BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011289
(489 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1UUY|A Chain A, Structure Of A Molybdopterin-Bound Cnx1g Domain Links
Molybdenum And Copper Metabolism
Length = 167
Score = 298 bits (763), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 160/163 (98%)
Query: 289 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 348
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 349 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 408
+WSD+D+MDLILTLGGTGFTPRDVTPEATK++IERETPGLL+VMMQESLK+TPFAML+RS
Sbjct: 65 KWSDVDEMDLILTLGGTGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLARS 124
Query: 409 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 451
AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR
Sbjct: 125 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 167
>pdb|1O8Q|A Chain A, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|B Chain B, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|C Chain C, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|D Chain D, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|E Chain E, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|F Chain F, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|G Chain G, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
pdb|1O8Q|H Chain H, The Active Site Of The Molybdenum Cofactor Biosenthetic
Protein Domain Cnx1g
Length = 167
Score = 298 bits (763), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 160/163 (98%)
Query: 289 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 348
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 349 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 408
+WSD+D+MDLILTLGGTGFTPRDVTPEATK++IERETPGLL+VMMQE+LK+TPFAMLSRS
Sbjct: 65 KWSDVDEMDLILTLGGTGFTPRDVTPEATKKVIERETPGLLFVMMQEALKITPFAMLSRS 124
Query: 409 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 451
AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR
Sbjct: 125 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 167
>pdb|1O8N|A Chain A, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
pdb|1O8N|B Chain B, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
pdb|1O8N|C Chain C, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
Length = 167
Score = 298 bits (762), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 159/163 (97%)
Query: 289 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 348
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 349 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 408
+WSD+D+MDLILTLGG GFTPRDVTPEATK++IERETPGLL+VMMQESLK+TPFAMLSRS
Sbjct: 65 KWSDVDEMDLILTLGGAGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLSRS 124
Query: 409 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 451
AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR
Sbjct: 125 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 167
>pdb|1O8O|A Chain A, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
pdb|1O8O|B Chain B, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
pdb|1O8O|C Chain C, The Active Site Of The Molybdenum Cofactor Biosynthetic
Protein Domain Cnx1g
Length = 167
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/163 (87%), Positives = 159/163 (97%)
Query: 289 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 348
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 349 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 408
+WSD+D+MDLILTLGG GFTPRDVTPEATK++IERETPGLL+VMMQESLK+TPFAMLSRS
Sbjct: 65 KWSDVDEMDLILTLGGDGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLSRS 124
Query: 409 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 451
AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR
Sbjct: 125 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKR 167
>pdb|1UUX|A Chain A, Structure Of A Molybdopterin-Bound Cnx1g Domain Links
Molybdenum And Copper Metabolism
Length = 163
Score = 289 bits (739), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 139/158 (87%), Positives = 155/158 (98%)
Query: 289 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 348
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 349 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 408
+WSD+D+MDLILTLGGTGFTPRDVTPEATK++IERETPGLL+VMMQESLK+TPFAMLSRS
Sbjct: 65 KWSDVDEMDLILTLGGTGFTPRDVTPEATKKVIERETPGLLFVMMQESLKITPFAMLSRS 124
Query: 409 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQI 446
AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQI
Sbjct: 125 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQI 162
>pdb|1EAV|A Chain A, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|B Chain B, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|C Chain C, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|D Chain D, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|E Chain E, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|F Chain F, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|G Chain G, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
pdb|1EAV|H Chain H, Crystal Structures Of Human Gephyrin And Plant Cnx1 G
Domains - Comparative Analysis And Functional
Implications
Length = 162
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 133/158 (84%), Positives = 149/158 (94%)
Query: 289 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 348
E+ VAILTVSDTV++GAGPDRSGPRAVSVV+SSSEKLGGAKVVAT VVPD+V +IK++L+
Sbjct: 5 EYKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQ 64
Query: 349 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 408
+WSD+D+ DLILTLGGTGFTPRDVTPEATK++IERETPGLL+V QESLK+TPFA LSRS
Sbjct: 65 KWSDVDEXDLILTLGGTGFTPRDVTPEATKKVIERETPGLLFVXXQESLKITPFAXLSRS 124
Query: 409 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQI 446
AAGIRGSTLIIN PGNPNAVAEC EALLPALKHALKQI
Sbjct: 125 AAGIRGSTLIINXPGNPNAVAECXEALLPALKHALKQI 162
>pdb|2FTS|A Chain A, Crystal Structure Of The Glycine Receptor-Gephyrin Complex
pdb|2FU3|A Chain A, Crystal Structure Of Gephyrin E-Domain
pdb|2FU3|B Chain B, Crystal Structure Of Gephyrin E-Domain
Length = 419
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 148/234 (63%), Gaps = 15/234 (6%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V+V + P +AV+STG+EL+ P L G+IRDSNR+ LLA + I+LGIV D+
Sbjct: 176 VEVNKFPVVAVMSTGNELLNPEDDLLP-GKIRDSNRSTLLATIQEHGYPTINLGIVGDNP 234
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQ--KKGTIYFNKVCMKPGKPLTFA 120
++L L+ S D+++TSGGVSMG+KD++K +L I+F +V MKPG P TFA
Sbjct: 235 DDLLNALNEGISRA-DVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFA 293
Query: 121 EINIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHLLRVPARICQP 180
++I V KI+ F LPGNPVS +V +L++VPA+R + G +P + AR+
Sbjct: 294 TLDID-----GVRKII-FALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCD 347
Query: 181 LKTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLELP 234
+K D RPE+HR IL W + A+STG+QMSSRL+SM+SAN LL LP
Sbjct: 348 VKLDP-RPEYHRCILTWHHQEPLPW----AQSTGNQMSSRLMSMRSANGLLMLP 396
>pdb|1T3E|A Chain A, Structural Basis Of Dynamic Glycine Receptor Clustering
pdb|1T3E|B Chain B, Structural Basis Of Dynamic Glycine Receptor Clustering
Length = 421
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/234 (45%), Positives = 148/234 (63%), Gaps = 15/234 (6%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V+V + P +AV+STG+EL+ P L G+IRDSNR+ LLA + I+LGIV D+
Sbjct: 178 VEVNKFPVVAVMSTGNELLNPEDDLLP-GKIRDSNRSTLLATIQEHGYPTINLGIVGDNP 236
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQ--KKGTIYFNKVCMKPGKPLTFA 120
++L L+ S D+++TSGGVSMG+KD++K +L I+F +V MKPG P TFA
Sbjct: 237 DDLLNALNEGISRA-DVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFA 295
Query: 121 EINIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHLLRVPARICQP 180
++I V KI+ F LPGNPVS +V +L++VPA+R + G +P + AR+
Sbjct: 296 TLDID-----GVRKII-FALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCD 349
Query: 181 LKTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLELP 234
+K D RPE+HR IL W + A+STG+QMSSRL+SM+SAN LL LP
Sbjct: 350 VKLDP-RPEYHRCILTWHHQEPLPW----AQSTGNQMSSRLMSMRSANGLLMLP 398
>pdb|1JLJ|A Chain A, 1.6 Angstrom Crystal Structure Of The Human Neuroreceptor
Anchoring And Molybdenum Cofactor Biosynthesis Protein
Gephyrin
pdb|1JLJ|B Chain B, 1.6 Angstrom Crystal Structure Of The Human Neuroreceptor
Anchoring And Molybdenum Cofactor Biosynthesis Protein
Gephyrin
pdb|1JLJ|C Chain C, 1.6 Angstrom Crystal Structure Of The Human Neuroreceptor
Anchoring And Molybdenum Cofactor Biosynthesis Protein
Gephyrin
Length = 189
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Query: 289 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 348
+ V +LTVSD+ DRSG +V S L G + A +VPD++ +IKE L
Sbjct: 14 QIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPS--LLGGTISAYKIVPDEIEEIKETLI 71
Query: 349 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 408
W D +++LILT GGTGF PRDVTPEATKE+IERE PG+ M+ SL VTP MLSR
Sbjct: 72 DWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRP 131
Query: 409 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIK 447
GIRG TLIIN+PG+ EC + +LPAL HA+ ++
Sbjct: 132 VCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLR 170
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 24/118 (20%)
Query: 57 IVRDDEEELEKTL-DNAFSAGIDILLTSGGVSMGDKDF----VKPLLQKKGTIYFNKVCM 111
IV D+ EE+++TL D ++++LT+GG +D K +++++
Sbjct: 58 IVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREA--------- 108
Query: 112 KPGKPLT--FAEINIKPTDDV------MVNKILAFGLPGNPVSCIVCFHLYIVPAIRH 161
PG L +N+ P + + K L LPG+ CF +I+PA+ H
Sbjct: 109 -PGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQ-FILPALPH 164
>pdb|1IHC|A Chain A, X-Ray Structure Of Gephyrin N-Terminal Domain
Length = 188
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Query: 289 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 348
+ V +LTVSD+ DRSG +V S L G + A +VPD++ +IKE L
Sbjct: 14 QIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPS--LLGGTISAYKIVPDEIEEIKETLI 71
Query: 349 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRS 408
W D +++LILT GGTGF PRDVTPEATKE+IERE PG+ M+ SL VTP MLSR
Sbjct: 72 DWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRP 131
Query: 409 AAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIK 447
GIRG TLIIN+PG+ EC + +LPAL HA+ ++
Sbjct: 132 VCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLR 170
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 24/118 (20%)
Query: 57 IVRDDEEELEKTL-DNAFSAGIDILLTSGGVSMGDKDF----VKPLLQKKGTIYFNKVCM 111
IV D+ EE+++TL D ++++LT+GG +D K +++++
Sbjct: 58 IVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREA--------- 108
Query: 112 KPGKPLT--FAEINIKPTDDV------MVNKILAFGLPGNPVSCIVCFHLYIVPAIRH 161
PG L +N+ P + + K L LPG+ CF +I+PA+ H
Sbjct: 109 -PGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQ-FILPALPH 164
>pdb|2IS8|A Chain A, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
pdb|2IS8|B Chain B, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
pdb|2IS8|C Chain C, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
pdb|3MCH|A Chain A, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
pdb|3MCH|B Chain B, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
pdb|3MCH|C Chain C, Crystal Structure Of The Molybdopterin Biosynthesis Enzyme
Moab (Ttha0341) From Thermus Theromophilus Hb8
Length = 164
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 99/159 (62%), Gaps = 5/159 (3%)
Query: 290 FSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRR 349
F V ILTVSD G D + V+ G +V A ++VPD+ IK+VLR
Sbjct: 2 FRVGILTVSDKGFRGERQDTTHLAIREVLAG-----GPFEVAAYELVPDEPPMIKKVLRL 56
Query: 350 WSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSA 409
W+D + +DLILT GGTG PRD TPEAT+EL++RE PGL +M L+ TP A LSR
Sbjct: 57 WADREGLDLILTNGGTGLAPRDRTPEATRELLDREVPGLAELMRLVGLRKTPMAALSRGV 116
Query: 410 AGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKG 448
AG+RG TLI+N+PG+P E +EA+LP L HAL + G
Sbjct: 117 AGVRGRTLILNLPGSPKGARESLEAVLPVLPHALSLVTG 155
>pdb|1FC5|A Chain A, Crystal Structure Of Molybdopterin Biosynthesis Moea
Protein
pdb|1FC5|B Chain B, Crystal Structure Of Molybdopterin Biosynthesis Moea
Protein
Length = 411
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLXLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQQ|A Chain A, Moea R137q
pdb|2NQQ|B Chain B, Moea R137q
pdb|2NQQ|C Chain C, Moea R137q
pdb|2NQQ|D Chain D, Moea R137q
Length = 411
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|1G8L|A Chain A, Crystal Structure Of Escherichia Coli Moea
pdb|1G8L|B Chain B, Crystal Structure Of Escherichia Coli Moea
pdb|1G8R|A Chain A, Moea
pdb|1G8R|B Chain B, Moea
Length = 411
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQR|A Chain A, Moea D142n
pdb|2NQR|B Chain B, Moea D142n
Length = 411
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQK|A Chain A, Moea D59n Mutant
pdb|2NQK|B Chain B, Moea D59n Mutant
Length = 411
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQM|A Chain A, Moea T100a Mutant
pdb|2NQM|B Chain B, Moea T100a Mutant
Length = 411
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQN|A Chain A, Moea T100w
pdb|2NQN|B Chain B, Moea T100w
Length = 411
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQU|A Chain A, Moea E188q
pdb|2NQU|B Chain B, Moea E188q
Length = 411
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGD+L P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDQLQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NRO|A Chain A, Moea K279q
pdb|2NRO|B Chain B, Moea K279q
Length = 411
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 117/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ ++PGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIQPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQS|A Chain A, Moea E188a
pdb|2NQS|B Chain B, Moea E188a
Length = 411
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 116/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGD L P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDALQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NRS|A Chain A, Moea S371w
pdb|2NRS|B Chain B, Moea S371w
Length = 411
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 116/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGWHIFSSFSLGNCFIVL 386
>pdb|2NRP|A Chain A, Moea R350a
pdb|2NRP|B Chain B, Moea R350a
Length = 411
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 116/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+RDD
Sbjct: 172 VPVIRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQAGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2NQV|A Chain A, Moea D228a
pdb|2NQV|B Chain B, Moea D228a
Length = 411
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 116/232 (50%), Gaps = 18/232 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
V V R +A+ STGDEL P Q L GQI D+NR + Q C++I+LGI+R D
Sbjct: 172 VPVIRKVRVALFSTGDELQLPG-QPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRADP 230
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
L A S D++++SGGVS+G+ D+ K +L++ G I F K+ +KPGKP F ++
Sbjct: 231 HALRAAFIEADSQA-DVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKL 289
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHL-LRVPARICQPL 181
+ N GLPGNPVS + F+ + P + LSG L R R L
Sbjct: 290 S---------NSWFC-GLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRL 339
Query: 182 KTDRVRPEFHRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLEL 233
K R +F R +L+ A DG +TGHQ S S N + L
Sbjct: 340 KKTPGRLDFQRGVLQRNA-DGE----LEVTTTGHQGSHIFSSFSLGNCFIVL 386
>pdb|2PBQ|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|2PBQ|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|2PBQ|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|2QQ1|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|2QQ1|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|2QQ1|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|2QQ1|D Chain D, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|2QQ1|E Chain E, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|2QQ1|F Chain F, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCI|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|3MCI|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|3MCI|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) From Aquifex Aeolicus Vf5
pdb|3MCJ|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCJ|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCJ|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCJ|D Chain D, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCJ|E Chain E, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
pdb|3MCJ|F Chain F, Crystal Structure Of Molybdenum Cofactor Biosynthesis
(Aq_061) Other Form From Aquifex Aeolicus Vf5
Length = 178
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 97/167 (58%), Gaps = 3/167 (1%)
Query: 292 VAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWS 351
+ ++T+SD + G D SG ++++ + + V V+PD+ I++ L +
Sbjct: 8 IGVVTISDRASKGIYEDISGK---AIIDYLKDVIITPFEVEYRVIPDERDLIEKTLIELA 64
Query: 352 DIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSAAG 411
D LILT GGTG PRDVTPEAT+ + E+ PG +M Q SLK P A+LSR AG
Sbjct: 65 DEKGCSLILTTGGTGPAPRDVTPEATEAVCEKMLPGFGELMRQVSLKQVPTAILSRQTAG 124
Query: 412 IRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPRHV 458
IRGS LI+N+PG P ++ C++A++PA+ + + I G + P V
Sbjct: 125 IRGSCLIVNLPGKPQSIKVCLDAVMPAIPYCIDLIGGAYIDTDPNKV 171
>pdb|2F7W|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|2F7W|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|2F7W|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|2F7Y|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|2F7Y|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|2F7Y|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
Length = 177
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Query: 292 VAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWS 351
+ I+TVSD ++G D SG +++++ ++ L V+PD+ I+ L + +
Sbjct: 6 IGIVTVSDRASAGIYEDISGK---AIIDTLNDYLTSEWEPIYQVIPDEQDVIETTLIKXA 62
Query: 352 DIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSAAG 411
D LI+T GGTG RDVTPEAT+ + +R PG + ESLK P A+LSR AG
Sbjct: 63 DEQDCCLIVTTGGTGPAKRDVTPEATEAVCDRXXPGFGELXRAESLKFVPTAILSRQTAG 122
Query: 412 IRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKG 448
+RG +LI+N+PG P ++ EC++A+ PA+ + + +G
Sbjct: 123 LRGDSLIVNLPGKPKSIRECLDAVFPAIPYCIDLXEG 159
>pdb|3K6A|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|3K6A|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|3K6A|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|3K6A|D Chain D, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|3K6A|E Chain E, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
pdb|3K6A|F Chain F, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein Mog From Shewanella Oneidensis
Length = 180
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 94/157 (59%), Gaps = 3/157 (1%)
Query: 292 VAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWS 351
+ I+TVSD ++G D SG +++++ ++ L V+PD+ I+ L + +
Sbjct: 9 IGIVTVSDRASAGIYEDISGK---AIIDTLNDYLTSEWEPIYQVIPDEQDVIETTLIKXA 65
Query: 352 DIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSAAG 411
D LI+T GGTG RDVTPEAT+ + +R PG + ESLK P A+LSR AG
Sbjct: 66 DEQDCCLIVTTGGTGPAKRDVTPEATEAVCDRXXPGFGELXRAESLKFVPTAILSRQTAG 125
Query: 412 IRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKG 448
+RG +LI+N+PG P ++ EC++A+ PA+ + + +G
Sbjct: 126 LRGDSLIVNLPGKPKSIRECLDAVFPAIPYCIDLXEG 162
>pdb|1UZ5|A Chain A, The Crystal Structure Of Molybdopterin Biosynthesis Moea
Protein From Pyrococcus Horikosii
Length = 402
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
Query: 3 VKVYRTPTIAVLSTGDELVEPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDE 62
VKV+R P +AV+STG+E+V P + L GQI D N L A + + I +G+ RDD+
Sbjct: 175 VKVFRKPKVAVISTGNEIVPPGNE-LKPGQIYDINGRALCDAINELGGEGIFMGVARDDK 233
Query: 63 EELEKTLDNAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEI 122
E L+ ++ A + G D+++ SGG S G KD ++++ G + + + ++PGKP I
Sbjct: 234 ESLKALIEKAVNVG-DVVVISGGASGGTKDLTASVIEELGEVKVHGIAIQPGKPTIIGVI 292
Query: 123 NIKPTDDVMVNKILAFGLPGNPVSCIVCFHLYIVP 157
KP FGLPG P SC+ F L +VP
Sbjct: 293 KGKPV----------FGLPGYPTSCLTNFTLLVVP 317
>pdb|3OI9|A Chain A, Crystal Structure Of Molybdenum Cofactor Synthesis Domain
From Mycobacterium Avium
Length = 164
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 288 TEFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVL 347
T S ++ S +SG DR GP + +VVA D + E L
Sbjct: 6 TTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVA------DGSPVGEAL 59
Query: 348 RRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSR 407
R+ D D +D+ILT GGTG P D TP+ T +++ PGL + Q L P ++LSR
Sbjct: 60 RKAID-DDVDVILTSGGTGIAPTDSTPDQTVAVVDYLIPGLAEAIRQSGLPKVPTSVLSR 118
Query: 408 SAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPR 456
G+ G TLI+N+PG+P V + + L L HAL Q+ G + HPR
Sbjct: 119 GVCGVAGQTLIVNLPGSPGGVRDGLGVLAGVLDHALDQLAG---KDHPR 164
>pdb|3PZY|A Chain A, Crystal Structure Of Molybdopterin Biosynthesis Mog
Protein From Mycobacterium Paratuberculosis
Length = 164
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 288 TEFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVL 347
T S ++ S +SG DR GP + +VVA D + E L
Sbjct: 6 TTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVVA------DGSPVGEAL 59
Query: 348 RRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSR 407
R+ D D +D+ILT GGTG P D TP+ T +++ PGL + + L P ++LSR
Sbjct: 60 RKAID-DDVDVILTSGGTGIAPTDSTPDQTVAVVDYLIPGLAEAIRRSGLPKVPTSVLSR 118
Query: 408 SAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPR 456
G+ G TLI+N+PG+P V + + L L HAL Q+ G + HPR
Sbjct: 119 GVCGVAGQTLIVNLPGSPGGVRDGLGVLAGVLDHALDQLAG---KDHPR 164
>pdb|2G4R|A Chain A, Anomalous Substructure Of Moga
pdb|2G4R|B Chain B, Anomalous Substructure Of Moga
pdb|2G4R|C Chain C, Anomalous Substructure Of Moga
Length = 160
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Query: 356 MDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSAAGIRGS 415
+D+I+T GGTG +P D TPE T +++ PGL + + L P ++LSR G+ G
Sbjct: 63 VDVIITSGGTGISPTDTTPEHTVAVLDYVIPGLADAIRRSGLPKVPTSVLSRGVCGVAGR 122
Query: 416 TLIINMPGNPNAVAECMEALLPALKHALKQIKGDKREKHPR 456
TLIIN+PG+P V + + L L HAL+QI G HPR
Sbjct: 123 TLIINLPGSPGGVRDGLGVLADVLDHALEQIAGG---DHPR 160
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 41 LLAAAMQQHCKLIDLGIVRDDEEELEKTLDNAFSAGIDILLTSGGVSMGDKD 92
++A ++QH V D + + L +A +AG+D+++TSGG + D
Sbjct: 27 IIAGWLEQHGFSSVQPQVVADGNPVGEALHDAVNAGVDVIITSGGTGISPTD 78
>pdb|1DI6|A Chain A, 1.45 A Crystal Structure Of The Molybdenumm Cofactor
Biosynthesis Protein Moga From Escherichia Coli
pdb|1DI7|A Chain A, 1.60 Angstrom Crystal Structure Of The Molybdenum Cofactor
Biosynthesis Protein Moga From Escherichia Coli
Length = 195
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 290 FSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRR 349
+ ++++SD +SG D+ P + S+ L + T ++PD+ I++ L
Sbjct: 4 LRIGLVSISDRASSGVYQDKGIPALEEWLTSA---LTTPFELETRLIPDEQAIIEQTLCE 60
Query: 350 WSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSA 409
D L+LT GGTG RDVTP+AT + +RE PG M Q SL P A+LSR
Sbjct: 61 LVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQMRQISLHFVPTAILSRQV 120
Query: 410 AGIRGSTLIINMPGNPNAVAECMEAL 435
IR LI+N+PG P ++ E +E +
Sbjct: 121 GVIRKQALILNLPGQPKSIKETLEGV 146
>pdb|3RFQ|A Chain A, Crystal Structure Of Pterin-4-Alpha-Carbinolamine
Dehydratase Moab2 From Mycobacterium Marinum
pdb|3RFQ|B Chain B, Crystal Structure Of Pterin-4-Alpha-Carbinolamine
Dehydratase Moab2 From Mycobacterium Marinum
pdb|3RFQ|C Chain C, Crystal Structure Of Pterin-4-Alpha-Carbinolamine
Dehydratase Moab2 From Mycobacterium Marinum
Length = 185
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 308 DRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWSDIDKMDLILTLGGTGF 367
D SGP ++ + + G V D V I+ L + I +DL++++GGTG
Sbjct: 48 DHSGPLVTELLTEAGFVVDGVVAVEADEV-----DIRNALN-TAVIGGVDLVVSVGGTGV 101
Query: 368 TPRDVTPEATKELIERETPGLLYVMMQESLKVTPF-AMLSRSAAGIRGSTLIINMPGNPN 426
TPRDVTPE+T+E+++RE G+ + L A LSR AG+ GSTL++N+ G+
Sbjct: 102 TPRDVTPESTREILDREILGIAEAIRASGLSAGIIDAGLSRGLAGVSGSTLVVNLAGSRY 161
Query: 427 AVAECMEALLPALKHALKQIK 447
AV + M L P H + Q+
Sbjct: 162 AVRDGMATLNPLAAHIIGQLS 182
>pdb|3IWT|A Chain A, Structure Of Hypothetical Molybdenum Cofactor Biosynthesis
Protein B From Sulfolobus Tokodaii
pdb|3IWT|B Chain B, Structure Of Hypothetical Molybdenum Cofactor Biosynthesis
Protein B From Sulfolobus Tokodaii
pdb|3IWT|C Chain C, Structure Of Hypothetical Molybdenum Cofactor Biosynthesis
Protein B From Sulfolobus Tokodaii
Length = 178
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 79/129 (61%), Gaps = 10/129 (7%)
Query: 326 GGAKVVATDVVPDDVGKIKEVLRRWSD---IDKMDLILTLGGTGFTPRDVTPEATKELIE 382
G K++ +VPDD KIK +L+ ++D ID++D+I++ GGTG++P D+T E ++L +
Sbjct: 52 NGHKIIGYSLVPDD--KIK-ILKAFTDALSIDEVDVIISTGGTGYSPTDITVETIRKLFD 108
Query: 383 RETPGLLYVMMQESL---KVTPFAMLSRSAAGIRGSTLIINMPGNPNAVAECM-EALLPA 438
RE G V S +V A L++++AGI G ++ +PG+P+AV + E +LP
Sbjct: 109 REIEGFSDVFRLVSFNDPEVKAAAYLTKASAGIIGKKIVYLLPGSPDAVKLALKELILPE 168
Query: 439 LKHALKQIK 447
+ H + ++
Sbjct: 169 VGHLVYLVR 177
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 26 QCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEELEKTLDNAFSAG-IDILLTSG 84
+ L + I D + ++ ++ K+I +V DD+ ++ K +A S +D+++++G
Sbjct: 30 KLLKKEPIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTG 89
Query: 85 GVSMGDKDF----VKPLLQKK--------GTIYFNKVCMKPGKPLTFAEINIKPTDDVMV 132
G D ++ L ++ + FN +K LT A I +
Sbjct: 90 GTGYSPTDITVETIRKLFDREIEGFSDVFRLVSFNDPEVKAAAYLTKASAGI-------I 142
Query: 133 NKILAFGLPGNPVSCIVCFHLYIVPAIRHL 162
K + + LPG+P + + I+P + HL
Sbjct: 143 GKKIVYLLPGSPDAVKLALKELILPEVGHL 172
>pdb|1XI8|A Chain A, Molybdenum Cofactor Biosynthesis Protein From Pyrococcus
Furiosus Pfu-1657500-001
pdb|1XI8|B Chain B, Molybdenum Cofactor Biosynthesis Protein From Pyrococcus
Furiosus Pfu-1657500-001
Length = 403
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 31/224 (13%)
Query: 12 AVLSTGDELV-EPTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEELEKTLD 70
++ TG ELV EP+ + ++G+I D+N ML A + + I G+V D+E+ + L+
Sbjct: 193 GIIITGSELVQEPSLEEFEKGKIVDTNSIMLSALVERYFGEPILYGVVPDNEDLIRSALE 252
Query: 71 NAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIKPTDDV 130
A D++L +GG + GD D+ + + F+ ++PG+P+ + E
Sbjct: 253 KA-KRECDLVLITGGSAFGDMDYAHKFV----NLLFHGTTIRPGRPIGYGE--------- 298
Query: 131 MVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHLLRVPARICQPLKTDRVRPEF 190
F + G PV+ FHL++ A+ L G A + ++V A + + + R EF
Sbjct: 299 -----RVFVMSGYPVAVFTQFHLFVKHALAKLVG-AKDYEVKVRAVLEDDVPSQLGRYEF 352
Query: 191 HRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLELP 234
R + R DG A+ + S + S+ +NA L +P
Sbjct: 353 VRVMYR----DGK------AKVIKKKGSGIISSLVQSNAYLVVP 386
>pdb|1WU2|A Chain A, Crystal Structure Of Molybdopterin Biosynthesis Moea
Protein From Pyrococcus Horikoshii Ot3
pdb|1WU2|B Chain B, Crystal Structure Of Molybdopterin Biosynthesis Moea
Protein From Pyrococcus Horikoshii Ot3
Length = 396
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 31/224 (13%)
Query: 12 AVLSTGDELVE-PTTQCLDRGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEELEKTLD 70
++ TG EL+E P+ + G+I ++N L + + I G++ DDE +++TL+
Sbjct: 186 GIIITGSELIEEPSEEGFKEGKIVETNSIXLQGLVEKFFGEPILYGVLPDDESIIKETLE 245
Query: 71 NAFSAGIDILLTSGGVSMGDKDFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIKPTDDV 130
A + DI+L +GG + GDKD+ + + F+ +KPG+P + E
Sbjct: 246 KAKNE-CDIVLITGGSAFGDKDYAHKFV----NLLFHGTTIKPGRPFGYGE--------- 291
Query: 131 MVNKILAFGLPGNPVSCIVCFHLYIVPAIRHLSGWANPHLLRVPARICQPLKTDRVRPEF 190
F G PVS F+L++ A+ G N + ++V A + + + R EF
Sbjct: 292 -----KVFIXSGYPVSVFAQFNLFVKHALAKXVGAQN-YEVKVKAILQDDIPSQLGRYEF 345
Query: 191 HRAILRWKANDGSGSSGFVAESTGHQMSSRLLSMKSANALLELP 234
++ +G +A + S L S+ ++NA LE+P
Sbjct: 346 ----IKIYYENG------IARVIKKKGSGILSSLLASNAYLEIP 379
>pdb|1Y5E|A Chain A, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein B
pdb|1Y5E|B Chain B, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein B
pdb|1Y5E|C Chain C, Crystal Structure Of Molybdenum Cofactor Biosynthesis
Protein B
Length = 169
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 289 EFSVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLR 348
E I+T+SDT D+SG ++ K G KV + ++V DD I++ +
Sbjct: 13 EVRCKIVTISDTRTEET--DKSGQLLHELL-----KEAGHKVTSYEIVKDDKESIQQAVL 65
Query: 349 RWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGL--LYVMMQESLKVTPFAMLS 406
+ +D++LT GGTG T RDVT EA L+++E G L+ + + A LS
Sbjct: 66 AGYHKEDVDVVLTNGGTGITKRDVTIEAVSALLDKEIVGFGELFRXISYLEDIGSSAXLS 125
Query: 407 RSAAGIRGSTLIINMPGNPNAVAECMEAL-LPALKH 441
R+ G G ++ + PG+ AV L LP L H
Sbjct: 126 RAIGGTIGRKVVFSXPGSSGAVRLAXNKLILPELGH 161
>pdb|1MKZ|A Chain A, Crystal Structure Of Moab Protein At 1.6 A Resolution.
pdb|1MKZ|B Chain B, Crystal Structure Of Moab Protein At 1.6 A Resolution
Length = 172
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 288 TEF---SVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIK 344
TEF +AILTVS+ G D SG + +S+ E G VV +V ++ I+
Sbjct: 6 TEFIPTRIAILTVSNR--RGEEDDTSGH---YLRDSAQE--AGHHVVDKAIVKENRYAIR 58
Query: 345 EVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESL-KVTPFA 403
+ W D + ++L GGTG T D PEA L +RE G V S ++
Sbjct: 59 AQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGFGEVFRXLSFEEIGTST 118
Query: 404 MLSRSAAGIRGSTLIINMPGNPNAVAECMEALL 436
+ SR+ AG+ TLI+ PG+ A E ++
Sbjct: 119 LQSRAVAGVANKTLILAXPGSTKACRTAWENII 151
>pdb|1R2K|B Chain B, Crystal Structure Of Moab From Escherichia Coli
pdb|1R2K|A Chain A, Crystal Structure Of Moab From Escherichia Coli
Length = 169
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 288 TEF---SVAILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIK 344
TEF +AILTVS+ G D SG + +S+ E G VV +V ++ I+
Sbjct: 5 TEFIPTRIAILTVSNR--RGEEDDTSGH---YLRDSAQE--AGHHVVDKAIVKENRYAIR 57
Query: 345 EVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESL-KVTPFA 403
+ W D + ++L GGTG T D PEA L +RE G V S ++
Sbjct: 58 AQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGFGEVFRXLSFEEIGTST 117
Query: 404 MLSRSAAGIRGSTLIINMPGNPNAVAECMEALL 436
+ SR+ AG+ TLI PG+ A E ++
Sbjct: 118 LQSRAVAGVANKTLIFAXPGSTKACRTAWENII 150
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 30 RGQIRDSNRAMLLAAAMQQHCKLIDLGIVRDDEEELEKTLDNAFSAGIDI---LLTSG-G 85
RG+ D++ L +A + ++D IV+++ + + +A+ A D+ L+T G G
Sbjct: 21 RGEEDDTSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQV-SAWIASDDVQVVLITGGTG 79
Query: 86 VSMGDK--DFVKPLLQKKGTIYFNKVCMKPGKPLTFAEINIKPTDDVMV----NKILAFG 139
++ GD+ + + PL ++ F +V + L+F EI V NK L F
Sbjct: 80 LTEGDQAPEALLPLFDRE-VEGFGEVF----RXLSFEEIGTSTLQSRAVAGVANKTLIFA 134
Query: 140 LPGNPVSCIVCFHLYIVPAIRHLSGWAN--PHL 170
PG+ +C + I P + + N PHL
Sbjct: 135 XPGSTKACRTAWENIIAPQLDARTRPCNFHPHL 167
>pdb|3TCR|A Chain A, Crystal Structure Of A Molybdopterin Biosynthesis Protein
From Mycobacterium Abscessus
pdb|3TCR|B Chain B, Crystal Structure Of A Molybdopterin Biosynthesis Protein
From Mycobacterium Abscessus
Length = 199
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 338 DDVGKIKEVLRRWSDIDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESL 397
+D+ +I+ + + I +DL++T+GGTG TPRDV PEAT+ L++RE G+ + L
Sbjct: 86 NDLSEIQNAVN-TAVIGGVDLVVTVGGTGVTPRDVAPEATQPLLDRELLGIAEAIRSSGL 144
Query: 398 KV-TPFAMLSRSAAGIRGSTLIINMPGNPNAVAECMEALLPALKHALKQIK 447
A LSR AGI GSTL++N+ G+ AV + M L P ++Q+
Sbjct: 145 AAGVTEAGLSRGVAGISGSTLVVNIAGSRAAVRDGMATLTPMAIQIIEQLS 195
>pdb|2G2C|A Chain A, Putative Molybdenum Cofactor Biosynthesis Protein From
Corynebacterium Diphtheriae
Length = 167
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 293 AILTVSDTVASGAGPDRSGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWSD 352
AI+ VSD +++G +++ P + + S + ++++ VVP+ + E +
Sbjct: 9 AIIVVSDRISTGTRENKALP-LLQRLXSDELQDYSYELISEVVVPEGYDTVVEAIATALK 67
Query: 353 IDKMDLILTLGGTGFTPRDVTPEATKELIERETPGLLYVMMQESLKVTPFAMLSRSAAGI 412
I+T GGTG ++ TPEAT I GL ++ T A LSR G+
Sbjct: 68 -QGARFIITAGGTGIRAKNQTPEATASFIHTRCEGLEQQILIHGSTHTHLAGLSRGIVGV 126
Query: 413 RG----STLIINMPGNPNAVAECMEALLPAL 439
G + LI+N P + + + + P +
Sbjct: 127 TGRDDHAALIVNAPSSSGGITDTWAVISPVI 157
>pdb|1QVR|A Chain A, Crystal Structure Analysis Of Clpb
pdb|1QVR|B Chain B, Crystal Structure Analysis Of Clpb
pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb
Length = 854
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 312 PRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWSDI 353
P+ + V + SEKL GA+ V +V +D+ E++ RW+ I
Sbjct: 498 PKLEAEVEALSEKLRGARFVRLEVTEEDIA---EIVSRWTGI 536
>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine
Dehydrogenase (Y137f) From Hyperthermophilic Archaeon
Thermoplasma Volcanium
pdb|3A9W|B Chain B, Crystal Structure Of L-Threonine Bound L-Threonine
Dehydrogenase (Y137f) From Hyperthermophilic Archaeon
Thermoplasma Volcanium
pdb|3AJR|A Chain A, Crystal Structure Of L-3-Hydroxynorvaline Bound
L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic
Archaeon Thermoplasma Volcanium
pdb|3AJR|B Chain B, Crystal Structure Of L-3-Hydroxynorvaline Bound
L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic
Archaeon Thermoplasma Volcanium
Length = 317
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 310 SGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWSDIDKMD 357
SG +V +EK G V+A+D+V D G IK + S+ D++D
Sbjct: 8 SGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEID 55
>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From
Hyperthermophilic Archaeon Thermoplasma Volcanium
pdb|3A1N|B Chain B, Crystal Structure Of L-Threonine Dehydrogenase From
Hyperthermophilic Archaeon Thermoplasma Volcanium
pdb|3A4V|A Chain A, Crystal Structure Of Pyruvate Bound L-Threonine
Dehydrogenase From Hyperthermophilic Archaeon
Thermoplasma Volcanium
pdb|3A4V|B Chain B, Crystal Structure Of Pyruvate Bound L-Threonine
Dehydrogenase From Hyperthermophilic Archaeon
Thermoplasma Volcanium
Length = 317
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 310 SGPRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWSDIDKMD 357
SG +V +EK G V+A+D+V D G IK + S+ D++D
Sbjct: 8 SGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEID 55
>pdb|4HSE|A Chain A, Crystal Structure Of Clpb Nbd1 In Complex With Guanidinium
Chloride And Adp
Length = 397
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 312 PRAVSVVNSSSEKLGGAKVVATDVVPDDVGKIKEVLRRWS 351
P+ + V + SEKL GA+ V +V +D+ E++ RW+
Sbjct: 361 PKLEAEVEALSEKLRGARFVRLEVTEEDIA---EIVSRWT 397
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,746,170
Number of Sequences: 62578
Number of extensions: 619567
Number of successful extensions: 1769
Number of sequences better than 100.0: 53
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1645
Number of HSP's gapped (non-prelim): 68
length of query: 489
length of database: 14,973,337
effective HSP length: 103
effective length of query: 386
effective length of database: 8,527,803
effective search space: 3291731958
effective search space used: 3291731958
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)