF 255 (270)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCH
Confidence 899999999999999999999998
No 339
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.2e-39 Score=337.59 Aligned_cols=254 Identities=21% Similarity=0.354 Sum_probs=209.1
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEc-----CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKI-----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQ 115 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~-----~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~ 115 (489)
+..++|.+++.||+|+||.||+|++. .+++.||+|++.... .......+..|+.+|.++. ||||+++++++.
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 44567999999999999999999963 356789999997542 2223345778999999997 999999999999
Q ss_pred cCCEEEEEEeccCCCChHHHHHhCC-------------------------------------------------------
Q 011287 116 DTFSLYMALESCEGGELFDQITSKG------------------------------------------------------- 140 (489)
Q Consensus 116 ~~~~lylV~E~~~gg~L~~~l~~~~------------------------------------------------------- 140 (489)
....+|+|||||.+|+|.+++.+.+
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 9999999999999999999986532
Q ss_pred -------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCee
Q 011287 141 -------------------------------------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLL 177 (489)
Q Consensus 141 -------------------------------------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNIL 177 (489)
.+++..+..++.||+.||+|||+.||+||||||+|||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiL 271 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVL 271 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEE
Confidence 2567778889999999999999999999999999999
Q ss_pred eCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCC
Q 011287 178 LTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFK 256 (489)
Q Consensus 178 l~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~ 256 (489)
++.++.++|+|||+++.+..... ........++..|+|||.+.+..++.++|+|||||++|+|++ |..||.
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSN--------YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred EeCCCEEEEEecCcceecccccc--------cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999986432210 011223467889999999998889999999999999999998 899998
Q ss_pred CCCHHHHHHHHHhc--CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 257 DTSEWLIFQRIIAR--DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 257 ~~~~~~~~~~i~~~--~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
.....+........ ....|..++.++.+|+.+||+.+|.+||++ ++|+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~-----~ell~ 394 (401)
T cd05107 344 ELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDF-----SQLVH 394 (401)
T ss_pred CCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCH-----HHHHH
Confidence 76555544443333 245677789999999999999999999998 55653
No 340
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.9e-39 Score=316.78 Aligned_cols=237 Identities=25% Similarity=0.392 Sum_probs=198.9
Q ss_pred eEEeeeCceEEEEEEEcCCCcE--EEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEEEEEecc
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTV--YALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMALESC 127 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~--vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~lylV~E~~ 127 (489)
++||+|+||.||+|++..++.. +|+|.+... ........+.+|+.++.++ +||||+++++++.....+|+||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 3689999999999999888764 588877532 1223345677899999999 8999999999999999999999999
Q ss_pred CCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccC
Q 011287 128 EGGELFDQITSKG----------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGS 191 (489)
Q Consensus 128 ~gg~L~~~l~~~~----------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~ 191 (489)
++|+|.+++.... .+++..++.++.|++.||+|||++|++||||||+||+++.++.++|+|||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999999997543 478999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc
Q 011287 192 VKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR 270 (489)
Q Consensus 192 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~ 270 (489)
+...... ........+..|+|||++....++.++|+|||||++|+|++ |..||.+.+....++.+...
T Consensus 159 ~~~~~~~-----------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~ 227 (270)
T cd05047 159 SRGQEVY-----------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 227 (270)
T ss_pred ccccchh-----------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC
Confidence 8532110 00111233567999999988889999999999999999997 99999888877777766553
Q ss_pred -CCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 271 -DIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 271 -~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
....+..++.++.+|+.+||+.||.+||++
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 258 (270)
T cd05047 228 YRLEKPLNCDDEVYDLMRQCWREKPYERPSF 258 (270)
T ss_pred CCCCCCCcCCHHHHHHHHHHcccChhhCCCH
Confidence 334666788999999999999999999998
No 341
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.1e-39 Score=331.54 Aligned_cols=255 Identities=25% Similarity=0.385 Sum_probs=205.0
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEE-----cCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKK-----IDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQ 115 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~-----~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~ 115 (489)
+..++|++++.||+|+||.||+|++ ..+++.||||++.... .......+.+|+.++.++ +||||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 3457999999999999999999985 3568899999986542 223345677899999999 6899999998776
Q ss_pred c-CCEEEEEEeccCCCChHHHHHhC-------------------------------------------------------
Q 011287 116 D-TFSLYMALESCEGGELFDQITSK------------------------------------------------------- 139 (489)
Q Consensus 116 ~-~~~lylV~E~~~gg~L~~~l~~~------------------------------------------------------- 139 (489)
. ...+|+|||||++|+|.+++...
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 4 45689999999999999998653
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCC
Q 011287 140 ------------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207 (489)
Q Consensus 140 ------------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~ 207 (489)
..++...+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~------- 234 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------- 234 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-------
Confidence 1367788899999999999999999999999999999999999999999999876532210
Q ss_pred CCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHH-HHh-cCCCCCCCCCHHHHH
Q 011287 208 SDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQR-IIA-RDIRFPNYFSDAARD 284 (489)
Q Consensus 208 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~-i~~-~~~~~p~~~~~~~~~ 284 (489)
........++..|+|||.+.+..++.++|+|||||++|+|++ |..||........+.. +.. .....|...++++.+
T Consensus 235 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (343)
T cd05103 235 -YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 313 (343)
T ss_pred -hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHH
Confidence 011122345678999999998889999999999999999997 9999987543332222 222 234556678899999
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcC
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMH 311 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~h 311 (489)
++.+||+.||++||++ .++++|
T Consensus 314 ~~~~cl~~~p~~Rps~-----~eil~~ 335 (343)
T cd05103 314 TMLDCWHGEPSQRPTF-----SELVEH 335 (343)
T ss_pred HHHHHccCChhhCcCH-----HHHHHH
Confidence 9999999999999998 667654
No 342
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.6e-39 Score=316.72 Aligned_cols=250 Identities=16% Similarity=0.275 Sum_probs=208.8
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcC----CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc-
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKID----TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD- 116 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~----tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~- 116 (489)
...++|++.+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|..+++.++||||+++++++.+
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 456899999999999999999999876 3688999988643 233445667889999999999999999997655
Q ss_pred CCEEEEEEeccCCCChHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEee
Q 011287 117 TFSLYMALESCEGGELFDQITSK--------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIAD 188 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~--------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~D 188 (489)
....+++++|+.+|+|.+++... ..+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 57789999999999999998763 3589999999999999999999999999999999999999999999999
Q ss_pred ccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHH
Q 011287 189 FGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRI 267 (489)
Q Consensus 189 FG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i 267 (489)
||+++.+....... ......++..|+|||++.+..++.++|||||||++|++++ |++||...+.......+
T Consensus 161 ~g~~~~~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 232 (280)
T cd05043 161 NALSRDLFPMDYHC--------LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYL 232 (280)
T ss_pred CCCcccccCCceEE--------eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence 99998654332111 0112245678999999998889999999999999999999 99999988877766555
Q ss_pred Hhc-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 268 IAR-DIRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 268 ~~~-~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
... .+..+..+++++.+++.+||..||++||++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 267 (280)
T cd05043 233 KDGYRLAQPINCPDELFAVMACCWALDPEERPSFS 267 (280)
T ss_pred HcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHH
Confidence 443 2234556789999999999999999999983
No 343
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5e-39 Score=310.78 Aligned_cols=238 Identities=22% Similarity=0.400 Sum_probs=201.6
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGG 130 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg 130 (489)
++||+|+||.||+|... ++..||+|++.... .......+.+|+.+++.++||||+++++++.+....++||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 47899999999999864 68899999986542 2223345778999999999999999999999999999999999999
Q ss_pred ChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCC
Q 011287 131 ELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASD 209 (489)
Q Consensus 131 ~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~ 209 (489)
+|.+++... +.+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........
T Consensus 78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--------- 148 (250)
T cd05085 78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY--------- 148 (250)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccc---------
Confidence 999998754 4689999999999999999999999999999999999999999999999999865322110
Q ss_pred CCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCCCHHHHHHHH
Q 011287 210 DKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYFSDAARDLID 287 (489)
Q Consensus 210 ~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~Li~ 287 (489)
.......++..|+|||++....++.++|+|||||++|+|++ |..||.+.+.......+... ...+|..++..+.+|+.
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 228 (250)
T cd05085 149 SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQ 228 (250)
T ss_pred ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence 01112234567999999998889999999999999999998 99999988877766666554 34567778999999999
Q ss_pred HhhccCCCCCCCC
Q 011287 288 RLLDVDPSGRPGA 300 (489)
Q Consensus 288 ~~L~~dP~~R~t~ 300 (489)
+||+.+|++||++
T Consensus 229 ~~l~~~p~~Rp~~ 241 (250)
T cd05085 229 RCWDYKPENRPKF 241 (250)
T ss_pred HHcccCcccCCCH
Confidence 9999999999998
No 344
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.6e-39 Score=317.42 Aligned_cols=246 Identities=21% Similarity=0.329 Sum_probs=197.4
Q ss_pred CCe-EEeeEEeeeCceEEEEEE----EcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc--C
Q 011287 45 QDF-ELGKIYGVGSYSKVVRAK----KIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD--T 117 (489)
Q Consensus 45 ~dy-~~~~~LG~G~~g~Vy~a~----~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 117 (489)
++| ++.+.||+|+||+||++. ...++..||+|++..... ......+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG 80 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 345 999999999999998865 345788999999865421 2234557789999999999999999998765 3
Q ss_pred CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 118 FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
..+|+||||+++++|.+++... .+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++..+..
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 4689999999999999999764 699999999999999999999999999999999999999999999999999986543
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHH--------------H
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWL--------------I 263 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~--------------~ 263 (489)
.... ........++..|+|||.+.+..++.++|||||||++|+|++|..||....... .
T Consensus 160 ~~~~-------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05080 160 GHEY-------YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVR 232 (283)
T ss_pred cchh-------hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhh
Confidence 2110 001112245667999999988889999999999999999999999986543210 0
Q ss_pred HHHHHh--cCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 264 FQRIIA--RDIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 264 ~~~i~~--~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
...... .....|..++.++.+++.+||+.||++||++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~ 271 (283)
T cd05080 233 LIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF 271 (283)
T ss_pred hhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCH
Confidence 111111 1223466789999999999999999999998
No 345
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4.3e-39 Score=311.66 Aligned_cols=248 Identities=24% Similarity=0.386 Sum_probs=212.5
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCC----cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTG----TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg----~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
|++.+.||.|+||.||+|++..++ ..||+|++..... ......+..|+.+++.++|+||+++++.+.+....|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 467899999999999999998766 9999999865422 1145667889999999999999999999999999999
Q ss_pred EEeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 123 ALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~--l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
+|||+++++|.+++..... +++..+..++.|++.||.+||+.|++||||||+||+++.++.++|+|||++........
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 9999999999999986544 99999999999999999999999999999999999999999999999999986544311
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC-CCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD-IRFPNYF 278 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~-~~~p~~~ 278 (489)
.. .....++..|+|||.+....++.++|+|||||++|+|++ |.+||...+.....+.+.... ...+..+
T Consensus 159 ~~---------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (258)
T smart00219 159 YK---------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENC 229 (258)
T ss_pred cc---------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcC
Confidence 10 001226789999999988889999999999999999998 899999888887777776543 3456678
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
+.++.+++.+||+.||++|||+ .++++
T Consensus 230 ~~~~~~~i~~~l~~~p~~Rpt~-----~~ll~ 256 (258)
T smart00219 230 PPEIYKLMLQCWAEDPEDRPTF-----SELVE 256 (258)
T ss_pred CHHHHHHHHHHCcCChhhCcCH-----HHHHh
Confidence 9999999999999999999998 66653
No 346
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=6.2e-40 Score=319.43 Aligned_cols=237 Identities=20% Similarity=0.314 Sum_probs=197.4
Q ss_pred eEEeeeCceEEEEEEEcCCCc-------EEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 51 KIYGVGSYSKVVRAKKIDTGT-------VYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~-------~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
+.||+|+||.||+|.+..++. .||+|.+.+.. ......+..|..+++.++||||+++++++......++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 468999999999999876554 48888875432 23345567789999999999999999999998999999
Q ss_pred EeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCC--------EEEeeccCccc
Q 011287 124 LESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH--------IKIADFGSVKP 194 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~--------ikL~DFG~a~~ 194 (489)
|||+.+|+|..++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++. ++++|||.+..
T Consensus 78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 99999999999997654 5899999999999999999999999999999999999988765 69999998764
Q ss_pred cCCccccccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhC-CCCCCCCCHHHHHHHHHhcCC
Q 011287 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSG-TSPFKDTSEWLIFQRIIARDI 272 (489)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG-~~PF~~~~~~~~~~~i~~~~~ 272 (489)
... .....++..|+|||++.+. .++.++|+|||||++|+|++| .+||...+..... .+.....
T Consensus 158 ~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~ 222 (258)
T cd05078 158 VLP--------------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-QFYEDRH 222 (258)
T ss_pred cCC--------------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-HHHHccc
Confidence 322 1245688899999999764 578999999999999999998 5777665554433 3445566
Q ss_pred CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 273 RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 273 ~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
.+|...+.++.+||.+||+.||++||++ +++++
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rps~-----~~il~ 255 (258)
T cd05078 223 QLPAPKWTELANLINQCMDYEPDFRPSF-----RAIIR 255 (258)
T ss_pred cCCCCCcHHHHHHHHHHhccChhhCCCH-----HHHHH
Confidence 7888888999999999999999999998 66654
No 347
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-40 Score=358.20 Aligned_cols=262 Identities=32% Similarity=0.490 Sum_probs=207.6
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEE------------
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLF------------ 111 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~------------ 111 (489)
..||+.+++||+||||.||+|+++-+|+.||||.+.... .......+.+|+.+|.+|+|||||++|
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 578999999999999999999999999999999997664 444566788999999999999999998
Q ss_pred ------------------------------------------------EEEE----------------------------
Q 011287 112 ------------------------------------------------FTFQ---------------------------- 115 (489)
Q Consensus 112 ------------------------------------------------~~~~---------------------------- 115 (489)
.++.
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0000
Q ss_pred -----------------------cC--------CEEEEEEeccCCCChHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHh
Q 011287 116 -----------------------DT--------FSLYMALESCEGGELFDQITSKGHL-SEDEARFYTAEVVDALEYIHS 163 (489)
Q Consensus 116 -----------------------~~--------~~lylV~E~~~gg~L~~~l~~~~~l-~e~~~~~i~~qil~aL~~LH~ 163 (489)
.+ ..+|+-||||+.-.|.+++.++... ....++.+++||++||.|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 01 3589999999986666666654333 488999999999999999999
Q ss_pred CCcEeeccCCCCeeeCCCCCEEEeeccCccccCC----ccccccC----CCCCCCCccceecCCcCCChhhhcCCC---C
Q 011287 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD----SRITVLP----NAASDDKACTFVGTAAYVPPEVLNSSP---A 232 (489)
Q Consensus 164 ~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~----~~~~~~~----~~~~~~~~~~~~gt~~Y~aPE~l~~~~---~ 232 (489)
.|||||||||.|||++++++|||+|||+|+.... ......+ .........+.+||..|+|||++.+.. |
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Y 795 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKY 795 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccc
Confidence 9999999999999999999999999999987321 0000000 011223456789999999999997655 9
Q ss_pred CCCCcchhhhHHHHHHhhCCCCCCCCCHH-HHHHHHHhcCCCCCCC----CCHHHHHHHHHhhccCCCCCCCCCCCCHHH
Q 011287 233 TFGNDLWALGCTLYQMLSGTSPFKDTSEW-LIFQRIIARDIRFPNY----FSDAARDLIDRLLDVDPSGRPGAGPGGYAV 307 (489)
Q Consensus 233 ~~~sDiwSLG~ilyelltG~~PF~~~~~~-~~~~~i~~~~~~~p~~----~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~ 307 (489)
+.|+|+||||+|+|||+. ||...-+. .++..+..+.+++|.. --+.-..+|++||+.||++|||| .+
T Consensus 796 n~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA-----~e 867 (1351)
T KOG1035|consen 796 NSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTA-----TE 867 (1351)
T ss_pred cchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCH-----HH
Confidence 999999999999999983 57654433 3455555555555532 24567889999999999999999 89
Q ss_pred HhcCCCCC
Q 011287 308 LKMHPFFK 315 (489)
Q Consensus 308 l~~hpff~ 315 (489)
++++.||-
T Consensus 868 LL~s~llp 875 (1351)
T KOG1035|consen 868 LLNSELLP 875 (1351)
T ss_pred HhhccCCC
Confidence 99999986
No 348
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.1e-39 Score=318.05 Aligned_cols=249 Identities=32% Similarity=0.511 Sum_probs=208.3
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCCEEEEEEe
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~lylV~E 125 (489)
|.+.+.||+|++|.||+|+...+++.||||.+.+..... ......+|...+++++ ||||+++++.+.+....|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW--EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch--hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 789999999999999999999999999999987653221 2223446888999998 9999999999999999999999
Q ss_pred ccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 126 SCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
|+ +|+|.+++.... .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~----- 152 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR----- 152 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-----
Confidence 99 779999888764 7899999999999999999999999999999999999999999999999998754321
Q ss_pred CCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC-----------
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD----------- 271 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~----------- 271 (489)
.......|+..|+|||++.. ..++.++|+|||||++++|++|++||...+....+.++...-
T Consensus 153 ------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd07830 153 ------PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEG 226 (283)
T ss_pred ------CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhH
Confidence 11224568899999998854 457899999999999999999999998887766555443210
Q ss_pred --------CCC-----------CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 272 --------IRF-----------PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 272 --------~~~-----------p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
..+ ....+.++.+||++||+.||++||++ .+++.||||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~ei~~~~~~ 283 (283)
T cd07830 227 YKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTA-----SQALQHPYF 283 (283)
T ss_pred hhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCH-----HHHhhCCCC
Confidence 000 11236889999999999999999998 899999998
No 349
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4.9e-39 Score=312.01 Aligned_cols=237 Identities=24% Similarity=0.417 Sum_probs=202.3
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
..++|++.+.||+|+||.||++.. +++.||+|.+... .....+.+|+.+++.++||||+++++++... ..|+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~-----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCD-----VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCc-----chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 457899999999999999999864 7889999998543 1234577899999999999999999998765 4799
Q ss_pred EEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 123 ALESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
||||+.+++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-- 153 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-- 153 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc--
Confidence 999999999999997653 4899999999999999999999999999999999999999999999999998753211
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYF 278 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~ 278 (489)
......+..|+|||.+.+..++.++|+|||||++|+|++ |++||...+.......+... ....+..+
T Consensus 154 -----------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (254)
T cd05083 154 -----------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGC 222 (254)
T ss_pred -----------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcC
Confidence 112234567999999988889999999999999999997 99999988877766665543 23345678
Q ss_pred CHHHHHHHHHhhccCCCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
+..+.+++.+||+.+|.+||++
T Consensus 223 ~~~~~~li~~~l~~~p~~Rp~~ 244 (254)
T cd05083 223 PADVYVLMTSCWETEPKKRPSF 244 (254)
T ss_pred CHHHHHHHHHHcCCChhhCcCH
Confidence 9999999999999999999998
No 350
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.9e-39 Score=314.24 Aligned_cols=240 Identities=24% Similarity=0.396 Sum_probs=202.0
Q ss_pred eEEeeeCceEEEEEEEcCCC------cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 51 KIYGVGSYSKVVRAKKIDTG------TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg------~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
+.||+|+||.||+|++...+ ..+|+|.+.+... ......+.+|..+++.++||||+++++++.+....|+||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 46899999999999986544 7899998865421 223455777999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC-----CEEEeeccCc
Q 011287 125 ESCEGGELFDQITSK-------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG-----HIKIADFGSV 192 (489)
Q Consensus 125 E~~~gg~L~~~l~~~-------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g-----~ikL~DFG~a 192 (489)
||+++++|.+++.+. ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 999999999999742 3478899999999999999999999999999999999999887 8999999998
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR- 270 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~- 270 (489)
+........ .......++..|+|||.+.+..++.++|||||||++|+|++ |..||...+.......+...
T Consensus 159 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~ 230 (269)
T cd05044 159 RDIYKSDYY--------RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG 230 (269)
T ss_pred ccccccccc--------ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC
Confidence 765332110 11123356788999999999899999999999999999998 99999988877776665543
Q ss_pred CCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 271 DIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 271 ~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.+..+..++..+.+||.+||+.+|.+||++
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~ 260 (269)
T cd05044 231 RLQKPENCPDKIYQLMTNCWAQDPSERPTF 260 (269)
T ss_pred ccCCcccchHHHHHHHHHHcCCCcccCCCH
Confidence 346677889999999999999999999998
No 351
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.2e-38 Score=314.32 Aligned_cols=247 Identities=20% Similarity=0.335 Sum_probs=198.7
Q ss_pred CCCeEEeeEEeeeCceEEEEEE----EcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEE--cC
Q 011287 44 IQDFELGKIYGVGSYSKVVRAK----KIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQ--DT 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~----~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~ 117 (489)
-++|++.+.||+|+||.||+|. +..++..||+|.+... .......+.+|+.+++.++||||+++++++. +.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 3689999999999999999998 4457899999998654 2344566788999999999999999998764 34
Q ss_pred CEEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 118 FSLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
..+|+||||+++|+|.+++.+. +.+++..+..++.|++.||.|||++||+||||||+||+++.+++++|+|||++..+.
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 5689999999999999999764 468999999999999999999999999999999999999999999999999998654
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHH--------------
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWL-------------- 262 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~-------------- 262 (489)
...... .......++..|+|||++.+..++.++|+|||||++|+|++|..|+.......
T Consensus 160 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd05081 160 QDKEYY-------KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIV 232 (284)
T ss_pred CCCcce-------eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccch
Confidence 321100 00011223456999999998889999999999999999999987765432211
Q ss_pred -HHHHHHhc--CCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 263 -IFQRIIAR--DIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 263 -~~~~i~~~--~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.+..+... .+..+..++.++.+||.+||+.+|++|||+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~ 273 (284)
T cd05081 233 YHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSF 273 (284)
T ss_pred HHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCH
Confidence 01112222 223456788999999999999999999999
No 352
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.1e-39 Score=315.28 Aligned_cols=247 Identities=30% Similarity=0.502 Sum_probs=204.9
Q ss_pred EEeeEEeeeCceEEEEEEEc----CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 48 ELGKIYGVGSYSKVVRAKKI----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 48 ~~~~~LG~G~~g~Vy~a~~~----~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.+.+.||.|+||.||+|... ..+..|+||++... ........+.+|...+++++||||+++++++.....+++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 57899999999999999997 45788999999442 2333466778899999999999999999999988889999
Q ss_pred EeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 124 LESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
||||++|+|.+++... ..+++.....++.||+.||.|||+++++|+||+++||+++.++.+||+|||++........
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 9999999999999986 6799999999999999999999999999999999999999999999999999986522111
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC-CCCCCCCC
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD-IRFPNYFS 279 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~-~~~p~~~~ 279 (489)
........+...|+|||.+....++.++||||||+++|||++ |+.||...+...+...+.... ..+|..++
T Consensus 159 -------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (259)
T PF07714_consen 159 -------YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCP 231 (259)
T ss_dssp -------EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSB
T ss_pred -------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccchh
Confidence 011223356778999999998889999999999999999999 789999998888887775543 34677899
Q ss_pred HHHHHHHHHhhccCCCCCCCCCCCCHHHHh
Q 011287 280 DAARDLIDRLLDVDPSGRPGAGPGGYAVLK 309 (489)
Q Consensus 280 ~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~ 309 (489)
..+.++|.+||..||.+||++ .+++
T Consensus 232 ~~~~~li~~C~~~~p~~RPs~-----~~i~ 256 (259)
T PF07714_consen 232 KDIYSLIQQCWSHDPEKRPSF-----QEIL 256 (259)
T ss_dssp HHHHHHHHHHT-SSGGGS--H-----HHHH
T ss_pred HHHHHHHHHHcCCChhhCcCH-----HHHH
Confidence 999999999999999999998 6664
No 353
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=9.4e-39 Score=312.24 Aligned_cols=237 Identities=21% Similarity=0.274 Sum_probs=193.7
Q ss_pred eEEeeeCceEEEEEEEcC------------CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC
Q 011287 51 KIYGVGSYSKVVRAKKID------------TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF 118 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~------------tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~ 118 (489)
+.||+|+||.||+|+... ....+|+|++... .......+.+|..+++.++||||+++++++.+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 468999999999998532 2346888987653 2333445677889999999999999999999999
Q ss_pred EEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCC-------EEEeecc
Q 011287 119 SLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH-------IKIADFG 190 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~-------ikL~DFG 190 (489)
..++||||+++|+|..++.+. +.+++..+..++.||+.||.|||++||+||||||+|||++.++. ++++|||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 999999999999998888754 56999999999999999999999999999999999999987664 8999999
Q ss_pred CccccCCccccccCCCCCCCCccceecCCcCCChhhhc-CCCCCCCCcchhhhHHHHHHh-hCCCCCCCCCHHHHHHHHH
Q 011287 191 SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLN-SSPATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRII 268 (489)
Q Consensus 191 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-~~~~~~~sDiwSLG~ilyell-tG~~PF~~~~~~~~~~~i~ 268 (489)
++..... .....|+..|+|||.+. +..++.++|||||||++|+|+ +|..||......+. ....
T Consensus 158 ~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-~~~~ 222 (262)
T cd05077 158 IPITVLS--------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-ERFY 222 (262)
T ss_pred CCccccC--------------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-HHHH
Confidence 9864421 12346788999999986 466899999999999999997 59999987654433 2333
Q ss_pred hcCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 269 ARDIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 269 ~~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
..........++++.+||.+||+.||++||+. .+|+.
T Consensus 223 ~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~-----~~il~ 259 (262)
T cd05077 223 EGQCMLVTPSCKELADLMTHCMNYDPNQRPFF-----RAIMR 259 (262)
T ss_pred hcCccCCCCChHHHHHHHHHHcCCChhhCcCH-----HHHHH
Confidence 44444445567889999999999999999998 67764
No 354
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=9.8e-39 Score=315.40 Aligned_cols=252 Identities=20% Similarity=0.314 Sum_probs=202.4
Q ss_pred CCeEEeeEEeeeCceEEEEEEE----cCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC--C
Q 011287 45 QDFELGKIYGVGSYSKVVRAKK----IDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT--F 118 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~----~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--~ 118 (489)
.-|++++.||+|+||.||+|+. ..++..||+|.+.... .......+.+|+.+++.++||||+++++++.+. .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 3579999999999999999984 4578999999986442 233345688899999999999999999998875 6
Q ss_pred EEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 119 SLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
..|+||||++|++|.+++.+. ..+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++..+..
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 789999999999999999765 3589999999999999999999999999999999999999999999999999986543
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH--------------HHH
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE--------------WLI 263 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~--------------~~~ 263 (489)
.... ........|+..|+|||++.+..++.++|||||||++|+|+++..|+..... ...
T Consensus 162 ~~~~-------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05079 162 DKEY-------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTR 234 (284)
T ss_pred Cccc-------eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHH
Confidence 2110 0111235677889999999888899999999999999999998776533211 011
Q ss_pred HHHHHh--cCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 264 FQRIIA--RDIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 264 ~~~i~~--~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
...... .....+..++..+.+||.+||+.||.+||++ .++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~-----~~il~ 278 (284)
T cd05079 235 LVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTF-----QNLIE 278 (284)
T ss_pred HHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCH-----HHHHH
Confidence 111111 1233456789999999999999999999998 55653
No 355
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.5e-38 Score=317.40 Aligned_cols=248 Identities=18% Similarity=0.341 Sum_probs=204.4
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCc----EEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGT----VYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~----~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
+..++|+..+.||+|+||.||+|++..+|. .||+|.+.... .......+.+|..+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 456899999999999999999999988776 46888875432 222334577899999999999999999988764
Q ss_pred CEEEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 118 FSLYMALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
..++++||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccccccc
Confidence 4679999999999999988753 68999999999999999999999999999999999999999999999999998654
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCC
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRF 274 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~ 274 (489)
.... ........++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.........+... .+..
T Consensus 161 ~~~~--------~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd05110 161 GDEK--------EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQ 232 (303)
T ss_pred Cccc--------ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCC
Confidence 3211 011112345778999999998889999999999999999997 99999887665544443332 2334
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 275 PNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 275 p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
+...+..+.+++.+|+..||++||++
T Consensus 233 ~~~~~~~~~~li~~c~~~~p~~Rp~~ 258 (303)
T cd05110 233 PPICTIDVYMVMVKCWMIDADSRPKF 258 (303)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 55678999999999999999999998
No 356
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.9e-38 Score=308.79 Aligned_cols=242 Identities=21% Similarity=0.354 Sum_probs=197.1
Q ss_pred eEEeeeCceEEEEEEEcC---CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEE-cCCEEEEEEec
Q 011287 51 KIYGVGSYSKVVRAKKID---TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQ-DTFSLYMALES 126 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~---tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~lylV~E~ 126 (489)
+.||+|+||.||+|.+.. .+..||+|.+... ........+.+|..+++.++||||+++++++. .+...|+||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 468999999999999754 3467999987532 22334556778999999999999999999765 45668999999
Q ss_pred cCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 127 CEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 127 ~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
+.+|+|.+++.+. ..+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||+++.+.......
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~--- 155 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS--- 155 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCccee---
Confidence 9999999999764 457788889999999999999999999999999999999999999999999987653321100
Q ss_pred CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC-CCCCCCCCHHHH
Q 011287 206 AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD-IRFPNYFSDAAR 283 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~-~~~p~~~~~~~~ 283 (489)
........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+.......+.... ...|..+++.+.
T Consensus 156 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (262)
T cd05058 156 ---VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLY 232 (262)
T ss_pred ---ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHH
Confidence 011122345778999999988889999999999999999999 678888877777666655443 345667899999
Q ss_pred HHHHHhhccCCCCCCCC
Q 011287 284 DLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 284 ~Li~~~L~~dP~~R~t~ 300 (489)
+++.+||..+|++||++
T Consensus 233 ~li~~cl~~~p~~Rp~~ 249 (262)
T cd05058 233 EVMLSCWHPKPEMRPTF 249 (262)
T ss_pred HHHHHHcCCChhhCCCH
Confidence 99999999999999998
No 357
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-40 Score=331.65 Aligned_cols=236 Identities=24% Similarity=0.467 Sum_probs=206.9
Q ss_pred EEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEecc
Q 011287 48 ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESC 127 (489)
Q Consensus 48 ~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~ 127 (489)
.-++-||.|+.|.||+|+. .++.||||.++. .-..++..|++|+||||+.+.+++.....+++|||||
T Consensus 127 sELeWlGSGaQGAVF~Grl--~netVAVKKV~e----------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRL--HNETVAVKKVRE----------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhhhhccCcccceeeeec--cCceehhHHHhh----------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence 4466789999999999998 478999997631 1234788899999999999999999999999999999
Q ss_pred CCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCC
Q 011287 128 EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207 (489)
Q Consensus 128 ~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~ 207 (489)
..|.|..+|+....++......|..+|+.|+.|||.++|||||||.-||||+.+..|||+|||.++.+...
T Consensus 195 a~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--------- 265 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--------- 265 (904)
T ss_pred ccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc--CCCCCCCCCHHHHHH
Q 011287 208 SDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR--DIRFPNYFSDAARDL 285 (489)
Q Consensus 208 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~L 285 (489)
...-+|+||..|||||++...+++.++|||||||+|+|||||..||...+...++.-+-.+ .+..|..+|+.++=|
T Consensus 266 --STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL 343 (904)
T KOG4721|consen 266 --STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLL 343 (904)
T ss_pred --hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHH
Confidence 3445899999999999999999999999999999999999999999887665543322222 355678899999999
Q ss_pred HHHhhccCCCCCCCCCCCCHHHHhcC
Q 011287 286 IDRLLDVDPSGRPGAGPGGYAVLKMH 311 (489)
Q Consensus 286 i~~~L~~dP~~R~t~~~~~~~~l~~h 311 (489)
|+.|++-.|..||+. .+++.|
T Consensus 344 ~Kqcw~sKpRNRPSF-----rqil~H 364 (904)
T KOG4721|consen 344 LKQCWNSKPRNRPSF-----RQILLH 364 (904)
T ss_pred HHHHHhcCCCCCccH-----HHHHHH
Confidence 999999999999987 556655
No 358
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=9.8e-39 Score=314.30 Aligned_cols=236 Identities=20% Similarity=0.271 Sum_probs=193.5
Q ss_pred EEeeeCceEEEEEEEcCC------------------------CcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCc
Q 011287 52 IYGVGSYSKVVRAKKIDT------------------------GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGV 107 (489)
Q Consensus 52 ~LG~G~~g~Vy~a~~~~t------------------------g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnI 107 (489)
.||+|+||.||+|....+ ...||+|++.... ......+.+|..+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence 689999999999985322 2458899886542 2233456678889999999999
Q ss_pred cEEEEEEEcCCEEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC----
Q 011287 108 VRLFFTFQDTFSLYMALESCEGGELFDQITS-KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG---- 182 (489)
Q Consensus 108 v~l~~~~~~~~~lylV~E~~~gg~L~~~l~~-~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g---- 182 (489)
+++++++.+....|+||||+++|+|..++.+ .+.+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccC
Confidence 9999999999999999999999999998875 46799999999999999999999999999999999999998654
Q ss_pred ---CEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHH-hhCCCCCCC
Q 011287 183 ---HIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQM-LSGTSPFKD 257 (489)
Q Consensus 183 ---~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyel-ltG~~PF~~ 257 (489)
.++++|||++...... ....++..|+|||.+.+ ..++.++|+|||||++|+| ++|..||.+
T Consensus 159 ~~~~~kl~d~g~~~~~~~~--------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~ 224 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR--------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKE 224 (274)
T ss_pred ccceeeecCCccccccccc--------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccc
Confidence 3899999987643211 12357788999998865 5588999999999999998 479999988
Q ss_pred CCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 258 TSEWLIFQRIIARDIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 258 ~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
....... ........+|...++.+.++|.+||+.+|++||++ .++++
T Consensus 225 ~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~-----~~il~ 271 (274)
T cd05076 225 RTPSEKE-RFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSF-----RTILR 271 (274)
T ss_pred cChHHHH-HHHHhccCCCCCCChHHHHHHHHHcccChhhCcCH-----HHHHH
Confidence 7655442 33444556677778899999999999999999988 66764
No 359
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.1e-38 Score=309.02 Aligned_cols=239 Identities=22% Similarity=0.360 Sum_probs=191.2
Q ss_pred eEEeeeCceEEEEEEEcC--CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccC
Q 011287 51 KIYGVGSYSKVVRAKKID--TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCE 128 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~--tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~ 128 (489)
+.||+|+||.||+|.... ....+|+|.+.... .......+.+|+.+++.++||||+++++.+.+....|+||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 368999999999997533 44578888765432 23334556779999999999999999999999999999999999
Q ss_pred CCChHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 129 GGELFDQITSKG-----HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 129 gg~L~~~l~~~~-----~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
+|+|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 156 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY-- 156 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchhe--
Confidence 999999997642 2467888999999999999999999999999999999999999999999998654322110
Q ss_pred CCCCCCCCccceecCCcCCChhhhcC-------CCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CC--
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNS-------SPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DI-- 272 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~-------~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~-- 272 (489)
.......++..|+|||++.. ..++.++|||||||++|+|++ |.+||....+.+....+... ..
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 230 (269)
T cd05042 157 ------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKL 230 (269)
T ss_pred ------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccC
Confidence 01123356778999999743 346789999999999999999 89999888776665554432 22
Q ss_pred ---CCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 273 ---RFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 273 ---~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
..+..++....+++..|+ .||++||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~ 260 (269)
T cd05042 231 PKPQLDLKYSDRWYEVMQFCW-LDPETRPTA 260 (269)
T ss_pred CCCcccccCCHHHHHHHHHHh-cCcccccCH
Confidence 234467899999999998 599999998
No 360
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.2e-38 Score=310.27 Aligned_cols=245 Identities=21% Similarity=0.372 Sum_probs=202.8
Q ss_pred eEEeeEEeeeCceEEEEEEEc---CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC-----
Q 011287 47 FELGKIYGVGSYSKVVRAKKI---DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF----- 118 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~---~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 118 (489)
|.+.+.||+|+||.||+|... .+++.||||++..... .......+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF-SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC-ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 678899999999999999864 3578999999965432 3334556778999999999999999999886432
Q ss_pred -EEEEEEeccCCCChHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccC
Q 011287 119 -SLYMALESCEGGELFDQITSK------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGS 191 (489)
Q Consensus 119 -~lylV~E~~~gg~L~~~l~~~------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~ 191 (489)
..+++++|+.+|+|..++... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 347899999999998877532 2478999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc
Q 011287 192 VKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR 270 (489)
Q Consensus 192 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~ 270 (489)
++....... ........+++.|++||.+....++.++|||||||++|+|++ |.+||.+.+....+..+...
T Consensus 160 ~~~~~~~~~--------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 231 (273)
T cd05074 160 SKKIYSGDY--------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG 231 (273)
T ss_pred cccccCCcc--------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC
Confidence 886533211 011123345678999999998889999999999999999999 99999988877776666544
Q ss_pred -CCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 271 -DIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 271 -~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
....+...+..+.+++.+||+.+|++||++
T Consensus 232 ~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~ 262 (273)
T cd05074 232 NRLKQPPDCLEDVYELMCQCWSPEPKCRPSF 262 (273)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence 344566788999999999999999999998
No 361
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=329.31 Aligned_cols=250 Identities=27% Similarity=0.438 Sum_probs=215.8
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCc---E-EEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGT---V-YALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT 117 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~---~-vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 117 (489)
+..++-.+.+.||+|+||.||+|+.+..+. . ||+|...............+..|+++|+.++|||||++|++..++
T Consensus 154 l~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~ 233 (474)
T KOG0194|consen 154 LSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE 233 (474)
T ss_pred EeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC
Confidence 455677888999999999999999865422 3 899998764444455667788899999999999999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 118 FSLYMALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
..+|+|||+|.||+|.+++++.+ .++..+...++.+.+.||+|||+++++||||-..|+|++.++.+||+|||+++.-.
T Consensus 234 ~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 234 EPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred CccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 99999999999999999999987 49999999999999999999999999999999999999999999999999987532
Q ss_pred CccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcCC--C
Q 011287 197 DSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARDI--R 273 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~~--~ 273 (489)
.... ....---...|+|||.+....++.++||||+||++||+++ |..||.+.+..++.++|....+ .
T Consensus 314 ~~~~----------~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~ 383 (474)
T KOG0194|consen 314 QYVM----------KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMP 383 (474)
T ss_pred ceee----------ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCC
Confidence 1110 0001123467999999999999999999999999999999 8999999999999999966554 4
Q ss_pred CCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 274 FPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 274 ~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
+|...|.++..++.+|+..||++||++.
T Consensus 384 ~~~~~p~~~~~~~~~c~~~~p~~R~tm~ 411 (474)
T KOG0194|consen 384 IPSKTPKELAKVMKQCWKKDPEDRPTMS 411 (474)
T ss_pred CCCCCHHHHHHHHHHhccCChhhccCHH
Confidence 5677899999999999999999999984
No 362
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.5e-38 Score=308.04 Aligned_cols=239 Identities=20% Similarity=0.297 Sum_probs=191.1
Q ss_pred eEEeeeCceEEEEEEEc--CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccC
Q 011287 51 KIYGVGSYSKVVRAKKI--DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCE 128 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~--~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~ 128 (489)
+.||+|+||.||+|... .++..+|+|.+..... ......+.+|+.+++.++||||+++++.+.+...+|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 46899999999999864 3567899998865432 2233457779999999999999999999999999999999999
Q ss_pred CCChHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 129 GGELFDQITSKG-----HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 129 gg~L~~~l~~~~-----~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
+|+|.+++.... .+++..++.++.|++.||+|||+.|++||||||+||+++.+++++|+|||+++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~-- 156 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY-- 156 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCccee--
Confidence 999999987532 3577788899999999999999999999999999999999999999999998754322110
Q ss_pred CCCCCCCCccceecCCcCCChhhhcCC-------CCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHh-cCCCC
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVLNSS-------PATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIA-RDIRF 274 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~-------~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~-~~~~~ 274 (489)
.......|+..|+|||++.+. .++.++|+|||||++|+|++ |+.||......+....... ....+
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 230 (269)
T cd05087 157 ------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKL 230 (269)
T ss_pred ------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCC
Confidence 111234678899999998642 35789999999999999996 9999987766654433322 22222
Q ss_pred -----CCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 275 -----PNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 275 -----p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
+...++.+.+++++|+ .+|++||++
T Consensus 231 ~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~ 260 (269)
T cd05087 231 PKPRLKLPLSDRWYEVMQFCW-LQPEQRPSA 260 (269)
T ss_pred CCCccCCCCChHHHHHHHHHh-cCcccCCCH
Confidence 2356889999999998 689999999
No 363
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.5e-38 Score=312.25 Aligned_cols=260 Identities=18% Similarity=0.207 Sum_probs=196.0
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCC---CcEEEEEEeecccccc--hhH------HHHHHHHHHHHHhCCCCCcc
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDT---GTVYALKIMDKKFITK--ENK------TAYVKLERIVLDQLDHPGVV 108 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~t---g~~vAiK~~~k~~~~~--~~~------~~~~~~E~~il~~l~hpnIv 108 (489)
....-++|++.+.||+|+||.||+|++..+ +..+|+|+........ +.. ......+...+..+.|++|+
T Consensus 7 ~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~ 86 (294)
T PHA02882 7 IDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIP 86 (294)
T ss_pred eccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence 344557899999999999999999999887 7778888654321110 100 00111233345567899999
Q ss_pred EEEEEEEcCC----EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCE
Q 011287 109 RLFFTFQDTF----SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHI 184 (489)
Q Consensus 109 ~l~~~~~~~~----~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~i 184 (489)
++++...... ..|++++++.. ++.+.+.....+++..++.++.|++.||+|||+.||+||||||+|||++.++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 87 KYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred cEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence 9998765432 45788888754 777777766668899999999999999999999999999999999999999999
Q ss_pred EEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH-H--
Q 011287 185 KIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE-W-- 261 (489)
Q Consensus 185 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~-~-- 261 (489)
+|+|||+|+.+........ ..........||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+. .
T Consensus 166 ~l~DFGla~~~~~~~~~~~---~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIE---YSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred EEEEcCCceeeccCCcccc---cccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 9999999987643221110 011223345799999999999999999999999999999999999999987632 1
Q ss_pred ------HHHHHHHhcCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHh
Q 011287 262 ------LIFQRIIARDIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLK 309 (489)
Q Consensus 262 ------~~~~~i~~~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~ 309 (489)
+...++......+ ...++.+.++++.|+..+|++||+. ++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~rp~~-----~~l~ 290 (294)
T PHA02882 243 IHAAKCDFIKRLHEGKIKI-KNANKFIYDFIECVTKLSYEEKPDY-----DALI 290 (294)
T ss_pred HHHhHHHHHHHhhhhhhcc-CCCCHHHHHHHHHHHhCCCCCCCCH-----HHHH
Confidence 1223333333333 3468999999999999999999987 5665
No 364
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-41 Score=309.46 Aligned_cols=259 Identities=29% Similarity=0.431 Sum_probs=214.8
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEE--------
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQ-------- 115 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-------- 115 (489)
...|+-...||+|.||+||+|+.+.+|+.||+|++--. ..++..-....+|+.+|..|+|+|++.+++.+.
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlme-neKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLME-NEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHh-ccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 35678888999999999999999999999999865321 123444455667999999999999998876553
Q ss_pred cCCEEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 116 DTFSLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 116 ~~~~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
+...+|+||.+|+. +|..++... -+|+..+++.++.+++.||.|+|++.|+|||+||+|+||+.+|.+||+|||+|+.
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 34558999999987 999988765 5799999999999999999999999999999999999999999999999999987
Q ss_pred cCCccccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc---
Q 011287 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR--- 270 (489)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~--- 270 (489)
+..... ....+....+-|.+|++||.+.+ ..|+++.|||+.|||+.+|++|.+-|.+.++..++..|...
T Consensus 174 fs~~~n------~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs 247 (376)
T KOG0669|consen 174 FSTSKN------VVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGS 247 (376)
T ss_pred eecccc------cCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhcc
Confidence 754432 12344567788999999999866 55999999999999999999999999999998877766431
Q ss_pred ----------------CC---CCCCC-------------CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 271 ----------------DI---RFPNY-------------FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 271 ----------------~~---~~p~~-------------~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
.. ++|.. -++++.||+++||..||.+|+++ .++++|.||.
T Consensus 248 ~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~a-----d~alnh~~F~ 319 (376)
T KOG0669|consen 248 ITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDA-----DQALNHDFFW 319 (376)
T ss_pred CCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcch-----Hhhhchhhhh
Confidence 01 12211 25689999999999999999999 7899999995
No 365
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.9e-38 Score=307.87 Aligned_cols=230 Identities=20% Similarity=0.271 Sum_probs=191.3
Q ss_pred eEEeeeCceEEEEEEEcCCC----------cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEE
Q 011287 51 KIYGVGSYSKVVRAKKIDTG----------TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg----------~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~l 120 (489)
+.||+|+||.||+|.+..++ ..+++|++.... .....+.+|..+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 46899999999999998777 357788765432 114667789999999999999999999888 778
Q ss_pred EEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC-------CEEEeeccCc
Q 011287 121 YMALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG-------HIKIADFGSV 192 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g-------~ikL~DFG~a 192 (489)
|+||||+.+|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++ .++|+|||++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 99999999999999998765 799999999999999999999999999999999999999888 8999999998
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcCC--CCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHh
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS--PATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIA 269 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~--~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~ 269 (489)
..... .....++..|+|||++.+. .++.++|+|||||++|+|++ |..||...+.........
T Consensus 156 ~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~- 220 (259)
T cd05037 156 ITVLS--------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ- 220 (259)
T ss_pred ccccc--------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-
Confidence 75432 1234567789999999876 78999999999999999999 688887765433332222
Q ss_pred cCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 270 RDIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 270 ~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.....|......+.++|.+||..+|.+||++
T Consensus 221 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 251 (259)
T cd05037 221 DQHRLPMPDCAELANLINQCWTYDPTKRPSF 251 (259)
T ss_pred cCCCCCCCCchHHHHHHHHHhccChhhCCCH
Confidence 2333344445899999999999999999998
No 366
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.2e-38 Score=310.46 Aligned_cols=249 Identities=21% Similarity=0.353 Sum_probs=203.7
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEc----CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc--
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKI----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD-- 116 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~----~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-- 116 (489)
...+|++.+.||+|+||.||+|+.. .++..||+|++...... .....+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~ 79 (284)
T cd05038 2 EKRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPG 79 (284)
T ss_pred chhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCC
Confidence 3468999999999999999999964 35889999999765332 345678889999999999999999999887
Q ss_pred CCEEEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCcccc
Q 011287 117 TFSLYMALESCEGGELFDQITSKG-HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPM 195 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~~-~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~ 195 (489)
....|+||||+++++|.+++.... .+++..+..++.||+.||+|||++|++||||||+||+++.++.++|+|||.+...
T Consensus 80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 567999999999999999998754 5999999999999999999999999999999999999999999999999999876
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHH-------------
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWL------------- 262 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~------------- 262 (489)
....... .......++..|+|||.+.+..++.++|+|||||++|+|++|..||.......
T Consensus 160 ~~~~~~~-------~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd05038 160 PEDKDYY-------YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIV 232 (284)
T ss_pred ccCCcce-------eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccH
Confidence 4321110 01112234567999999988889999999999999999999999987643221
Q ss_pred -HHHHHHhcC--CCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 263 -IFQRIIARD--IRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 263 -~~~~i~~~~--~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
....++... ...|..++.++.+|+.+||+.+|++||++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~ 273 (284)
T cd05038 233 TRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSF 273 (284)
T ss_pred HHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCH
Confidence 112222222 23355678999999999999999999998
No 367
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=8.1e-38 Score=305.82 Aligned_cols=244 Identities=29% Similarity=0.523 Sum_probs=205.8
Q ss_pred CeEEeeEEeeeCceEEEEEEEcC-CCcEEEEEEeecccc-------cchhHHHHHHHHHHHHHh-CCCCCccEEEEEEEc
Q 011287 46 DFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFI-------TKENKTAYVKLERIVLDQ-LDHPGVVRLFFTFQD 116 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~-tg~~vAiK~~~k~~~-------~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~~~ 116 (489)
+|++.+.||+|+||.||+|++.. +++.+|+|.+..... ........+..|..++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 58899999999999999999987 789999998864321 223334455668887764 799999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccC
Q 011287 117 TFSLYMALESCEGGELFDQITS----KGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGS 191 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~----~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~ 191 (489)
....|+||||+++++|.+++.. ...+++..+..++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999988743 3469999999999999999999996 7899999999999999999999999999
Q ss_pred ccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcC
Q 011287 192 VKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARD 271 (489)
Q Consensus 192 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~ 271 (489)
+....... ......|+..|+|||.+.+..++.++|+|||||++|+|++|.+||...+.......+....
T Consensus 161 ~~~~~~~~-----------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~ 229 (269)
T cd08528 161 AKQKQPES-----------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAV 229 (269)
T ss_pred eeeccccc-----------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhcc
Confidence 87643321 2234578999999999998889999999999999999999999998887776666665544
Q ss_pred CC-CC-CCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 272 IR-FP-NYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 272 ~~-~p-~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.. .+ ..+++.+.++|.+||+.||++||++
T Consensus 230 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~ 260 (269)
T cd08528 230 YEPLPEGMYSEDVTDVITSCLTPDAEARPDI 260 (269)
T ss_pred CCcCCcccCCHHHHHHHHHHCCCCCccCCCH
Confidence 33 22 2578999999999999999999998
No 368
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=319.49 Aligned_cols=265 Identities=31% Similarity=0.471 Sum_probs=221.2
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccc----hhHHHHHHHHHHHHHhCCCCCccEEEEEEE-cC
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK----ENKTAYVKLERIVLDQLDHPGVVRLFFTFQ-DT 117 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~ 117 (489)
..++|-++.+||+|+|+.||+|.+....+.||+|+-......+ ++......+|..+.+.|+||.||++|++|. |.
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt 540 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT 540 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence 3578999999999999999999999999999999865433332 344556678999999999999999999996 67
Q ss_pred CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC--cEeeccCCCCeeeCC---CCCEEEeeccCc
Q 011287 118 FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMG--LIHRDIKPENLLLTA---DGHIKIADFGSV 192 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~g--IiHrDLKpeNILl~~---~g~ikL~DFG~a 192 (489)
+..+-|+|||+|.+|.-|++.+..++|.+++.|+.||+.||.||.... |||-||||.|||+-. -|.+||+|||++
T Consensus 541 dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLS 620 (775)
T KOG1151|consen 541 DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLS 620 (775)
T ss_pred ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence 788999999999999999999999999999999999999999999874 999999999999954 378999999999
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcC----CCCCCCCcchhhhHHHHHHhhCCCCCCCCCH-HHHH--H
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS----SPATFGNDLWALGCTLYQMLSGTSPFKDTSE-WLIF--Q 265 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~----~~~~~~sDiwSLG~ilyelltG~~PF~~~~~-~~~~--~ 265 (489)
++++....... ......+.+.||-+|++||.+.- ...+.++||||+|||+|+.+.|+-||..... ..++ .
T Consensus 621 KIMdddSy~~v---dGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN 697 (775)
T KOG1151|consen 621 KIMDDDSYNSV---DGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN 697 (775)
T ss_pred hhccCCccCcc---cceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh
Confidence 99987653322 12345667899999999998742 2368899999999999999999999975422 2222 2
Q ss_pred HHHh-cCCCCCC--CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 266 RIIA-RDIRFPN--YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 266 ~i~~-~~~~~p~--~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
.|++ .+..||. .++.++++||++||+..-+.|... .+|-+||||.
T Consensus 698 TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV-----~qLA~dpyll 745 (775)
T KOG1151|consen 698 TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDV-----QQLACDPYLL 745 (775)
T ss_pred chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhH-----HHHccCcccc
Confidence 3433 4566774 689999999999999999999876 8899999996
No 369
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2e-37 Score=303.60 Aligned_cols=239 Identities=17% Similarity=0.287 Sum_probs=191.0
Q ss_pred eEEeeeCceEEEEEEEcCC--CcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccC
Q 011287 51 KIYGVGSYSKVVRAKKIDT--GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCE 128 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~t--g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~ 128 (489)
+.||+|+||.||+|..... ...+++|.+.... .......+.+|..+++.++||||+++++.+.+....|+||||++
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence 3689999999999976432 3456677665432 22345667889999999999999999999999999999999999
Q ss_pred CCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 129 GGELFDQITSK----GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 129 gg~L~~~l~~~----~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
+|+|.+++.+. ..+++..++.++.||+.||.|||+.|++||||||+|||++.+++++|+|||++........
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 99999999764 3467788899999999999999999999999999999999999999999999764221110
Q ss_pred CCCCCCCccceecCCcCCChhhhcC-------CCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhcC-----
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNS-------SPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIARD----- 271 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~-------~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~~----- 271 (489)
.......+|+..|+|||++.. ..++.++|||||||++|+|++ |..||...++.+.+..+....
T Consensus 155 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 230 (268)
T cd05086 155 ----IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLF 230 (268)
T ss_pred ----hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccC
Confidence 111224578899999999853 235778999999999999996 688998888777666654432
Q ss_pred -CCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 272 -IRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 272 -~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
..++..+++.+.++++.|+ .+|.+||++
T Consensus 231 ~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~ 259 (268)
T cd05086 231 KPQLELPYSERWYEVLQFCW-LSPEKRATA 259 (268)
T ss_pred CCccCCCCcHHHHHHHHHHh-hCcccCCCH
Confidence 2344567899999999999 689999999
No 370
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=5.9e-39 Score=292.15 Aligned_cols=250 Identities=26% Similarity=0.489 Sum_probs=209.5
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcC--CE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDT--FS 119 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~--~~ 119 (489)
..++|++.+.+|+|.|++||.|.+..+++.++||+++ .-+...+.+|+.+|+.|. ||||++|+++..|. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK------PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK------PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeec------hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 4678999999999999999999999999999999984 345567899999999995 99999999999875 44
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC-CCEEEeeccCccccCCc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDS 198 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~-g~ikL~DFG~a~~~~~~ 198 (489)
..+|+||+++.+...+.. .|+.-.+++|+.|++.||.|||+.||+|||+||.|++||.. ..++|+|+|+|..+.+.
T Consensus 110 paLiFE~v~n~Dfk~ly~---tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYP---TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred chhHhhhhccccHHHHhh---hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence 689999999977655543 58999999999999999999999999999999999999965 57999999999987654
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCC-CCCCHHHHHHHHHhc------
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPF-KDTSEWLIFQRIIAR------ 270 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF-~~~~~~~~~~~i~~~------ 270 (489)
. ..+-.+.+..|-.||+|-+ ..|+..-|+|||||++..|+..+-|| .|.+.++++-+|.+.
T Consensus 187 ~-----------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el 255 (338)
T KOG0668|consen 187 K-----------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDEL 255 (338)
T ss_pred c-----------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHH
Confidence 3 3345678889999999865 45889999999999999999987776 666666666555330
Q ss_pred -------CCCCC------------------------CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCC
Q 011287 271 -------DIRFP------------------------NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGI 317 (489)
Q Consensus 271 -------~~~~p------------------------~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i 317 (489)
...++ ...++++.||+.++|..|-.+|||| .|.+.||||..+
T Consensus 256 ~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTa-----kEam~HpyF~~~ 328 (338)
T KOG0668|consen 256 YAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTA-----KEAMAHPYFAPV 328 (338)
T ss_pred HHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccch-----HHHhcCchHHHH
Confidence 01111 1247999999999999999999999 889999999754
No 371
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=1.5e-37 Score=333.99 Aligned_cols=259 Identities=21% Similarity=0.292 Sum_probs=185.3
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCC----CcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEE--
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDT----GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT-- 113 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~t----g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~-- 113 (489)
..+..++|++.+.||+|+||.||+|++..+ +..||+|.+..... .+....+ .++...+.++..+...
T Consensus 127 ~~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~~~~~~~~~~~~~~ 199 (566)
T PLN03225 127 PSFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE--RVRRACPNSCADFVYGFL 199 (566)
T ss_pred CCCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH--HHHhhchhhHHHHHHhhh
Confidence 456789999999999999999999999988 99999998754311 1111111 1122222222222211
Q ss_pred ----EEcCCEEEEEEeccCCCChHHHHHhCCC--------------------CCHHHHHHHHHHHHHHHHHHHhCCcEee
Q 011287 114 ----FQDTFSLYMALESCEGGELFDQITSKGH--------------------LSEDEARFYTAEVVDALEYIHSMGLIHR 169 (489)
Q Consensus 114 ----~~~~~~lylV~E~~~gg~L~~~l~~~~~--------------------l~e~~~~~i~~qil~aL~~LH~~gIiHr 169 (489)
......+++||||+.+++|.+++..... ..+..+..++.||+.||.|||++||+||
T Consensus 200 ~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHR 279 (566)
T PLN03225 200 EPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHR 279 (566)
T ss_pred cccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 2455679999999999999998875421 1234567899999999999999999999
Q ss_pred ccCCCCeeeCC-CCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCC-----------------
Q 011287 170 DIKPENLLLTA-DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP----------------- 231 (489)
Q Consensus 170 DLKpeNILl~~-~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~----------------- 231 (489)
||||+|||++. ++.+||+|||+|+.+.... ......++||+.|+|||.+....
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~---------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~ 350 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGI---------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPV 350 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCcccccccc---------ccCCcccccCCCccChHHhhccCCCCCCccccccccccch
Confidence 99999999986 5899999999998653321 12234678999999999764322
Q ss_pred -----CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh-cCC---------------------CCCCCCCHHHHH
Q 011287 232 -----ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA-RDI---------------------RFPNYFSDAARD 284 (489)
Q Consensus 232 -----~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~-~~~---------------------~~p~~~~~~~~~ 284 (489)
++.++||||||||+|+|+++..|+. +....+.+++. ... ...+..+..+.+
T Consensus 351 l~~~~~~~k~DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~d 428 (566)
T PLN03225 351 LWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWE 428 (566)
T ss_pred hccccCCCCcccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHH
Confidence 3345699999999999999766543 33333322221 111 111122345669
Q ss_pred HHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCccc
Q 011287 285 LIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKN 321 (489)
Q Consensus 285 Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~ 321 (489)
||.+||+.||++|||+ .++++||||.+.++..
T Consensus 429 Li~~mL~~dP~kR~ta-----~e~L~Hpff~~~~~~~ 460 (566)
T PLN03225 429 LLKSMMRFKGRQRISA-----KAALAHPYFDREGLLG 460 (566)
T ss_pred HHHHHccCCcccCCCH-----HHHhCCcCcCCCCccc
Confidence 9999999999999999 8999999999887754
No 372
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=323.17 Aligned_cols=245 Identities=22% Similarity=0.367 Sum_probs=206.7
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
..+++.++..||+|+||+||+|++- -.||||+++......+ ..+.+++|+.++++-+|.||+=+.+++..... .+
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AI 464 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AI 464 (678)
T ss_pred CHHHhhccceeccccccceeecccc---cceEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhcCCce-ee
Confidence 3456789999999999999999983 4799999988876666 77889999999999999999999999988766 99
Q ss_pred EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccc
Q 011287 123 ALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~ 201 (489)
|+-+|+|-+|+.++.-. .+|....++.|+.||+.|+.|||.++|||||||..|||+.+++.|||+|||++..-..-
T Consensus 465 iTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w--- 541 (678)
T KOG0193|consen 465 ITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW--- 541 (678)
T ss_pred eehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeee---
Confidence 99999999999988643 56999999999999999999999999999999999999999999999999998753221
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhc---CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCC-----
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLN---SSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIR----- 273 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~---~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~----- 273 (489)
..........|...|||||+++ ..+|+..+|||||||++|||+||.+||...+...++-.+-.+...
T Consensus 542 -----~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~ 616 (678)
T KOG0193|consen 542 -----SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSK 616 (678)
T ss_pred -----ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchh
Confidence 1122233446788999999985 456899999999999999999999999977766655444444221
Q ss_pred CCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 274 FPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 274 ~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.-...+.++++|+..|+..++++||..
T Consensus 617 ~~s~~pk~mk~Ll~~C~~~~~~eRP~F 643 (678)
T KOG0193|consen 617 IRSNCPKAMKRLLSDCWKFDREERPLF 643 (678)
T ss_pred hhccCHHHHHHHHHHHHhcCcccCccH
Confidence 123467899999999999999999987
No 373
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=7.6e-39 Score=319.85 Aligned_cols=252 Identities=27% Similarity=0.479 Sum_probs=213.4
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC------CCCccEEEEEEEc
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD------HPGVVRLFFTFQD 116 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~------hpnIv~l~~~~~~ 116 (489)
.-.+|.+....|+|-||+|..|.+..-|..||||++....+.. ..=..|+.+|++|+ --++++|+..|..
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~----KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMH----KTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHh----hhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 3457999999999999999999999999999999998754332 23345899999994 3578999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC-CCEEEeeccCc
Q 011287 117 TFSLYMALESCEGGELFDQITSKGH---LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSV 192 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~~~---l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~-g~ikL~DFG~a 192 (489)
.+++|+|+|-+. .+|.+++++.|. |....++.|+.|+..||..|-.+||+|.||||.||||++. ..+||||||.|
T Consensus 506 knHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 506 KNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred cceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccc
Confidence 999999999985 499999998764 8999999999999999999999999999999999999976 46899999999
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCC
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDI 272 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~ 272 (489)
.....+.+ ..+.-+..|.|||++.+.+|+...|+||+||+||||+||+..|.|.+...++.-.+...-
T Consensus 585 ~~~~enei------------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KG 652 (752)
T KOG0670|consen 585 SFASENEI------------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKG 652 (752)
T ss_pred cccccccc------------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcC
Confidence 86654332 234556789999999999999999999999999999999999999988887765554333
Q ss_pred CCCCC-----------------------------------------------------C-------CHHHHHHHHHhhcc
Q 011287 273 RFPNY-----------------------------------------------------F-------SDAARDLIDRLLDV 292 (489)
Q Consensus 273 ~~p~~-----------------------------------------------------~-------~~~~~~Li~~~L~~ 292 (489)
.||.. + -..+++|+.+||.+
T Consensus 653 k~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~L 732 (752)
T KOG0670|consen 653 KFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLIL 732 (752)
T ss_pred CCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhcc
Confidence 33311 1 23589999999999
Q ss_pred CCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 293 DPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 293 dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
||++|++. .++|.||||.+
T Consensus 733 dP~KRit~-----nqAL~HpFi~~ 751 (752)
T KOG0670|consen 733 DPEKRITV-----NQALKHPFITE 751 (752)
T ss_pred ChhhcCCH-----HHHhcCCcccC
Confidence 99999998 88999999974
No 374
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=327.33 Aligned_cols=242 Identities=30% Similarity=0.497 Sum_probs=197.5
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC------
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF------ 118 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~------ 118 (489)
.-+..-+.||+|+||.||++++++||+.||||.+.+.... ...+...+|+++|++|+|||||+++++-++..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~--r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSL--RPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhccc--chHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence 4567788999999999999999999999999999876422 23455667999999999999999998776543
Q ss_pred EEEEEEeccCCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC--CC--CEEEeeccC
Q 011287 119 SLYMALESCEGGELFDQITSK---GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA--DG--HIKIADFGS 191 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~---~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~--~g--~ikL~DFG~ 191 (489)
.-.+|||||.||||+..+++- ..|++.+...++..++.||.|||++||+||||||.||++-. +| ..||+|||+
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 357999999999999999763 45999999999999999999999999999999999999843 34 479999999
Q ss_pred ccccCCccccccCCCCCCCCccceecCCcCCChhhhcC-CCCCCCCcchhhhHHHHHHhhCCCCCCCC----CHHHHHHH
Q 011287 192 VKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS-SPATFGNDLWALGCTLYQMLSGTSPFKDT----SEWLIFQR 266 (489)
Q Consensus 192 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-~~~~~~sDiwSLG~ilyelltG~~PF~~~----~~~~~~~~ 266 (489)
|+.+.+. ....+++||..|++||++.. +.|+..+|+|||||++|++.||..||... +.+++...
T Consensus 171 Arel~d~-----------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~ 239 (732)
T KOG4250|consen 171 ARELDDN-----------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWH 239 (732)
T ss_pred cccCCCC-----------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhh
Confidence 9987543 35568999999999999985 88999999999999999999999999542 22334333
Q ss_pred HHh---------------------cCCCCCCCCCHHH----HHHHHHhhccCCCCCCC
Q 011287 267 IIA---------------------RDIRFPNYFSDAA----RDLIDRLLDVDPSGRPG 299 (489)
Q Consensus 267 i~~---------------------~~~~~p~~~~~~~----~~Li~~~L~~dP~~R~t 299 (489)
+.. ..+++|..+++.+ -..+..+|..+|++|.+
T Consensus 240 ~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~ 297 (732)
T KOG4250|consen 240 IITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGH 297 (732)
T ss_pred hhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCC
Confidence 332 1234455555554 45677788899999984
No 375
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-37 Score=312.72 Aligned_cols=244 Identities=26% Similarity=0.374 Sum_probs=195.4
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC-EEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF-SLYMA 123 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-~lylV 123 (489)
++|.-...||+|+||.||+|.... |..||||.+....... ...+.+|+.++.+++|||+|+|++++.+.. ..++|
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence 678888999999999999999855 4999999876543221 334888999999999999999999999988 59999
Q ss_pred EeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCC---cEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 124 LESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMG---LIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~g---IiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
+||+++|+|.+++.... .+++.....||.+++.||+|||... ||||||||+|||+|++...||+|||+|+.....
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~ 230 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG 230 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence 99999999999998764 8999999999999999999999854 999999999999999999999999999654320
Q ss_pred cccccCCCCCCCCccce-ecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC---H---HHHHHHHH-hc
Q 011287 199 RITVLPNAASDDKACTF-VGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS---E---WLIFQRII-AR 270 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~-~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~---~---~~~~~~i~-~~ 270 (489)
.....+. .||..|++||.+..+..+.++||||||+++.||++|+.|..... + .+...... ..
T Consensus 231 ----------~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~ 300 (361)
T KOG1187|consen 231 ----------DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG 300 (361)
T ss_pred ----------ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc
Confidence 1111122 79999999999999999999999999999999999998886432 1 11111111 11
Q ss_pred ------CCCCC-CCCC--HH---HHHHHHHhhccCCCCCCCCCC
Q 011287 271 ------DIRFP-NYFS--DA---ARDLIDRLLDVDPSGRPGAGP 302 (489)
Q Consensus 271 ------~~~~p-~~~~--~~---~~~Li~~~L~~dP~~R~t~~~ 302 (489)
+..+. ...+ .. +..+..+|++.+|.+||++.+
T Consensus 301 ~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~ 344 (361)
T KOG1187|consen 301 KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQ 344 (361)
T ss_pred chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHH
Confidence 12222 2233 22 557788999999999999843
No 376
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-37 Score=323.43 Aligned_cols=254 Identities=30% Similarity=0.538 Sum_probs=223.3
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEE-----cC
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQ-----DT 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~-----~~ 117 (489)
-+-|+|..+||.|.||.||+++++.+++..|+|++.-. +...+.++.|.++|+.+ +|||++..|++|. ..
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~----~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT----EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC----ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 46799999999999999999999999999999998654 33445677788999887 6999999999885 35
Q ss_pred CEEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCcccc
Q 011287 118 FSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPM 195 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~ 195 (489)
+.+|||||||.||+.-+++++. .++.|..+..|+.+++.||.|||.+.++|||||-.|||++.+|.|||+|||.+..+
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 6899999999999999998764 57999999999999999999999999999999999999999999999999998765
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcC-----CCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNS-----SPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~-----~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~ 270 (489)
.. ...+.++++||+.|||||++.- ..|+..+|+||||++..||..|.+|+-...+...+-.|...
T Consensus 174 ds----------T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRN 243 (953)
T KOG0587|consen 174 DS----------TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN 243 (953)
T ss_pred ec----------ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCC
Confidence 43 2467789999999999999853 34788899999999999999999999999888777676654
Q ss_pred CC---CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 271 DI---RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 271 ~~---~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.+ .-|..++.++.++|..||.+|-.+||+. .+++.|||...
T Consensus 244 PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~-----~~ll~hpFi~e 287 (953)
T KOG0587|consen 244 PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPST-----EELLKHPFITE 287 (953)
T ss_pred CCccccchhhHHHHHHHHHHHHHhhccccCcch-----hhhccCCcccc
Confidence 33 2367799999999999999999999998 78999999973
No 377
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.4e-37 Score=327.36 Aligned_cols=252 Identities=23% Similarity=0.389 Sum_probs=218.9
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEc-----CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEE
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKI-----DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTF 114 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~-----~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~ 114 (489)
..+...+-++.+.||+|+||+||+|+-. .....||||.++.. ...+....+++|+.++..++|||||+|++++
T Consensus 481 ~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l~H~nIVrLlGVC 558 (774)
T KOG1026|consen 481 LEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--AENQARQDFRREAELLAELQHPNIVRLLGVC 558 (774)
T ss_pred eEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence 3456678899999999999999999863 23578999999754 2344678899999999999999999999999
Q ss_pred EcCCEEEEEEeccCCCChHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC
Q 011287 115 QDTFSLYMALESCEGGELFDQITSKG--------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA 180 (489)
Q Consensus 115 ~~~~~lylV~E~~~gg~L~~~l~~~~--------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~ 180 (489)
...+.+|+|+|||..|||.++|...+ +++..+...+|.||+.|++||-++.+|||||-..|.||.+
T Consensus 559 ~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 559 REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGE 638 (774)
T ss_pred ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceecc
Confidence 99999999999999999999997542 2788899999999999999999999999999999999999
Q ss_pred CCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCC
Q 011287 181 DGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTS 259 (489)
Q Consensus 181 ~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~ 259 (489)
+..|||+|||+++..-..+++. .. ..-.-...|||||.+..+.++.+|||||+||+|+|+++ |+.||.+.+
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk-------~~-~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS 710 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYK-------VR-GNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS 710 (774)
T ss_pred ceEEEecccccchhhhhhhhhc-------cc-CCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc
Confidence 9999999999998643322211 01 01123467999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHhcC-CCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 260 EWLIFQRIIARD-IRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 260 ~~~~~~~i~~~~-~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
..+.++.|.++. ++.|+..|.++.+|+..|++.+|.+||+..
T Consensus 711 n~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~ 753 (774)
T KOG1026|consen 711 NQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFK 753 (774)
T ss_pred hHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHH
Confidence 999999998876 467899999999999999999999999983
No 378
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=295.08 Aligned_cols=253 Identities=26% Similarity=0.447 Sum_probs=215.4
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcC------
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDT------ 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 117 (489)
..+|.-++.+|.|.- .|..|-+.-+++.||+|.+...+.. ........+|..++..++|+||++++.+|.-.
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n-~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN-QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc-CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 468999999999999 8999999999999999998776433 33345567899999999999999999999643
Q ss_pred CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 118 FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
..+|+|||++.. +|...+.. .++-..+.++++|++.|+.|||+.||+||||||+||++..++.+||.|||+|+.-..
T Consensus 94 ~e~y~v~e~m~~-nl~~vi~~--elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 94 QEVYLVMELMDA-NLCQVILM--ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred HhHHHHHHhhhh-HHHHHHHH--hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCc
Confidence 458999999975 99888884 489999999999999999999999999999999999999999999999999985322
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc-------
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR------- 270 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~------- 270 (489)
.-....++.|..|+|||++.+..+...+||||+|||+.||++|...|.|.+...++.++...
T Consensus 171 -----------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 171 -----------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred -----------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHH
Confidence 12455789999999999999999999999999999999999999999998887777666541
Q ss_pred --------------------CCC----CCCC-----------CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 271 --------------------DIR----FPNY-----------FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 271 --------------------~~~----~p~~-----------~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
... ||+. -+..++||+.+||..||++|.++ ++++.||||+
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv-----~daL~HPY~~ 314 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISV-----DDALRHPYIK 314 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccH-----HHHhcCCeee
Confidence 011 2221 24568999999999999999998 8899999998
Q ss_pred CCCc
Q 011287 316 GIDW 319 (489)
Q Consensus 316 ~i~~ 319 (489)
-|
T Consensus 315 --vw 316 (369)
T KOG0665|consen 315 --VW 316 (369)
T ss_pred --ee
Confidence 46
No 379
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=6.3e-36 Score=285.22 Aligned_cols=240 Identities=43% Similarity=0.755 Sum_probs=209.1
Q ss_pred CceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCCChHHHH
Q 011287 57 SYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQI 136 (489)
Q Consensus 57 ~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L~~~l 136 (489)
+||.||+|.+..+|+.+|+|++........ ...+.+|+..+++++|+||+++++.+......++++||+.+++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 689999999999999999999976533221 567888999999999999999999999989999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCcccee
Q 011287 137 TSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFV 216 (489)
Q Consensus 137 ~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~ 216 (489)
.....++...+..++.+++.+|.+||+.|++|+||+|.||+++.++.++|+|||.+....... ......
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-----------~~~~~~ 147 (244)
T smart00220 79 KKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-----------LLTTFV 147 (244)
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-----------cccccc
Confidence 887669999999999999999999999999999999999999999999999999988654321 223456
Q ss_pred cCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCC-CCHHHHHHHHHhcCCCCCCC---CCHHHHHHHHHhhcc
Q 011287 217 GTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD-TSEWLIFQRIIARDIRFPNY---FSDAARDLIDRLLDV 292 (489)
Q Consensus 217 gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~-~~~~~~~~~i~~~~~~~p~~---~~~~~~~Li~~~L~~ 292 (489)
++..|+|||.+.+..++.++|+||||+++|+|++|..||.. .+.....+.+.......+.. ++.++.+++.+||..
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 227 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVK 227 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccC
Confidence 88899999999988889999999999999999999999988 55555555555555444433 889999999999999
Q ss_pred CCCCCCCCCCCCHHHHhcCCCC
Q 011287 293 DPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 293 dP~~R~t~~~~~~~~l~~hpff 314 (489)
||++||++ .++++||||
T Consensus 228 ~p~~Rp~~-----~~~~~~~~~ 244 (244)
T smart00220 228 DPEKRLTA-----EEALQHPFF 244 (244)
T ss_pred CchhccCH-----HHHhhCCCC
Confidence 99999998 899999997
No 380
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=330.07 Aligned_cols=254 Identities=23% Similarity=0.421 Sum_probs=218.6
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCc-----EEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGT-----VYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD 116 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~-----~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~ 116 (489)
+....-.+++.||+|.||.||.|....... .||||.+.+. ..++....+.+|..+|+.++|||||+++++.-+
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 456788999999999999999999865332 3888887653 456777888899999999999999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeec
Q 011287 117 TFSLYMALESCEGGELFDQITSK-------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADF 189 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~-------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DF 189 (489)
....++++|||+||||..+|++. ..++..+...++.+|+.|+.||+++++|||||...|+||+....+||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 99999999999999999999876 24899999999999999999999999999999999999999999999999
Q ss_pred cCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHH-H
Q 011287 190 GSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQR-I 267 (489)
Q Consensus 190 G~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~-i 267 (489)
|+|+.+-...++.... .-.-...|||||.+.+..++.++|||||||++||+++ |..||.+.+..+++.- .
T Consensus 847 GlArDiy~~~yyr~~~--------~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~ 918 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHG--------EAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVL 918 (1025)
T ss_pred chhHhhhhchheeccC--------ccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHH
Confidence 9999543333221111 0112347999999999999999999999999999999 9999999999888774 4
Q ss_pred HhcCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhc
Q 011287 268 IARDIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKM 310 (489)
Q Consensus 268 ~~~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~ 310 (489)
..+.+..|..+|..+.+|+..|+..+|++||+. ..|++
T Consensus 919 ~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F-----~~i~~ 956 (1025)
T KOG1095|consen 919 EGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSF-----RTIVE 956 (1025)
T ss_pred hCCccCCCCCCChHHHHHHHHHccCChhhCccH-----HHHHh
Confidence 456788899999999999999999999999987 55654
No 381
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3e-35 Score=309.60 Aligned_cols=263 Identities=22% Similarity=0.280 Sum_probs=191.5
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEc----------------CCCcEEEEEEeecccccc-----------hhHHHHH
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKI----------------DTGTVYALKIMDKKFITK-----------ENKTAYV 92 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~----------------~tg~~vAiK~~~k~~~~~-----------~~~~~~~ 92 (489)
.+++.++|++.++||+|+||.||+|... ..++.||||.+....... ....+..
T Consensus 140 ~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~ 219 (507)
T PLN03224 140 SRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG 219 (507)
T ss_pred CCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence 4578899999999999999999999752 345689999985431110 0011223
Q ss_pred HHHHHHHHhCCCCCc-----cEEEEEEEc--------CCEEEEEEeccCCCChHHHHHhC--------------------
Q 011287 93 KLERIVLDQLDHPGV-----VRLFFTFQD--------TFSLYMALESCEGGELFDQITSK-------------------- 139 (489)
Q Consensus 93 ~~E~~il~~l~hpnI-----v~l~~~~~~--------~~~lylV~E~~~gg~L~~~l~~~-------------------- 139 (489)
..|..++.+++|.++ ++++++|.. ....|+||||+++++|.+++...
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~ 299 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD 299 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence 346667777766554 556565542 35689999999999999988642
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCccce
Q 011287 140 ----GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTF 215 (489)
Q Consensus 140 ----~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~ 215 (489)
..+++..++.++.|++.||.|||+.+|+||||||+|||++.++.+||+|||++..+.... .......
T Consensus 300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~---------~~~~~~g 370 (507)
T PLN03224 300 NMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI---------NFNPLYG 370 (507)
T ss_pred hcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC---------ccCcccc
Confidence 123567888999999999999999999999999999999999999999999987543211 0111122
Q ss_pred ecCCcCCChhhhcCCC--------------------C--CCCCcchhhhHHHHHHhhCCC-CCCCCCH-----------H
Q 011287 216 VGTAAYVPPEVLNSSP--------------------A--TFGNDLWALGCTLYQMLSGTS-PFKDTSE-----------W 261 (489)
Q Consensus 216 ~gt~~Y~aPE~l~~~~--------------------~--~~~sDiwSLG~ilyelltG~~-PF~~~~~-----------~ 261 (489)
.+|+.|+|||++.... + ....|+||+|||+|+|++|.+ ||.+... .
T Consensus 371 ~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~ 450 (507)
T PLN03224 371 MLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDL 450 (507)
T ss_pred CCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchH
Confidence 3578999999985432 1 124699999999999999986 7754211 1
Q ss_pred HHHHHHHhcCCCCC--CCCCHHHHHHHHHhhccCC---CCCCCCCCCCHHHHhcCCCCCC
Q 011287 262 LIFQRIIARDIRFP--NYFSDAARDLIDRLLDVDP---SGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 262 ~~~~~i~~~~~~~p--~~~~~~~~~Li~~~L~~dP---~~R~t~~~~~~~~l~~hpff~~ 316 (489)
..+..+....+.++ +..++.++||+.+||..+| .+|+|+ +++++||||..
T Consensus 451 ~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa-----~eaL~Hp~f~~ 505 (507)
T PLN03224 451 NRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSV-----GQALSHRFFLP 505 (507)
T ss_pred HHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCH-----HHHhCCCCcCC
Confidence 12222333344444 5678999999999999866 689999 89999999963
No 382
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=100.00 E-value=2.7e-36 Score=247.84 Aligned_cols=100 Identities=49% Similarity=0.814 Sum_probs=88.8
Q ss_pred cccccccCCCceEEEEEeeehhhhhhccceeEEEecCCeEEEECCCCCeeeeeeeccCCCCceEEEEcCCCcEEEEcCCc
Q 011287 386 SKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQVSSPSHFKIVTPKK 465 (489)
Q Consensus 386 ~~~~~~~~~~~~i~~~g~~~k~~g~~~k~r~~~lt~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~~~~~~~f~i~~p~r 465 (489)
|+||+|+++||+|+++|.|.|++|+|+|+|||||||+|||+|+||.+|++||||||++. ++++.+++++|+|+||+|
T Consensus 1 ~~w~~fl~~ge~Il~~g~v~K~kgl~~kkR~liLTd~PrL~Yvdp~~~~~KGeI~~~~~---l~v~~k~~~~F~I~tp~R 77 (104)
T PF14593_consen 1 NKWHRFLNPGELILKQGYVKKRKGLFAKKRQLILTDGPRLFYVDPKKMVLKGEIPWSKE---LSVEVKSFKTFFIHTPKR 77 (104)
T ss_dssp -TTGGGTT-T--EEEEEEEEEEETTEEEEEEEEEETTTEEEEEETTTTEEEEEE--STT----EEEECSSSEEEEEETTE
T ss_pred CchHHhhcCCCeEEEEEEEEEeeceEEEEEEEEEccCCEEEEEECCCCeECcEEecCCc---eEEEEccCCEEEEECCCc
Confidence 57999999999999999999999999999999999999999999999999999999987 999999999999999999
Q ss_pred eEEEEcCCccHHHHHHHHHHhcC
Q 011287 466 VLSFEDAKQRASQWKKAIEALQN 488 (489)
Q Consensus 466 ~y~~~d~~~~~~~W~~~i~~~~~ 488 (489)
||+|+|++++|.+||++|+++++
T Consensus 78 tY~l~d~~~~A~~W~~~I~~~~~ 100 (104)
T PF14593_consen 78 TYYLEDPEGNAQQWVEAIEEVKK 100 (104)
T ss_dssp EEEEE-TTS-HHHHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999863
No 383
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=287.67 Aligned_cols=258 Identities=25% Similarity=0.432 Sum_probs=210.3
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHH-HHhCCCCCccEEEEEEEcCC
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIV-LDQLDHPGVVRLFFTFQDTF 118 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~i-l~~l~hpnIv~l~~~~~~~~ 118 (489)
-.++.++.+-+..||.|+||+|++..++.+|+..|||.+....+ +..+..+..|.++ ++.-+.||||++|+....++
T Consensus 59 ~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG 136 (361)
T KOG1006|consen 59 HTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG 136 (361)
T ss_pred cccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC
Confidence 45666777888999999999999999999999999999987655 3444556667775 45557999999999999999
Q ss_pred EEEEEEeccCCCChHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCEEEeeccCc
Q 011287 119 SLYMALESCEGGELFDQIT-----SKGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~-----~~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ikL~DFG~a 192 (489)
..|+.||.|.- +|..+.+ +...++|+.+-.+....+.||+||-. .+|||||+||+|||++..|.+||||||.+
T Consensus 137 dcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIc 215 (361)
T KOG1006|consen 137 DCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGIC 215 (361)
T ss_pred ceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccch
Confidence 99999999964 6654332 23569999999999999999999975 58999999999999999999999999998
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhc--CCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH-HHHHHHHHh
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLN--SSPATFGNDLWALGCTLYQMLSGTSPFKDTSE-WLIFQRIIA 269 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~--~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~-~~~~~~i~~ 269 (489)
..+.++-- ...-.|...|||||.+. +..|+-++|+||||++|||+.||..|+++-+. .+++..+..
T Consensus 216 GqLv~SiA-----------kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~ 284 (361)
T KOG1006|consen 216 GQLVDSIA-----------KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI 284 (361)
T ss_pred HhHHHHHH-----------hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc
Confidence 76544321 11226888999999995 34589999999999999999999999998655 334444445
Q ss_pred cCCC---CCCC---CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 270 RDIR---FPNY---FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 270 ~~~~---~p~~---~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
++++ ++.. ++..++.+|.-||.+|-+.||.. .+|+++||++-
T Consensus 285 gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky-----~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 285 GDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKY-----DDLKKFPFYRM 332 (361)
T ss_pred CCCCeecCcccccccCHHHHHHHHHHhhcccccCcch-----hhhhcCchhhh
Confidence 5433 2332 78999999999999999999976 88999999974
No 384
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=319.99 Aligned_cols=245 Identities=33% Similarity=0.540 Sum_probs=203.4
Q ss_pred eEEeeEEeeeCceE-EEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEEEEE
Q 011287 47 FELGKIYGVGSYSK-VVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 47 y~~~~~LG~G~~g~-Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~lylV~ 124 (489)
|.--+++|.|+-|+ ||+|.. .|++||||.+- ........+|+..|+.. .|||||++|+.-++...+|+..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll------~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLL------EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHh------hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44456779999985 899988 58999999873 34556788899999988 6999999999999999999999
Q ss_pred eccCCCChHHHHHhCCC----CCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC---CC--CEEEeeccCcccc
Q 011287 125 ESCEGGELFDQITSKGH----LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA---DG--HIKIADFGSVKPM 195 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~----l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~---~g--~ikL~DFG~a~~~ 195 (489)
|.|.. +|.+++...+. ......+....|++.||+|||+.+||||||||.||||+. +| .++|+|||+++.+
T Consensus 583 ELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 99976 99999987421 112456888999999999999999999999999999986 34 6899999999988
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhC-CCCCCCCCHHHHHHHHHhcCCCC
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSG-TSPFKDTSEWLIFQRIIARDIRF 274 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG-~~PF~~~~~~~~~~~i~~~~~~~ 274 (489)
..... +-.+..+..||.+|+|||+|....-+.++||+||||++|+.++| ..||...-+ .-.+|+.+.+.+
T Consensus 662 ~~~~s-------S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~~~~L 732 (903)
T KOG1027|consen 662 AGGKS-------SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTGNYTL 732 (903)
T ss_pred CCCcc-------hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcCccce
Confidence 76542 22345677899999999999998888899999999999999986 999977543 334677776654
Q ss_pred CC---CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 275 PN---YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 275 p~---~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
-. .-..++.|||.+||.+||..||+| .+++.||||
T Consensus 733 ~~L~~~~d~eA~dLI~~ml~~dP~~RPsa-----~~VL~HPlF 770 (903)
T KOG1027|consen 733 VHLEPLPDCEAKDLISRMLNPDPQLRPSA-----TDVLNHPLF 770 (903)
T ss_pred eeeccCchHHHHHHHHHhcCCCcccCCCH-----HHHhCCCcc
Confidence 32 112289999999999999999999 889999999
No 385
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-37 Score=286.24 Aligned_cols=260 Identities=27% Similarity=0.394 Sum_probs=216.9
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCC-----
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTF----- 118 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 118 (489)
..|.+-.+.||-|+||.||.+++..+|+.||+|.+..-+ ..-.....+.+|..+|...+|.|++..++..+...
T Consensus 52 q~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFq 130 (449)
T KOG0664|consen 52 QQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQ 130 (449)
T ss_pred cccCCCCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHH
Confidence 467788899999999999999999999999999886542 22334566788999999999999999988877543
Q ss_pred EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 119 SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.+|+++|.+.. +|...|.....++.+.++.+.+||+.||.|||+.||.||||||.|+|++.|..+||||||+|+..+..
T Consensus 131 EiYV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 131 ELYVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh
Confidence 37889999964 89998888788999999999999999999999999999999999999999999999999999975432
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh--------
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA-------- 269 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~-------- 269 (489)
. ......-+-|-.|+|||++.+. .|+.+.||||+|||+.||+..+..|...++.+.++.|..
T Consensus 210 ~---------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~E 280 (449)
T KOG0664|consen 210 D---------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQE 280 (449)
T ss_pred h---------hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHH
Confidence 2 1122234678899999999875 499999999999999999999999999999888877754
Q ss_pred ---------------cC---CCC--------CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCc
Q 011287 270 ---------------RD---IRF--------PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDW 319 (489)
Q Consensus 270 ---------------~~---~~~--------p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~ 319 (489)
.. +.+ |..-..++.+++.++|.+||++|.+. ++.+.|+|......
T Consensus 281 aMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~-----~~A~~~~~~~e~R~ 351 (449)
T KOG0664|consen 281 AMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISV-----EEALQHRYLEEGRL 351 (449)
T ss_pred HHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccH-----hhhcccccccccce
Confidence 11 111 22345778999999999999999987 78899999875443
No 386
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-35 Score=290.30 Aligned_cols=134 Identities=28% Similarity=0.382 Sum_probs=115.3
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-----C---CCccEEEE
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-----H---PGVVRLFF 112 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-----h---pnIv~l~~ 112 (489)
.+.-.+|.+.++||.|-|++||+|.|..+.+.||+|+.+.. +...+....|+.+|+++. | ..||+|++
T Consensus 74 ~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD 149 (590)
T KOG1290|consen 74 VFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLD 149 (590)
T ss_pred cccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeec
Confidence 45557899999999999999999999999999999998654 334455666999998872 3 46999999
Q ss_pred EEEc----CCEEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeC
Q 011287 113 TFQD----TFSLYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLT 179 (489)
Q Consensus 113 ~~~~----~~~lylV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~ 179 (489)
.|.. ..+++||+|++ |.+|+.+|.+. ..++...++.|++||+.||.|||. +||||-||||||||+.
T Consensus 150 ~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 150 HFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred cceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 9974 56899999999 66999999875 459999999999999999999996 5999999999999993
No 387
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=300.66 Aligned_cols=218 Identities=30% Similarity=0.469 Sum_probs=191.9
Q ss_pred cCCccccccCCCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccc-----hhHHHHHHHHHHHHHhC
Q 011287 28 QRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-----ENKTAYVKLERIVLDQL 102 (489)
Q Consensus 28 ~~~~s~~~~~~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~-----~~~~~~~~~E~~il~~l 102 (489)
..+.....+.+.+.....+|..++.+|+|+||.|++|.++++..+|+||.+.|+.+.. ..+...+-.|+.+|..|
T Consensus 544 a~e~e~~~~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l 623 (772)
T KOG1152|consen 544 AVEPEGNIGCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATL 623 (772)
T ss_pred ccCccccccceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHh
Confidence 3344445556666677889999999999999999999999999999999998876553 33455677899999999
Q ss_pred C---CCCccEEEEEEEcCCEEEEEEecc-CCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeee
Q 011287 103 D---HPGVVRLFFTFQDTFSLYMALESC-EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLL 178 (489)
Q Consensus 103 ~---hpnIv~l~~~~~~~~~lylV~E~~-~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl 178 (489)
+ |+||++++++|++.+++|++||-- +|.+|+++|..+..++|.+++.++.|++.|+++||+.||||||||-||+.+
T Consensus 624 ~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv 703 (772)
T KOG1152|consen 624 NKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV 703 (772)
T ss_pred hhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE
Confidence 7 999999999999999999999875 567999999999999999999999999999999999999999999999999
Q ss_pred CCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCC-CCCCcchhhhHHHHHHhhCCCCCCC
Q 011287 179 TADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPA-TFGNDLWALGCTLYQMLSGTSPFKD 257 (489)
Q Consensus 179 ~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~-~~~sDiwSLG~ilyelltG~~PF~~ 257 (489)
+.+|-+||+|||.|..... .....|+||..|.|||+|.+..| +..-||||||++||.++....||..
T Consensus 704 d~~g~~klidfgsaa~~ks------------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 704 DSNGFVKLIDFGSAAYTKS------------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred ecCCeEEEeeccchhhhcC------------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 9999999999999875432 34458999999999999999886 6778999999999999999888853
No 388
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-35 Score=299.66 Aligned_cols=269 Identities=22% Similarity=0.372 Sum_probs=221.5
Q ss_pred CeEEeeEEeeeCceEEEEEEEcC----CCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKID----TGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~----tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
+....+.||+|-||.||.|.... ..-.||||.+++.... +..+.+..|..+|+.++|||||+|++++.+. ..|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~--d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~W 466 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP--DDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMW 466 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh--hhHHHHHHHHHHHHhCCCcchhheeeeeecc-cee
Confidence 34556789999999999998643 2446899999775322 3367788899999999999999999999875 699
Q ss_pred EEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 122 MALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
+|||.++-|+|..+++.+ ..++......|++||+.||.|||+.++|||||-..|||+....-+||+|||+++.+.+...
T Consensus 467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y 546 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY 546 (974)
T ss_pred EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccch
Confidence 999999999999999876 5699999999999999999999999999999999999999999999999999998876543
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYF 278 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~ 278 (489)
... +.---..-|||||-++-..++.++|||-|||.++|++. |.-||.+....+.+-.|.++ .++.|+.+
T Consensus 547 Yka---------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nC 617 (974)
T KOG4257|consen 547 YKA---------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNC 617 (974)
T ss_pred hhc---------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCC
Confidence 321 11112346999999999999999999999999999887 99999998888777777665 47789999
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCC--CCH------------HHHhcCCCCCCCCcccccCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGP--GGY------------AVLKMHPFFKGIDWKNIRGQT 326 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~--~~~------------~~l~~hpff~~i~~~~~~~~~ 326 (489)
|+.+..|..+|+..||.+||...+ ..+ +++....+-....|++-....
T Consensus 618 Pp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek~~~~Eq~r~~R~~a~~~~~~~~~~e 679 (974)
T KOG4257|consen 618 PPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEKINSSEQLRRQRKVASMIWQNSDDIE 679 (974)
T ss_pred ChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhhhhhHHHHHhhhcccceeeccCCccC
Confidence 999999999999999999999854 122 233344455556676644443
No 389
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-34 Score=289.63 Aligned_cols=250 Identities=20% Similarity=0.300 Sum_probs=210.6
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
+.+-.+...+.+.||+|-||+|.++.- ..+..||+|.++.. ........+..|+.+|.+|+||||++|++++..++.
T Consensus 533 ~EfPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~--a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP 609 (807)
T KOG1094|consen 533 VEFPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPD--ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP 609 (807)
T ss_pred hhcchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcc--cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc
Confidence 455567789999999999999999986 34799999998654 233345678889999999999999999999999999
Q ss_pred EEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 120 LYMALESCEGGELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
+++|+||+++|+|.+++.++. .+.......++.||+.|++||.+.++|||||.+.|+|++.++++||+|||.++.+-.
T Consensus 610 icmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 610 LCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred hHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccccccc
Confidence 999999999999999999873 334556666999999999999999999999999999999999999999999985432
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHh--hCCCCCCCCCHHHHHHHHHh------
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML--SGTSPFKDTSEWLIFQRIIA------ 269 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyell--tG~~PF~~~~~~~~~~~i~~------ 269 (489)
... -.....++-...|||||.+.-+.++.++|+|++|+++||++ +...||...++.+...+...
T Consensus 690 g~y--------y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~ 761 (807)
T KOG1094|consen 690 GDY--------YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQG 761 (807)
T ss_pred CCc--------eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCC
Confidence 221 12233566778999999999999999999999999999975 58999999888777665543
Q ss_pred --cCCCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 270 --RDIRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 270 --~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.-+.-|..++..+.+|+-+|+..|-++||+.
T Consensus 762 ~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsF 794 (807)
T KOG1094|consen 762 RQVVLSRPPACPQGLYELMLRCWRRESEQRPSF 794 (807)
T ss_pred cceeccCCCcCcHHHHHHHHHHhchhhhcCCCH
Confidence 1234577799999999999999999999987
No 390
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-34 Score=294.31 Aligned_cols=247 Identities=25% Similarity=0.402 Sum_probs=213.8
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCC-C--cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDT-G--TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~t-g--~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~l 120 (489)
.++....++||+|+||.|+.|.+... | -.||||.+....... ....+.+|+.+|.+|+|||+++||++..+ ..+
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~ 185 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA 185 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence 45678889999999999999999653 3 358999987653332 56778899999999999999999999998 678
Q ss_pred EEEEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCc
Q 011287 121 YMALESCEGGELFDQITS--KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDS 198 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~--~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~ 198 (489)
.+|||.|++|+|++.|.+ .+.|.......|+.||+.|+.||.++++|||||-..|+|+-....|||+|||+.+.+...
T Consensus 186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 999999999999999987 356999999999999999999999999999999999999998889999999999987654
Q ss_pred cccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPN 276 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~ 276 (489)
...... ....--...|+|||.|+...++.++|+|++||+|+||++ |..||.+....+++++|-++ .+.-|+
T Consensus 266 ed~Yvm-------~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk 338 (1039)
T KOG0199|consen 266 EDMYVM-------APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPK 338 (1039)
T ss_pred CcceEe-------cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCC
Confidence 322110 001112347999999999999999999999999999998 89999999999999998754 356788
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
.++.++.+++..|+..+|.+||+.
T Consensus 339 ~csedIY~imk~cWah~paDRptF 362 (1039)
T KOG0199|consen 339 YCSEDIYQIMKNCWAHNPADRPTF 362 (1039)
T ss_pred CChHHHHHHHHHhccCCccccccH
Confidence 999999999999999999999997
No 391
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.5e-34 Score=326.47 Aligned_cols=230 Identities=20% Similarity=0.302 Sum_probs=182.8
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
.|....+||+|+||.||+|++..+|..||+|.+...... ...|+.++++++|||||++++++.+....|+|||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E 763 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE 763 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence 456678999999999999999999999999988643211 1235778999999999999999999999999999
Q ss_pred ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 126 SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH---SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH---~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|+++|+|.+++.. +++..+..++.||+.||+||| +.+|+||||||+||+++.++..++. ||.+....
T Consensus 764 y~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~------ 833 (968)
T PLN00113 764 YIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC------ 833 (968)
T ss_pred CCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc------
Confidence 9999999999963 899999999999999999999 6699999999999999998887775 66544221
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCH----HHHHHHH-H---------
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSE----WLIFQRI-I--------- 268 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~----~~~~~~i-~--------- 268 (489)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+.+. .
T Consensus 834 --------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 905 (968)
T PLN00113 834 --------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWI 905 (968)
T ss_pred --------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhhee
Confidence 11133688999999999999999999999999999999999999954211 1111110 0
Q ss_pred hcC----CCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 269 ARD----IRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 269 ~~~----~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
... ...+.....++.+++.+|++.||++||++
T Consensus 906 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~ 941 (968)
T PLN00113 906 DPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCA 941 (968)
T ss_pred CccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCH
Confidence 000 01111122357789999999999999998
No 392
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=100.00 E-value=8.5e-34 Score=222.31 Aligned_cols=89 Identities=63% Similarity=0.901 Sum_probs=85.1
Q ss_pred EEEEEeeehhhhhhccceeEEEecCCeEEEECCCCCeeeeeeeccCCCCceEEEEcCCCcEEEEcCCceEEEEcCCccHH
Q 011287 398 VLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQVSSPSHFKIVTPKKVLSFEDAKQRAS 477 (489)
Q Consensus 398 i~~~g~~~k~~g~~~k~r~~~lt~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~~~~~~~f~i~~p~r~y~~~d~~~~~~ 477 (489)
|+++|.|.|++|+|+|+|||||||+|||+|+||.+|++||||||+++ +++++.+|+++|+|+||+|||+|+|++++|+
T Consensus 1 Il~~g~v~Kr~glf~kkR~LiLTd~PrL~yvdp~~~~~KgeIp~s~~--~l~v~~~~~~~F~I~Tp~rty~leD~~~~a~ 78 (89)
T cd01262 1 ILKIGAVKKRKGLFAKKRQLILTNGPRLIYVDPVKKVVKGEIPWSDV--ELRVEVKNSSHFFVHTPNKVYSFEDPKGRAS 78 (89)
T ss_pred CceeeeeeehhccccceeeEEEecCceEEEEcCCcCeEEeEeccccc--ceEEEEecCccEEEECCCceEEEECCCCCHH
Confidence 68999999999999999999999999999999999999999999992 3999999999999999999999999999999
Q ss_pred HHHHHHHHhcC
Q 011287 478 QWKKAIEALQN 488 (489)
Q Consensus 478 ~W~~~i~~~~~ 488 (489)
+||++|+++.+
T Consensus 79 ~W~~~I~~~~~ 89 (89)
T cd01262 79 QWKKAIEDLQK 89 (89)
T ss_pred HHHHHHHHHhC
Confidence 99999999753
No 393
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=301.68 Aligned_cols=260 Identities=36% Similarity=0.677 Sum_probs=233.0
Q ss_pred EEeeeCceEEEEEEE---cCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCCEEEEEEecc
Q 011287 52 IYGVGSYSKVVRAKK---IDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTFSLYMALESC 127 (489)
Q Consensus 52 ~LG~G~~g~Vy~a~~---~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~lylV~E~~ 127 (489)
++|.|+||.|++++. .+.|.-||+|+..+.......+. ....|+.++..++ ||++|+++..|+.+..+|+++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999998875 35689999999988766655555 5666899999987 999999999999999999999999
Q ss_pred CCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCC
Q 011287 128 EGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAA 207 (489)
Q Consensus 128 ~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~ 207 (489)
.||+|...+.+...+++...+++.++++.|++++|+.||+|||+|++||+++.+||+++.|||+++..-...
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~-------- 151 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK-------- 151 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh--------
Confidence 999999999998899999999999999999999999999999999999999999999999999998654332
Q ss_pred CCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Q 011287 208 SDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLID 287 (489)
Q Consensus 208 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~ 287 (489)
..|||..|||||+++ +...++|+||+|++.|+|++|..||.+ ++...|+...+.+|..++..++++++
T Consensus 152 ------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~~a~~~~~ 219 (612)
T KOG0603|consen 152 ------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSAEARSLFR 219 (612)
T ss_pred ------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhHHHHHHHH
Confidence 118999999999998 677889999999999999999999988 78889999999999999999999999
Q ss_pred HhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCC-CCCCCC
Q 011287 288 RLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQT-PPKLAS 332 (489)
Q Consensus 288 ~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~-~p~~~~ 332 (489)
.++..+|.+|++++-.+..++++|+||..++|+.+..+. +|++.+
T Consensus 220 ~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp 265 (612)
T KOG0603|consen 220 QLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKP 265 (612)
T ss_pred HHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCC
Confidence 999999999999987789999999999999999886654 444433
No 394
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=8.3e-34 Score=279.25 Aligned_cols=265 Identities=27% Similarity=0.412 Sum_probs=208.3
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcC---CCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEc
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKID---TGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQD 116 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~---tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 116 (489)
+.....|..+.+||+|+|++||+|.+.. .++.||+|.+... .....+.+|.++|..+ .+.||+++.+.+..
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rn 106 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-----SSPSRILNELEMLYRLGGSDNIIKLNGCFRN 106 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-----cCchHHHHHHHHHHHhccchhhhcchhhhcc
Confidence 3456789999999999999999999987 7899999987543 3445688999999998 58999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC-CCCEEEeeccCcccc
Q 011287 117 TFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA-DGHIKIADFGSVKPM 195 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~-~g~ikL~DFG~a~~~ 195 (489)
++.+.+||||++..+..++... ++...++.|++.++.||.++|.+|||||||||+|+|.+. .++-.|+|||+|...
T Consensus 107 nd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 107 NDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred CCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHH
Confidence 9999999999999888777654 789999999999999999999999999999999999985 478999999999732
Q ss_pred CCcc------c----cccC------------------------CCCCCCCccceecCCcCCChhhhcCCC-CCCCCcchh
Q 011287 196 QDSR------I----TVLP------------------------NAASDDKACTFVGTAAYVPPEVLNSSP-ATFGNDLWA 240 (489)
Q Consensus 196 ~~~~------~----~~~~------------------------~~~~~~~~~~~~gt~~Y~aPE~l~~~~-~~~~sDiwS 240 (489)
.... . ...+ +...........||++|+|||++...+ .+.++||||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 2111 0 0000 011122234578999999999997755 688999999
Q ss_pred hhHHHHHHhhCCCCCCCCCH-HHHHHHHHh--------------cC---------------------C------------
Q 011287 241 LGCTLYQMLSGTSPFKDTSE-WLIFQRIIA--------------RD---------------------I------------ 272 (489)
Q Consensus 241 LG~ilyelltG~~PF~~~~~-~~~~~~i~~--------------~~---------------------~------------ 272 (489)
.|||+.-+++++.||-...+ ......|.. +. +
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 99999999999999864322 111100000 00 0
Q ss_pred ----CCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 273 ----RFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 273 ----~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
..-+.++..+.||+++||..||.+|+|| ++.|+||||...+
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitA-----EeALkHpFF~~~~ 388 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITA-----EDALKHPFFDEAD 388 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccH-----HHHhcCcCCcchh
Confidence 0112356789999999999999999999 8899999998544
No 395
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-33 Score=283.68 Aligned_cols=244 Identities=21% Similarity=0.345 Sum_probs=211.8
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
.|...-..||-|-||.||.+.+++..-.||||.++.. .-..+.+..|..+|+.++|||+|+|++++..+...|+|+
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEE
Confidence 3567778999999999999999999999999998543 234556777999999999999999999999999999999
Q ss_pred eccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 125 ESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~--l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
|||..|+|++|+.+..+ ++.-...+++.||..|++||..+++|||||-..|.|+.++..+|++|||+++.+....++.
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTA 422 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTA 422 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceec
Confidence 99999999999987643 7777888899999999999999999999999999999999999999999999987654332
Q ss_pred cCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCCCH
Q 011287 203 LPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYFSD 280 (489)
Q Consensus 203 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~~~ 280 (489)
-.+ .--...|.|||-|....++.++|||+|||+|+|+.| |-.||.+-+-.+.+..+.++ ...-|+++++
T Consensus 423 HAG---------AKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPp 493 (1157)
T KOG4278|consen 423 HAG---------AKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPP 493 (1157)
T ss_pred ccC---------ccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCH
Confidence 111 012456999999999999999999999999999998 99999998887777655443 3456899999
Q ss_pred HHHHHHHHhhccCCCCCCCCC
Q 011287 281 AARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 281 ~~~~Li~~~L~~dP~~R~t~~ 301 (489)
.+.+|++.|++..|+.||+..
T Consensus 494 kVYeLMraCW~WsPsDRPsFa 514 (1157)
T KOG4278|consen 494 KVYELMRACWNWSPSDRPSFA 514 (1157)
T ss_pred HHHHHHHHHhcCCcccCccHH
Confidence 999999999999999999873
No 396
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=296.69 Aligned_cols=255 Identities=30% Similarity=0.485 Sum_probs=225.2
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.+||+.+.++|.|+||.||+|+++.+++..|+|+++.. ......-+..|+.+++.++||||+.+++.+-....+++.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 48999999999999999999999999999999999754 344556677899999999999999999999999999999
Q ss_pred EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
||||.||+|.+.-.-.|++++.++.+.+++.+.+|.|||+.|-+|||||-.|||+++.|.+||+|||.+..+..
T Consensus 91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita------ 164 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA------ 164 (829)
T ss_pred EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh------
Confidence 99999999999888889999999999999999999999999999999999999999999999999999865532
Q ss_pred CCCCCCCCccceecCCcCCChhhh---cCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCC-----
Q 011287 204 PNAASDDKACTFVGTAAYVPPEVL---NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFP----- 275 (489)
Q Consensus 204 ~~~~~~~~~~~~~gt~~Y~aPE~l---~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p----- 275 (489)
.-.+..+|.||+.|||||+. ....|...+|+||+|+...|+---.+|.....+........+..+.-|
T Consensus 165 ----ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk 240 (829)
T KOG0576|consen 165 ----TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDK 240 (829)
T ss_pred ----hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCC
Confidence 23455689999999999986 456799999999999999999888888877777666656666655544
Q ss_pred CCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 276 NYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
..+++.+.+|++.+|-.+|.+||++ +.++.|||...
T Consensus 241 ~kws~~fh~fvK~altknpKkRpta-----eklL~h~fvs~ 276 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTA-----EKLLQHPFVSQ 276 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCCh-----hhheeceeecc
Confidence 3589999999999999999999999 67888999864
No 397
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=294.31 Aligned_cols=254 Identities=20% Similarity=0.336 Sum_probs=219.6
Q ss_pred CCCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCC---cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEE
Q 011287 37 APQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTG---TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFT 113 (489)
Q Consensus 37 ~~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg---~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~ 113 (489)
.....+....-.|.++||.|.||+||.|+.+..| ..||||.++.. ..+.....+..|+.||-+.+||||++|.++
T Consensus 621 eFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--ytekqrrdFL~EAsIMGQFdHPNIIrLEGV 698 (996)
T KOG0196|consen 621 EFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--YTEKQRRDFLSEASIMGQFDHPNIIRLEGV 698 (996)
T ss_pred HhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC--ccHHHHhhhhhhhhhcccCCCCcEEEEEEE
Confidence 3335667778899999999999999999998766 57999999655 345556778889999999999999999999
Q ss_pred EEcCCEEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCc
Q 011287 114 FQDTFSLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 114 ~~~~~~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a 192 (489)
......+.+|+|||++|+|..+|.++ |.|+..++..+++.|+.|+.||-+.|.|||||-..||||+.+-.+|++|||++
T Consensus 699 VTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLS 778 (996)
T KOG0196|consen 699 VTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLS 778 (996)
T ss_pred EecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccce
Confidence 99999999999999999999999875 78999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccccccCCCCCCCCccceec--CCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHh
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVG--TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIA 269 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~g--t~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~ 269 (489)
+.+++... ....+.-| ...|.|||.+..+.++.++||||+|++++|.++ |..||-..+..+.+..|..
T Consensus 779 Rvledd~~---------~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~ 849 (996)
T KOG0196|consen 779 RVLEDDPE---------AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQ 849 (996)
T ss_pred eecccCCC---------ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHh
Confidence 98765431 11111112 357999999999999999999999999999776 9999999999998888766
Q ss_pred c-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 270 R-DIRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 270 ~-~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
+ .++-|-.+|..+.+|+..|+++|-.+||...
T Consensus 850 gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~ 882 (996)
T KOG0196|consen 850 GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFA 882 (996)
T ss_pred ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHH
Confidence 4 2334457899999999999999999999873
No 398
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-32 Score=247.40 Aligned_cols=213 Identities=26% Similarity=0.441 Sum_probs=178.3
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ly 121 (489)
..++..-+..||+|+||.|-+.++..+|...|+|.+..... .+.+..+.+|.++..+. .+|++|.+|+.+.++..++
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn--~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw 121 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN--SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW 121 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC--hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE
Confidence 35677888999999999999999999999999999876543 34455667788876554 7999999999999999999
Q ss_pred EEEeccCCCChHH----HHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CcEeeccCCCCeeeCCCCCEEEeeccCccccC
Q 011287 122 MALESCEGGELFD----QITSKGHLSEDEARFYTAEVVDALEYIHSM-GLIHRDIKPENLLLTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 122 lV~E~~~gg~L~~----~l~~~~~l~e~~~~~i~~qil~aL~~LH~~-gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~ 196 (489)
+.||.|.. +|.. .+.+.+.++|..+-.++..++.||+|||++ .++|||+||+||||+.+|++|+||||.+..+.
T Consensus 122 IcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 122 ICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred EeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 99999965 6654 345567899999999999999999999976 89999999999999999999999999998765
Q ss_pred CccccccCCCCCCCCccc-eecCCcCCChhhhc----CCCCCCCCcchhhhHHHHHHhhCCCCCCC-CCHHHHHHHHHhc
Q 011287 197 DSRITVLPNAASDDKACT-FVGTAAYVPPEVLN----SSPATFGNDLWALGCTLYQMLSGTSPFKD-TSEWLIFQRIIAR 270 (489)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~-~~gt~~Y~aPE~l~----~~~~~~~sDiwSLG~ilyelltG~~PF~~-~~~~~~~~~i~~~ 270 (489)
++- +.+ -.|...|||||.+. ...|+-++||||||+.+.||.+++.||.. .++.+++..+...
T Consensus 201 dSi------------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 201 DSI------------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred hhh------------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 432 112 35778999999985 34689999999999999999999999975 4666676666554
No 399
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=1.5e-30 Score=246.04 Aligned_cols=216 Identities=39% Similarity=0.672 Sum_probs=186.5
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEec
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALES 126 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~ 126 (489)
|.+.+.||.|++|.||+|.+..+++.+|+|.+...... .....+..|...++.++|+|++++++.+......++++|+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 67889999999999999999988999999999765332 2456788899999999999999999999998999999999
Q ss_pred cCCCChHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCC
Q 011287 127 CEGGELFDQITSKGH-LSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPN 205 (489)
Q Consensus 127 ~~gg~L~~~l~~~~~-l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~ 205 (489)
+.+++|.+++..... +++..+..++.+++.+|.+||+.|++|+||+|.||+++.++.++|+|||.+..+....
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~------ 152 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL------ 152 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc------
Confidence 999999999988766 8999999999999999999999999999999999999999999999999988654321
Q ss_pred CCCCCCccceecCCcCCChhhh-cCCCCCCCCcchhhhHHHHHHhhCCCCCCC--CCHHHHHHHHHhcCCC
Q 011287 206 AASDDKACTFVGTAAYVPPEVL-NSSPATFGNDLWALGCTLYQMLSGTSPFKD--TSEWLIFQRIIARDIR 273 (489)
Q Consensus 206 ~~~~~~~~~~~gt~~Y~aPE~l-~~~~~~~~sDiwSLG~ilyelltG~~PF~~--~~~~~~~~~i~~~~~~ 273 (489)
........++..|++||++ ....++.++|+|+||+++|+|++|+.||.. .+...+.+.|..+...
T Consensus 153 ---~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 220 (225)
T smart00221 153 ---AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGVPL 220 (225)
T ss_pred ---cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCCcc
Confidence 0122356788899999999 666778899999999999999999999977 4444667777766533
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=1.8e-30 Score=241.08 Aligned_cols=212 Identities=39% Similarity=0.664 Sum_probs=186.5
Q ss_pred EeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCCCh
Q 011287 53 YGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGEL 132 (489)
Q Consensus 53 LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L 132 (489)
||+|++|.||+++...+|+.+++|++....... ....+.+|...++.+.|++|+++++++......++++|++.|++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999987543221 346688899999999999999999999999999999999999999
Q ss_pred HHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC-CCCEEEeeccCccccCCccccccCCCCCCC
Q 011287 133 FDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA-DGHIKIADFGSVKPMQDSRITVLPNAASDD 210 (489)
Q Consensus 133 ~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~-~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~ 210 (489)
.+++... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++. +++++|+|||.+........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---------- 148 (215)
T cd00180 79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---------- 148 (215)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----------
Confidence 9999876 57999999999999999999999999999999999999999 89999999999876543210
Q ss_pred CccceecCCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Q 011287 211 KACTFVGTAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRL 289 (489)
Q Consensus 211 ~~~~~~gt~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~ 289 (489)
......+...|++||.+... .++.++|+|+||+++++| ..+.+++.+|
T Consensus 149 ~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------~~~~~~l~~~ 197 (215)
T cd00180 149 LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------PELKDLIRKM 197 (215)
T ss_pred hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------HHHHHHHHHH
Confidence 12345678899999999887 788999999999999999 6789999999
Q ss_pred hccCCCCCCCCCCCCHHHHhcCC
Q 011287 290 LDVDPSGRPGAGPGGYAVLKMHP 312 (489)
Q Consensus 290 L~~dP~~R~t~~~~~~~~l~~hp 312 (489)
++.||++||++ +++++|+
T Consensus 198 l~~~p~~R~~~-----~~l~~~~ 215 (215)
T cd00180 198 LQKDPEKRPSA-----KEILEHL 215 (215)
T ss_pred hhCCcccCcCH-----HHHhhCC
Confidence 99999999998 7788764
No 401
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=8.7e-32 Score=267.68 Aligned_cols=241 Identities=22% Similarity=0.341 Sum_probs=191.6
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC--CCCCccEEEEEEEcCC---
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL--DHPGVVRLFFTFQDTF--- 118 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l--~hpnIv~l~~~~~~~~--- 118 (489)
....++..+||+|.||.||+|+. +++.||||++. ....+....|+++.+.. .|+||+++++.-....
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp------~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFP------EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR 280 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc--cCceeEEEecC------HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence 55668899999999999999997 56999999984 44556677788887764 8999999988766444
Q ss_pred -EEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---------CcEeeccCCCCeeeCCCCCEEEee
Q 011287 119 -SLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM---------GLIHRDIKPENLLLTADGHIKIAD 188 (489)
Q Consensus 119 -~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~---------gIiHrDLKpeNILl~~~g~ikL~D 188 (489)
.+++|++|.+.|+|.+++..+ .+++.....++..++.||+|||+. .|+|||||..||||..|++.-|+|
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred cceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 789999999999999999986 699999999999999999999973 499999999999999999999999
Q ss_pred ccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCC------CCCCcchhhhHHHHHHhhCCC---------
Q 011287 189 FGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPA------TFGNDLWALGCTLYQMLSGTS--------- 253 (489)
Q Consensus 189 FG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~------~~~sDiwSLG~ilyelltG~~--------- 253 (489)
||+|..+.... .......-+||..|||||+|.+... -.+.||||+|.+++||++.-.
T Consensus 360 FGLAl~~~p~~--------~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~ 431 (534)
T KOG3653|consen 360 FGLALRLEPGK--------PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPE 431 (534)
T ss_pred cceeEEecCCC--------CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCc
Confidence 99999876432 2223334799999999999976431 245799999999999998532
Q ss_pred ---CCCC-----CCHHHHHHHHH--hcCCCCCCCC-----CHHHHHHHHHhhccCCCCCCCCC
Q 011287 254 ---PFKD-----TSEWLIFQRII--ARDIRFPNYF-----SDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 254 ---PF~~-----~~~~~~~~~i~--~~~~~~p~~~-----~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
||.. .+-.++..... +..+.+|+.+ ...+++.++.|++.||+-|+||+
T Consensus 432 Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~ 494 (534)
T KOG3653|consen 432 YQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG 494 (534)
T ss_pred ccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence 3321 11122222222 3456666543 45689999999999999999984
No 402
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-30 Score=281.96 Aligned_cols=244 Identities=25% Similarity=0.454 Sum_probs=205.8
Q ss_pred CeEEeeEEeeeCceEEEEEEEc---C----CCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcC
Q 011287 46 DFELGKIYGVGSYSKVVRAKKI---D----TGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDT 117 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~---~----tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~ 117 (489)
+..+.+.||+|.||.|++|.-. . ....||||.+...... .....+..|+.+|+.+ .||||+.+++.+...
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 4467789999999999999743 1 1567999998665433 5567788899999998 599999999999999
Q ss_pred CEEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC
Q 011287 118 FSLYMALESCEGGELFDQITSKG----------------HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD 181 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~----------------~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~ 181 (489)
..+++|+|||..|+|..++...+ .++......+++||+.|++||++.+++||||-..|||+..+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN 454 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC
Confidence 99999999999999999998765 38899999999999999999999999999999999999999
Q ss_pred CCEEEeeccCccccCCccccccCCCCCCCCccceec--CCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCC
Q 011287 182 GHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVG--TAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDT 258 (489)
Q Consensus 182 g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~g--t~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~ 258 (489)
..+||+|||+|+........... .-.| ...|||||.+....++.++||||+|++|||+++ |..|+.+.
T Consensus 455 ~~~kIaDFGlar~~~~~~~y~~~---------~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~ 525 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDYYRTK---------SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI 525 (609)
T ss_pred CEEEEccccceeccCCCCceEec---------CCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence 99999999999865443222100 0112 234999999999999999999999999999998 89999985
Q ss_pred C-HHHHHHHHHhcC-CCCCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 259 S-EWLIFQRIIARD-IRFPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 259 ~-~~~~~~~i~~~~-~~~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
. ..+.++.+..+. ...|..+++++.++++.|++.+|++||+.
T Consensus 526 ~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F 569 (609)
T KOG0200|consen 526 PPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTF 569 (609)
T ss_pred CcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCH
Confidence 5 555666665553 57899999999999999999999999988
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-31 Score=246.26 Aligned_cols=236 Identities=22% Similarity=0.376 Sum_probs=186.6
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEE-EEEcCCEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFF-TFQDTFSLY 121 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~-~~~~~~~ly 121 (489)
.+.|.|.+.||+|.||.+.+|.++.++..+++|.+.+.. -....+.+|...--.| .|.||+.-|+ .|+..+.+.
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 356999999999999999999999999999999987753 2344566666543334 5899998876 577888899
Q ss_pred EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC--CCCEEEeeccCccccCCcc
Q 011287 122 MALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA--DGHIKIADFGSVKPMQDSR 199 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~--~g~ikL~DFG~a~~~~~~~ 199 (489)
|++|||+.|+|.+.+...| +-|...+.++.|+++|++|||+.++||||||.+||||-. ..++||||||..+..+..-
T Consensus 99 F~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV 177 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTV 177 (378)
T ss_pred EeeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCcee
Confidence 9999999999999887754 899999999999999999999999999999999999943 3589999999987543211
Q ss_pred ccccCCCCCCCCccceecCCcCCChhhhcCC-----CCCCCCcchhhhHHHHHHhhCCCCCCCCC----HHHHHHHHH-h
Q 011287 200 ITVLPNAASDDKACTFVGTAAYVPPEVLNSS-----PATFGNDLWALGCTLYQMLSGTSPFKDTS----EWLIFQRII-A 269 (489)
Q Consensus 200 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~-----~~~~~sDiwSLG~ilyelltG~~PF~~~~----~~~~~~~i~-~ 269 (489)
...--+..|.+||+.... ...+.+|+|.||+|+|.+|+|.+||.... .+--+.+.. .
T Consensus 178 -------------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~r 244 (378)
T KOG1345|consen 178 -------------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKR 244 (378)
T ss_pred -------------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcc
Confidence 111235679999987432 25778999999999999999999998532 222222222 2
Q ss_pred cCCCCCC---CCCHHHHHHHHHhhccCCCCC
Q 011287 270 RDIRFPN---YFSDAARDLIDRLLDVDPSGR 297 (489)
Q Consensus 270 ~~~~~p~---~~~~~~~~Li~~~L~~dP~~R 297 (489)
.....|. .+++.+..+.++-|..+|++|
T Consensus 245 k~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 245 KNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred cCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 3345554 478999999999999999999
No 404
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6e-30 Score=252.90 Aligned_cols=242 Identities=22% Similarity=0.338 Sum_probs=188.2
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHH--hCCCCCccEEEEEEEcC----
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLD--QLDHPGVVRLFFTFQDT---- 117 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~--~l~hpnIv~l~~~~~~~---- 117 (489)
..+-.+.+.||+|.||+||+|+++ |..||||++... ++ ..-.+|.++.+ .|+|+||+.++..=...
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr----dE--~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR----DE--RSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred hheeEEEEEecCccccceeecccc--CCceEEEEeccc----ch--hhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 456799999999999999999994 899999999543 22 23344555554 46999999988654321
Q ss_pred CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC--------CcEeeccCCCCeeeCCCCCEEEeec
Q 011287 118 FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM--------GLIHRDIKPENLLLTADGHIKIADF 189 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~--------gIiHrDLKpeNILl~~~g~ikL~DF 189 (489)
..+|+|++|-+.|+|+++|++ ..++.+....++..++.||+|||.. .|.|||||..||||..+|.+-|+|+
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 358999999999999999998 5799999999999999999999963 3999999999999999999999999
Q ss_pred cCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCC------CCCCcchhhhHHHHHHhhC----------CC
Q 011287 190 GSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPA------TFGNDLWALGCTLYQMLSG----------TS 253 (489)
Q Consensus 190 G~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~------~~~sDiwSLG~ilyelltG----------~~ 253 (489)
|+|......... -+-..+..|||..|||||+|...-. -..+||||||.+++|++.. ++
T Consensus 361 GLAv~h~~~t~~------idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~ 434 (513)
T KOG2052|consen 361 GLAVRHDSDTDT------IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQL 434 (513)
T ss_pred eeeEEecccCCc------ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcC
Confidence 999876544211 1233456799999999999965431 2458999999999999863 57
Q ss_pred CCCC-----CCHHHHHHHHHh--cCCCCCCCCC-----HHHHHHHHHhhccCCCCCCCC
Q 011287 254 PFKD-----TSEWLIFQRIIA--RDIRFPNYFS-----DAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 254 PF~~-----~~~~~~~~~i~~--~~~~~p~~~~-----~~~~~Li~~~L~~dP~~R~t~ 300 (489)
||.+ .+..++..-++. ..+.+|+.+. ..+..|++.|+..||.-|+||
T Consensus 435 Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltA 493 (513)
T KOG2052|consen 435 PYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTA 493 (513)
T ss_pred CcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHH
Confidence 8854 333444443333 3455666543 235678999999999999998
No 405
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.1e-30 Score=268.84 Aligned_cols=246 Identities=19% Similarity=0.323 Sum_probs=207.1
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCC----cEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTG----TVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg----~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
..+-.++||.|+||+||+|.+.-.| -+||||++..... ......+.+|+.+|.+|+|||+++|+++..... +-
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~--~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS--PKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC--chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 4567789999999999999986544 4678888765432 233456778999999999999999999998765 88
Q ss_pred EEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 122 MALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
+|++|+++|.|.++++.+ +.+-......|.+||++|+.|||.++++||||-..|+||..-.++|++|||+|+.+.....
T Consensus 774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 999999999999999875 6799999999999999999999999999999999999999999999999999998765432
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHHHHhc-CCCCCCCC
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQRIIAR-DIRFPNYF 278 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~i~~~-~~~~p~~~ 278 (489)
..... ..--.+.|||-|.+....|+.++||||+||+++|++| |..|+.+....++-..+..+ .+..|+..
T Consensus 854 ey~~~--------~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiC 925 (1177)
T KOG1025|consen 854 EYSAP--------GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPIC 925 (1177)
T ss_pred ccccc--------ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCc
Confidence 22111 1112346888888899999999999999999999998 99999998887776555443 46788999
Q ss_pred CHHHHHHHHHhhccCCCCCCCCCC
Q 011287 279 SDAARDLIDRLLDVDPSGRPGAGP 302 (489)
Q Consensus 279 ~~~~~~Li~~~L~~dP~~R~t~~~ 302 (489)
+-++..++.+|+-.|+..||++.+
T Consensus 926 tiDVy~~mvkCwmid~~~rp~fke 949 (1177)
T KOG1025|consen 926 TIDVYMVMVKCWMIDADSRPTFKE 949 (1177)
T ss_pred cHHHHHHHHHHhccCcccCccHHH
Confidence 999999999999999999999854
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=1.6e-30 Score=292.02 Aligned_cols=205 Identities=20% Similarity=0.242 Sum_probs=149.5
Q ss_pred CCC-CCccEEEEEE-------EcCCEEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccC
Q 011287 102 LDH-PGVVRLFFTF-------QDTFSLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIK 172 (489)
Q Consensus 102 l~h-pnIv~l~~~~-------~~~~~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLK 172 (489)
+.| +||++++++| .....++++||++ +++|.+++... ..+++..++.++.||+.||.|||++||+|||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK 107 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR 107 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 345 5777888877 2334678889988 55999999753 569999999999999999999999999999999
Q ss_pred CCCeeeCCCCCEEEeeccCccccCCccc---cccC----------------------CCCCCCCccceecCCcCCChhhh
Q 011287 173 PENLLLTADGHIKIADFGSVKPMQDSRI---TVLP----------------------NAASDDKACTFVGTAAYVPPEVL 227 (489)
Q Consensus 173 peNILl~~~g~ikL~DFG~a~~~~~~~~---~~~~----------------------~~~~~~~~~~~~gt~~Y~aPE~l 227 (489)
|+||||+..|.+|++|||++........ ...+ ...........+||+.|+|||++
T Consensus 108 P~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 187 (793)
T PLN00181 108 PSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED 187 (793)
T ss_pred chhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh
Confidence 9999997666665555555433211100 0000 00000112235789999999999
Q ss_pred cCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCC---CCCHHHHHHHHHhhccCCCCCCCCCCCC
Q 011287 228 NSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN---YFSDAARDLIDRLLDVDPSGRPGAGPGG 304 (489)
Q Consensus 228 ~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~Li~~~L~~dP~~R~t~~~~~ 304 (489)
.+..++.++|||||||+||||++|.+||..... .+..+.... +|. .-.+.+.+++.+||++||.+||++
T Consensus 188 ~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~---- 259 (793)
T PLN00181 188 NGSSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRV--LPPQILLNWPKEASFCLWLLHPEPSCRPSM---- 259 (793)
T ss_pred ccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhh--cChhhhhcCHHHHHHHHHhCCCChhhCcCh----
Confidence 999999999999999999999999998864322 222222111 121 124567899999999999999999
Q ss_pred HHHHhcCCCCCC
Q 011287 305 YAVLKMHPFFKG 316 (489)
Q Consensus 305 ~~~l~~hpff~~ 316 (489)
.++++||||..
T Consensus 260 -~eil~h~~~~~ 270 (793)
T PLN00181 260 -SELLQSEFINE 270 (793)
T ss_pred -HHHhhchhhhh
Confidence 89999999975
No 407
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.96 E-value=4.6e-30 Score=275.97 Aligned_cols=243 Identities=36% Similarity=0.573 Sum_probs=197.3
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEE
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYM 122 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lyl 122 (489)
...||..++.|..|+||.||+++++.+.+.+|+|+ +|..+. . ++++.....|++|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~li--------l--Rnilt~a~npfvv-------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLI--------L--RNILTFAGNPFVV-------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcc-cccchh--------h--hccccccCCccee--------------
Confidence 35899999999999999999999999999999954 333111 1 1145555666666
Q ss_pred EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccc
Q 011287 123 ALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITV 202 (489)
Q Consensus 123 V~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~ 202 (489)
||-...++..|+++... +.|++|||+.||+|||+||+|.+|+.-||+|++|||+++..-...-+.
T Consensus 136 -------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 56666666667766544 889999999999999999999999999999999999987542221110
Q ss_pred cC-----CCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCC
Q 011287 203 LP-----NAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNY 277 (489)
Q Consensus 203 ~~-----~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~ 277 (489)
.. ....+......|||+.|.|||++....|+..+|+|++|+|+|+.+.|..||.+.+..+++...+.....+|+.
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~ 280 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEE 280 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccccc
Confidence 00 0111223345699999999999999999999999999999999999999999999999999999988888864
Q ss_pred ---CCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCCC
Q 011287 278 ---FSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQTP 327 (489)
Q Consensus 278 ---~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~ 327 (489)
++++++++|.++|+.+|..|.+.. +..++++|+||+.+||..|..|..
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rlgt~--ga~evk~h~ff~~LDw~~llRqka 331 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRLGTG--GALEVKQHGFFQLLDWKSLLRQKA 331 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhcccc--hhhhhhhccceeecccchhhhhhc
Confidence 789999999999999999999875 668999999999999997655443
No 408
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.95 E-value=1.3e-26 Score=228.06 Aligned_cols=257 Identities=38% Similarity=0.598 Sum_probs=211.2
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCC-CccEEEEEEEcCCEEEEEEe
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP-GVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp-nIv~l~~~~~~~~~lylV~E 125 (489)
|.+.+.||.|+||.||++.+. ..+|+|.+.+...........+.+|..+++.+.|+ +|+++++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 889999999999999999997 88999999877655544567788899999999988 79999999988888999999
Q ss_pred ccCCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC-CEEEeeccCccccCCcccc
Q 011287 126 SCEGGELFDQITSKG---HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG-HIKIADFGSVKPMQDSRIT 201 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~---~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g-~ikL~DFG~a~~~~~~~~~ 201 (489)
++.++++.+++.... .+++..+..++.|++.++.|+|+.|++|||+||+||+++..+ .++++|||.+..+......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999998777764 799999999999999999999999999999999999999988 7999999999855433211
Q ss_pred ccCCCCCCCCccceecCCcCCChhhhcC---CCCCCCCcchhhhHHHHHHhhCCCCCCCCCH----HHHHHHHHhcCCC-
Q 011287 202 VLPNAASDDKACTFVGTAAYVPPEVLNS---SPATFGNDLWALGCTLYQMLSGTSPFKDTSE----WLIFQRIIARDIR- 273 (489)
Q Consensus 202 ~~~~~~~~~~~~~~~gt~~Y~aPE~l~~---~~~~~~sDiwSLG~ilyelltG~~PF~~~~~----~~~~~~i~~~~~~- 273 (489)
... .......+||..|+|||.+.+ ..+....|+||+|++++++++|..||..... ......+......
T Consensus 159 ~~~----~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 159 SSI----PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234 (384)
T ss_pred ccc----cccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc
Confidence 000 013457799999999999987 5788899999999999999999999988763 4555555544433
Q ss_pred CCCCCC--------HHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 274 FPNYFS--------DAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 274 ~p~~~~--------~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
+..... ..+.+++.+++..+|..|.++ .....+++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~-----~~~~~~~~~~ 279 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSS-----SSDLSHDLLA 279 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCH-----HHHhhchHhh
Confidence 222222 579999999999999999988 4555554443
No 409
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=5e-28 Score=221.72 Aligned_cols=158 Identities=25% Similarity=0.267 Sum_probs=130.0
Q ss_pred CChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCC
Q 011287 130 GELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAAS 208 (489)
Q Consensus 130 g~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~ 208 (489)
|+|.+++... +.+++..++.++.||+.||.|||+.+ ||+|||++.++.+++ ||+++.....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----------
Confidence 6899999874 45999999999999999999999998 999999999999999 9998764321
Q ss_pred CCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHH-HHHHHHHhcCCCC-------CCCCCH
Q 011287 209 DDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEW-LIFQRIIARDIRF-------PNYFSD 280 (489)
Q Consensus 209 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~-~~~~~i~~~~~~~-------p~~~~~ 280 (489)
...||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ..+..+....... +..++.
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSA 137 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHh
Confidence 125899999999999999999999999999999999999999765442 2333333322111 222344
Q ss_pred --HHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 281 --AARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 281 --~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
+++++|.+||+.||.+||++ .+++.|+|+.
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~-----~~ll~~~~~~ 169 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAA-----NHYLAHCRAL 169 (176)
T ss_pred hhhHHHHHHHHHhcccccccCH-----HHHHHHHHHH
Confidence 69999999999999999999 8899999874
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=4.8e-29 Score=267.94 Aligned_cols=261 Identities=26% Similarity=0.418 Sum_probs=208.1
Q ss_pred EEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecc---cccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 48 ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKK---FITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 48 ~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~---~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
....++|.|++|.|+.+......+.++.|.+... ..........+..|.-+-..+.|||++.....+++....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 6788999999999999998877777777765421 1222222223556777777889999988877777666666669
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccC
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLP 204 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~ 204 (489)
|||++ ||+.++...+.++..++..++.|++.||.|||+.||.|||+||+|++++.+|.+||+|||.+..+.-..
T Consensus 401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~----- 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW----- 474 (601)
T ss_pred hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc-----
Confidence 99999 999999998899999999999999999999999999999999999999999999999999987664322
Q ss_pred CCCCCCCccceecCCcCCChhhhcCCCCCC-CCcchhhhHHHHHHhhCCCCCCCCCHHHHH--H-------HHHhcCCCC
Q 011287 205 NAASDDKACTFVGTAAYVPPEVLNSSPATF-GNDLWALGCTLYQMLSGTSPFKDTSEWLIF--Q-------RIIARDIRF 274 (489)
Q Consensus 205 ~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~-~sDiwSLG~ilyelltG~~PF~~~~~~~~~--~-------~i~~~~~~~ 274 (489)
+........++|+..|+|||++.+..|++ ..||||.|+|++.|.+|+.||......+.. + ++..+...+
T Consensus 475 -e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (601)
T KOG0590|consen 475 -EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRL 553 (601)
T ss_pred -chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHH
Confidence 11123455789999999999999988865 579999999999999999999876544321 1 111111122
Q ss_pred CCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcc
Q 011287 275 PNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWK 320 (489)
Q Consensus 275 p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~ 320 (489)
-..++...+.+|.+||+.||.+|.|+ ++|++.+||+.++--
T Consensus 554 ~~~lp~~~~~~~~~~l~~~P~~R~ti-----~~i~~d~W~~~i~~c 594 (601)
T KOG0590|consen 554 LSLLPRETRIIIYRMLQLDPTKRITI-----EQILNDEWIRSIECC 594 (601)
T ss_pred HHhchhhHHHHHHHHccCChhheecH-----HHHhhChHhhhcceE
Confidence 23478899999999999999999999 899999999987643
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-25 Score=227.00 Aligned_cols=249 Identities=22% Similarity=0.295 Sum_probs=194.8
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCC-cEEEEEEeecccccchhHHHHHHHHHHHHHhCC----CCCccEEEEEE-EcCCE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTG-TVYALKIMDKKFITKENKTAYVKLERIVLDQLD----HPGVVRLFFTF-QDTFS 119 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg-~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~----hpnIv~l~~~~-~~~~~ 119 (489)
+|.+.+.||+|+||.||+|.+..++ ..+|+|+......... ..+..|..++..+. .+++..+++.+ .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999998774 6899998765422221 15677888888886 26899999999 57888
Q ss_pred EEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC-----CCEEEeeccCc
Q 011287 120 LYMALESCEGGELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-----GHIKIADFGSV 192 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~-----g~ikL~DFG~a 192 (489)
-|+||+.+ |.+|.++.... +.|+..++..++.|++.||++||+.|++||||||+|+++... ..+.|.|||+|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999998 67999988554 579999999999999999999999999999999999999865 36999999999
Q ss_pred c--ccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHH---HHHHHH
Q 011287 193 K--PMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEW---LIFQRI 267 (489)
Q Consensus 193 ~--~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~---~~~~~i 267 (489)
+ .+....... ..........+.||..|+|+.+..+...+.+.|+||++.++.+++.|.+||.+.... ..+...
T Consensus 175 r~~~~~~~~~~~--~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~ 252 (322)
T KOG1164|consen 175 RRFKYVGDSGGN--LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKD 252 (322)
T ss_pred ccccccCCCCcc--cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHH
Confidence 8 432222110 000111134677999999999999999999999999999999999999999876532 222222
Q ss_pred HhcCC-C-CCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 268 IARDI-R-FPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 268 ~~~~~-~-~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
..... . +....+.++.++...+-..+...+|..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy 287 (322)
T KOG1164|consen 253 PRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDY 287 (322)
T ss_pred hhhhccccccCCChHHHHHHHHHhhccCCcCCCCH
Confidence 22211 1 344567788888888888899999876
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=1.8e-26 Score=233.74 Aligned_cols=189 Identities=20% Similarity=0.199 Sum_probs=141.8
Q ss_pred CCCCCCCCCeEEeeEEeeeCceEEEEEEEcC-CCcEEEEEEeecccc--cchhHHHHHHHHHHHHHhCCCCCccE-EEEE
Q 011287 38 PQEHFSIQDFELGKIYGVGSYSKVVRAKKID-TGTVYALKIMDKKFI--TKENKTAYVKLERIVLDQLDHPGVVR-LFFT 113 (489)
Q Consensus 38 ~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~-tg~~vAiK~~~k~~~--~~~~~~~~~~~E~~il~~l~hpnIv~-l~~~ 113 (489)
.+.....++|.+.+.||+|+||+||+|+++. +++.||||++..... ........+.+|+.+|+.++|+||++ ++..
T Consensus 11 ~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~ 90 (365)
T PRK09188 11 DQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT 90 (365)
T ss_pred cccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc
Confidence 3455667899999999999999999999876 788889998753311 12334566889999999999999985 5432
Q ss_pred EEcCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeecc-CCCCeeeCCCCCEEEeeccCc
Q 011287 114 FQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDI-KPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 114 ~~~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDL-KpeNILl~~~g~ikL~DFG~a 192 (489)
...|+|||||+|++|.. +.. .. ...++.|++.||.|||++||+|||| ||+|||++.++.++|+|||+|
T Consensus 91 ----~~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred ----CCcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 45899999999999963 221 11 1467899999999999999999999 999999999999999999999
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhcCCC------CCCCCcch
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP------ATFGNDLW 239 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~------~~~~sDiw 239 (489)
+.+....... .........+.+++..|+|||.+.... .+..+|-|
T Consensus 160 ~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 160 SVFRRRGALY--RIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred eecccCcchh--hhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 9775432110 000011223678999999999986433 23446666
No 413
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=2e-26 Score=211.88 Aligned_cols=252 Identities=19% Similarity=0.281 Sum_probs=205.6
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCC-CCccEEEEEEEcCC
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH-PGVVRLFFTFQDTF 118 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~ 118 (489)
+-+....|.+++.||.|+||.+|+|....+|.+||||+-.+. .....+..|..+.+.|++ .+|..+..++.+..
T Consensus 10 ~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~-----a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ 84 (341)
T KOG1163|consen 10 ELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK-----AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKD 84 (341)
T ss_pred hheeccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc-----CCCcchhHHHHHHHHhccCCCCchhhhhccccc
Confidence 345678899999999999999999999999999999986433 233456778999998865 67888888888888
Q ss_pred EEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC---CEEEeeccCccc
Q 011287 119 SLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG---HIKIADFGSVKP 194 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g---~ikL~DFG~a~~ 194 (489)
.-.+||+.+ |.+|.++.+-. ..|+..++..++-|++.-++|+|.++++||||||+|+|..-+- .+.|+|||+|+.
T Consensus 85 ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk 163 (341)
T KOG1163|consen 85 YNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK 163 (341)
T ss_pred cceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhh
Confidence 889999999 66998887643 5699999999999999999999999999999999999997543 589999999998
Q ss_pred cCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC---HHHHHHHHHhcC
Q 011287 195 MQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS---EWLIFQRIIARD 271 (489)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~---~~~~~~~i~~~~ 271 (489)
+.+.....- -.-.......||+.|.|--...+...+...|+-|+|.++..+..|.+||.+.. ..+-+.+|....
T Consensus 164 y~d~~t~~H---Ipyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK 240 (341)
T KOG1163|consen 164 YRDIRTRQH---IPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKK 240 (341)
T ss_pred hcccccccc---CccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhh
Confidence 865432110 01123446789999999888888888889999999999999999999998754 445566777666
Q ss_pred CCCC-----CCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 272 IRFP-----NYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 272 ~~~p-----~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
...| .++|.++.-.+..|-..--++-|.-
T Consensus 241 ~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 241 MSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred cCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcH
Confidence 5544 6789999999999988777777754
No 414
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.94 E-value=1.4e-26 Score=225.47 Aligned_cols=250 Identities=15% Similarity=0.260 Sum_probs=205.1
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCC-----CcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEE-
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDT-----GTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQ- 115 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~t-----g~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~- 115 (489)
+...+++...++-+|.||.||.|.+++. .+.|-+|.++.. ..+-....+..|.-.+..+.|||+.++.++..
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 3456789999999999999999977643 244556655332 23344556677888888899999999988764
Q ss_pred cCCEEEEEEeccCCCChHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEe
Q 011287 116 DTFSLYMALESCEGGELFDQITSK--------GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIA 187 (489)
Q Consensus 116 ~~~~lylV~E~~~gg~L~~~l~~~--------~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~ 187 (489)
+....+.++.+..-|+|..++... ..++..+...++.|++.|++|||.+||||.||-..|.+|++.-.+||+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVklt 438 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLT 438 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEec
Confidence 556677888899889999999732 247788888999999999999999999999999999999999999999
Q ss_pred eccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhh-CCCCCCCCCHHHHHHH
Q 011287 188 DFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLS-GTSPFKDTSEWLIFQR 266 (489)
Q Consensus 188 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyellt-G~~PF~~~~~~~~~~~ 266 (489)
|=.+++.+-+.++....+.. -....|||||.+....|+.++|+|||||+++||+| |+.|+..-++.++..-
T Consensus 439 DsaLSRDLFP~DYhcLGDnE--------nRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y 510 (563)
T KOG1024|consen 439 DSALSRDLFPGDYHCLGDNE--------NRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY 510 (563)
T ss_pred cchhccccCcccccccCCCC--------CCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH
Confidence 99999877655444322111 12457999999999999999999999999999998 9999999999999887
Q ss_pred HHhc-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 267 IIAR-DIRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 267 i~~~-~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
+.++ .+..|-++|+++..++..|+..+|++||+..
T Consensus 511 lkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~ 546 (563)
T KOG1024|consen 511 LKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFS 546 (563)
T ss_pred HhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHH
Confidence 7765 3556889999999999999999999999983
No 415
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.94 E-value=2.3e-25 Score=213.36 Aligned_cols=247 Identities=21% Similarity=0.322 Sum_probs=197.6
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCEEEEE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~lylV 123 (489)
-.|.+++.||+|+||+++.|++.-++++||||.-..+ ...-++..|....+.| ..++|..+|.+.+...+-.+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 4699999999999999999999999999999975433 2334566788888877 579999999998988888899
Q ss_pred EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC-----CEEEeeccCccccCC
Q 011287 124 LESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG-----HIKIADFGSVKPMQD 197 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g-----~ikL~DFG~a~~~~~ 197 (489)
+|.+ |.+|.++..-. .+|+..++..+|.|++.-++++|++.+|+|||||+|+||...+ .|.++|||+|+.+.+
T Consensus 103 idLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred hhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 9998 66888877655 3599999999999999999999999999999999999997543 589999999998876
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCC---CCHHHHHHHHHhcCCC-
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKD---TSEWLIFQRIIARDIR- 273 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~---~~~~~~~~~i~~~~~~- 273 (489)
+....- -.-....+..||+.|||--...+...+...|+-|||-++++.|.|.+||.+ .+..+-+++|-...-.
T Consensus 182 p~TkqH---IPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 182 PKTKQH---IPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST 258 (449)
T ss_pred cccccc---CccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC
Confidence 542110 011334577899999999999999999999999999999999999999976 5666777777553322
Q ss_pred ----CCCCCCHHHHHHHHHhhccCCCCCCCC
Q 011287 274 ----FPNYFSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 274 ----~p~~~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
+..++|.++..-++-.-..+-.+-|..
T Consensus 259 ~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDY 289 (449)
T KOG1165|consen 259 PIEVLCEGFPEEFATYLRYVRRLDFFETPDY 289 (449)
T ss_pred CHHHHHhcCHHHHHHHHHHHHhcCcccCCCH
Confidence 234567676666665555555555543
No 416
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.4e-25 Score=217.55 Aligned_cols=268 Identities=25% Similarity=0.413 Sum_probs=189.1
Q ss_pred CCCCCCCeEEeeEEeeeCceEEEEEEEcCCC-----------------------------------cEEEEEEeeccccc
Q 011287 40 EHFSIQDFELGKIYGVGSYSKVVRAKKIDTG-----------------------------------TVYALKIMDKKFIT 84 (489)
Q Consensus 40 ~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg-----------------------------------~~vAiK~~~k~~~~ 84 (489)
.+++++||+|+..||+|+-+.||.|+....| -+.|||.|-.-...
T Consensus 152 skFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~ 231 (598)
T KOG4158|consen 152 SKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHD 231 (598)
T ss_pred cccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccC
Confidence 6899999999999999999999999865432 13466655321111
Q ss_pred c--hhHHHHHHHHH------------H--HHHh--------CCCCCccEEEEEEEc------------------------
Q 011287 85 K--ENKTAYVKLER------------I--VLDQ--------LDHPGVVRLFFTFQD------------------------ 116 (489)
Q Consensus 85 ~--~~~~~~~~~E~------------~--il~~--------l~hpnIv~l~~~~~~------------------------ 116 (489)
. .......-+|. . ..+. -.|||||+++..|.+
T Consensus 232 s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g 311 (598)
T KOG4158|consen 232 SGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSG 311 (598)
T ss_pred CchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccc
Confidence 1 00111111111 0 0111 269999999877743
Q ss_pred ---CCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeC--CCC--CEEEeec
Q 011287 117 ---TFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLT--ADG--HIKIADF 189 (489)
Q Consensus 117 ---~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~--~~g--~ikL~DF 189 (489)
...+|+||...+. +|.+++-.+ ..+....+.+++|+++|+.|||++||.|||+|.+||||. +|+ .+.|+||
T Consensus 312 ~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDF 389 (598)
T KOG4158|consen 312 AGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADF 389 (598)
T ss_pred cCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccc
Confidence 3468999998876 999998764 578889999999999999999999999999999999985 333 5899999
Q ss_pred cCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCC------CCCCCcchhhhHHHHHHhhCCCCCCCCCHHHH
Q 011287 190 GSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP------ATFGNDLWALGCTLYQMLSGTSPFKDTSEWLI 263 (489)
Q Consensus 190 G~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~------~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~ 263 (489)
|++-.-+........ ....-..-|...-||||+....+ .-.++|.|+.|.+.||+++...||.+..+...
T Consensus 390 GCcLAd~~hGlqlpy----~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L 465 (598)
T KOG4158|consen 390 GCCLADDNHGLQLPY----ESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL 465 (598)
T ss_pred ceeeecccccccccc----ccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee
Confidence 998654332222111 11122345788899999986543 13579999999999999999999988555332
Q ss_pred HHH-H-HhcCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 264 FQR-I-IARDIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 264 ~~~-i-~~~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
--+ . ...-+.+|+.+++.+++||..+|+.||++|+++.- .+.+++--.|.
T Consensus 466 ~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~i--AANvl~LsLw~ 517 (598)
T KOG4158|consen 466 DTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNI--AANVLNLSLWR 517 (598)
T ss_pred chhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccH--HHhHHHHHHhc
Confidence 111 1 12234578899999999999999999999999843 24455443333
No 417
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.91 E-value=3.6e-24 Score=208.54 Aligned_cols=234 Identities=27% Similarity=0.408 Sum_probs=153.6
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC----------CCCccEEEEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD----------HPGVVRLFFTFQ 115 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~----------hpnIv~l~~~~~ 115 (489)
....++.||.|+++.||.+++.+||+++|+|++...........+.+++|......+. |-.++-.++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 5688999999999999999999999999999987665445555666666665444432 212222222221
Q ss_pred ---------cC---C-----EEEEEEeccCCCChHHHHH---hCCCC---CHHHH-HHHHHHHHHHHHHHHhCCcEeecc
Q 011287 116 ---------DT---F-----SLYMALESCEGGELFDQIT---SKGHL---SEDEA-RFYTAEVVDALEYIHSMGLIHRDI 171 (489)
Q Consensus 116 ---------~~---~-----~lylV~E~~~gg~L~~~l~---~~~~l---~e~~~-~~i~~qil~aL~~LH~~gIiHrDL 171 (489)
.. . +.+++|+-+. +||.+++. ..... ....+ ..+..|++..+++||..|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1 2367888885 48877654 22222 12233 344589999999999999999999
Q ss_pred CCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCC--------CCCCCCcchhhhH
Q 011287 172 KPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS--------PATFGNDLWALGC 243 (489)
Q Consensus 172 KpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~--------~~~~~sDiwSLG~ 243 (489)
+|+|++++.+|.++|+||+.+....... .....+..|.+||..... .++.+.|.|+||+
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~~-------------~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~ 238 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTRY-------------RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGI 238 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEEE-------------EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCcee-------------eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence 9999999999999999999876543211 112345779999987442 3688889999999
Q ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhhccCCCCC
Q 011287 244 TLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRLLDVDPSGR 297 (489)
Q Consensus 244 ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L~~dP~~R 297 (489)
+||.|+||+.||.......... ..+.....+|..+++||+.||+.||.+|
T Consensus 239 ~ly~lWC~~lPf~~~~~~~~~~----~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 239 TLYSLWCGRLPFGLSSPEADPE----WDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHSS-STCCCGGGSTSG----GGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHccCCCCCCCcccccc----ccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999999998654321111 0333344789999999999999999988
No 418
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91 E-value=4.8e-24 Score=198.49 Aligned_cols=142 Identities=20% Similarity=0.228 Sum_probs=113.1
Q ss_pred eeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchh-----------------------HHHHHHHHHHHHHhCCCCC
Q 011287 50 GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKEN-----------------------KTAYVKLERIVLDQLDHPG 106 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~-----------------------~~~~~~~E~~il~~l~hpn 106 (489)
...||+|+||.||+|.+. +|+.||||++......... .......|..++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999997 8999999999765322111 0123456999999998777
Q ss_pred ccEEEEEEEcCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HhCCcEeeccCCCCeeeCCCCCEE
Q 011287 107 VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI-HSMGLIHRDIKPENLLLTADGHIK 185 (489)
Q Consensus 107 Iv~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~L-H~~gIiHrDLKpeNILl~~~g~ik 185 (489)
+.......... .++||||++|+++...+.+.+.+++..+..++.|++.+|.+| |+.||+||||||+|||++ ++.++
T Consensus 81 v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~ 157 (190)
T cd05147 81 IPCPEPILLKS--HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY 157 (190)
T ss_pred CCCCcEEEecC--CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence 64433322222 389999999988776655567899999999999999999999 799999999999999998 57999
Q ss_pred EeeccCcccc
Q 011287 186 IADFGSVKPM 195 (489)
Q Consensus 186 L~DFG~a~~~ 195 (489)
|+|||+|...
T Consensus 158 LiDFG~a~~~ 167 (190)
T cd05147 158 IIDVSQSVEH 167 (190)
T ss_pred EEEccccccC
Confidence 9999999754
No 419
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90 E-value=1e-23 Score=199.54 Aligned_cols=176 Identities=20% Similarity=0.233 Sum_probs=137.7
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHH------HHHHHHHHHhCCCCCccEEEEEE
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY------VKLERIVLDQLDHPGVVRLFFTF 114 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~ 114 (489)
.+.-.+|++.++||.|+||.||++.. ++..+|+|++.......+..... ..+|+..+.++.||+|..+..++
T Consensus 27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~ 104 (232)
T PRK10359 27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFY 104 (232)
T ss_pred HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEee
Confidence 34567899999999999999999755 47789999997665554444333 57899999999999999998887
Q ss_pred EcC--------CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEE
Q 011287 115 QDT--------FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186 (489)
Q Consensus 115 ~~~--------~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL 186 (489)
.+. ...++||||++|.+|.+.. .+++. ...+++.+|..||+.|++|||+||+||+++.+| ++|
T Consensus 105 ~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~l 175 (232)
T PRK10359 105 LLAERKTLRYAHTYIMLIEYIEGVELNDMP----EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRI 175 (232)
T ss_pred eecccccccccCCeEEEEEEECCccHHHhh----hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEE
Confidence 643 3579999999999997763 23432 456999999999999999999999999999998 999
Q ss_pred eeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHh
Q 011287 187 ADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQML 249 (489)
Q Consensus 187 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyell 249 (489)
+|||......... .. ..++....+..++|+||||+++..+.
T Consensus 176 iDfg~~~~~~e~~------------a~----------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 176 IDLSGKRCTAQRK------------AK----------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EECCCcccccchh------------hH----------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999876542211 00 11344555667899999999886654
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.90 E-value=3.6e-23 Score=192.75 Aligned_cols=144 Identities=21% Similarity=0.201 Sum_probs=115.3
Q ss_pred EeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccch-----------------------hHHHHHHHHHHHHHhCCCC
Q 011287 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE-----------------------NKTAYVKLERIVLDQLDHP 105 (489)
Q Consensus 49 ~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~-----------------------~~~~~~~~E~~il~~l~hp 105 (489)
+.+.||+|++|+||+|++. +|+.||||++........ .......+|...+.++.|+
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 899999999986532110 0122346788999999999
Q ss_pred CccEEEEEEEcCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCE
Q 011287 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHI 184 (489)
Q Consensus 106 nIv~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~i 184 (489)
+|.....+.... .|+||||++|+++.......+.+++..+..++.|++.+|.+||+ .||+||||||+|||++ ++.+
T Consensus 80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~ 156 (190)
T cd05145 80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKP 156 (190)
T ss_pred CCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCE
Confidence 875444333332 48999999988665443344678999999999999999999999 9999999999999998 8999
Q ss_pred EEeeccCccccC
Q 011287 185 KIADFGSVKPMQ 196 (489)
Q Consensus 185 kL~DFG~a~~~~ 196 (489)
+|+|||+|..+.
T Consensus 157 ~liDFG~a~~~~ 168 (190)
T cd05145 157 YIIDVSQAVELD 168 (190)
T ss_pred EEEEcccceecC
Confidence 999999998654
No 421
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.89 E-value=1.1e-23 Score=227.09 Aligned_cols=287 Identities=33% Similarity=0.477 Sum_probs=240.8
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEE
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSL 120 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~l 120 (489)
.-+.++|.+.+-+-+|+++.++.+.-..+|...++|+..+.........+.+..+..++-...+|.++.....|.-...+
T Consensus 800 rsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~ 879 (1205)
T KOG0606|consen 800 RSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPL 879 (1205)
T ss_pred cCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCc
Confidence 35789999999999999999999999999999999987665444444445555566666556778888777777777889
Q ss_pred EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 121 YMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 121 ylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
++|++|+.+++|...+...+..+++-++.++..++.++++||...+.|||++|.|+++..+|+.+++|||+......-..
T Consensus 880 ~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 880 PLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred chhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccC
Confidence 99999999999999999999899999999999999999999999999999999999999999999999995543321100
Q ss_pred cc-------------cC------C--CCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCC
Q 011287 201 TV-------------LP------N--AASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTS 259 (489)
Q Consensus 201 ~~-------------~~------~--~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~ 259 (489)
.. .. . ..........+||+.|.+||.+.+.....++|+|++|+++++.++|.+||.+..
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 00 00 0 001133556799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCC---CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcccccCCCCCC
Q 011287 260 EWLIFQRIIARDIRFPN---YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWKNIRGQTPPK 329 (489)
Q Consensus 260 ~~~~~~~i~~~~~~~p~---~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~~~~~~~~p~ 329 (489)
...+++.|.......|. ..+.++++++.++|..+|.+|.++. +..++..|+||++++|+++..+..+.
T Consensus 1040 pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~--~~~e~k~~~~~~~~~~~~l~~q~~~~ 1110 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK--GAAEVKGHPFFQDVDWENLALQKAEF 1110 (1205)
T ss_pred hhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc--cccccccCCccCCCCccccccccCcc
Confidence 99999999999888775 4799999999999999999999984 44689999999999999998876544
No 422
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.88 E-value=1.5e-23 Score=226.26 Aligned_cols=234 Identities=24% Similarity=0.396 Sum_probs=178.0
Q ss_pred CeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeeccc--ccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 46 DFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKF--ITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~--~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
+|...+.||.+.|=.|.+|++.+ |. |+||++-+.. +.-....+.+. |+. ...++|||.+++..+.......|+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~-~ik-~~l~~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLE-EIK-FALMKAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHH-HHH-HHhhcCCcccchHHHHHhhHHHHHH
Confidence 79999999999999999999865 44 9999997653 22222233333 444 6667999999998887778889999
Q ss_pred EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCcccccc
Q 011287 124 LESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVL 203 (489)
Q Consensus 124 ~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~ 203 (489)
-+|... +|.+.+..+..+..-+.+.|+.||+.||..+|..||+|||||.|||||+.=.-+.|+||..-+.. ..
T Consensus 100 Rqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPt------YL 172 (1431)
T KOG1240|consen 100 RQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPT------YL 172 (1431)
T ss_pred HHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCc------cC
Confidence 999976 99999998888999999999999999999999999999999999999999889999999876521 01
Q ss_pred CCCCCCCCcccee----cCCcCCChhhhcCC----------C-CCCCCcchhhhHHHHHHhh-CCCCCCCC---------
Q 011287 204 PNAASDDKACTFV----GTAAYVPPEVLNSS----------P-ATFGNDLWALGCTLYQMLS-GTSPFKDT--------- 258 (489)
Q Consensus 204 ~~~~~~~~~~~~~----gt~~Y~aPE~l~~~----------~-~~~~sDiwSLG~ilyellt-G~~PF~~~--------- 258 (489)
+. .......-|- .-..|.|||.+... + .+++-||||+||+++||++ |++||.-.
T Consensus 173 Pe-DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~ 251 (1431)
T KOG1240|consen 173 PE-DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN 251 (1431)
T ss_pred CC-CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC
Confidence 10 1111111222 23469999987431 1 4677899999999999988 79999521
Q ss_pred --CHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 259 --SEWLIFQRIIARDIRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 259 --~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
+....+.+| -+..++.||..|++.||++|++|+
T Consensus 252 ~~~~e~~Le~I----------ed~~~Rnlil~Mi~rdPs~RlSAe 286 (1431)
T KOG1240|consen 252 ADDPEQLLEKI----------EDVSLRNLILSMIQRDPSKRLSAE 286 (1431)
T ss_pred ccCHHHHHHhC----------cCccHHHHHHHHHccCchhccCHH
Confidence 111111121 134789999999999999999993
No 423
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=5.4e-22 Score=184.27 Aligned_cols=201 Identities=14% Similarity=0.152 Sum_probs=143.8
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchh-HHHHHHHHHHHHHhCC-CCCccEEEEEEEcCCEEEEEE
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKEN-KTAYVKLERIVLDQLD-HPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~-~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~lylV~ 124 (489)
+.+...|++|+||+||++.. .+.+++.+.+.-....... ....+.+|+.+|++|. |++|.+++++ ...|++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 45778999999999998876 6788887776543221111 1235788999999995 5889999886 3479999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeecc-CCCCeeeCCCCCEEEeeccCccccCCccc--c
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDI-KPENLLLTADGHIKIADFGSVKPMQDSRI--T 201 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDL-KpeNILl~~~g~ikL~DFG~a~~~~~~~~--~ 201 (489)
||+.|.+|...+.. . ...++.|++.+|.+||++||+|||| ||+|||++.+|+++|+|||+|........ .
T Consensus 78 eyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 78 SYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred eeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 99999888654321 1 1357889999999999999999999 79999999999999999999985443210 0
Q ss_pred ccC-CCCCCCCccceecCCcCCChhhhcC--CCCCCCCcchhhhHHHHHHhhCCCCCCCCCH
Q 011287 202 VLP-NAASDDKACTFVGTAAYVPPEVLNS--SPATFGNDLWALGCTLYQMLSGTSPFKDTSE 260 (489)
Q Consensus 202 ~~~-~~~~~~~~~~~~gt~~Y~aPE~l~~--~~~~~~sDiwSLG~ilyelltG~~PF~~~~~ 260 (489)
... ..-..-...-...++.|++|+...- ..--...++++.|+-+|.++|+..|+-+.++
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~ 212 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE 212 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence 000 0000000011236788888886532 2222567999999999999999999866543
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.86 E-value=6.1e-21 Score=179.74 Aligned_cols=136 Identities=16% Similarity=0.175 Sum_probs=108.9
Q ss_pred EEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-----CCCCccEEEEEEEcCC---E
Q 011287 48 ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-----DHPGVVRLFFTFQDTF---S 119 (489)
Q Consensus 48 ~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-----~hpnIv~l~~~~~~~~---~ 119 (489)
.-.+.||+|+||.||. +..++.. +||++.... ......+.+|+.+++.+ .||||+++|++++++. .
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~ 78 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY 78 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence 3457899999999995 7777666 699886542 22345688999999999 6799999999999874 4
Q ss_pred EE-EEEec--cCCCChHHHHHhCCCCCHHHHHHHHHHHHHHH-HHHHhCCcEeeccCCCCeeeCCC----CCEEEeeccC
Q 011287 120 LY-MALES--CEGGELFDQITSKGHLSEDEARFYTAEVVDAL-EYIHSMGLIHRDIKPENLLLTAD----GHIKIADFGS 191 (489)
Q Consensus 120 ly-lV~E~--~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL-~~LH~~gIiHrDLKpeNILl~~~----g~ikL~DFG~ 191 (489)
++ +|||| +.+|+|.+++.+ +.+++. ..++.|++.++ +|||+++|+||||||+|||++.+ +.++|+||+-
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 44 78999 557999999976 457766 35678888887 99999999999999999999743 3799999544
Q ss_pred c
Q 011287 192 V 192 (489)
Q Consensus 192 a 192 (489)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 3
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=3.7e-21 Score=211.43 Aligned_cols=225 Identities=25% Similarity=0.344 Sum_probs=173.4
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC---CCCccEEEEEEEcC
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD---HPGVVRLFFTFQDT 117 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~---hpnIv~l~~~~~~~ 117 (489)
.+....|.|-+.||+|+||.||.|.... |+.||+|+-.......- ..-.+++.+|+ -+.|..+...+.-.
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEf------YI~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEF------YICLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceee------eehHHHHHhhchhhhcchHHHHHHHccC
Confidence 3456789999999999999999999977 99999998654433222 12334455554 23455555555555
Q ss_pred CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC-------CCCEEEeecc
Q 011287 118 FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA-------DGHIKIADFG 190 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~-------~g~ikL~DFG 190 (489)
+.-++|+||.+.|+|.++++..+.+++..+.+++.|++..|++||..||||+||||.|+||.. .--++|+|||
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred CcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecc
Confidence 667899999999999999998888999999999999999999999999999999999999953 2359999999
Q ss_pred CccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhc
Q 011287 191 SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIAR 270 (489)
Q Consensus 191 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~ 270 (489)
.+..+..- +...+....++|-.+-++|++.++++++.+|.|.|+.+++-||.|+.- + ...+
T Consensus 847 ~siDm~lf--------p~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~----------q-~~~g 907 (974)
T KOG1166|consen 847 RSIDMKLF--------PDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM----------E-VKNG 907 (974)
T ss_pred cceeeeEc--------CCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH----------H-hcCC
Confidence 98765332 123455677899999999999999999999999999999999998521 1 1111
Q ss_pred -----CCCCCCCCCHH-HHHHHHHhhc
Q 011287 271 -----DIRFPNYFSDA-ARDLIDRLLD 291 (489)
Q Consensus 271 -----~~~~p~~~~~~-~~~Li~~~L~ 291 (489)
...+|..+..+ .-+++..+|+
T Consensus 908 ~~~~~~~~~~Ry~~~~~W~~~F~~lLN 934 (974)
T KOG1166|consen 908 SSWMVKTNFPRYWKRDMWNKFFDLLLN 934 (974)
T ss_pred cceeccccchhhhhHHHHHHHHHHHhC
Confidence 11244444444 4578888887
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.84 E-value=1.3e-20 Score=181.36 Aligned_cols=145 Identities=19% Similarity=0.191 Sum_probs=116.0
Q ss_pred CeEEeeEEeeeCceEEEEEE-EcCCCcEEEEEEeecccccc---------------------hhHHHHHHHHHHHHHhCC
Q 011287 46 DFELGKIYGVGSYSKVVRAK-KIDTGTVYALKIMDKKFITK---------------------ENKTAYVKLERIVLDQLD 103 (489)
Q Consensus 46 dy~~~~~LG~G~~g~Vy~a~-~~~tg~~vAiK~~~k~~~~~---------------------~~~~~~~~~E~~il~~l~ 103 (489)
.|.+.+.||+|+||.||+|. +..+|+.||+|++....... ......+.+|..++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999 66789999999987542110 001234567999999997
Q ss_pred CCC--ccEEEEEEEcCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC-cEeeccCCCCeeeCC
Q 011287 104 HPG--VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMG-LIHRDIKPENLLLTA 180 (489)
Q Consensus 104 hpn--Iv~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~g-IiHrDLKpeNILl~~ 180 (489)
+.+ +.+++.. ...|+||||+.|++|.........+....+..++.||+.+|.+||+.| |+||||||+||+++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 533 3444432 235899999999888776545556777788999999999999999999 99999999999999
Q ss_pred CCCEEEeeccCcccc
Q 011287 181 DGHIKIADFGSVKPM 195 (489)
Q Consensus 181 ~g~ikL~DFG~a~~~ 195 (489)
++.++|+|||.|...
T Consensus 184 ~~~i~LiDFg~a~~~ 198 (237)
T smart00090 184 DGKVVIIDVSQSVEL 198 (237)
T ss_pred CCCEEEEEChhhhcc
Confidence 889999999998754
No 427
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.84 E-value=7.5e-22 Score=200.48 Aligned_cols=170 Identities=29% Similarity=0.436 Sum_probs=132.0
Q ss_pred EEEEEEeccCCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCcccc
Q 011287 119 SLYMALESCEGGELFDQITSKG---HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPM 195 (489)
Q Consensus 119 ~lylV~E~~~gg~L~~~l~~~~---~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~ 195 (489)
++|+.|++|+..+|.++|.+.. ..+......++.|+..|++| +|.+|||+||.||+...+..+||.|||++...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 4789999999999999997543 36777889999999999999 99999999999999999999999999998765
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHH-HHHHHHHhcCCCC
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEW-LIFQRIIARDIRF 274 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~-~~~~~i~~~~~~~ 274 (489)
.... ............+||..||+||.+.+..|+.++||||||+|+|||+. +|....+. .++.-+..+ .+
T Consensus 407 ~~~~----~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T~~er~~t~~d~r~g--~i 477 (516)
T KOG1033|consen 407 DKDE----TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFSTQFERIATLTDIRDG--II 477 (516)
T ss_pred ccCC----cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---HhccHHHHHHhhhhhhcC--CC
Confidence 4432 11122335557799999999999999999999999999999999997 23222111 122222222 33
Q ss_pred CCC---CCHHHHHHHHHhhccCCCCCCCC
Q 011287 275 PNY---FSDAARDLIDRLLDVDPSGRPGA 300 (489)
Q Consensus 275 p~~---~~~~~~~Li~~~L~~dP~~R~t~ 300 (489)
|+. -.++-.+|+..||.+.|.+||++
T Consensus 478 p~~~~~d~p~e~~ll~~lls~~p~~RP~~ 506 (516)
T KOG1033|consen 478 PPEFLQDYPEEYTLLQQLLSPSPEERPSA 506 (516)
T ss_pred ChHHhhcCcHHHHHHHHhcCCCcccCchH
Confidence 321 13556799999999999999966
No 428
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=1.8e-21 Score=209.61 Aligned_cols=260 Identities=27% Similarity=0.397 Sum_probs=210.1
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEc-CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCCEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKI-DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~-~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~ly 121 (489)
...|.+.+.||+|+|+.|-++... .+...+|+|.+.... ........+..|..+-..+. |+|++.+++...+....+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 467888888999999999999884 455667777665443 22334445555777777776 999999999999999999
Q ss_pred EEEeccCCCChHHHH-HhCC-CCCHHHHHHHHHHHHHHHHHHH-hCCcEeeccCCCCeeeCCCC-CEEEeeccCccccCC
Q 011287 122 MALESCEGGELFDQI-TSKG-HLSEDEARFYTAEVVDALEYIH-SMGLIHRDIKPENLLLTADG-HIKIADFGSVKPMQD 197 (489)
Q Consensus 122 lV~E~~~gg~L~~~l-~~~~-~l~e~~~~~i~~qil~aL~~LH-~~gIiHrDLKpeNILl~~~g-~ikL~DFG~a~~~~~ 197 (489)
++++|..|+++++.+ .... ..+...+..++.|+..++.|+| ..++.||||||+|.+++..+ .++++|||+|..+..
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999999998 5554 6889999999999999999999 99999999999999999999 999999999987655
Q ss_pred ccccccCCCCCCCCccceec-CCcCCChhhhcCC-CCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHH-H-HHhc---
Q 011287 198 SRITVLPNAASDDKACTFVG-TAAYVPPEVLNSS-PATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQ-R-IIAR--- 270 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~g-t~~Y~aPE~l~~~-~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~-~-i~~~--- 270 (489)
.. .........+| ++.|+|||.+.+. ...+..|+||+|+++..+++|..|+.......... . +...
T Consensus 178 ~~-------g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 250 (601)
T KOG0590|consen 178 KN-------GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRF 250 (601)
T ss_pred cC-------CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccccc
Confidence 21 12334445678 9999999999885 45778899999999999999999997654433211 1 1111
Q ss_pred CCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 271 DIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 271 ~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
.......++..+.+++.++|..+|..|.+. +++..+||+..
T Consensus 251 ~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~-----~~~~~d~~~~~ 291 (601)
T KOG0590|consen 251 TQLPWNSISDQAHDLLHKILKENPSNRLSI-----EELKLDNWLSS 291 (601)
T ss_pred ccCccccCChhhhhcccccccCCchhcccc-----ccccccccccc
Confidence 233446789999999999999999999998 77999999987
No 429
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=8.3e-19 Score=165.62 Aligned_cols=138 Identities=24% Similarity=0.301 Sum_probs=115.0
Q ss_pred eeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccc-----hhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEE
Q 011287 50 GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-----ENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMAL 124 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~ 124 (489)
++.||+|++|.||+|.+ +|..+++|+........ ......+.+|..++..+.|++|.....++.+....++||
T Consensus 1 ~~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 1 MKLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred CcccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence 36799999999999987 68889999865432211 112345677999999999999877776777777889999
Q ss_pred eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 125 ESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 125 E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
||++|++|.+.+..... ....++.+++.+|.+||+.|++|||++|.|||++ ++.++|+|||.+..
T Consensus 79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999998876432 7888999999999999999999999999999998 88999999999874
No 430
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.79 E-value=1.5e-19 Score=169.21 Aligned_cols=240 Identities=17% Similarity=0.268 Sum_probs=192.0
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLY 121 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ly 121 (489)
+.+.+..+..+|.+.-.|+.|++++. |..+++|++........ ....+..|.-.|+-..||||+.+++.+....++.
T Consensus 187 id~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~r-isrdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 187 IDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTAR-ISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred cchhhhhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcchh-hcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 34556677888899999999999995 55677888865543332 3345666888888889999999999999999999
Q ss_pred EEEeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCC--cEeeccCCCCeeeCCCCCEEE--eeccCcccc
Q 011287 122 MALESCEGGELFDQITSKGH--LSEDEARFYTAEVVDALEYIHSMG--LIHRDIKPENLLLTADGHIKI--ADFGSVKPM 195 (489)
Q Consensus 122 lV~E~~~gg~L~~~l~~~~~--l~e~~~~~i~~qil~aL~~LH~~g--IiHrDLKpeNILl~~~g~ikL--~DFG~a~~~ 195 (489)
++..|++-|+|+.++..... .+..++..++..++.++.|||+.. |.---|....++||++.+.+| +|--++...
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe 343 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE 343 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeec
Confidence 99999999999999987644 688899999999999999999985 444468888999999876554 343332210
Q ss_pred CCccccccCCCCCCCCccceecCCcCCChhhhcCCCC---CCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHh--c
Q 011287 196 QDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPA---TFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIA--R 270 (489)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~---~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~--~ 270 (489)
. ...-.+.|||||.|...+. -.++|+|||.++++||.|...||...++.+.--+|-- .
T Consensus 344 -------------~----gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialegl 406 (448)
T KOG0195|consen 344 -------------V----GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGL 406 (448)
T ss_pred -------------c----ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccc
Confidence 0 1234688999999987764 3578999999999999999999999888876655543 3
Q ss_pred CCCCCCCCCHHHHHHHHHhhccCCCCCCCCC
Q 011287 271 DIRFPNYFSDAARDLIDRLLDVDPSGRPGAG 301 (489)
Q Consensus 271 ~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~ 301 (489)
...+|++++.....|+.-|.+.||.+||...
T Consensus 407 rv~ippgis~hm~klm~icmnedpgkrpkfd 437 (448)
T KOG0195|consen 407 RVHIPPGISRHMNKLMNICMNEDPGKRPKFD 437 (448)
T ss_pred cccCCCCccHHHHHHHHHHhcCCCCcCCCcc
Confidence 5678999999999999999999999999763
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.77 E-value=1.3e-18 Score=162.97 Aligned_cols=141 Identities=23% Similarity=0.218 Sum_probs=110.1
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccch-------------------hHHHHHHHHHHHHHhCCCCC-
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE-------------------NKTAYVKLERIVLDQLDHPG- 106 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~-------------------~~~~~~~~E~~il~~l~hpn- 106 (489)
|.+.+.||+|+||.||+|... +|+.||||++........ ........|..++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 788899999999999999874 799999999765321000 01123566888888887773
Q ss_pred -ccEEEEEEEcCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEE
Q 011287 107 -VVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIK 185 (489)
Q Consensus 107 -Iv~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ik 185 (489)
+..++. ....++||||++|++|...... .....++.+++.++.++|+.||+||||||+||++++++.++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~ 165 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY 165 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence 444443 2346899999999988664321 45667889999999999999999999999999999999999
Q ss_pred EeeccCccccCCc
Q 011287 186 IADFGSVKPMQDS 198 (489)
Q Consensus 186 L~DFG~a~~~~~~ 198 (489)
|+|||.+......
T Consensus 166 liDfg~~~~~~~~ 178 (198)
T cd05144 166 IIDWPQMVSTDHP 178 (198)
T ss_pred EEECCccccCCCc
Confidence 9999999765443
No 432
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.77 E-value=2.1e-18 Score=161.37 Aligned_cols=133 Identities=20% Similarity=0.213 Sum_probs=107.2
Q ss_pred EEeeeCceEEEEEEEcCCCcEEEEEEeecccccc-----hhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEec
Q 011287 52 IYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITK-----ENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALES 126 (489)
Q Consensus 52 ~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~-----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~ 126 (489)
.||+|+||.||+|.. +|..+++|+........ ......+.+|..+++.+.|+++.....++.+....++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 489999999999984 67899999865432111 12235567899999999888765444444556667999999
Q ss_pred cCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 127 ~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
++|++|.+.+..... .++.+++.+|.+||+.|++|||++|.||+++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999988765321 7899999999999999999999999999999 88999999999874
No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.76 E-value=2.8e-18 Score=158.81 Aligned_cols=141 Identities=20% Similarity=0.270 Sum_probs=102.0
Q ss_pred EeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHH---------------------HHHHHHHHHhCCCCC-
Q 011287 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY---------------------VKLERIVLDQLDHPG- 106 (489)
Q Consensus 49 ~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~---------------------~~~E~~il~~l~hpn- 106 (489)
+++.||+|+||+||+|.+. +|+.||||++............. ...|...+..+.+.+
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3578999999999999986 89999999987543222221111 134566666664432
Q ss_pred -ccEEEEEEEcCCEEEEEEeccCCCChHH-HHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCC
Q 011287 107 -VVRLFFTFQDTFSLYMALESCEGGELFD-QITSKGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGH 183 (489)
Q Consensus 107 -Iv~l~~~~~~~~~lylV~E~~~gg~L~~-~l~~~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~ 183 (489)
+.+++.. ...++||||++++.+.. .+... ... ..++.++.+++.++.++|. .||+||||||+||+++ ++.
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~ 152 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-RLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGK 152 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhh-hhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCc
Confidence 4445543 23589999999954432 11111 111 6788999999999999999 9999999999999999 899
Q ss_pred EEEeeccCccccCC
Q 011287 184 IKIADFGSVKPMQD 197 (489)
Q Consensus 184 ikL~DFG~a~~~~~ 197 (489)
++|+|||.+.....
T Consensus 153 ~~liDfg~a~~~~~ 166 (187)
T cd05119 153 VYIIDVPQAVEIDH 166 (187)
T ss_pred EEEEECcccccccC
Confidence 99999999975543
No 434
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.75 E-value=1e-17 Score=180.29 Aligned_cols=139 Identities=19% Similarity=0.238 Sum_probs=112.6
Q ss_pred CCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeeccccc-----chhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCE
Q 011287 45 QDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT-----KENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 45 ~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~-----~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 119 (489)
..|...+.||+|+||+||++... +..+++|+....... .......+.+|..+++.++|++++..+.+..+...
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 34567899999999999999874 344555543222111 11223557789999999999999988777777777
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
.++||||++|++|.+++. ....++.+++.+|.+||+.|++||||||+|||+ .++.++|+|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 899999999999998875 356789999999999999999999999999999 678999999999874
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.70 E-value=2.2e-16 Score=152.22 Aligned_cols=138 Identities=20% Similarity=0.251 Sum_probs=105.5
Q ss_pred eeEEe-eeCceEEEEEEEcCCCcEEEEEEeecccc-----c-----chhHHHHHHHHHHHHHhCCCCCc--cEEEEEEEc
Q 011287 50 GKIYG-VGSYSKVVRAKKIDTGTVYALKIMDKKFI-----T-----KENKTAYVKLERIVLDQLDHPGV--VRLFFTFQD 116 (489)
Q Consensus 50 ~~~LG-~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~-----~-----~~~~~~~~~~E~~il~~l~hpnI--v~l~~~~~~ 116 (489)
...|| .|+.|+||.+.. .+..+++|.+....+ . .......+.+|..++..|.|++| +..+.+...
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 34677 788888888876 378999998865321 1 11233557789999999988775 566665433
Q ss_pred C-CE---EEEEEeccCC-CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccC
Q 011287 117 T-FS---LYMALESCEG-GELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGS 191 (489)
Q Consensus 117 ~-~~---lylV~E~~~g-g~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~ 191 (489)
. .. .++|||+++| .+|.+++.. +.+++.. +.+|+.+|.+||++||+||||||+|||++.++.++|+|||.
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCC
Confidence 2 22 3599999997 688888765 4566654 56899999999999999999999999999999999999998
Q ss_pred ccc
Q 011287 192 VKP 194 (489)
Q Consensus 192 a~~ 194 (489)
+..
T Consensus 189 ~~~ 191 (239)
T PRK01723 189 GEL 191 (239)
T ss_pred ccc
Confidence 864
No 436
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.67 E-value=1.2e-16 Score=133.40 Aligned_cols=89 Identities=18% Similarity=0.330 Sum_probs=72.1
Q ss_pred EEEeeehhhhh-h--ccceeEEEecCCeEEEECCCCCeeeeeeeccCCCCceEEE-------E-cCCCcEEEEcCCceEE
Q 011287 400 MISMVKKLQKL-T--SKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQ-------V-SSPSHFKIVTPKKVLS 468 (489)
Q Consensus 400 ~~g~~~k~~g~-~--~k~r~~~lt~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~-------~-~~~~~f~i~~p~r~y~ 468 (489)
|+|||.|++|. . ||||||+|++.-..||.++.....+|+|+|+.......|. . +....|.|+||+|||+
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~Rty~ 80 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPLDAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPERKFL 80 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCCCcCcCcEEEeeccccceeEeccCCccccccccceEEEEeCCeEEE
Confidence 58999999975 3 9999999998877789898888999999998653212231 1 2224899999999999
Q ss_pred EE-cCCccHHHHHHHHHHhcC
Q 011287 469 FE-DAKQRASQWKKAIEALQN 488 (489)
Q Consensus 469 ~~-d~~~~~~~W~~~i~~~~~ 488 (489)
|. +.+.++++|+++|+.|++
T Consensus 81 l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 81 FACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred EECCCHHHHHHHHHHHHHHhc
Confidence 99 566999999999999874
No 437
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.66 E-value=5.2e-16 Score=136.89 Aligned_cols=132 Identities=23% Similarity=0.232 Sum_probs=112.3
Q ss_pred EeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCC--CCccEEEEEEEcCCEEEEEEec
Q 011287 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH--PGVVRLFFTFQDTFSLYMALES 126 (489)
Q Consensus 49 ~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~~~lylV~E~ 126 (489)
+++.||.|.++.||++.... ..+++|.+..... ...+..|..+++.+.| .++.+++.++...+..|++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 46789999999999999843 7899999865422 3457779999999976 5899999998888889999999
Q ss_pred cCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM---GLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 127 ~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~---gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
+.|+.+..+ +......++.+++.+|..||.. +++|+|++|+||++++++.++++|||.+..
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 998877543 5567778899999999999985 799999999999999989999999999864
No 438
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.64 E-value=1.5e-15 Score=157.36 Aligned_cols=196 Identities=21% Similarity=0.343 Sum_probs=153.4
Q ss_pred HHhCCCCCccEEEEEEEcCCEEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCc-EeeccCCCCe
Q 011287 99 LDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVDALEYIHSMGL-IHRDIKPENL 176 (489)
Q Consensus 99 l~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~aL~~LH~~gI-iHrDLKpeNI 176 (489)
|+.+.|.|+.++++...+....+.|.+||..|+|.+.+... -.++..-...++.+|+.||+|||.-.| .|+.+++.|.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 35678999999999999999999999999999999999873 357777778889999999999998765 9999999999
Q ss_pred eeCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCC-------CCCCCcchhhhHHHHHHh
Q 011287 177 LLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSP-------ATFGNDLWALGCTLYQML 249 (489)
Q Consensus 177 Ll~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~-------~~~~sDiwSLG~ilyell 249 (489)
+++....+||+|||+........ .........-...|.|||.+.... .+.+.|+||+|+|+||++
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~~~--------~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEETA--------EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred eeeeeEEEEechhhhcccccccc--------cccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 99999999999999987654300 000111112345689999997642 366789999999999999
Q ss_pred hCCCCCCCC----CHHHHHHHHHh-cCCCC-CC-----CCCHHHHHHHHHhhccCCCCCCCCCC
Q 011287 250 SGTSPFKDT----SEWLIFQRIIA-RDIRF-PN-----YFSDAARDLIDRLLDVDPSGRPGAGP 302 (489)
Q Consensus 250 tG~~PF~~~----~~~~~~~~i~~-~~~~~-p~-----~~~~~~~~Li~~~L~~dP~~R~t~~~ 302 (489)
+..-||... ...++..++.. ....+ |. .+++++..+++.|+..+|.+||++.+
T Consensus 153 ~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~ 216 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQ 216 (484)
T ss_pred hccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHH
Confidence 999999763 22345555555 22212 21 34568999999999999999999854
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.62 E-value=4e-16 Score=161.69 Aligned_cols=263 Identities=23% Similarity=0.303 Sum_probs=203.5
Q ss_pred CCCCCeEEeeEEee--eCceEEEEEEE--cCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEc
Q 011287 42 FSIQDFELGKIYGV--GSYSKVVRAKK--IDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQD 116 (489)
Q Consensus 42 ~~~~dy~~~~~LG~--G~~g~Vy~a~~--~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~ 116 (489)
+.-+.|.+.+.+|. |.+|.||.++. ..++..+|+|.-+...- .......-.+|....+.+ .|++.++.+..+..
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s-~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS-PPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCC-CccccccccchhhcccccCccccccccCccccc
Confidence 33456889999999 99999999998 88999999997543322 112222233466555666 49999999999999
Q ss_pred CCEEEEEEeccCCCChHHHHHhCCC-CCHHHHHHHHHHHHH----HHHHHHhCCcEeeccCCCCeeeCCC-CCEEEeecc
Q 011287 117 TFSLYMALESCEGGELFDQITSKGH-LSEDEARFYTAEVVD----ALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFG 190 (489)
Q Consensus 117 ~~~lylV~E~~~gg~L~~~l~~~~~-l~e~~~~~i~~qil~----aL~~LH~~gIiHrDLKpeNILl~~~-g~ikL~DFG 190 (489)
.+.+|+-+|+|. .+|..+...... +++..++.++.+... ||.++|+.+++|-|+||.||++..+ ...+++|||
T Consensus 190 ~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 190 SGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred CCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcc
Confidence 999999999996 588888876654 899999999999999 9999999999999999999999999 899999999
Q ss_pred CccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCC--CHHHHHHHHH
Q 011287 191 SVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDT--SEWLIFQRII 268 (489)
Q Consensus 191 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~--~~~~~~~~i~ 268 (489)
+...+......... .......|...|++||.+.+ -++.+.|++|||-++.+..+|..++... +.+..+..+.
T Consensus 269 ~v~~i~~~~~~~~~-----~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 269 LVSKISDGNFSSVF-----KVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred eeEEccCCccccce-----eeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 99887665422111 11112257788999999865 4677899999999999999988777654 3333333322
Q ss_pred hcCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 269 ARDIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 269 ~~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
...+|....+.++..++..|++.+|..|+++ +.+++|++.....
T Consensus 343 -ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~-----q~~~~l~~i~s~~ 386 (524)
T KOG0601|consen 343 -IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTA-----QILTALNVIHSKL 386 (524)
T ss_pred -CchhhhcCcchhhhhHHHHhcCcchhhhhHH-----HHHhccccccchh
Confidence 3344555667788889999999999999998 8899999987544
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.61 E-value=1.1e-16 Score=169.62 Aligned_cols=188 Identities=20% Similarity=0.289 Sum_probs=121.1
Q ss_pred cccccch-----hhHhhhhcCCCCCCCCCcccCCccccccCCCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEE
Q 011287 2 LAMEKDF-----DSKLRIEGNNNSSTNCPTVQRSKSFAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALK 76 (489)
Q Consensus 2 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK 76 (489)
||.+.|+ .+.|+.-....++-+...+...-...++.|.+.. ..+|+. +.||.|++|+||.|+.+++|+.||||
T Consensus 73 LStR~DllP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~-F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVK 150 (537)
T PRK04750 73 LSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEW-FDDFDI-KPLASASIAQVHFARLKDNGREVVVK 150 (537)
T ss_pred HHcCcccCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHH-HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEE
Confidence 4555543 5666666665555544444433333444444332 567887 89999999999999999889999999
Q ss_pred Eeecccccc-------------------------------hhHHHHHHHHHH------HHHhC----CCCCccEEEEEEE
Q 011287 77 IMDKKFITK-------------------------------ENKTAYVKLERI------VLDQL----DHPGVVRLFFTFQ 115 (489)
Q Consensus 77 ~~~k~~~~~-------------------------------~~~~~~~~~E~~------il~~l----~hpnIv~l~~~~~ 115 (489)
+........ .+....+.+|.+ .+.++ .+...+.+-.+|.
T Consensus 151 V~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~ 230 (537)
T PRK04750 151 VLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYW 230 (537)
T ss_pred EeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeec
Confidence 997541000 011222333333 33333 2333344444443
Q ss_pred c-CCEEEEEEeccCCCChHHH--HHhCC----CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC----CE
Q 011287 116 D-TFSLYMALESCEGGELFDQ--ITSKG----HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG----HI 184 (489)
Q Consensus 116 ~-~~~lylV~E~~~gg~L~~~--l~~~~----~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g----~i 184 (489)
+ ....++||||+.|+.+.+. +...+ .+.+..+..++.|++ ..|++|+|+||.||+++.+| .+
T Consensus 231 d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i 303 (537)
T PRK04750 231 DYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRY 303 (537)
T ss_pred ccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeE
Confidence 3 4557899999999999764 33433 244555555555554 58999999999999999988 99
Q ss_pred EEeeccCccccCCc
Q 011287 185 KIADFGSVKPMQDS 198 (489)
Q Consensus 185 kL~DFG~a~~~~~~ 198 (489)
+++|||++..+...
T Consensus 304 ~llDFGivg~l~~~ 317 (537)
T PRK04750 304 IALDFGIVGSLNKE 317 (537)
T ss_pred EEEecceEEECCHH
Confidence 99999999877543
No 441
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.61 E-value=9.6e-16 Score=125.72 Aligned_cols=88 Identities=17% Similarity=0.189 Sum_probs=69.2
Q ss_pred EEEeeehhhh---hh--ccceeEEEecCCeEEEECCCCCee-eeeeeccCCCCceEEEEcC-----CCcEEEEcCCceEE
Q 011287 400 MISMVKKLQK---LT--SKKVQLILTNKPKLIYVDPSKLVV-KGNIIWSDNSNDLSIQVSS-----PSHFKIVTPKKVLS 468 (489)
Q Consensus 400 ~~g~~~k~~g---~~--~k~r~~~lt~~p~l~y~d~~~~~~-kg~i~~~~~~~~~~~~~~~-----~~~f~i~~p~r~y~ 468 (489)
.+|+++|++| ++ ||+|||+|+++-..||.+...... .|.|+|+.+.++..++... .+.|.|.||+|||+
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~rt~~ 81 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKTYI 81 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCccCCCCceEEcccceEEeeccccccccccCcEEEEEcCCceEE
Confidence 4799999999 55 999999999887778888754444 4999999983222222111 37999999999999
Q ss_pred EE-cCCccHHHHHHHHHHhc
Q 011287 469 FE-DAKQRASQWKKAIEALQ 487 (489)
Q Consensus 469 ~~-d~~~~~~~W~~~i~~~~ 487 (489)
|. |.+.++++|+++|+.++
T Consensus 82 l~A~se~e~e~WI~~i~~a~ 101 (101)
T cd01264 82 LKAKDEKNAEEWLQCLNIAV 101 (101)
T ss_pred EEeCCHHHHHHHHHHHHhhC
Confidence 99 67799999999998763
No 442
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.57 E-value=5.1e-15 Score=122.93 Aligned_cols=86 Identities=16% Similarity=0.219 Sum_probs=73.1
Q ss_pred EEEEEeeehhhhhh--ccceeEEEecCCeEEEECCCCCeeeeeeeccCCCCceEEEE--------cCCCcEEEEcCCceE
Q 011287 398 VLMISMVKKLQKLT--SKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQV--------SSPSHFKIVTPKKVL 467 (489)
Q Consensus 398 i~~~g~~~k~~g~~--~k~r~~~lt~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~~--------~~~~~f~i~~p~r~y 467 (489)
|+|+|+|.|++|.+ ||||||+|.+.-..||.+......+|.|+|+.+ .++. ++++.|.|.||+|||
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~I~L~~~----~v~~~~~~~~~~~~~~~F~I~t~~rt~ 77 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDKDPVERGVINLSTA----RVEHSEDQAAMVKGPNTFAVCTKHRGY 77 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCCCccEeeEEEeccc----EEEEccchhhhcCCCcEEEEECCCCEE
Confidence 68999999999866 999999999987778888887899999999954 3322 246799999999999
Q ss_pred EEE-cCCccHHHHHHHHHHhc
Q 011287 468 SFE-DAKQRASQWKKAIEALQ 487 (489)
Q Consensus 468 ~~~-d~~~~~~~W~~~i~~~~ 487 (489)
+|. +++.++++|+++|+..+
T Consensus 78 ~~~A~s~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 78 LFQALSDKEMIDWLYALNPLY 98 (100)
T ss_pred EEEcCCHHHHHHHHHHhhhhh
Confidence 998 56689999999998765
No 443
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.55 E-value=7.4e-14 Score=146.26 Aligned_cols=229 Identities=17% Similarity=0.283 Sum_probs=156.7
Q ss_pred eeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEeccCCCChH
Q 011287 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELF 133 (489)
Q Consensus 54 G~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E~~~gg~L~ 133 (489)
+-++.+..-.|..+.++.+|.|.+++... ......+.+-..-|+.++||||+++++.+..+..+|+|+|.+. .|.
T Consensus 21 ~~~~~a~~~~~t~k~~~~~vsVF~~~~~~---~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~ 95 (690)
T KOG1243|consen 21 AFSSEALWPDGTRKADGGPVSVFVYKRSN---GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLE 95 (690)
T ss_pred cCCCcccccccceeccCCceEEEEEeCCC---chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHH
Confidence 33444433356777889999999987652 2445667778888999999999999999999999999999995 577
Q ss_pred HHHHhCCCCCHHHHHHHHHHHHHHHHHHH-hCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCc
Q 011287 134 DQITSKGHLSEDEARFYTAEVVDALEYIH-SMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKA 212 (489)
Q Consensus 134 ~~l~~~~~l~e~~~~~i~~qil~aL~~LH-~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~ 212 (489)
.++++.+ ...+..-+.||+.||.||| +.+++|++|.-..|+|+..|+.||++|.++........ ..
T Consensus 96 ~~lk~l~---~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~----------~~ 162 (690)
T KOG1243|consen 96 TVLKELG---KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA----------PA 162 (690)
T ss_pred HHHHHhH---HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc----------cc
Confidence 7777644 7788888999999999997 67899999999999999999999999998864432210 11
Q ss_pred cceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhhcc
Q 011287 213 CTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRLLDV 292 (489)
Q Consensus 213 ~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L~~ 292 (489)
....---.|..|+.+.... -..|.|-|||++++++.| ++....+ ...+..++.....+-.+.+.-
T Consensus 163 ~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng--~~~~~~~-----------~~~~~~ipk~~~~~~~k~~~~ 227 (690)
T KOG1243|consen 163 KSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG--SLLTKTD-----------LSNTGKIPKALIELYCKKLGA 227 (690)
T ss_pred ccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc--ccCcchh-----------hhccCccchhHHHHHHHHhcc
Confidence 1112222466666554433 346999999999999999 3322221 122333444444444444445
Q ss_pred CCCCCCCCCCCCHHHHh-cCCCCCC
Q 011287 293 DPSGRPGAGPGGYAVLK-MHPFFKG 316 (489)
Q Consensus 293 dP~~R~t~~~~~~~~l~-~hpff~~ 316 (489)
.+..||..-. -+.+.+ -|.||++
T Consensus 228 ~~~~r~n~~~-~~~~~~~~~gff~n 251 (690)
T KOG1243|consen 228 TELKRPNKLR-FILECRLLGGFFRN 251 (690)
T ss_pred ccccccchhh-HHHHHHhccccccc
Confidence 5556655221 122222 2666654
No 444
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.52 E-value=2.1e-14 Score=117.95 Aligned_cols=85 Identities=14% Similarity=0.294 Sum_probs=67.0
Q ss_pred EEeeehhhh--hh--ccceeEEEecC-CeE-EEECCCCCeeeeeeeccCCCCceEEEEc-CCCcEEEEcCCceEEEE-cC
Q 011287 401 ISMVKKLQK--LT--SKKVQLILTNK-PKL-IYVDPSKLVVKGNIIWSDNSNDLSIQVS-SPSHFKIVTPKKVLSFE-DA 472 (489)
Q Consensus 401 ~g~~~k~~g--~~--~k~r~~~lt~~-p~l-~y~d~~~~~~kg~i~~~~~~~~~~~~~~-~~~~f~i~~p~r~y~~~-d~ 472 (489)
+|+|.|++| .+ ||+|||||++. +.| ||.++.....+|.|+|..+. +..... .+..|.|.||+|||+|. ++
T Consensus 2 ~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d~~p~G~I~L~~~~--~~~~~~~~~~~F~i~t~~r~y~l~A~s 79 (95)
T cd01265 2 CGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQDAKPLGRVDLSGAA--FTYDPREEKGRFEIHSNNEVIALKASS 79 (95)
T ss_pred cccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCcccccceEECCccE--EEcCCCCCCCEEEEEcCCcEEEEECCC
Confidence 599999876 33 99999999974 455 67777788999999999852 221222 25799999999999999 55
Q ss_pred CccHHHHHHHHHHhc
Q 011287 473 KQRASQWKKAIEALQ 487 (489)
Q Consensus 473 ~~~~~~W~~~i~~~~ 487 (489)
+.++++|+++|+..+
T Consensus 80 ~~e~~~Wi~al~~~~ 94 (95)
T cd01265 80 DKQMNYWLQALQSKR 94 (95)
T ss_pred HHHHHHHHHHHHhhc
Confidence 689999999999753
No 445
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.52 E-value=8.2e-14 Score=145.76 Aligned_cols=142 Identities=23% Similarity=0.332 Sum_probs=97.6
Q ss_pred eeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchh--------------------------------HHH------H
Q 011287 50 GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKEN--------------------------------KTA------Y 91 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~--------------------------------~~~------~ 91 (489)
.+.||.|++|+||+|+.+ +|+.||||+..... ...- ... .
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i-~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld 199 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGI-EKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELD 199 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCc-HHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHC
Confidence 367999999999999975 69999999985431 1000 000 1
Q ss_pred HHHHHHHHHhC----C-CCCccEEEEEE-EcCCEEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHH-HHHHHHh
Q 011287 92 VKLERIVLDQL----D-HPGVVRLFFTF-QDTFSLYMALESCEGGELFDQITSK-GHLSEDEARFYTAEVVD-ALEYIHS 163 (489)
Q Consensus 92 ~~~E~~il~~l----~-hpnIv~l~~~~-~~~~~lylV~E~~~gg~L~~~l~~~-~~l~e~~~~~i~~qil~-aL~~LH~ 163 (489)
+.+|...+.++ . +++| .+-.++ ......++||||++|++|.+..... ... ....++.+++. .+..+|.
T Consensus 200 f~~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 200 LRREAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHh
Confidence 23355444444 2 3433 322222 2234578999999999998876432 112 23345556655 4678999
Q ss_pred CCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 164 MGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 164 ~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
.|++|+|+||.||+++.+|.++|+|||++..+..
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 9999999999999999999999999999987754
No 446
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.50 E-value=4.7e-14 Score=118.32 Aligned_cols=85 Identities=19% Similarity=0.217 Sum_probs=66.6
Q ss_pred EEEEeeehhh-hh------hccceeEEEecCCeEEEECCCC--CeeeeeeeccCCCCceEEEE-----------cCCCcE
Q 011287 399 LMISMVKKLQ-KL------TSKKVQLILTNKPKLIYVDPSK--LVVKGNIIWSDNSNDLSIQV-----------SSPSHF 458 (489)
Q Consensus 399 ~~~g~~~k~~-g~------~~k~r~~~lt~~p~l~y~d~~~--~~~kg~i~~~~~~~~~~~~~-----------~~~~~f 458 (489)
|++|++.|++ |. .||+|||+|++.-..||.++.. ...+|.|+|+.+ ..++. .....|
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~~~~~kG~I~L~~~---~~ve~~~~~~~~~~~~~~~~~F 77 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEKRGSKKGSIDLSKI---KCVETVKPEKNPPIPERFKYPF 77 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCcccccCcceeEECCcc---eEEEEecCCcCcccccccCccE
Confidence 5788998885 22 4999999998776667777653 479999999986 33332 124579
Q ss_pred EEEcCCceEEEE-cCCccHHHHHHHHHHh
Q 011287 459 KIVTPKKVLSFE-DAKQRASQWKKAIEAL 486 (489)
Q Consensus 459 ~i~~p~r~y~~~-d~~~~~~~W~~~i~~~ 486 (489)
.|+|++|||||. +.+.++++|+++|+.|
T Consensus 78 ~i~t~~r~~yl~A~s~~er~~WI~ai~~~ 106 (106)
T cd01238 78 QVVHDEGTLYVFAPTEELRKRWIKALKQV 106 (106)
T ss_pred EEEeCCCeEEEEcCCHHHHHHHHHHHHhC
Confidence 999999999998 5558999999999975
No 447
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.49 E-value=9.1e-14 Score=114.72 Aligned_cols=87 Identities=16% Similarity=0.175 Sum_probs=69.9
Q ss_pred EEEEEeeehhhhhhccceeEEEecCC-----eEEEECCCC------CeeeeeeeccCCCCceEE-EEcCCCcEEEEcCCc
Q 011287 398 VLMISMVKKLQKLTSKKVQLILTNKP-----KLIYVDPSK------LVVKGNIIWSDNSNDLSI-QVSSPSHFKIVTPKK 465 (489)
Q Consensus 398 i~~~g~~~k~~g~~~k~r~~~lt~~p-----~l~y~d~~~------~~~kg~i~~~~~~~~~~~-~~~~~~~f~i~~p~r 465 (489)
|+++|||.|+ -.||||||||+..+ +|.|.+... ...+|.|+|+.+.++... +.+....|.|.||.|
T Consensus 2 v~k~GyL~K~--K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~t~dr 79 (101)
T cd01257 2 VRKSGYLRKQ--KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADAKHRHLIALYTRDE 79 (101)
T ss_pred ccEEEEEeEe--cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccccccCeEEEEEeCCc
Confidence 7899999998 57999999999863 786666643 578999999998332221 234457999999999
Q ss_pred eEEEE-cCCccHHHHHHHHHHh
Q 011287 466 VLSFE-DAKQRASQWKKAIEAL 486 (489)
Q Consensus 466 ~y~~~-d~~~~~~~W~~~i~~~ 486 (489)
+|+|. |.+.++++|+++|+++
T Consensus 80 ~f~l~aese~E~~~Wi~~i~~~ 101 (101)
T cd01257 80 YFAVAAENEAEQDSWYQALLEL 101 (101)
T ss_pred eEEEEeCCHHHHHHHHHHHhhC
Confidence 99999 6679999999999874
No 448
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.49 E-value=7.2e-14 Score=113.65 Aligned_cols=83 Identities=12% Similarity=0.183 Sum_probs=67.9
Q ss_pred EEeeehhhhhh--ccceeEEEecCCeEEEECCCCC--eeeeeeeccCCCCceEEEEcCCCcEEEEcCC-ceEEEE-cCCc
Q 011287 401 ISMVKKLQKLT--SKKVQLILTNKPKLIYVDPSKL--VVKGNIIWSDNSNDLSIQVSSPSHFKIVTPK-KVLSFE-DAKQ 474 (489)
Q Consensus 401 ~g~~~k~~g~~--~k~r~~~lt~~p~l~y~d~~~~--~~kg~i~~~~~~~~~~~~~~~~~~f~i~~p~-r~y~~~-d~~~ 474 (489)
.|||.|.++++ ||+|||||.++-..||.++... ..+|.|+|+.+ .+.+....+..|.|.++. |||+|. +.+.
T Consensus 2 ~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~~~~~~G~I~L~~~--~i~~~~~~~~~F~i~~~~~r~~~L~A~s~~ 79 (91)
T cd01247 2 NGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEKSHGCRGSIFLKKA--IIAAHEFDENRFDISVNENVVWYLRAENSQ 79 (91)
T ss_pred ceEEEEeccccCCCceEEEEEECCEEEEEecCccCcCCCcEEEECccc--EEEcCCCCCCEEEEEeCCCeEEEEEeCCHH
Confidence 69999999988 9999999998888899997653 36899999986 233333446789997655 999999 5668
Q ss_pred cHHHHHHHHHH
Q 011287 475 RASQWKKAIEA 485 (489)
Q Consensus 475 ~~~~W~~~i~~ 485 (489)
++++|+++|+.
T Consensus 80 e~~~Wi~al~~ 90 (91)
T cd01247 80 SRLLWMDSVVR 90 (91)
T ss_pred HHHHHHHHHhh
Confidence 99999999985
No 449
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.48 E-value=5.4e-13 Score=123.83 Aligned_cols=142 Identities=15% Similarity=0.179 Sum_probs=104.0
Q ss_pred eeEEeeeCceEEEEEEEcC------CCcEEEEEEeeccccc-------------------chhHHHHHH----HHHHHHH
Q 011287 50 GKIYGVGSYSKVVRAKKID------TGTVYALKIMDKKFIT-------------------KENKTAYVK----LERIVLD 100 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~~------tg~~vAiK~~~k~~~~-------------------~~~~~~~~~----~E~~il~ 100 (489)
...||.|--+.||.|.... .+..+|||++...... +......+. .|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999998653 3589999998532110 112233333 7999998
Q ss_pred hCCC--CCccEEEEEEEcCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HhCCcEeeccCCCCee
Q 011287 101 QLDH--PGVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYI-HSMGLIHRDIKPENLL 177 (489)
Q Consensus 101 ~l~h--pnIv~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~L-H~~gIiHrDLKpeNIL 177 (489)
++.. -++.+++.+ ..-++||||+.+..+..-..+...+++..+..+..+++.+|..| |..||+|+||++.|||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL 157 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML 157 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 8843 345566654 35679999997754433222334566777788889999999998 8999999999999999
Q ss_pred eCCCCCEEEeeccCccccC
Q 011287 178 LTADGHIKIADFGSVKPMQ 196 (489)
Q Consensus 178 l~~~g~ikL~DFG~a~~~~ 196 (489)
++ ++.+.|+|||.+....
T Consensus 158 ~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 158 WH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EE-CCcEEEEECCCceeCC
Confidence 96 5789999999987554
No 450
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.47 E-value=7.6e-14 Score=115.61 Aligned_cols=86 Identities=16% Similarity=0.210 Sum_probs=65.1
Q ss_pred EEEeeehhhh-----------hhccceeEEEecCCeEEEE-CC-CCCeeeeeeeccCCCCceEEEE--cCCCcEEEEcCC
Q 011287 400 MISMVKKLQK-----------LTSKKVQLILTNKPKLIYV-DP-SKLVVKGNIIWSDNSNDLSIQV--SSPSHFKIVTPK 464 (489)
Q Consensus 400 ~~g~~~k~~g-----------~~~k~r~~~lt~~p~l~y~-d~-~~~~~kg~i~~~~~~~~~~~~~--~~~~~f~i~~p~ 464 (489)
++|||.|..+ ..||||||||++...|+|. |. .....+|+|+++.+..+...+. .+...|.|.||+
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~tp~ 80 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMPTTLPQGTIDMNQCTDVVDAEARTGQKFSICILTPD 80 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCCCcccceEEEccceEEEeecccccCCccEEEEECCC
Confidence 4678877654 1289999999998888774 43 3457899999998733222221 224689999999
Q ss_pred ceEEEE-cCCccHHHHHHHHHH
Q 011287 465 KVLSFE-DAKQRASQWKKAIEA 485 (489)
Q Consensus 465 r~y~~~-d~~~~~~~W~~~i~~ 485 (489)
|||+|. |.+.++++|+++|+.
T Consensus 81 R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 81 KEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred ceEEEEeCCHHHHHHHHHHHHh
Confidence 999999 667999999999986
No 451
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=3.4e-14 Score=147.40 Aligned_cols=251 Identities=25% Similarity=0.310 Sum_probs=192.3
Q ss_pred CCCCCeEEeeEEeeeCceEEEEEEEc-CCCcEEEEEEeecccccchhHHHHHHHHHHHHHhC-CCCCccEEEEEEEcCCE
Q 011287 42 FSIQDFELGKIYGVGSYSKVVRAKKI-DTGTVYALKIMDKKFITKENKTAYVKLERIVLDQL-DHPGVVRLFFTFQDTFS 119 (489)
Q Consensus 42 ~~~~dy~~~~~LG~G~~g~Vy~a~~~-~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~ 119 (489)
....+|..+..||.|.|+.|+.+..+ .++..|++|...+......... +-..|..+...+ .|.++++.+..+.....
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di-~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDI-FSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhh-cchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 34578999999999999999998876 7899999998876544433333 333466666666 48899999888888888
Q ss_pred EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCC-CCEEEeeccCccccCCc
Q 011287 120 LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTAD-GHIKIADFGSVKPMQDS 198 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~-g~ikL~DFG~a~~~~~~ 198 (489)
.|+-.|||+++++...+.-.-.+++...+.+..|++.++.++|+..++|+|+||+||++..+ +..++.|||++..+...
T Consensus 341 ~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~ 420 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS 420 (524)
T ss_pred ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccccee
Confidence 89999999999887665444458999999999999999999999999999999999999886 78899999998643221
Q ss_pred cccccCCCCCCCCccceecCCcCC--ChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCC
Q 011287 199 RITVLPNAASDDKACTFVGTAAYV--PPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN 276 (489)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~gt~~Y~--aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~ 276 (489)
...+..+..+. ++..+....+..++|++|||.-+++..+|.+.-...+. ...|..+......
T Consensus 421 -------------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~~~p~~~ 484 (524)
T KOG0601|consen 421 -------------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSGDTPNLP 484 (524)
T ss_pred -------------cccccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceeeecccccCCC
Confidence 11223334444 45555666788999999999999999998765444333 2344555555555
Q ss_pred CCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCC
Q 011287 277 YFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFF 314 (489)
Q Consensus 277 ~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff 314 (489)
....++..+.+.+..+|+..|+.+ .++..|.=|
T Consensus 485 ~~~~~~q~~~kv~~~~~~~~~~l~-----~~l~~~~~~ 517 (524)
T KOG0601|consen 485 GLKLQLQVLLKVMINPDRKRRPSA-----VELSLHSEF 517 (524)
T ss_pred chHHhhhhhhhhhcCCccccchhh-----hhhcccchh
Confidence 556899999999999999999988 556666544
No 452
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.44 E-value=3.2e-13 Score=112.34 Aligned_cols=84 Identities=24% Similarity=0.304 Sum_probs=66.7
Q ss_pred EEeeehhhhhh--ccceeEEEec-CCeE-EEECCCCCeeeeeeeccCCCCceEEEEc-----------CCCcEEEEcCCc
Q 011287 401 ISMVKKLQKLT--SKKVQLILTN-KPKL-IYVDPSKLVVKGNIIWSDNSNDLSIQVS-----------SPSHFKIVTPKK 465 (489)
Q Consensus 401 ~g~~~k~~g~~--~k~r~~~lt~-~p~l-~y~d~~~~~~kg~i~~~~~~~~~~~~~~-----------~~~~f~i~~p~r 465 (489)
+|+|.|+++.. ||+|||+|++ ...| ||.++.....+|.|+|+.. ..+... ....|.|.|++|
T Consensus 2 ~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~---~~v~~~~~~~~~~~~~~~~~~f~i~t~~r 78 (101)
T cd01235 2 EGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFEDTAEKGCIDLAEV---KSVNLAQPGMGAPKHTSRKGFFDLKTSKR 78 (101)
T ss_pred eEEEEEcCCCCCCccceEEEEECCCCEEEEecCCCCCccceEEEccee---EEEeecCCCCCCCCCCCCceEEEEEeCCc
Confidence 79999999876 9999999996 4455 6666777899999999986 334321 123577789999
Q ss_pred eEEEE-cCCccHHHHHHHHHHhc
Q 011287 466 VLSFE-DAKQRASQWKKAIEALQ 487 (489)
Q Consensus 466 ~y~~~-d~~~~~~~W~~~i~~~~ 487 (489)
+|+|. +.+.++++|+++|+.++
T Consensus 79 ~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 79 TYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred eEEEECCCHHHHHHHHHHHHhhC
Confidence 99997 66689999999999864
No 453
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.43 E-value=4.6e-13 Score=121.64 Aligned_cols=127 Identities=20% Similarity=0.206 Sum_probs=95.7
Q ss_pred eeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCcc-EEEEEEEcCCEEEEEEeccC
Q 011287 50 GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV-RLFFTFQDTFSLYMALESCE 128 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv-~l~~~~~~~~~lylV~E~~~ 128 (489)
++.|+.|.++.||+++.. +..|++|+...... .......|..+++.+.+.+++ +++.... ...++|||+++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 467899999999999874 78999998754321 112346688888888655544 4554433 23579999999
Q ss_pred CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCc-----EeeccCCCCeeeCCCCCEEEeeccCcc
Q 011287 129 GGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGL-----IHRDIKPENLLLTADGHIKIADFGSVK 193 (489)
Q Consensus 129 gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gI-----iHrDLKpeNILl~~~g~ikL~DFG~a~ 193 (489)
|.++... ......++.+++.+|..||..++ +|+|++|.||+++ ++.++++|||.+.
T Consensus 75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 9887543 11123457899999999999985 9999999999998 6789999999876
No 454
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.43 E-value=3.3e-13 Score=113.71 Aligned_cols=83 Identities=16% Similarity=0.125 Sum_probs=67.0
Q ss_pred EEeeehhhhh------hccceeEEEecCCe-------EEEECCCCCeeeeeeeccCCCCceEEEE-----cC-C---CcE
Q 011287 401 ISMVKKLQKL------TSKKVQLILTNKPK-------LIYVDPSKLVVKGNIIWSDNSNDLSIQV-----SS-P---SHF 458 (489)
Q Consensus 401 ~g~~~k~~g~------~~k~r~~~lt~~p~-------l~y~d~~~~~~kg~i~~~~~~~~~~~~~-----~~-~---~~f 458 (489)
+|||.|+++. .||+|||+|++.-. .||.|+...+.+|.|+|+.+ ..++. .. . ..|
T Consensus 2 eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~~k~~g~I~L~~~---~~v~~~~~~~~~~~~~~~~f 78 (108)
T cd01266 2 EGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRKFKLEFVIDLESC---SQVDPGLLCTAGNCIFGYGF 78 (108)
T ss_pred ceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCCCCccceEEECCcc---EEEcccccccccCcccceEE
Confidence 6999999872 49999999998764 68888888899999999985 33322 11 1 249
Q ss_pred EEEcCCceEEEE-cCCccHHHHHHHHHHh
Q 011287 459 KIVTPKKVLSFE-DAKQRASQWKKAIEAL 486 (489)
Q Consensus 459 ~i~~p~r~y~~~-d~~~~~~~W~~~i~~~ 486 (489)
.|.||+|||+|. +.+.++++|+++|.++
T Consensus 79 ~i~t~~r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 79 DIETIVRDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred EEEeCCccEEEEECCHHHHHHHHHHHHhh
Confidence 999999999998 6668999999999875
No 455
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.42 E-value=2.3e-13 Score=112.23 Aligned_cols=86 Identities=19% Similarity=0.204 Sum_probs=70.2
Q ss_pred EEEeeehhhh--h----hccceeEEEecCCeEEEECCCCCeeeeeeeccCCCCceEEEEcCCCcEEEEcCC-ceEEEE-c
Q 011287 400 MISMVKKLQK--L----TSKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQVSSPSHFKIVTPK-KVLSFE-D 471 (489)
Q Consensus 400 ~~g~~~k~~g--~----~~k~r~~~lt~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~~~~~~~f~i~~p~-r~y~~~-d 471 (489)
.+|||.|+++ - .||+|||+|++.-.+||.++.....+|.|+|+...+....+.++...|.|.+|+ |+|+|. |
T Consensus 2 ~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~~~~~f~a~ 81 (96)
T cd01260 2 CDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQDEKAEGLIFLSGFTIESAKEVKKKYAFKVCHPVYKSFYFAAE 81 (96)
T ss_pred ceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCCCccceEEEccCCEEEEchhcCCceEEEECCCCCcEEEEEeC
Confidence 4799998753 2 599999999998888999998889999999998622222234566799999998 999998 6
Q ss_pred CCccHHHHHHHHHH
Q 011287 472 AKQRASQWKKAIEA 485 (489)
Q Consensus 472 ~~~~~~~W~~~i~~ 485 (489)
.+.++++|+++|..
T Consensus 82 s~~e~~~Wi~ai~~ 95 (96)
T cd01260 82 TLDDLSQWVNHLIT 95 (96)
T ss_pred CHHHHHHHHHHHHh
Confidence 66899999999975
No 456
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.39 E-value=5.5e-13 Score=111.06 Aligned_cols=89 Identities=12% Similarity=0.121 Sum_probs=66.9
Q ss_pred EEEEEeeehhhhhh--ccceeEEEec-CCeEEEECCCCCeeeeeeeccCCCC----ceEEEEcCCCcEEEE------cCC
Q 011287 398 VLMISMVKKLQKLT--SKKVQLILTN-KPKLIYVDPSKLVVKGNIIWSDNSN----DLSIQVSSPSHFKIV------TPK 464 (489)
Q Consensus 398 i~~~g~~~k~~g~~--~k~r~~~lt~-~p~l~y~d~~~~~~kg~i~~~~~~~----~~~~~~~~~~~f~i~------~p~ 464 (489)
|+|+||+.|+++.+ ||+|||+|++ +-.+||.|......+|.||++.... ...++......|.|. ++.
T Consensus 1 v~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~~~~~ 80 (102)
T cd01241 1 VVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPEDGDPFLPPLNNFSVAECQLMKTERPRPNTFIIRCLQWTTVIE 80 (102)
T ss_pred CcEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCCccCccccccCCeEEeeeeeeeccCCCcceEEEEeccCCcccC
Confidence 57999999999977 9999999995 5556788865555568999887521 011122335689997 478
Q ss_pred ceEEEEcCCccHHHHHHHHHHhc
Q 011287 465 KVLSFEDAKQRASQWKKAIEALQ 487 (489)
Q Consensus 465 r~y~~~d~~~~~~~W~~~i~~~~ 487 (489)
|+|+ .|.+.++++|+++|+.|.
T Consensus 81 r~f~-a~s~ee~~eWi~ai~~v~ 102 (102)
T cd01241 81 RTFH-VESPEEREEWIHAIQTVA 102 (102)
T ss_pred EEEE-eCCHHHHHHHHHHHHhhC
Confidence 9987 477889999999999863
No 457
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=6.8e-14 Score=134.89 Aligned_cols=270 Identities=20% Similarity=0.261 Sum_probs=171.7
Q ss_pred ccccCCCCCCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEee----cccccchhHHHHHHHHHHHHHhCCCCCcc
Q 011287 33 FAFRAPQEHFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMD----KKFITKENKTAYVKLERIVLDQLDHPGVV 108 (489)
Q Consensus 33 ~~~~~~~~~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~----k~~~~~~~~~~~~~~E~~il~~l~hpnIv 108 (489)
+....|...+...+-+++..=|-| --.||++-+.+.|.+|..-.+. |.....+.+.+.+ ..-|-.+.|.|||
T Consensus 55 Ileesp~~rw~krreqv~qrdvPg-id~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~v---FdnllqlvHsnlv 130 (458)
T KOG1266|consen 55 ILEESPCGRWGKRREQVGQRDVPG-IDDVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAV---FDNLLQLVHSNLV 130 (458)
T ss_pred hhccCchhhhhhhhhhccCCCCCc-hHHHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHH---HHHHHHHHHHHHH
Confidence 333444444444444333322222 2247777777777776543322 1111122222222 2233445799999
Q ss_pred EEEEEEEcC-----CEEEEEEeccCCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCC--cEeeccCCCCee
Q 011287 109 RLFFTFQDT-----FSLYMALESCEGGELFDQITSK----GHLSEDEARFYTAEVVDALEYIHSMG--LIHRDIKPENLL 177 (489)
Q Consensus 109 ~l~~~~~~~-----~~lylV~E~~~gg~L~~~l~~~----~~l~e~~~~~i~~qil~aL~~LH~~g--IiHrDLKpeNIL 177 (489)
+.+.++.+. ..+.|+.||+..|+|..+|++. ..+....-++|+-||+.||.|||+.. |+|+++...-|+
T Consensus 131 kfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tif 210 (458)
T KOG1266|consen 131 KFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIF 210 (458)
T ss_pred HHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhhee
Confidence 999888654 4589999999999999999764 35889999999999999999999985 999999999999
Q ss_pred eCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCC-C
Q 011287 178 LTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPF-K 256 (489)
Q Consensus 178 l~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF-~ 256 (489)
+..+|-+|+.--.... .... ...........-.|-+.|.|||.=.....+.++|||++|....+|..|..-- .
T Consensus 211 iq~ngLIkig~~ap~s-~h~s-----~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tn 284 (458)
T KOG1266|consen 211 IQHNGLIKIGSVAPDS-THPS-----VNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTN 284 (458)
T ss_pred ecCCceEEecccCccc-cchh-----hhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCC
Confidence 9999888874221110 0000 0000011111224567899999766666778899999999999998886542 2
Q ss_pred CCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCCcc
Q 011287 257 DTSEWLIFQRIIARDIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGIDWK 320 (489)
Q Consensus 257 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~~~ 320 (489)
+.+....-..|.+.-+.+. ..--+++|.+||+..|+.||++ .+++-||..-++.-.
T Consensus 285 seS~~~~ee~ia~~i~~le---n~lqr~~i~kcl~~eP~~rp~a-----r~llfHpllfeVhsl 340 (458)
T KOG1266|consen 285 SESKVEVEENIANVIIGLE---NGLQRGSITKCLEGEPNGRPDA-----RLLLFHPLLFEVHSL 340 (458)
T ss_pred Ccceeehhhhhhhheeecc---CccccCcCcccccCCCCCCcch-----hhhhcCceeeecchH
Confidence 3322222222222211111 1224678999999999999999 789999987665543
No 458
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.36 E-value=1.4e-12 Score=107.06 Aligned_cols=87 Identities=17% Similarity=0.075 Sum_probs=64.4
Q ss_pred EEEEeeehhhhhhccceeEEEecCCeEEEECCCCCeeeeeeeccCCCCceEEEEc---CCCcEEEEcCCceEEEEc-CCc
Q 011287 399 LMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQVS---SPSHFKIVTPKKVLSFED-AKQ 474 (489)
Q Consensus 399 ~~~g~~~k~~g~~~k~r~~~lt~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~~~---~~~~f~i~~p~r~y~~~d-~~~ 474 (489)
++...-.++.+.-||+|||+||+.-..||.++. ...+|.|||+....+..+... ..+.|.|+||.|||||.. .+.
T Consensus 8 ~kr~~~~~~~~~n~KkRwF~Lt~~~L~Y~k~~~-~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~ 86 (98)
T cd01244 8 VDRSRLAWKKVLHFKKRYFQLTTTHLSWAKDVQ-CKKSALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPV 86 (98)
T ss_pred EEcccCCCccCcCCceeEEEECCCEEEEECCCC-CceeeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHH
Confidence 333333344445699999999977777777775 789999999986322222222 236899999999999995 458
Q ss_pred cHHHHHHHHHHh
Q 011287 475 RASQWKKAIEAL 486 (489)
Q Consensus 475 ~~~~W~~~i~~~ 486 (489)
++++|+++|+++
T Consensus 87 E~~~Wi~al~k~ 98 (98)
T cd01244 87 EATDWLNALEKQ 98 (98)
T ss_pred HHHHHHHHHhcC
Confidence 999999999874
No 459
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.33 E-value=9.2e-13 Score=138.64 Aligned_cols=166 Identities=23% Similarity=0.388 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHhC-CcEeeccCCCCeeeCCCCCEEEeeccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCC
Q 011287 152 AEVVDALEYIHSM-GLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSS 230 (489)
Q Consensus 152 ~qil~aL~~LH~~-gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~ 230 (489)
.+.+.|+.|+|.. ++||++|.|++|.++.+|.+||+.|+++........ .....+.........-...|.|||++.+.
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~-~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE-YPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc-cccccCCCCCChhhccCcccccchhhccc
Confidence 3444999999975 899999999999999999999999999876554322 11222333333344567789999999998
Q ss_pred CCCCCCcchhhhHHHHHHh-hCCCCCCCCCHHHHHHHHH----hcCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCH
Q 011287 231 PATFGNDLWALGCTLYQML-SGTSPFKDTSEWLIFQRII----ARDIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGY 305 (489)
Q Consensus 231 ~~~~~sDiwSLG~ilyell-tG~~PF~~~~~~~~~~~i~----~~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~ 305 (489)
..+.++|++||||++|.+. .|+.-|.+.+....+..-. .........+|+++++=+.++|..++.-||++
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~----- 259 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL----- 259 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcch-----
Confidence 8999999999999999999 6666666553322221111 12234557799999999999999999999977
Q ss_pred HHHhcCCCCCCCCccccc
Q 011287 306 AVLKMHPFFKGIDWKNIR 323 (489)
Q Consensus 306 ~~l~~hpff~~i~~~~~~ 323 (489)
..+...|||.+..-..|+
T Consensus 260 ~~l~~~~ff~D~~~~aLr 277 (700)
T KOG2137|consen 260 DLLLSIPFFSDPGLKALR 277 (700)
T ss_pred hhhhcccccCCchhhhhh
Confidence 778999999876655544
No 460
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.29 E-value=5.3e-12 Score=109.29 Aligned_cols=87 Identities=18% Similarity=0.215 Sum_probs=69.4
Q ss_pred EEEeeehhhhhh--ccceeEEEecCCeEEEECCCCCeeeeeeeccCCCCceEEE--EcCCCcEEEEcCC-----------
Q 011287 400 MISMVKKLQKLT--SKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQ--VSSPSHFKIVTPK----------- 464 (489)
Q Consensus 400 ~~g~~~k~~g~~--~k~r~~~lt~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~--~~~~~~f~i~~p~----------- 464 (489)
|+|||.|++|.+ ||+|||+|++.-..||.++.....+|.|+|+.. .+... ...+..|.|.+|+
T Consensus 2 k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~~~~~~g~I~L~~~--~v~~~~~~~~~~~F~i~~~~~~~~i~~~~~~ 79 (125)
T cd01252 2 REGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENV--SIREVEDPSKPFCFELFSPSDKQQIKACKTE 79 (125)
T ss_pred cEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCCCCCceEEEECCCc--EEEEcccCCCCeeEEEECCcccccccccccc
Confidence 679999999865 999999999987778888877889999999964 12222 1245679888765
Q ss_pred ----------ceEEEE-cCCccHHHHHHHHHHhcC
Q 011287 465 ----------KVLSFE-DAKQRASQWKKAIEALQN 488 (489)
Q Consensus 465 ----------r~y~~~-d~~~~~~~W~~~i~~~~~ 488 (489)
++|+|. +.+.++++|+++|+.++.
T Consensus 80 ~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~ 114 (125)
T cd01252 80 SDGRVVEGNHSVYRISAANDEEMDEWIKSIKASIS 114 (125)
T ss_pred ccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 689898 556899999999998763
No 461
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.26 E-value=1.1e-11 Score=101.51 Aligned_cols=85 Identities=21% Similarity=0.218 Sum_probs=66.8
Q ss_pred EEEeeehhhhh-h--ccceeEEEec---CCeE-EEECCCCCeeeeeeeccCCCCceEEEE---cCCCcEEEEcCCc--eE
Q 011287 400 MISMVKKLQKL-T--SKKVQLILTN---KPKL-IYVDPSKLVVKGNIIWSDNSNDLSIQV---SSPSHFKIVTPKK--VL 467 (489)
Q Consensus 400 ~~g~~~k~~g~-~--~k~r~~~lt~---~p~l-~y~d~~~~~~kg~i~~~~~~~~~~~~~---~~~~~f~i~~p~r--~y 467 (489)
+.|++.|++|. + ||+|||+|++ ..+| ||.++..++.+|.|+++.+ .+..+.. ..++.|.|.+|++ +|
T Consensus 1 ~~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p~gli~l~~~-~V~~v~ds~~~r~~cFel~~~~~~~~y 79 (98)
T cd01245 1 KKGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKPIGLIDLSDA-YLYPVHDSLFGRPNCFQIVERALPTVY 79 (98)
T ss_pred CCCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCccceeecccc-EEEEccccccCCCeEEEEecCCCCeEE
Confidence 35899999986 4 9999999985 4666 5555667899999999986 2222222 3358999999987 99
Q ss_pred EEEcCCccHHHHHHHHHH
Q 011287 468 SFEDAKQRASQWKKAIEA 485 (489)
Q Consensus 468 ~~~d~~~~~~~W~~~i~~ 485 (489)
++.+.+.++++|+++|.+
T Consensus 80 ~~~a~~~er~~Wi~~l~~ 97 (98)
T cd01245 80 YSCRSSEERDKWIESLQA 97 (98)
T ss_pred EEeCCHHHHHHHHHHHhc
Confidence 999888999999999975
No 462
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.25 E-value=4.6e-11 Score=107.78 Aligned_cols=134 Identities=19% Similarity=0.190 Sum_probs=99.1
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeeccccc-----chhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEEEe
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT-----KENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALE 125 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~-----~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV~E 125 (489)
..+++|+-+.+|.+.. -|.++++|.=.++.-. ..-......+|..++.++.--+|.-.+-++.|.....++||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 4578999999999966 3455777753322222 22233456678889988866566555555667777889999
Q ss_pred ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccc
Q 011287 126 SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~ 194 (489)
|.+|-.|.+.+... . -.++..+=.-+.-||..||+|+||.++||++..+ .+.++|||++..
T Consensus 80 ~I~G~~lkd~l~~~---~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~-~i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA---R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG-RIYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc---c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-cEEEEECCcccc
Confidence 99998888888765 1 4456666667788999999999999999999755 499999999874
No 463
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.19 E-value=5.1e-11 Score=96.75 Aligned_cols=85 Identities=22% Similarity=0.281 Sum_probs=69.2
Q ss_pred EEEeeehhhhhh--ccceeEEEecCCeEEEECCCCC--eeeeeeeccCCCCceEEEEcCCCcEEEEcCC-ceEEEE-cCC
Q 011287 400 MISMVKKLQKLT--SKKVQLILTNKPKLIYVDPSKL--VVKGNIIWSDNSNDLSIQVSSPSHFKIVTPK-KVLSFE-DAK 473 (489)
Q Consensus 400 ~~g~~~k~~g~~--~k~r~~~lt~~p~l~y~d~~~~--~~kg~i~~~~~~~~~~~~~~~~~~f~i~~p~-r~y~~~-d~~ 473 (489)
.+|||.|+++.. |++|+|+|.++-.+||.++... ...|.|+++.+ .+.........|.|.+++ |+|+|. +.+
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~~~~~~~~~i~l~~~--~~~~~~~~~~~F~i~~~~~~~~~~~a~s~ 78 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSSMRGKPRGTILLSGA--VISEDDSDDKCFTIDTGGDKTLHLRANSE 78 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCccCCCCceEEEEeceE--EEEECCCCCcEEEEEcCCCCEEEEECCCH
Confidence 379999988755 9999999998877788888766 88999999985 233333446899999987 999998 556
Q ss_pred ccHHHHHHHHHHh
Q 011287 474 QRASQWKKAIEAL 486 (489)
Q Consensus 474 ~~~~~W~~~i~~~ 486 (489)
.++.+|+.+|+.+
T Consensus 79 ~e~~~Wi~al~~a 91 (91)
T cd01246 79 EERQRWVDALELA 91 (91)
T ss_pred HHHHHHHHHHHhC
Confidence 8999999999863
No 464
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.19 E-value=5.3e-11 Score=102.22 Aligned_cols=72 Identities=18% Similarity=0.272 Sum_probs=61.2
Q ss_pred ccceeEEEecCCeEEEECCCCCeeeeeeeccCCCCceEEEEcC----------------CCcEEEEcCCceEEEEcC-Cc
Q 011287 412 SKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQVSS----------------PSHFKIVTPKKVLSFEDA-KQ 474 (489)
Q Consensus 412 ~k~r~~~lt~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~~~~----------------~~~f~i~~p~r~y~~~d~-~~ 474 (489)
|++|||+|.+.-.+||.||..+..+|+|.+... ..++... ...|.|.||+|||.|... +.
T Consensus 33 w~kRWFvlr~s~L~Y~~~~~~~~~~~vil~D~~---f~v~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~~ 109 (121)
T cd01254 33 WQKRWFIVKESFLAYMDDPSSAQILDVILFDVD---FKVNGGGKEDISLAVELKDITGLRHGLKITNSNRSLKLKCKSSR 109 (121)
T ss_pred CcceeEEEeCCEEEEEcCCCCCceeeEEEEcCC---ccEEeCCcccccccccccccCCCceEEEEEcCCcEEEEEeCCHH
Confidence 899999999988889999999999999999876 4555322 247999999999999955 58
Q ss_pred cHHHHHHHHHHh
Q 011287 475 RASQWKKAIEAL 486 (489)
Q Consensus 475 ~~~~W~~~i~~~ 486 (489)
++++|+++|+++
T Consensus 110 ~~~~Wi~~i~~a 121 (121)
T cd01254 110 KLKQWMASIEDA 121 (121)
T ss_pred HHHHHHHHHHhC
Confidence 999999999974
No 465
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.19 E-value=1.1e-10 Score=110.51 Aligned_cols=140 Identities=21% Similarity=0.231 Sum_probs=106.2
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCC--CCccEEEEEEEcC---CEEEEEEe
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDH--PGVVRLFFTFQDT---FSLYMALE 125 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~h--pnIv~l~~~~~~~---~~lylV~E 125 (489)
+.||.|..+.||++...+ |..|++|+....... .....+..|..+++.+.+ ..+.+++.+.... ...|+|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 678999999999998743 689999997654221 123457789999999865 3456677766553 25689999
Q ss_pred ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh------------------------------------------
Q 011287 126 SCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHS------------------------------------------ 163 (489)
Q Consensus 126 ~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~------------------------------------------ 163 (489)
|++|.++.+.+.. +.+++.....++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9999888765432 457777777788888888888874
Q ss_pred --------------CCcEeeccCCCCeeeCC--CCCEEEeeccCccc
Q 011287 164 --------------MGLIHRDIKPENLLLTA--DGHIKIADFGSVKP 194 (489)
Q Consensus 164 --------------~gIiHrDLKpeNILl~~--~g~ikL~DFG~a~~ 194 (489)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23599999999999998 66789999998763
No 466
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.17 E-value=3e-10 Score=102.12 Aligned_cols=144 Identities=21% Similarity=0.248 Sum_probs=107.6
Q ss_pred EeeEEeeeCceEEEEEEEcCCCcEEEEEEee-c----ccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEcCCEEEEE
Q 011287 49 LGKIYGVGSYSKVVRAKKIDTGTVYALKIMD-K----KFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMA 123 (489)
Q Consensus 49 ~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~-k----~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~lylV 123 (489)
.+.+|-+|+-+.|+.+.. .|+.+.||.-. | ..+..........+|..+|.++.--+|.-.--+|.|...-.++
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 678889999999999987 68888888432 2 2222223345667799999888655665445556677777799
Q ss_pred EeccCC-CChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC---CEEEeeccCccc
Q 011287 124 LESCEG-GELFDQITSKG--HLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG---HIKIADFGSVKP 194 (489)
Q Consensus 124 ~E~~~g-g~L~~~l~~~~--~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g---~ikL~DFG~a~~ 194 (489)
|||.+| .++.+++.... .........++..|=..+.-||.++|||+||..+||++..+| .+.|+|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999987 46777776542 233333478888999999999999999999999999998776 358999999763
No 467
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.07 E-value=1.8e-10 Score=94.14 Aligned_cols=84 Identities=17% Similarity=0.176 Sum_probs=64.8
Q ss_pred EEEeeehhhhh---hccceeEEEecCCeEEEECCCC--CeeeeeeeccCCCCceEEEEc---CCCcEEEEcCCceEEEE-
Q 011287 400 MISMVKKLQKL---TSKKVQLILTNKPKLIYVDPSK--LVVKGNIIWSDNSNDLSIQVS---SPSHFKIVTPKKVLSFE- 470 (489)
Q Consensus 400 ~~g~~~k~~g~---~~k~r~~~lt~~p~l~y~d~~~--~~~kg~i~~~~~~~~~~~~~~---~~~~f~i~~p~r~y~~~- 470 (489)
++|+|.|+++. .|++|+|+|.++-..||.|+.. ....|.|+++.+. +..... ....|.|.||+|+|+|.
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~~~~~~~~i~l~~~~--v~~~~~~~~~~~~f~i~~~~~~~~f~a 78 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDYDNAHVKEIDLRRCT--VRHNGKQPDRRFCFEVISPTKTWHFQA 78 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCcccccccceEEeccceE--EecCccccCCceEEEEEcCCcEEEEEC
Confidence 47999887743 4999999999877778877764 5678999998641 222222 35689999999999998
Q ss_pred cCCccHHHHHHHHHH
Q 011287 471 DAKQRASQWKKAIEA 485 (489)
Q Consensus 471 d~~~~~~~W~~~i~~ 485 (489)
+.+.++++|+.+|+.
T Consensus 79 ~s~~~~~~Wi~al~~ 93 (94)
T cd01250 79 DSEEERDDWISAIQE 93 (94)
T ss_pred CCHHHHHHHHHHHhc
Confidence 556899999999975
No 468
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.06 E-value=2.9e-09 Score=108.98 Aligned_cols=202 Identities=24% Similarity=0.282 Sum_probs=147.1
Q ss_pred ceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEE----cCCEEEEEEeccCC-CCh
Q 011287 58 YSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQ----DTFSLYMALESCEG-GEL 132 (489)
Q Consensus 58 ~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~----~~~~lylV~E~~~g-g~L 132 (489)
-.+.|+|...-+|..|++|.+.-......++. ..-.+.++++.|+|||++.++|. ....+++|++|.++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~---t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKD---TSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccc---hHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 35799999999999999999843333333222 22456789999999999998887 34568999999886 567
Q ss_pred HHHHHh---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 133 FDQITS---------------KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 133 ~~~l~~---------------~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
.++.-. ....+|..++.|+.||..||.++|+.|+..+-|.|.+||++.+.+++|..-|..-.+.+
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 665421 12468899999999999999999999999999999999999999888887776544332
Q ss_pred ccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCC-CCCCCHHHH-HHHHHhcCCCCC
Q 011287 198 SRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSP-FKDTSEWLI-FQRIIARDIRFP 275 (489)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~P-F~~~~~~~~-~~~i~~~~~~~p 275 (489)
+. + |-+.. ..+-|.=.||.+++.|.||..- ++....... ...| -
T Consensus 446 d~-----------------~-------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I-------~ 491 (655)
T KOG3741|consen 446 DP-----------------T-------EPLES---QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRI-------T 491 (655)
T ss_pred CC-----------------C-------cchhH---HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHh-------h
Confidence 21 0 11111 2346899999999999999533 222222111 2222 2
Q ss_pred CCCCHHHHHHHHHhhccCCCC
Q 011287 276 NYFSDAARDLIDRLLDVDPSG 296 (489)
Q Consensus 276 ~~~~~~~~~Li~~~L~~dP~~ 296 (489)
..++.+++++|.-+...++++
T Consensus 492 ~~yS~D~rn~v~yl~s~~~~~ 512 (655)
T KOG3741|consen 492 TTYSTDLRNVVEYLESLNFRE 512 (655)
T ss_pred hhhhHHHHHHHHHHHhcCccc
Confidence 347889999999999999884
No 469
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.03 E-value=7.1e-09 Score=101.44 Aligned_cols=134 Identities=18% Similarity=0.149 Sum_probs=93.7
Q ss_pred ceEEEEEEEcCCCcEEEEEEeeccccc---ch-----hHHHHHHHHHHHHHhCCCCC--ccEEEEEEEc-----CCEEEE
Q 011287 58 YSKVVRAKKIDTGTVYALKIMDKKFIT---KE-----NKTAYVKLERIVLDQLDHPG--VVRLFFTFQD-----TFSLYM 122 (489)
Q Consensus 58 ~g~Vy~a~~~~tg~~vAiK~~~k~~~~---~~-----~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~-----~~~lyl 122 (489)
...|+.+.. .|+.|.||........ +. .-.....+|...+.+|..-+ ...+..++.. ....++
T Consensus 35 ~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~L 112 (268)
T PRK15123 35 GRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFI 112 (268)
T ss_pred CceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEE
Confidence 334555543 5778999976432211 00 01113567888777773222 2344444432 235789
Q ss_pred EEeccCCC-ChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCC-------CCCEEEeeccCc
Q 011287 123 ALESCEGG-ELFDQITS--KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTA-------DGHIKIADFGSV 192 (489)
Q Consensus 123 V~E~~~gg-~L~~~l~~--~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~-------~g~ikL~DFG~a 192 (489)
|||++++. +|.+++.. ....+......++.+++..+..||..||+|+|+++.|||++. ++.+.|+||+.+
T Consensus 113 Vte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~ 192 (268)
T PRK15123 113 ITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA 192 (268)
T ss_pred EEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence 99999885 78888764 245677788899999999999999999999999999999975 468999999987
Q ss_pred c
Q 011287 193 K 193 (489)
Q Consensus 193 ~ 193 (489)
.
T Consensus 193 ~ 193 (268)
T PRK15123 193 Q 193 (268)
T ss_pred c
Confidence 5
No 470
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.99 E-value=3.4e-09 Score=98.00 Aligned_cols=129 Identities=22% Similarity=0.247 Sum_probs=84.5
Q ss_pred EEEEEEEcCCCcEEEEEEeeccc-----------------------ccchhHHHHHHHHHHHHHhCCCCC--ccEEEEEE
Q 011287 60 KVVRAKKIDTGTVYALKIMDKKF-----------------------ITKENKTAYVKLERIVLDQLDHPG--VVRLFFTF 114 (489)
Q Consensus 60 ~Vy~a~~~~tg~~vAiK~~~k~~-----------------------~~~~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~ 114 (489)
.||.|... .|..+|+|+..... ...........+|...|.++..-+ +.+++.+-
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48999874 57899999985321 011122345778999999997654 45565442
Q ss_pred EcCCEEEEEEeccC--CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHH-HHhCCcEeeccCCCCeeeCCCCCEEEeeccC
Q 011287 115 QDTFSLYMALESCE--GGELFDQITSKGHLSEDEARFYTAEVVDALEY-IHSMGLIHRDIKPENLLLTADGHIKIADFGS 191 (489)
Q Consensus 115 ~~~~~lylV~E~~~--gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~-LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~ 191 (489)
. -++||||++ |..+..+... .++......++.+++..+.. +|..||+|+||.+.|||++++ .+.++|||.
T Consensus 80 --~--~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~q 152 (188)
T PF01163_consen 80 --R--NVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQ 152 (188)
T ss_dssp --T--TEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTT
T ss_pred --C--CEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCc
Confidence 2 359999998 6555443332 23355677788888886666 579999999999999999876 999999999
Q ss_pred ccccC
Q 011287 192 VKPMQ 196 (489)
Q Consensus 192 a~~~~ 196 (489)
+....
T Consensus 153 av~~~ 157 (188)
T PF01163_consen 153 AVDSS 157 (188)
T ss_dssp EEETT
T ss_pred ceecC
Confidence 87543
No 471
>PF15409 PH_8: Pleckstrin homology domain
Probab=98.98 E-value=2.2e-09 Score=85.75 Aligned_cols=82 Identities=13% Similarity=0.174 Sum_probs=67.0
Q ss_pred Eeeehhhhhh---ccceeEEE--ecCCeEEEECCCCCeeeeeeeccCCCCceEEEEcCCCcEEEEcCCceEEEEcCC-cc
Q 011287 402 SMVKKLQKLT---SKKVQLIL--TNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQVSSPSHFKIVTPKKVLSFEDAK-QR 475 (489)
Q Consensus 402 g~~~k~~g~~---~k~r~~~l--t~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~~~~~~~f~i~~p~r~y~~~d~~-~~ 475 (489)
|++.|++.-. |.||+|+| .++-.-||.++.++.+.|.||++.+ ++++.. +...|.|.+...+|+|...+ .+
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~~~rGsi~v~~a--~is~~~-~~~~I~idsg~~i~hLKa~s~~~ 77 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNSGKLRGSIDVSLA--VISANK-KSRRIDIDSGDEIWHLKAKSQED 77 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCCCeeEeEEEccce--EEEecC-CCCEEEEEcCCeEEEEEcCCHHH
Confidence 5665554422 89999999 6777779999998899999999986 455554 45789999999999999654 89
Q ss_pred HHHHHHHHHHh
Q 011287 476 ASQWKKAIEAL 486 (489)
Q Consensus 476 ~~~W~~~i~~~ 486 (489)
.+.|+++++.+
T Consensus 78 f~~Wv~aL~~a 88 (89)
T PF15409_consen 78 FQRWVSALQKA 88 (89)
T ss_pred HHHHHHHHHhc
Confidence 99999999985
No 472
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=98.92 E-value=5.4e-09 Score=86.09 Aligned_cols=86 Identities=21% Similarity=0.305 Sum_probs=70.9
Q ss_pred EEEEEeeehhhh--hhccceeEEEecCCeEEEECCC---CCeeeeeeeccCCCCceEEEE----------cCCCcEEEEc
Q 011287 398 VLMISMVKKLQK--LTSKKVQLILTNKPKLIYVDPS---KLVVKGNIIWSDNSNDLSIQV----------SSPSHFKIVT 462 (489)
Q Consensus 398 i~~~g~~~k~~g--~~~k~r~~~lt~~p~l~y~d~~---~~~~kg~i~~~~~~~~~~~~~----------~~~~~f~i~~ 462 (489)
++++|+|.|++. ..||+|+|+|++.-.++|.++. ....++.|++... .+.. ...+.|.|.+
T Consensus 1 ~~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~----~v~~~~~~~~~~~~~~~~~f~i~~ 76 (104)
T PF00169_consen 1 CIKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDDC----TVRPDPSSDFLSNKKRKNCFEITT 76 (104)
T ss_dssp EEEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTTE----EEEEETSSTSTSTSSSSSEEEEEE
T ss_pred CEEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCccccceeeeEEEEecCc----eEEEcCccccccccCCCcEEEEEe
Confidence 578999999984 3399999999998888888887 6899999999984 3333 2357999999
Q ss_pred CCc-eEEEE-cCCccHHHHHHHHHHhc
Q 011287 463 PKK-VLSFE-DAKQRASQWKKAIEALQ 487 (489)
Q Consensus 463 p~r-~y~~~-d~~~~~~~W~~~i~~~~ 487 (489)
+++ +|+|. +.+.++..|+++|++++
T Consensus 77 ~~~~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 77 PNGKSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp TTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 886 99999 45589999999999975
No 473
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.90 E-value=7e-09 Score=86.17 Aligned_cols=87 Identities=23% Similarity=0.331 Sum_probs=69.4
Q ss_pred EEEEEeeehhhhhh--ccceeEEEecCCeEEEECC-----CCCeeeeeeeccCCCCceEEEEc----CCCcEEEEcCCce
Q 011287 398 VLMISMVKKLQKLT--SKKVQLILTNKPKLIYVDP-----SKLVVKGNIIWSDNSNDLSIQVS----SPSHFKIVTPKKV 466 (489)
Q Consensus 398 i~~~g~~~k~~g~~--~k~r~~~lt~~p~l~y~d~-----~~~~~kg~i~~~~~~~~~~~~~~----~~~~f~i~~p~r~ 466 (489)
.+++|++.|.++.+ ||.|+|+|-|.-.+||... ..-..++.|+++. ++++.. .++.|.|.++.|+
T Consensus 2 ~ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~----~~v~~~~~~~~~~~F~I~~~~rs 77 (101)
T cd01219 2 LLKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSG----MQVCEGDNLERPHSFLVSGKQRC 77 (101)
T ss_pred cccceEEEEEecCCCCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEeccc----EEEEeCCCCCcCceEEEecCCcE
Confidence 47899999999865 8999999999944455431 1347789999997 466553 3689999999999
Q ss_pred EEEEc-CCccHHHHHHHHHHhcC
Q 011287 467 LSFED-AKQRASQWKKAIEALQN 488 (489)
Q Consensus 467 y~~~d-~~~~~~~W~~~i~~~~~ 488 (489)
|++.. ++.+.++|+++|+++++
T Consensus 78 f~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 78 LELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred EEEEcCCHHHHHHHHHHHHHHhh
Confidence 99995 55899999999999875
No 474
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.85 E-value=2.4e-08 Score=95.56 Aligned_cols=138 Identities=22% Similarity=0.234 Sum_probs=103.2
Q ss_pred eEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccc------------------c-chhHHHHHHHHHHHHHhCCCC--
Q 011287 47 FELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFI------------------T-KENKTAYVKLERIVLDQLDHP-- 105 (489)
Q Consensus 47 y~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~------------------~-~~~~~~~~~~E~~il~~l~hp-- 105 (489)
+.++..||.|.-|.||.|.+. .|.++|||.=.-... . -.......++|..+|.+|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 467899999999999999986 589999996431100 0 011234566789999988544
Q ss_pred CccEEEEEEEcCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEE
Q 011287 106 GVVRLFFTFQDTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIK 185 (489)
Q Consensus 106 nIv~l~~~~~~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ik 185 (489)
.+.+.++ .+...+|||+.+|-.|... +++.+.+..++..|+.-+.-+-..||||+|+.+=||++++||.+.
T Consensus 172 ~VP~P~~----~nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~ 242 (304)
T COG0478 172 KVPKPIA----WNRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIV 242 (304)
T ss_pred CCCCccc----cccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEE
Confidence 4555553 3567799999999777542 234666667777777777777789999999999999999999999
Q ss_pred EeeccCccc
Q 011287 186 IADFGSVKP 194 (489)
Q Consensus 186 L~DFG~a~~ 194 (489)
++||--+..
T Consensus 243 vIDwPQ~v~ 251 (304)
T COG0478 243 VIDWPQAVP 251 (304)
T ss_pred EEeCccccc
Confidence 999976553
No 475
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.84 E-value=3.9e-08 Score=92.73 Aligned_cols=126 Identities=20% Similarity=0.293 Sum_probs=92.1
Q ss_pred CCcEEEEEEeecccccc----hhHHHHHHHHHHHHHhCCCCC--ccEEEEEEEcC----CEEEEEEeccCCC-ChHHHHH
Q 011287 69 TGTVYALKIMDKKFITK----ENKTAYVKLERIVLDQLDHPG--VVRLFFTFQDT----FSLYMALESCEGG-ELFDQIT 137 (489)
Q Consensus 69 tg~~vAiK~~~k~~~~~----~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~----~~lylV~E~~~gg-~L~~~l~ 137 (489)
.++.|-+|.+....... ........+|...+..|..-+ +.+.+.+.... ...|+|+|++++. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 46667777543321111 123344666777776663222 34455555432 3468999999884 7999888
Q ss_pred hCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCC---CEEEeeccCccc
Q 011287 138 SKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADG---HIKIADFGSVKP 194 (489)
Q Consensus 138 ~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g---~ikL~DFG~a~~ 194 (489)
.....+......++.+++..+.-||.+||+|+|++|.|||++.++ .+.|+||+-++.
T Consensus 111 ~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 111 QWEQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred hhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 755578888899999999999999999999999999999999887 899999998764
No 476
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.82 E-value=7.7e-09 Score=97.17 Aligned_cols=96 Identities=22% Similarity=0.301 Sum_probs=73.0
Q ss_pred ccccccCCCceEEEEEeeehhhh---hhccceeEEEecCCeEEEECC-CCCeeeeeeeccCCCCceEEEE-cCCCcEEEE
Q 011287 387 KWQQFLDPGESVLMISMVKKLQK---LTSKKVQLILTNKPKLIYVDP-SKLVVKGNIIWSDNSNDLSIQV-SSPSHFKIV 461 (489)
Q Consensus 387 ~~~~~~~~~~~i~~~g~~~k~~g---~~~k~r~~~lt~~p~l~y~d~-~~~~~kg~i~~~~~~~~~~~~~-~~~~~f~i~ 461 (489)
.-|.|++++ .+||+.|.+| ..||||||||||.=. ||.+- -..+.+|.|||...+ .-.|+. +.+..|++-
T Consensus 253 lthtffnpd----REGWLlKlgg~rvktWKrRWFiLtdNCL-YYFe~tTDKEPrGIIpLeNls-ir~VedP~kP~cfEly 326 (395)
T KOG0930|consen 253 LTHTFFNPD----REGWLLKLGGNRVKTWKRRWFILTDNCL-YYFEYTTDKEPRGIIPLENLS-IREVEDPKKPNCFELY 326 (395)
T ss_pred chhhccCcc----ccceeeeecCCcccchhheeEEeeccee-eeeeeccCCCCCcceeccccc-eeeccCCCCCCeEEEe
Confidence 456777755 4899999998 669999999999754 55554 467899999999742 223333 667888886
Q ss_pred cCCc----------------------eEEEEcCC-ccHHHHHHHHHHhcC
Q 011287 462 TPKK----------------------VLSFEDAK-QRASQWKKAIEALQN 488 (489)
Q Consensus 462 ~p~r----------------------~y~~~d~~-~~~~~W~~~i~~~~~ 488 (489)
.|+- +|.|+.++ .+.++|+++|..++.
T Consensus 327 ~ps~~gq~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is 376 (395)
T KOG0930|consen 327 IPSNKGQVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAIS 376 (395)
T ss_pred cCCCCcCeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhc
Confidence 6643 69999776 789999999998774
No 477
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.75 E-value=9.7e-08 Score=95.82 Aligned_cols=233 Identities=16% Similarity=0.208 Sum_probs=154.6
Q ss_pred EEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHh-CCCCCccEEEEEE-------EcCCE
Q 011287 48 ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQ-LDHPGVVRLFFTF-------QDTFS 119 (489)
Q Consensus 48 ~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~-l~hpnIv~l~~~~-------~~~~~ 119 (489)
..++.||+|+-+.+|..-.. ...+.|++.+.-.... .+ -+..|.. -.||-+-.=+.+- .....
T Consensus 14 ~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~--aq----k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQ--AQ----KVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred CCCccccCCccceeeecchh---hchhheeecCCCchHH--HH----HHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 35678999999999976442 2345688876532211 11 1122222 2566433211111 12233
Q ss_pred EEEEEeccCCCChHHHHH----h---CCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCc
Q 011287 120 LYMALESCEGGELFDQIT----S---KGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 120 lylV~E~~~gg~L~~~l~----~---~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a 192 (489)
+-|.|..+.|..--..+. + ...+.+.-+.+.+..|+.|...||..|-+-+|+.++|+|+++++.+.|.|-..-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccce
Confidence 778898888753222221 1 134788899999999999999999999999999999999999999999987654
Q ss_pred cccCCccccccCCCCCCCCccceecCCcCCChhhhc-----CCCCCCCCcchhhhHHHHHHhhC-CCCCCC-------CC
Q 011287 193 KPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLN-----SSPATFGNDLWALGCTLYQMLSG-TSPFKD-------TS 259 (489)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~-----~~~~~~~sDiwSLG~ilyelltG-~~PF~~-------~~ 259 (489)
..-. .......-+|.+.|.+||.-+ +..-+...|.|.||++||++|.| +.||.+ .+
T Consensus 165 qi~~-----------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~ 233 (637)
T COG4248 165 QINA-----------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPN 233 (637)
T ss_pred eecc-----------CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCC
Confidence 3221 123334568999999999865 33456778999999999999987 999975 22
Q ss_pred HHHHHHHHHhcC----------CC-CC-----CCCCHHHHHHHHHhhcc--CCCCCCCCCC
Q 011287 260 EWLIFQRIIARD----------IR-FP-----NYFSDAARDLIDRLLDV--DPSGRPGAGP 302 (489)
Q Consensus 260 ~~~~~~~i~~~~----------~~-~p-----~~~~~~~~~Li~~~L~~--dP~~R~t~~~ 302 (489)
..+. .|-.+. +. -| ..++++++.|+.+|+.. ++.-||++..
T Consensus 234 p~E~--~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 234 PLET--DIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred cchh--hhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 3331 122111 11 11 23689999999999964 3668999853
No 478
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.66 E-value=3.8e-08 Score=83.91 Aligned_cols=74 Identities=16% Similarity=0.188 Sum_probs=55.3
Q ss_pred ccceeEEEecCCeEEEECCCC---CeeeeeeeccCCCCceEE------EEcCCCcEEEEc--CC----------------
Q 011287 412 SKKVQLILTNKPKLIYVDPSK---LVVKGNIIWSDNSNDLSI------QVSSPSHFKIVT--PK---------------- 464 (489)
Q Consensus 412 ~k~r~~~lt~~p~l~y~d~~~---~~~kg~i~~~~~~~~~~~------~~~~~~~f~i~~--p~---------------- 464 (489)
||||||+|.++-..||.+|.. ....|.|+|..+. ...+ +...+++|.|.+ |+
T Consensus 19 W~RRWFvL~g~~L~y~k~p~d~~~~~Plg~I~L~~c~-~~~v~~~~r~~c~Rp~tF~i~~~~~~~~~~~~~~~~~~~~~~ 97 (122)
T cd01263 19 WHRRWCALEGGEIKYWKYPDDEKRKGPTGLIDLSTCT-SSEGASAVRDICARPNTFHLDVWRPKMETDDETLVSQCRRGI 97 (122)
T ss_pred ceEEEEEEeCCEEEEEcCCCccccCCceEEEEhhhCc-ccccccCChhhcCCCCeEEEEEecccccccccceeeccCCce
Confidence 999999999665557766654 5677999999863 2445 345678999953 43
Q ss_pred -ceEEEE--cCCccHHHHHHHHHHh
Q 011287 465 -KVLSFE--DAKQRASQWKKAIEAL 486 (489)
Q Consensus 465 -r~y~~~--d~~~~~~~W~~~i~~~ 486 (489)
|||++- |...+.++|+++||++
T Consensus 98 ~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 98 ERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred eEEEEEEecCCHHHHHHHHHHHhcC
Confidence 666644 7778999999999973
No 479
>PRK09902 hypothetical protein; Provisional
Probab=98.66 E-value=3.4e-07 Score=85.55 Aligned_cols=137 Identities=15% Similarity=0.160 Sum_probs=100.0
Q ss_pred eeeCceEEEEEEEcCCCcEEEEEEeeccc---ccchhHHHHHHHHHHHHHhCCCC--CccEEEEEEE-c----CCEEEEE
Q 011287 54 GVGSYSKVVRAKKIDTGTVYALKIMDKKF---ITKENKTAYVKLERIVLDQLDHP--GVVRLFFTFQ-D----TFSLYMA 123 (489)
Q Consensus 54 G~G~~g~Vy~a~~~~tg~~vAiK~~~k~~---~~~~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~-~----~~~lylV 123 (489)
|+||.|.|+.... .|+.|=+|.-.... .....-...+.+|...|..|..- .+.++. ++. . ....++|
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 6799999999875 34468888764211 11123456688899988888422 244444 222 1 2347899
Q ss_pred EeccCC-CChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCC--EEEeeccCcc
Q 011287 124 LESCEG-GELFDQITSK--GHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGH--IKIADFGSVK 193 (489)
Q Consensus 124 ~E~~~g-g~L~~~l~~~--~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~--ikL~DFG~a~ 193 (489)
+|-+.| -+|.+++... .+.++.....++.+++.++.-||+.|+.|+|+-+.||+++.+|. +.++||.-++
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 997764 5788877653 34577788899999999999999999999999999999987777 9999998765
No 480
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.64 E-value=2.1e-07 Score=76.75 Aligned_cols=87 Identities=11% Similarity=0.179 Sum_probs=64.4
Q ss_pred EEEEEeeehhhhhhccceeEEEecCCeEEEECC----CCCeeeeeeeccCCCCceEEEE-----cCCCcEEEEcCCceEE
Q 011287 398 VLMISMVKKLQKLTSKKVQLILTNKPKLIYVDP----SKLVVKGNIIWSDNSNDLSIQV-----SSPSHFKIVTPKKVLS 468 (489)
Q Consensus 398 i~~~g~~~k~~g~~~k~r~~~lt~~p~l~y~d~----~~~~~kg~i~~~~~~~~~~~~~-----~~~~~f~i~~p~r~y~ 468 (489)
.|++|+|.|..+.-.++|+|.|=+.-.||+... ..-...|.||+.. +.|+. ..++.|.|.+|+|+|.
T Consensus 2 ~ikEG~L~K~~~k~~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~----~~V~~~~~~~~~~~~F~I~~~~ks~~ 77 (99)
T cd01220 2 FIRQGCLLKLSKKGLQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRG----MLTEESEHEWGVPHCFTIFGGQCAIT 77 (99)
T ss_pred eeeEEEEEEEeCCCCceEEEEEccceEEEEEeecCCCceEEEEEEEEcCc----eEEeeccCCcCCceeEEEEcCCeEEE
Confidence 478999999876555555555555555555421 2336889999997 45554 2358999999999999
Q ss_pred EEcCC-ccHHHHHHHHHHhcC
Q 011287 469 FEDAK-QRASQWKKAIEALQN 488 (489)
Q Consensus 469 ~~d~~-~~~~~W~~~i~~~~~ 488 (489)
|..++ .+.++|+++|++++.
T Consensus 78 l~A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 78 VAASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred EECCCHHHHHHHHHHHHHHhh
Confidence 99655 899999999999874
No 481
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=98.64 E-value=4.9e-08 Score=82.64 Aligned_cols=87 Identities=22% Similarity=0.279 Sum_probs=53.5
Q ss_pred EEEeeehhhhhh---ccceeEEEe-cCCeEEEEC-------------CCCCeeeeeeeccCCCCceE-EE------EcCC
Q 011287 400 MISMVKKLQKLT---SKKVQLILT-NKPKLIYVD-------------PSKLVVKGNIIWSDNSNDLS-IQ------VSSP 455 (489)
Q Consensus 400 ~~g~~~k~~g~~---~k~r~~~lt-~~p~l~y~d-------------~~~~~~kg~i~~~~~~~~~~-~~------~~~~ 455 (489)
++|+|.|.+-.| ||+|||+|- |+-.+||.. +.....+|....+....... +. ....
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIHL 80 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-SS
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcCC
Confidence 579999888764 999999999 777777777 34444555554333211122 11 0113
Q ss_pred CcEEEEcCCceEEEE-cCCccHHHHHHHHHHh
Q 011287 456 SHFKIVTPKKVLSFE-DAKQRASQWKKAIEAL 486 (489)
Q Consensus 456 ~~f~i~~p~r~y~~~-d~~~~~~~W~~~i~~~ 486 (489)
+.|.|.||.|||+|. |.+.+..+|+++|.++
T Consensus 81 ~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 81 KVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp EEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred CCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 578899999999999 5668999999999863
No 482
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.64 E-value=4.7e-08 Score=80.26 Aligned_cols=74 Identities=12% Similarity=0.145 Sum_probs=62.7
Q ss_pred ccceeEEEecCCeEEEECCCCCeeeeeeeccCCCCceEEEE---cCCCcEEEEcCC----ceEEEE-cCCccHHHHHHHH
Q 011287 412 SKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQV---SSPSHFKIVTPK----KVLSFE-DAKQRASQWKKAI 483 (489)
Q Consensus 412 ~k~r~~~lt~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~~---~~~~~f~i~~p~----r~y~~~-d~~~~~~~W~~~i 483 (489)
||+|||+|.+.-..||.++.....+|.|.++..++++..++ +.+..|.+.+|. |+|+|. |.+.+..+|+.+.
T Consensus 20 ~KrrwF~lk~~~L~YyK~kee~~~~p~i~lnl~gcev~~dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya~Wmaa~ 99 (106)
T cd01237 20 YKQYWFTFRDTSISYYKSKEDSNGAPIGQLNLKGCEVTPDVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYAKWMAAC 99 (106)
T ss_pred heeEEEEEeCCEEEEEccchhcCCCCeEEEecCceEEcccccccccceEEEEecCCccCCeEEEEECCCHHHHHHHHHHH
Confidence 89999999987777998888778899999999888887776 545666677888 999999 6679999999987
Q ss_pred HH
Q 011287 484 EA 485 (489)
Q Consensus 484 ~~ 485 (489)
.-
T Consensus 100 rl 101 (106)
T cd01237 100 RL 101 (106)
T ss_pred HH
Confidence 54
No 483
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.62 E-value=4.3e-07 Score=85.23 Aligned_cols=142 Identities=20% Similarity=0.246 Sum_probs=93.4
Q ss_pred CCCCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHH------HHHHHHHHHhC---CCCCccEEE
Q 011287 41 HFSIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAY------VKLERIVLDQL---DHPGVVRLF 111 (489)
Q Consensus 41 ~~~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~------~~~E~~il~~l---~hpnIv~l~ 111 (489)
.+.-.+|.+.+++-.....-|.+..- +|+.+++|.........+..... ..++...+.++ .--.+..++
T Consensus 27 ~i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~y 104 (229)
T PF06176_consen 27 KILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPY 104 (229)
T ss_pred HHHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccce
Confidence 34457889999998877777777654 67999999886543332222221 22233333333 222233333
Q ss_pred EEEE-----cCCEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEE
Q 011287 112 FTFQ-----DTFSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKI 186 (489)
Q Consensus 112 ~~~~-----~~~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL 186 (489)
.+.. -....+++|||++|..|.+... +++ .++..|+.++.-||+.|++|+|.+|.|++++++ .+++
T Consensus 105 l~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~i 175 (229)
T PF06176_consen 105 LAAEKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRI 175 (229)
T ss_pred eeeeeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEE
Confidence 2222 2334568999999988766432 333 245677788999999999999999999999855 5999
Q ss_pred eeccCcc
Q 011287 187 ADFGSVK 193 (489)
Q Consensus 187 ~DFG~a~ 193 (489)
+||+..+
T Consensus 176 ID~~~k~ 182 (229)
T PF06176_consen 176 IDTQGKR 182 (229)
T ss_pred EECcccc
Confidence 9998755
No 484
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.55 E-value=7e-07 Score=99.60 Aligned_cols=203 Identities=24% Similarity=0.342 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHHhCCCCCccEEEEEEEcCCE----EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 011287 89 TAYVKLERIVLDQLDHPGVVRLFFTFQDTFS----LYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSM 164 (489)
Q Consensus 89 ~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~----lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~ 164 (489)
......|...+....|+|++.++.+-..... +.+..++|..-++...++..+..+..+.+.+..+++.+|.++|+.
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh
Confidence 4455667778888899999999887754433 234458999999999999999999999999999999999999999
Q ss_pred CcEeeccCCC---CeeeCCCCCEEEe--eccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCC--Cc
Q 011287 165 GLIHRDIKPE---NLLLTADGHIKIA--DFGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFG--ND 237 (489)
Q Consensus 165 gIiHrDLKpe---NILl~~~g~ikL~--DFG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~--sD 237 (489)
...|.-+... +--++..+.+..+ ||+..+.+.... ......-+..+.+||.+....+..+ .|
T Consensus 306 ~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~-----------~~~~~~~~~~~~~~e~~~~~~~~~~r~~d 374 (1351)
T KOG1035|consen 306 SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNE-----------KSFSDLLAEIRNADEDLKENTAKKSRLTD 374 (1351)
T ss_pred ccceeEEecccccccccCccceeecchhhhcccccCCCcc-----------cchhhcCccccccccccccccchhhhhhH
Confidence 7777666555 4455566677777 998887665432 2223345667888998877776554 69
Q ss_pred chhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCC
Q 011287 238 LWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKG 316 (489)
Q Consensus 238 iwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~ 316 (489)
+|++|....++..|..+-... .....++ +........+++.+|+.-++++|+++ .+++.|+|.+-
T Consensus 375 L~~lgll~~~~~~~~~i~~~~---~~~~~~l------~~~~~~~~~d~~~~~~~~~~~~Rl~~-----~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 375 LWCLGLLLLQLSQGEDISEKS---AVPVSLL------DVLSTSELLDALPKCLDEDSEERLSA-----LELLTHPFLRF 439 (1351)
T ss_pred HHHHHHHHhhhhhcCcccccc---cchhhhh------ccccchhhhhhhhhhcchhhhhccch-----hhhhhchhccc
Confidence 999999999999886443211 0111111 11222378899999999999999999 77999998763
No 485
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.54 E-value=1.8e-07 Score=99.15 Aligned_cols=142 Identities=23% Similarity=0.295 Sum_probs=92.5
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeeccccc---------------------------c----hhHHH------HHH
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFIT---------------------------K----ENKTA------YVK 93 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~---------------------------~----~~~~~------~~~ 93 (489)
..|+.+|-|+||.|+.+. |+.||||+....-.. . +.... ...
T Consensus 131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 788999999999999965 999999997432100 0 00111 122
Q ss_pred HHHHHHHhC-----CCCCccEEEEEEEcCCEEEEEEeccCCCChHHH--HHhCCCCCHHHHHHHHHHHHHH-HHHHHhCC
Q 011287 94 LERIVLDQL-----DHPGVVRLFFTFQDTFSLYMALESCEGGELFDQ--ITSKGHLSEDEARFYTAEVVDA-LEYIHSMG 165 (489)
Q Consensus 94 ~E~~il~~l-----~hpnIv~l~~~~~~~~~lylV~E~~~gg~L~~~--l~~~~~l~e~~~~~i~~qil~a-L~~LH~~g 165 (489)
+|...+.++ +.|+|.-..-+.+-...-.++|||++|-.+.+. +.. ..++... ++..++.+ +..+-..|
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~---ia~~~~~~f~~q~~~dg 285 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKE---LAELLVRAFLRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHH---HHHHHHHHHHHHHHhcC
Confidence 344444443 244443222233345567899999999888776 444 3355333 33333332 23334589
Q ss_pred cEeeccCCCCeeeCCCCCEEEeeccCccccCC
Q 011287 166 LIHRDIKPENLLLTADGHIKIADFGSVKPMQD 197 (489)
Q Consensus 166 IiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~ 197 (489)
++|.|.+|.||+++.+|++.+.|||....+.+
T Consensus 286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 99999999999999999999999999887654
No 486
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.49 E-value=9e-09 Score=107.82 Aligned_cols=242 Identities=20% Similarity=0.228 Sum_probs=166.4
Q ss_pred CCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCC-ccEEEEEEEcCCEEEE
Q 011287 44 IQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG-VVRLFFTFQDTFSLYM 122 (489)
Q Consensus 44 ~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpn-Iv~l~~~~~~~~~lyl 122 (489)
..-|.+...+++|+++.+++.+...+...+ .+.+... ....-++++|.+++||| .+..++-++.+...++
T Consensus 241 ~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i 311 (829)
T KOG0576|consen 241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWI 311 (829)
T ss_pred ccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCcccccch
Confidence 344678888899999999999876654444 5554332 33445788999999999 6777777777888999
Q ss_pred EEeccCCC-ChHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccCCCCeeeCCCCCEEEeeccCccccCCccc
Q 011287 123 ALESCEGG-ELFDQIT-SKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIKPENLLLTADGHIKIADFGSVKPMQDSRI 200 (489)
Q Consensus 123 V~E~~~gg-~L~~~l~-~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~~~~~~~~ 200 (489)
+++++.++ +-...+. ..-.+.+-+.......-..+|++||+.--+||| ||+..+ +..++.||+....+...
T Consensus 312 ~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~-- 384 (829)
T KOG0576|consen 312 PMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRT-- 384 (829)
T ss_pred hhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCcc--
Confidence 99999887 2211111 111234444555666778889999998778998 777754 68999999987655332
Q ss_pred cccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHHhcCCCCCC----
Q 011287 201 TVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRIIARDIRFPN---- 276 (489)
Q Consensus 201 ~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~~~~~~~p~---- 276 (489)
...+++.+|+.++|||+.....+....|.|++|+--.+|.-|-+|-...-. ....+-.+ ..-|.
T Consensus 385 ---------~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~--~~~~~g~~-p~s~~L~~~ 452 (829)
T KOG0576|consen 385 ---------MKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPA--VLPMIGNG-PNSPMLTDK 452 (829)
T ss_pred ---------cccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCcc--ccCCCCCC-CCccccchh
Confidence 135678899999999999999999999999999877788878777544110 00000000 00000
Q ss_pred -CCCHHHH-HHHHHhhccCCCCCCCCCCCCHHHHhcCCCCCCCC
Q 011287 277 -YFSDAAR-DLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFKGID 318 (489)
Q Consensus 277 -~~~~~~~-~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~~i~ 318 (489)
.+++... ++...||..-|..|+.. ....-|.+|.+..
T Consensus 453 ~aw~~~~~~~~~~~~~~g~P~~pkv~-----mgacfsKvfngCp 491 (829)
T KOG0576|consen 453 SAWSPVFHRDFPAPCLNGLPPTPKVH-----MGACFSKVFNGCP 491 (829)
T ss_pred hhcCcccccCCcccccCCCCCCCcch-----hhHHHHHHhccCc
Confidence 1111122 47778898999999888 5677888888754
No 487
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.47 E-value=2e-06 Score=82.26 Aligned_cols=133 Identities=17% Similarity=0.158 Sum_probs=83.5
Q ss_pred eEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCC--ccEEEEEEEcCCEEEEEEeccC
Q 011287 51 KIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPG--VVRLFFTFQDTFSLYMALESCE 128 (489)
Q Consensus 51 ~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpn--Iv~l~~~~~~~~~lylV~E~~~ 128 (489)
..||.|..+.||+. .|..+++|...... ....+.+|..+++.+..-+ +.+++.+..+.....+|||+++
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence 57899999999984 25578899875432 2234678999998885433 4667777777788899999999
Q ss_pred CCC-hH--------------HHH-------HhC--CCCCHHH-HHHHHH----------HHHHH-HHHHHh----CCcEe
Q 011287 129 GGE-LF--------------DQI-------TSK--GHLSEDE-ARFYTA----------EVVDA-LEYIHS----MGLIH 168 (489)
Q Consensus 129 gg~-L~--------------~~l-------~~~--~~l~e~~-~~~i~~----------qil~a-L~~LH~----~gIiH 168 (489)
|.+ +. ..+ ... ....... ...+.. .+... ..+|.. ..++|
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 863 11 111 100 0011000 000100 01111 122221 24789
Q ss_pred eccCCCCeeeCCCCCEEEeeccCcc
Q 011287 169 RDIKPENLLLTADGHIKIADFGSVK 193 (489)
Q Consensus 169 rDLKpeNILl~~~g~ikL~DFG~a~ 193 (489)
+|+.|.||++++++ +.++||+.+.
T Consensus 158 gD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 158 GDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred cCCCCCcEEEcCCC-cEEEechhcC
Confidence 99999999999888 9999999875
No 488
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.42 E-value=2.7e-06 Score=80.84 Aligned_cols=140 Identities=19% Similarity=0.148 Sum_probs=96.3
Q ss_pred eeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccch---------------------hHHHHHHHHHHHHHhCC--CCC
Q 011287 50 GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE---------------------NKTAYVKLERIVLDQLD--HPG 106 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~---------------------~~~~~~~~E~~il~~l~--hpn 106 (489)
...|+.|.-+.||+|.. .++..+|+|++......-. ....-...|...|+++. +-.
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 33777888899999986 4689999999864321111 11223445777777773 333
Q ss_pred ccEEEEEEEcCCEEEEEEeccCCC-ChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCcEeeccCCCCeeeCCCCCE
Q 011287 107 VVRLFFTFQDTFSLYMALESCEGG-ELFDQITSKGHLSEDEARFYTAEVVDALEYIHS-MGLIHRDIKPENLLLTADGHI 184 (489)
Q Consensus 107 Iv~l~~~~~~~~~lylV~E~~~gg-~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~-~gIiHrDLKpeNILl~~~g~i 184 (489)
+.+.+.++. -.+||||+... .-...|.. -.+...++..+..+++..+.-|-. .|+||+||+.=|||+. +|.+
T Consensus 132 vP~Pi~~~~----nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 132 VPEPIAFRN----NVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred CCCceeecC----CeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeE
Confidence 445555444 35999998543 11112221 123444788889999999998876 8999999999999998 8899
Q ss_pred EEeeccCccccC
Q 011287 185 KIADFGSVKPMQ 196 (489)
Q Consensus 185 kL~DFG~a~~~~ 196 (489)
.++|||-|....
T Consensus 206 ~iID~~QaV~~~ 217 (268)
T COG1718 206 YIIDVSQAVTID 217 (268)
T ss_pred EEEECccccccC
Confidence 999999987654
No 489
>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]
Probab=98.38 E-value=1.1e-07 Score=102.52 Aligned_cols=101 Identities=23% Similarity=0.279 Sum_probs=77.4
Q ss_pred ccccccC-CCceEEEEEeeehhhhhh--ccceeEEEec-CCeEEEECC-CCCeeeeeeeccCCCCceEEEEc---CCCcE
Q 011287 387 KWQQFLD-PGESVLMISMVKKLQKLT--SKKVQLILTN-KPKLIYVDP-SKLVVKGNIIWSDNSNDLSIQVS---SPSHF 458 (489)
Q Consensus 387 ~~~~~~~-~~~~i~~~g~~~k~~g~~--~k~r~~~lt~-~p~l~y~d~-~~~~~kg~i~~~~~~~~~~~~~~---~~~~f 458 (489)
.+.+|-. +.|.-+.+|.+.|||.+- ||.|||||.. .+.|+|+|- ...+.||.|.|-...++.-+-.| .++-|
T Consensus 1622 ly~qf~s~~teNr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~edt~pkG~IdLaevesv~~~~~k~vdekgff 1701 (1732)
T KOG1090|consen 1622 LYRQFMSPPTENRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFEDTKPKGCIDLAEVESVALIGPKTVDEKGFF 1701 (1732)
T ss_pred hhhhhcCCcccccCcccchhhcchhhcccccceeEecCCccceeeecccccccccchhhhhhhhhhcccCccccCcccee
Confidence 3555544 355568899999999866 9999999987 888877665 56789999999875333221112 24678
Q ss_pred EEEcCCceEEEEcCC-ccHHHHHHHHHHhc
Q 011287 459 KIVTPKKVLSFEDAK-QRASQWKKAIEALQ 487 (489)
Q Consensus 459 ~i~~p~r~y~~~d~~-~~~~~W~~~i~~~~ 487 (489)
.++|.+|+|.|..-+ +.|++|+++|+..+
T Consensus 1702 dlktt~rvynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1702 DLKTTNRVYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred eeehhhHHHHHHhccchHHHHHHHHHHHhh
Confidence 899999999999666 89999999999865
No 490
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=98.36 E-value=1e-06 Score=71.42 Aligned_cols=87 Identities=20% Similarity=0.235 Sum_probs=67.4
Q ss_pred EEEEeeehhhh---hhccceeEEEecCCeEEEECCCC---CeeeeeeeccCCCCceEEEEc-----CCCcEEEEcCCc-e
Q 011287 399 LMISMVKKLQK---LTSKKVQLILTNKPKLIYVDPSK---LVVKGNIIWSDNSNDLSIQVS-----SPSHFKIVTPKK-V 466 (489)
Q Consensus 399 ~~~g~~~k~~g---~~~k~r~~~lt~~p~l~y~d~~~---~~~kg~i~~~~~~~~~~~~~~-----~~~~f~i~~p~r-~ 466 (489)
+++|+|.++.+ ..|++|+++|++.-..+|.++.. ....+.|+++.. .+..... ....|.|.++++ +
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~--~v~~~~~~~~~~~~~~f~l~~~~~~~ 79 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSGI--TVREAPDPDSAKKPHCFEIKTADRRS 79 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCcC--EEEeCCCCccCCCceEEEEEecCCce
Confidence 67899988774 33999999999977777777654 567899999985 2222222 367899998887 9
Q ss_pred EEEEcC-CccHHHHHHHHHHhc
Q 011287 467 LSFEDA-KQRASQWKKAIEALQ 487 (489)
Q Consensus 467 y~~~d~-~~~~~~W~~~i~~~~ 487 (489)
|+|..+ ..++.+|+++|+.++
T Consensus 80 ~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 80 YLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred EEEEcCCHHHHHHHHHHHHHhh
Confidence 999855 589999999999865
No 491
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.34 E-value=9e-06 Score=77.05 Aligned_cols=137 Identities=26% Similarity=0.292 Sum_probs=81.8
Q ss_pred eeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCC--CccEEEEEEE---cCCEEEEEE
Q 011287 50 GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHP--GVVRLFFTFQ---DTFSLYMAL 124 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp--nIv~l~~~~~---~~~~lylV~ 124 (489)
++.|+.|..+.||++.... ..+++|+.... .....+..|..+++.+... .+.+++.... .....+++|
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 5789999999999999854 59999986443 3455677788888877433 2455665432 334579999
Q ss_pred eccCCCChHH----------------HHH---hC----CCCCHHH------HHHH---------------HHHHHH-HHH
Q 011287 125 ESCEGGELFD----------------QIT---SK----GHLSEDE------ARFY---------------TAEVVD-ALE 159 (489)
Q Consensus 125 E~~~gg~L~~----------------~l~---~~----~~l~e~~------~~~i---------------~~qil~-aL~ 159 (489)
++++|..+.. .+. .. ..+.... .... ...+.. .+.
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 9999987766 111 11 0111000 0000 111222 233
Q ss_pred HHHh-------CCcEeeccCCCCeeeC-CCCCEEEeeccCcc
Q 011287 160 YIHS-------MGLIHRDIKPENLLLT-ADGHIKIADFGSVK 193 (489)
Q Consensus 160 ~LH~-------~gIiHrDLKpeNILl~-~~g~ikL~DFG~a~ 193 (489)
.++. ..++|+|+.|.|||++ .++.+-|+||+.+.
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 3332 3599999999999999 66677899999875
No 492
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.33 E-value=1.9e-06 Score=71.89 Aligned_cols=76 Identities=16% Similarity=0.244 Sum_probs=54.2
Q ss_pred hhccceeEEEecCCeEEEECCCCC--eeeeeeeccCCCCceEEE---EcCCCcEEEEcC-CceEEEE-cCCccHHHHHHH
Q 011287 410 LTSKKVQLILTNKPKLIYVDPSKL--VVKGNIIWSDNSNDLSIQ---VSSPSHFKIVTP-KKVLSFE-DAKQRASQWKKA 482 (489)
Q Consensus 410 ~~~k~r~~~lt~~p~l~y~d~~~~--~~kg~i~~~~~~~~~~~~---~~~~~~f~i~~p-~r~y~~~-d~~~~~~~W~~~ 482 (489)
-.|++|+++|++.-..||.|+... ...|+||++-....+.+. .+.++.|.|.++ +++|+|. +.+.++++|+.+
T Consensus 21 ~~Wk~r~~vL~~~~L~~ykd~~~~~~~~~~~~~i~l~~~~i~~~~~~~k~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~a 100 (104)
T cd01253 21 RSWDNVYGVLCGQSLSFYKDEKMAAENVHGEPPVDLTGAQCEVASDYTKKKHVFRLRLPDGAEFLFQAPDEEEMSSWVRA 100 (104)
T ss_pred CCcceEEEEEeCCEEEEEecCcccccCCCCCCcEeccCCEEEecCCcccCceEEEEEecCCCEEEEECCCHHHHHHHHHH
Confidence 459999999999888899988643 445655655422222222 144688999765 6999998 556899999999
Q ss_pred HHH
Q 011287 483 IEA 485 (489)
Q Consensus 483 i~~ 485 (489)
|+.
T Consensus 101 L~~ 103 (104)
T cd01253 101 LKS 103 (104)
T ss_pred Hhc
Confidence 974
No 493
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.22 E-value=4.5e-05 Score=70.93 Aligned_cols=128 Identities=23% Similarity=0.308 Sum_probs=89.0
Q ss_pred CCeEEeeEEeeeCc-eEEEEEEEcCCCcEEEEEEeec---cc-------ccc-h-------hHHHHHHHHHHHHHhC---
Q 011287 45 QDFELGKIYGVGSY-SKVVRAKKIDTGTVYALKIMDK---KF-------ITK-E-------NKTAYVKLERIVLDQL--- 102 (489)
Q Consensus 45 ~dy~~~~~LG~G~~-g~Vy~a~~~~tg~~vAiK~~~k---~~-------~~~-~-------~~~~~~~~E~~il~~l--- 102 (489)
.++++++.||.|+- |.||+++- .|+.||+|++.. .. ... + ....-+..|-....+|
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 79999999999999 99999987 688999999422 00 000 0 1223355566665555
Q ss_pred CCCCc--cEEEEEEEcC------------------CEEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH
Q 011287 103 DHPGV--VRLFFTFQDT------------------FSLYMALESCEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIH 162 (489)
Q Consensus 103 ~hpnI--v~l~~~~~~~------------------~~lylV~E~~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH 162 (489)
++.++ |++++++.-. ...-+|.||+.... .++.. -+.+|+.-|..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~~----~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQIR----DIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccchh----HHHHHHHHHHHHH
Confidence 45566 8999888311 11356778776543 22333 3467777788899
Q ss_pred hCCcEeeccCCCCeeeCCCCCEEEeeccCc
Q 011287 163 SMGLIHRDIKPENLLLTADGHIKIADFGSV 192 (489)
Q Consensus 163 ~~gIiHrDLKpeNILl~~~g~ikL~DFG~a 192 (489)
..||+-+|+++.|.. .-+|+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HCCeeeccCcccccc-----CCEEEecccC
Confidence 999999999999976 2389999864
No 494
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.15 E-value=1.8e-05 Score=76.30 Aligned_cols=134 Identities=16% Similarity=0.061 Sum_probs=82.2
Q ss_pred EEeeeCc-eEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCC-CCCccEEEEEEEcCCEEEEEEeccCC
Q 011287 52 IYGVGSY-SKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLD-HPGVVRLFFTFQDTFSLYMALESCEG 129 (489)
Q Consensus 52 ~LG~G~~-g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~lylV~E~~~g 129 (489)
.|..|.. +.||++... +..+.+|+..... ...+.+|..+++.+. +--+.+++.+.......++|||+++|
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 76 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG 76 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence 3445555 789999753 4688889875432 234566888888773 33456778877776678999999998
Q ss_pred CChHHHH----------------HhCC-------CCCHH------HHHHHHH----------------HHHHHHHHHH--
Q 011287 130 GELFDQI----------------TSKG-------HLSED------EARFYTA----------------EVVDALEYIH-- 162 (489)
Q Consensus 130 g~L~~~l----------------~~~~-------~l~e~------~~~~i~~----------------qil~aL~~LH-- 162 (489)
.+|.... .+-. .+... .....+. .+...+..|-
T Consensus 77 ~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 156 (244)
T cd05150 77 VPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEAT 156 (244)
T ss_pred ccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhh
Confidence 7665331 1000 01100 0000000 0111122221
Q ss_pred -----hCCcEeeccCCCCeeeCCCCCEEEeeccCcc
Q 011287 163 -----SMGLIHRDIKPENLLLTADGHIKIADFGSVK 193 (489)
Q Consensus 163 -----~~gIiHrDLKpeNILl~~~g~ikL~DFG~a~ 193 (489)
...++|+|+.|.|||+++++.+.|+||+.|.
T Consensus 157 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 157 RPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred CCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 2348999999999999988778899999875
No 495
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.13 E-value=1.4e-05 Score=84.63 Aligned_cols=140 Identities=21% Similarity=0.326 Sum_probs=88.2
Q ss_pred eeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccch-----------------------------hHHHHH------HH
Q 011287 50 GKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKE-----------------------------NKTAYV------KL 94 (489)
Q Consensus 50 ~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~-----------------------------~~~~~~------~~ 94 (489)
-+.||..+.|+||+|+.+. |+.||||+-+.. +.+. +....+ .+
T Consensus 166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~-l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~ 243 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHPG-LEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTK 243 (538)
T ss_pred cchhhhcchhheEEEEecC-CCEEEEEecCcC-hHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHH
Confidence 3688999999999999976 999999986432 1110 001111 12
Q ss_pred HHHHH----HhCCCCC------ccEEEEEEEcCCEEEEEEeccCCCChHH--HHHhCCCCCHHHHHHHHHHHHHHHHH-H
Q 011287 95 ERIVL----DQLDHPG------VVRLFFTFQDTFSLYMALESCEGGELFD--QITSKGHLSEDEARFYTAEVVDALEY-I 161 (489)
Q Consensus 95 E~~il----~~l~hpn------Iv~l~~~~~~~~~lylV~E~~~gg~L~~--~l~~~~~l~e~~~~~i~~qil~aL~~-L 161 (489)
|.+.. +.+.|-+ |.++|-.+ ...-.++||||+|..+.+ .|.+.| ++...+ +..+.++... +
T Consensus 244 EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~g-i~~~~i---~~~l~~~~~~qI 317 (538)
T KOG1235|consen 244 EAKNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKRG-ISPHDI---LNKLVEAYLEQI 317 (538)
T ss_pred HHHhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHcC-CCHHHH---HHHHHHHHHHHH
Confidence 22222 2223433 33333332 235679999999976644 555554 555533 3333333222 3
Q ss_pred HhCCcEeeccCCCCeeeCC----CCCEEEeeccCccccCC
Q 011287 162 HSMGLIHRDIKPENLLLTA----DGHIKIADFGSVKPMQD 197 (489)
Q Consensus 162 H~~gIiHrDLKpeNILl~~----~g~ikL~DFG~a~~~~~ 197 (489)
-..|++|+|=+|.||+++. ++.+.+.|||+...+..
T Consensus 318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 3578999999999999994 56899999999876544
No 496
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.10 E-value=2e-05 Score=71.09 Aligned_cols=129 Identities=22% Similarity=0.284 Sum_probs=93.7
Q ss_pred EEeeEEeeeCceEEEEEEEcCCCcEEEEEEeecccccchhHHHHHHHHHHHHHhCCCCCcc-EEEEEEEcCCEEEEEEec
Q 011287 48 ELGKIYGVGSYSKVVRAKKIDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVV-RLFFTFQDTFSLYMALES 126 (489)
Q Consensus 48 ~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~k~~~~~~~~~~~~~~E~~il~~l~hpnIv-~l~~~~~~~~~lylV~E~ 126 (489)
.+.+.||+|.+|.||++.+ .|.++|+|+-.. +.....+..|.++|..+.-.++. ++|.+-.+. +.|||
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~-----ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~~----i~me~ 93 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRR-----DSPRRNLEKEAKILEILAGEGVTPEVYFYGEDF----IRMEY 93 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecC-----CcchhhHHHHHHHHHHhhhcCCCceEEEechhh----hhhhh
Confidence 5678899999999999998 567999998643 34556688899999999877665 455554432 55999
Q ss_pred cCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCcEeeccC-CCCeeeCCCCCEEEeeccCccc
Q 011287 127 CEGGELFDQITSKGHLSEDEARFYTAEVVDALEYIHSMGLIHRDIK-PENLLLTADGHIKIADFGSVKP 194 (489)
Q Consensus 127 ~~gg~L~~~l~~~~~l~e~~~~~i~~qil~aL~~LH~~gIiHrDLK-peNILl~~~g~ikL~DFG~a~~ 194 (489)
+.|-.|.+.-... + +.-...++++---|-..||-|..|. |..++|-.++.+.|+||..|+.
T Consensus 94 i~G~~L~~~~~~~---~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 94 IDGRPLGKLEIGG---D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hcCcchhhhhhcc---c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 9997776644321 1 3334455555445677899999986 5555665667999999999874
No 497
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.08 E-value=2.8e-05 Score=64.52 Aligned_cols=88 Identities=18% Similarity=0.255 Sum_probs=67.2
Q ss_pred CceEEEEEeeehhhhhhccceeEEEecCCeEEEECC----CCCeeeeeeeccCCCCceEEEEc-C----CCcEEEEcCCc
Q 011287 395 GESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDP----SKLVVKGNIIWSDNSNDLSIQVS-S----PSHFKIVTPKK 465 (489)
Q Consensus 395 ~~~i~~~g~~~k~~g~~~k~r~~~lt~~p~l~y~d~----~~~~~kg~i~~~~~~~~~~~~~~-~----~~~f~i~~p~r 465 (489)
|+..+++|.+.|.-..-.+.|+|.|=+. .|+|-.. ..-+..+.||+.. +.++.. . ++.|.|.+|.|
T Consensus 1 gR~li~eG~L~K~~rk~~~~R~ffLFnD-~LvY~~~~~~~~~~~~~~~i~L~~----~~v~~~~d~~~~~n~f~I~~~~k 75 (104)
T cd01218 1 GRVLVGEGVLTKMCRKKPKQRQFFLFND-ILVYGNIVISKKKYNKQHILPLEG----VQVESIEDDGIERNGWIIKTPTK 75 (104)
T ss_pred CCEEEecCcEEEeecCCCceEEEEEecC-EEEEEEeecCCceeeEeeEEEccc----eEEEecCCcccccceEEEecCCe
Confidence 4456889999987766677899999888 6666543 1235568999997 455432 2 48999999999
Q ss_pred eEEEEcCC-ccHHHHHHHHHHhc
Q 011287 466 VLSFEDAK-QRASQWKKAIEALQ 487 (489)
Q Consensus 466 ~y~~~d~~-~~~~~W~~~i~~~~ 487 (489)
++.+..++ .+-.+|+++|++++
T Consensus 76 Sf~v~A~s~~eK~eWl~~i~~ai 98 (104)
T cd01218 76 SFAVYAATETEKREWMLHINKCV 98 (104)
T ss_pred EEEEEcCCHHHHHHHHHHHHHHH
Confidence 99999655 78999999999876
No 498
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.08 E-value=9.8e-06 Score=64.79 Aligned_cols=83 Identities=20% Similarity=0.281 Sum_probs=64.5
Q ss_pred EEeeehhhhh---hccceeEEEecCCeEEEECCCC---CeeeeeeeccCCCCceEEEEc---CCCcEEEEcCC-ceEEEE
Q 011287 401 ISMVKKLQKL---TSKKVQLILTNKPKLIYVDPSK---LVVKGNIIWSDNSNDLSIQVS---SPSHFKIVTPK-KVLSFE 470 (489)
Q Consensus 401 ~g~~~k~~g~---~~k~r~~~lt~~p~l~y~d~~~---~~~kg~i~~~~~~~~~~~~~~---~~~~f~i~~p~-r~y~~~ 470 (489)
.|+|.++.+. .|++|+++|++.-.++|.++.. ...++.|++... .+..... ....|.|.+++ ++|+|.
T Consensus 2 ~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~--~v~~~~~~~~~~~~f~i~~~~~~~~~~~ 79 (96)
T cd00821 2 EGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSGA--EVEESPDDSGRKNCFEIRTPDGRSYLLQ 79 (96)
T ss_pred cchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCCC--EEEECCCcCCCCcEEEEecCCCcEEEEE
Confidence 5888777653 5999999999887777777765 688899999974 2333333 25799999877 999998
Q ss_pred cC-CccHHHHHHHHHH
Q 011287 471 DA-KQRASQWKKAIEA 485 (489)
Q Consensus 471 d~-~~~~~~W~~~i~~ 485 (489)
.. ..+++.|+++|+.
T Consensus 80 ~~s~~~~~~W~~~l~~ 95 (96)
T cd00821 80 AESEEEREEWIEALQS 95 (96)
T ss_pred eCCHHHHHHHHHHHhc
Confidence 55 4799999999986
No 499
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.07 E-value=1.9e-05 Score=63.12 Aligned_cols=84 Identities=19% Similarity=0.256 Sum_probs=60.9
Q ss_pred EEEEEeeehhh-hhh---ccceeEEEecCCeEEEECCCCCeeeeeeeccCCCCceEEEE------cCCCcEEEEcCC---
Q 011287 398 VLMISMVKKLQ-KLT---SKKVQLILTNKPKLIYVDPSKLVVKGNIIWSDNSNDLSIQV------SSPSHFKIVTPK--- 464 (489)
Q Consensus 398 i~~~g~~~k~~-g~~---~k~r~~~lt~~p~l~y~d~~~~~~kg~i~~~~~~~~~~~~~------~~~~~f~i~~p~--- 464 (489)
||..||+.-.. |+. .|+||||||+.-..+|.|....+.||.|||.. +++.. +++..|.+.-|.
T Consensus 1 virkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~eeKE~kyilpLdn----Lk~Rdve~gf~sk~~~FeLfnpd~rn 76 (110)
T cd01256 1 VIRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDEEKEKKYMLPLDG----LKLRDIEGGFMSRNHKFALFYPDGRN 76 (110)
T ss_pred CeeeeeEEeeccceecCCCcceEEEEecceeeeecccccccccceeeccc----cEEEeecccccCCCcEEEEEcCcccc
Confidence 35677776544 222 69999999999999999999999999999976 44433 445788887553
Q ss_pred -----ceEEEE-cCCccHHHHHHHHHH
Q 011287 465 -----KVLSFE-DAKQRASQWKKAIEA 485 (489)
Q Consensus 465 -----r~y~~~-d~~~~~~~W~~~i~~ 485 (489)
|+-.|. +...+.+.|...+-.
T Consensus 77 vykd~k~lel~~~~~e~vdswkasflr 103 (110)
T cd01256 77 VYKDYKQLELGCETLEEVDSWKASFLR 103 (110)
T ss_pred cccchheeeecCCCHHHHHHHHHHHHh
Confidence 344455 344788999877644
No 500
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=98.04 E-value=2.9e-07 Score=104.43 Aligned_cols=250 Identities=14% Similarity=0.035 Sum_probs=165.2
Q ss_pred CCCCeEEeeEEeeeCceEEEEEEEcCCCcEEEEEEee---cccccchhHHHHHHHHHHHHHhCCCCCccEEEEEEEc--C
Q 011287 43 SIQDFELGKIYGVGSYSKVVRAKKIDTGTVYALKIMD---KKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQD--T 117 (489)
Q Consensus 43 ~~~dy~~~~~LG~G~~g~Vy~a~~~~tg~~vAiK~~~---k~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~--~ 117 (489)
.+.++++.--+|-|.++.--.-+.+.. -+.+|+.+ -....+. ..+....|++-++...|+++...+.-..+ .
T Consensus 1227 ~~e~~EV~l~i~~~~~~R~k~Lr~kid--~Fk~~I~ke~d~e~LseP-lkemll~e~de~~~~~h~~~~~~p~rI~ps~s 1303 (2724)
T KOG1826|consen 1227 AMEHSEVNLGISNHFHFRNKWLRSKID--WFKFSIYKEYDFENLSEP-LKEMLLSERDELREAKHYLTEVDPLRIPPSES 1303 (2724)
T ss_pred HhhhhheeeecccceeeccchHhhhhc--eeEEEeehhhhHHHHhhH-HHHhhhhhhhhhhhhhceeeecccccCCCCCC
Confidence 456667666666666654322222222 23444432 1222222 23344456777777889998877665543 3
Q ss_pred CEEEEEEeccCCCChHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC-C----cEeeccCCCCeeeCCCCCEEEee
Q 011287 118 FSLYMALESCEGGELFDQITSKG----HLSEDEARFYTAEVVDALEYIHSM-G----LIHRDIKPENLLLTADGHIKIAD 188 (489)
Q Consensus 118 ~~lylV~E~~~gg~L~~~l~~~~----~l~e~~~~~i~~qil~aL~~LH~~-g----IiHrDLKpeNILl~~~g~ikL~D 188 (489)
...|.+++||.+|.+++.|.+.- .++..-+.....+.+.+..-+|+. + .+|+++|+-|.+|..+..+++.+
T Consensus 1304 ~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk 1383 (2724)
T KOG1826|consen 1304 TEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGK 1383 (2724)
T ss_pred hHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccc
Confidence 45689999999999999997642 233333333333436666666654 2 68999999999999999999999
Q ss_pred ccCccccCCccccccCCCCCCCCccceecCCcCCChhhhcCCCCCCCCcchhhhHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 011287 189 FGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDTSEWLIFQRII 268 (489)
Q Consensus 189 FG~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~sDiwSLG~ilyelltG~~PF~~~~~~~~~~~i~ 268 (489)
+|+.+...+. ....+..++++.|++|++.+.-.++.++|+|.+|+-+|....|..+|.. ..+.++
T Consensus 1384 ~gLdKIknp~----------~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~fi~-----flq~~L 1448 (2724)
T KOG1826|consen 1384 GGLDKIKNPV----------LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYFIF-----FLQPAL 1448 (2724)
T ss_pred cccccccCch----------HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHHH-----HHHHHH
Confidence 9999843321 2345577889999999999998899889999999999999999888744 333444
Q ss_pred hcC------CCCCCCCCHHHHHHHHHhhccCCCCCCCCCCCCHHHHhcCCCCC
Q 011287 269 ARD------IRFPNYFSDAARDLIDRLLDVDPSGRPGAGPGGYAVLKMHPFFK 315 (489)
Q Consensus 269 ~~~------~~~p~~~~~~~~~Li~~~L~~dP~~R~t~~~~~~~~l~~hpff~ 315 (489)
++. .+.+...|.++-.....+|-..-..||+- ...+.-+.|.
T Consensus 1449 kgiidn~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~q-----~isls~d~~a 1496 (2724)
T KOG1826|consen 1449 KGIIDNHTFFSIEKLKPGDANVEALHRLLWKYMERPGQ-----YISLSRDHFA 1496 (2724)
T ss_pred cCcccccccccccccCCCcccHHHHHHHHHHhhhcchh-----hhhccccccc
Confidence 432 23444456666666666666677788876 4555555553
Done!